Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023925.t1 | XP_003624005.2 | 99.2 | 933 | 7 | 0 | 2 | 934 | 163 | 1095 | 0.00E+00 | 1862.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023925.t1 | Q69ZJ7 | 25.7 | 938 | 547 | 23 | 50 | 869 | 206 | 1111 | 3.6e-65 | 251.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023925.t1 | Q2HUD0 | 99.2 | 933 | 7 | 0 | 2 | 934 | 163 | 1095 | 0.0e+00 | 1862.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene023925 | MS.gene058638 | PPI |
| MS.gene054815 | MS.gene023925 | PPI |
| MS.gene023925 | MS.gene058639 | PPI |
| MS.gene058639 | MS.gene023925 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023925.t1 | MTR_7g078170 | 99.250 | 933 | 7 | 0 | 2 | 934 | 163 | 1095 | 0.0 | 1910 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene023925.t1 | AT3G61480 | 75.586 | 938 | 218 | 7 | 2 | 934 | 117 | 1048 | 0.0 | 1430 |
| MS.gene023925.t1 | AT3G61480 | 75.586 | 938 | 218 | 7 | 2 | 934 | 159 | 1090 | 0.0 | 1429 |
| MS.gene023925.t1 | AT5G28350 | 75.027 | 937 | 225 | 5 | 2 | 934 | 163 | 1094 | 0.0 | 1415 |
| MS.gene023925.t1 | AT5G28350 | 75.027 | 937 | 225 | 5 | 2 | 934 | 123 | 1054 | 0.0 | 1415 |
Find 203 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGCTTGATTTCAGAATTTC+TGG | 0.112517 | 7.1:+25563898 | None:intergenic |
| CTTACAGTTTGGTCTGTTTC+CGG | 0.166775 | 7.1:-25563194 | MS.gene023925:CDS |
| ACAAAATTGAGGAAGCTTTA+AGG | 0.179661 | 7.1:-25560466 | MS.gene023925:CDS |
| TGTCTTAGCAGAGGTGTTTC+TGG | 0.184088 | 7.1:-25562972 | MS.gene023925:CDS |
| AGAATTATTTCATTCTCTTT+TGG | 0.236149 | 7.1:-25563002 | MS.gene023925:CDS |
| GGCTGGAGAATTTCGCTTCC+GGG | 0.236572 | 7.1:-25558000 | MS.gene023925:CDS |
| CATATTGAACAGGCCAGTTT+TGG | 0.236778 | 7.1:+25562754 | None:intergenic |
| TTCAGGAAATCCTGATTTAC+AGG | 0.237546 | 7.1:-25562081 | MS.gene023925:intron |
| CTTTAACCCTTTCTTACTAA+TGG | 0.239865 | 7.1:+25563808 | None:intergenic |
| TACACCCGACAAGTGATTTA+TGG | 0.245935 | 7.1:-25562942 | MS.gene023925:CDS |
| ATCCTCCTGCTTAAAAGAAT+TGG | 0.258685 | 7.1:+25561275 | None:intergenic |
| TTAGCGGTTGCTGGTCTTCA+TGG | 0.264396 | 7.1:-25562705 | MS.gene023925:CDS |
| TTCGGTGAATTAACTCCTTC+AGG | 0.272367 | 7.1:-25562098 | MS.gene023925:CDS |
| ACCTGGTTCTTGTTTACATT+TGG | 0.288185 | 7.1:+25559694 | None:intergenic |
| CTGTGCTTTACGGTTATTAC+AGG | 0.289961 | 7.1:-25558744 | MS.gene023925:intron |
| TATGTGCTCTGTCAAATTTA+AGG | 0.292139 | 7.1:-25557378 | MS.gene023925:CDS |
| AAACTGTCTCCTCGATTTCT+AGG | 0.296872 | 7.1:-25558420 | MS.gene023925:CDS |
| GTCCATGCAATGCAACTAAC+AGG | 0.298367 | 7.1:+25563260 | None:intergenic |
| AAGCTTGTAGCATTTGTAAA+AGG | 0.300184 | 7.1:-25558169 | MS.gene023925:CDS |
| GAAAGCAAGCATTGGATAAA+AGG | 0.302012 | 7.1:-25558371 | MS.gene023925:intron |
| CAGAAGGATGTGGATCAAAT+TGG | 0.304255 | 7.1:+25564014 | None:intergenic |
| GGAGCTTTCGCTTCTTGATT+TGG | 0.304588 | 7.1:-25561588 | MS.gene023925:CDS |
| ATAATTTCACATGGAATATA+TGG | 0.308727 | 7.1:+25562120 | None:intergenic |
| TTTCTTATATTTCCCAAAAC+TGG | 0.311961 | 7.1:-25562767 | MS.gene023925:CDS |
| TTGCCGTTGGGTGGAAGTTA+AGG | 0.313742 | 7.1:-25563220 | MS.gene023925:CDS |
| ATGTCAACAATCCGTCAAAT+AGG | 0.316567 | 7.1:-25563161 | MS.gene023925:CDS |
| TGCCGTTGGGTGGAAGTTAA+GGG | 0.321137 | 7.1:-25563219 | MS.gene023925:CDS |
| ATGAAAAGATGGAGAGTCTT+TGG | 0.325656 | 7.1:-25562660 | MS.gene023925:CDS |
| TAAGGAATGGATAGTTGTTC+TGG | 0.325801 | 7.1:-25557360 | MS.gene023925:CDS |
| GATTCTTTATATGAGCTTGC+TGG | 0.326584 | 7.1:-25558615 | MS.gene023925:CDS |
| AGGCACTCAGTTTGATTTAG+TGG | 0.326832 | 7.1:-25558149 | MS.gene023925:intron |
| GAAGTTTCATGGTTAGATTA+TGG | 0.331835 | 7.1:-25561476 | MS.gene023925:CDS |
| TTACAGTTTGGTCTGTTTCC+GGG | 0.335436 | 7.1:-25563193 | MS.gene023925:CDS |
| CAACTCCACTATTCCTCTTC+TGG | 0.336976 | 7.1:+25563691 | None:intergenic |
| TAAGCAGGAGGATTTCTTGC+AGG | 0.337554 | 7.1:-25561265 | MS.gene023925:intron |
| CACAGCAGGACCCTCGAGTT+TGG | 0.339240 | 7.1:+25558775 | None:intergenic |
| TGATCTCCTACACAGTTCTA+TGG | 0.341833 | 7.1:-25564043 | MS.gene023925:intron |
| TGATTGAGCGTAGAAACTTT+TGG | 0.343789 | 7.1:+25563929 | None:intergenic |
| CGGCTGGAGAATTTCGCTTC+CGG | 0.345793 | 7.1:-25558001 | MS.gene023925:CDS |
| CACAGTTTCTTTGTATGACT+GGG | 0.346199 | 7.1:-25563636 | MS.gene023925:CDS |
| ATATTCCATGTGAAATTATT+CGG | 0.347311 | 7.1:-25562116 | MS.gene023925:CDS |
| TCGCTTCTTGATTTGGATGA+TGG | 0.354795 | 7.1:-25561581 | MS.gene023925:CDS |
| TGAGCCAGTACTGTGCTTTA+CGG | 0.355371 | 7.1:-25558754 | MS.gene023925:CDS |
| TCATGGTTTGGTTTAGCAAT+TGG | 0.355824 | 7.1:+25563119 | None:intergenic |
| CATGGGAATTCTGCACTTGA+TGG | 0.360396 | 7.1:+25560823 | None:intergenic |
| TTGATGGAAATGACATTCTC+TGG | 0.360667 | 7.1:+25560839 | None:intergenic |
| TGTGCATTTACCTGTAAATC+AGG | 0.368363 | 7.1:+25562071 | None:intergenic |
| CTAGGTACTCTGGAAAATTT+CGG | 0.370618 | 7.1:+25559620 | None:intergenic |
| CCTACTGCGCCATCTTCTTC+AGG | 0.378208 | 7.1:-25560761 | MS.gene023925:intron |
| GCACAGTTTCTTTGTATGAC+TGG | 0.381408 | 7.1:-25563637 | MS.gene023925:CDS |
| AGTTCTCTTGGGAGTTGATC+AGG | 0.382777 | 7.1:+25561843 | None:intergenic |
| GCAGATTTGTTCTCTGCTGC+TGG | 0.383709 | 7.1:-25559553 | MS.gene023925:CDS |
| TGTTTGATATTGAGGTCAAA+TGG | 0.384615 | 7.1:-25561611 | MS.gene023925:CDS |
| TCAATATGTGGCAGCTAGTC+AGG | 0.384647 | 7.1:-25562739 | MS.gene023925:CDS |
| GTTCTAGGTGTTTGATATTG+AGG | 0.387765 | 7.1:-25561619 | MS.gene023925:intron |
| TCACGATCAAACTCCAGTTC+TGG | 0.388817 | 7.1:+25560913 | None:intergenic |
| AATAGTGGAGTTGTATGATT+TGG | 0.395053 | 7.1:-25563681 | MS.gene023925:CDS |
| TCCTCCTGCTTAAAAGAATT+GGG | 0.402400 | 7.1:+25561276 | None:intergenic |
| GTGTAAGGGCTTGCTATGGC+TGG | 0.403702 | 7.1:-25562610 | MS.gene023925:CDS |
| CTTTGATCAAGGTGATATCT+TGG | 0.403790 | 7.1:+25562236 | None:intergenic |
| CCAACAACTACACCGGCATT+TGG | 0.404418 | 7.1:+25560868 | None:intergenic |
| AAACCATGCAAGTTACTTGA+TGG | 0.406173 | 7.1:-25558209 | MS.gene023925:CDS |
| ATTGGATGCGGACTTTCTCC+TGG | 0.414153 | 7.1:-25557405 | MS.gene023925:CDS |
| TTGGAGCAGCACCTCATTCA+AGG | 0.419480 | 7.1:-25558272 | MS.gene023925:intron |
| GGAACAAAAGATTCAGTGTA+AGG | 0.421730 | 7.1:-25562625 | MS.gene023925:CDS |
| ACGGCAAAAGCAGAATTATC+AGG | 0.425367 | 7.1:+25563236 | None:intergenic |
| GAGAATGGTCTTTCTCCTAA+AGG | 0.426532 | 7.1:-25563956 | MS.gene023925:CDS |
| TCATACTTACAATCATGGTT+TGG | 0.426869 | 7.1:+25563107 | None:intergenic |
| CAGAACTTAAACCTATTTGA+CGG | 0.431302 | 7.1:+25563150 | None:intergenic |
| ATTTAATTGAGGAAGTTTCA+TGG | 0.431801 | 7.1:-25561487 | MS.gene023925:CDS |
| GTTTGATATTGAGGTCAAAT+GGG | 0.432426 | 7.1:-25561610 | MS.gene023925:CDS |
| ATTCTTTATATGAGCTTGCT+GGG | 0.432503 | 7.1:-25558614 | MS.gene023925:CDS |
| CTATTTGTCTTGTACTCTGA+TGG | 0.437544 | 7.1:-25563848 | MS.gene023925:CDS |
| ATAGTTTGTGCTTGAGGAGA+TGG | 0.438405 | 7.1:+25560793 | None:intergenic |
| TCATGTTCCATTAGTAAGAA+AGG | 0.440610 | 7.1:-25563815 | MS.gene023925:CDS |
| ATGGTTAGATTATGGCCATC+GGG | 0.445318 | 7.1:-25561468 | MS.gene023925:CDS |
| GGAATGTACTTAGCGGTTGC+TGG | 0.457208 | 7.1:-25562714 | MS.gene023925:CDS |
| AAGGTATGGAAGTGCTCGGC+TGG | 0.458411 | 7.1:-25558017 | MS.gene023925:CDS |
| TGGTACACATCCATCACAAT+TGG | 0.459787 | 7.1:+25562179 | None:intergenic |
| GCTTCTATATAGATTGTTTG+AGG | 0.464081 | 7.1:-25558991 | MS.gene023925:intron |
| CAGGTTTGGTATCCATCTCC+AGG | 0.469553 | 7.1:-25561300 | MS.gene023925:CDS |
| ATATGAGCTTGCTGGGGAGC+TGG | 0.469642 | 7.1:-25558607 | MS.gene023925:intron |
| TTCTTGATTTGGATGATGGA+CGG | 0.470745 | 7.1:-25561577 | MS.gene023925:CDS |
| ATGGCTCATACTTACAATCA+TGG | 0.471688 | 7.1:+25563102 | None:intergenic |
| TTTGATCAAGGTGATATCTT+GGG | 0.473486 | 7.1:+25562237 | None:intergenic |
| CATGCAAGTTACTTGATGGC+TGG | 0.474892 | 7.1:-25558205 | MS.gene023925:CDS |
| CCAAATGCCGGTGTAGTTGT+TGG | 0.481965 | 7.1:-25560868 | MS.gene023925:CDS |
| TCTGTGTTATCAGCTTCAAA+TGG | 0.482953 | 7.1:-25557444 | MS.gene023925:intron |
| CTAGCTGCCACATATTGAAC+AGG | 0.483121 | 7.1:+25562744 | None:intergenic |
| CATGGTTAGATTATGGCCAT+CGG | 0.485329 | 7.1:-25561469 | MS.gene023925:CDS |
| TGGAATATATGGACATCAAA+TGG | 0.485976 | 7.1:+25562131 | None:intergenic |
| GTGAGGTTCTTACTAAGATC+TGG | 0.486056 | 7.1:-25558480 | MS.gene023925:CDS |
| TATCTACAACGCGAAAGGTA+TGG | 0.486908 | 7.1:-25558031 | MS.gene023925:CDS |
| ACTGTATTAAAGCAGAAAAG+AGG | 0.487137 | 7.1:-25563778 | MS.gene023925:CDS |
| CATTGCAGCAGGATGGCTCT+TGG | 0.492270 | 7.1:+25561875 | None:intergenic |
| AGCTTACAGCAGCACCCTGC+AGG | 0.493973 | 7.1:-25556627 | None:intergenic |
| CAACACTGACAACAACATCT+AGG | 0.496732 | 7.1:+25559602 | None:intergenic |
| TGCTTCAGCAGCTCTTGAGC+AGG | 0.504849 | 7.1:-25563732 | MS.gene023925:CDS |
| CATGTTCCATTAGTAAGAAA+GGG | 0.506521 | 7.1:-25563814 | MS.gene023925:CDS |
| CATATTTAAGAACTGAAACC+TGG | 0.510283 | 7.1:+25559677 | None:intergenic |
| TCTTGATTTGGATGATGGAC+GGG | 0.511746 | 7.1:-25561576 | MS.gene023925:CDS |
| TGCAGTATAGTTTGTGCTTG+AGG | 0.513704 | 7.1:+25560787 | None:intergenic |
| ATGCAAGTTACTTGATGGCT+GGG | 0.514082 | 7.1:-25558204 | MS.gene023925:CDS |
| CTTCACCATAAATCACTTGT+CGG | 0.514478 | 7.1:+25562937 | None:intergenic |
| CTTGCTGTTGGTACCAGAAG+AGG | 0.515409 | 7.1:-25563704 | MS.gene023925:CDS |
| TGCTTGATTTCAGAATTTCT+GGG | 0.516812 | 7.1:+25563899 | None:intergenic |
| GCCGTTGGGTGGAAGTTAAG+GGG | 0.517331 | 7.1:-25563218 | MS.gene023925:CDS |
| AAAGAATTGGGACCTGGAGA+TGG | 0.517815 | 7.1:+25561288 | None:intergenic |
| TAGAACTTTGCCTTTCATTG+AGG | 0.519459 | 7.1:-25563874 | MS.gene023925:CDS |
| ACGTAACAAGTATATAATCT+TGG | 0.521307 | 7.1:+25562159 | None:intergenic |
| GCTTGAACTAATAAGCCAAA+AGG | 0.521636 | 7.1:-25557978 | MS.gene023925:intron |
| GGAATGAATCGCATTGCAGC+AGG | 0.522804 | 7.1:+25561864 | None:intergenic |
| TGATCGTGAAGTATACCCTC+TGG | 0.523296 | 7.1:-25560899 | MS.gene023925:CDS |
| CTGGGACTTCTTCCAAATGC+CGG | 0.523872 | 7.1:-25560880 | MS.gene023925:CDS |
| CTGAATCAGCTGATGATGCT+TGG | 0.524024 | 7.1:+25558445 | None:intergenic |
| GGATAAAACAAATTTAATTG+AGG | 0.524277 | 7.1:-25561498 | MS.gene023925:CDS |
| GAGCAGGAAATTCTTGCTGT+TGG | 0.524367 | 7.1:-25563716 | MS.gene023925:CDS |
| ATGATATACGAATGAAAAGA+TGG | 0.524845 | 7.1:-25562671 | MS.gene023925:CDS |
| TTATGGCCATCGGGGTATGC+AGG | 0.525148 | 7.1:-25561459 | MS.gene023925:intron |
| TGGTACCAGAAGAGGAATAG+TGG | 0.525537 | 7.1:-25563696 | MS.gene023925:CDS |
| ACAACAACATCTAGGTACTC+TGG | 0.526157 | 7.1:+25559610 | None:intergenic |
| AGTGAGGTGCCACCCATCAA+TGG | 0.526700 | 7.1:+25563083 | None:intergenic |
| TGAGGAGATGGCTCAAAACA+TGG | 0.527943 | 7.1:+25560805 | None:intergenic |
| AAGTGATTTATGGTGAAGAC+AGG | 0.529449 | 7.1:-25562932 | MS.gene023925:CDS |
| TATTTGTCTTGTACTCTGAT+GGG | 0.530087 | 7.1:-25563847 | MS.gene023925:CDS |
| TTCACCATAAATCACTTGTC+GGG | 0.530849 | 7.1:+25562938 | None:intergenic |
| TTGTAAGTATGAGCCATTGA+TGG | 0.532619 | 7.1:-25563096 | MS.gene023925:CDS |
| TGCTTAAAAGAATTGGGACC+TGG | 0.533751 | 7.1:+25561282 | None:intergenic |
| AGCACTTTGTTCCTTGAATG+AGG | 0.535069 | 7.1:+25558261 | None:intergenic |
| TCAAAAGGACATTACCTGGC+TGG | 0.536571 | 7.1:+25561771 | None:intergenic |
| CCTGAAGAAGATGGCGCAGT+AGG | 0.537618 | 7.1:+25560761 | None:intergenic |
| AAAATTTCGGATAAGATCAC+AGG | 0.538245 | 7.1:+25559633 | None:intergenic |
| GGTCACTTGTGGCCAGTCTG+AGG | 0.543576 | 7.1:-25561519 | MS.gene023925:CDS |
| TGCTGAGCGAAAGCAAGCAT+TGG | 0.544572 | 7.1:-25558379 | MS.gene023925:CDS |
| CTGCCAGAGGGACAAAATTG+AGG | 0.545884 | 7.1:-25560477 | MS.gene023925:intron |
| CATTAACAGCAGAACCAGCC+AGG | 0.545998 | 7.1:-25561785 | MS.gene023925:intron |
| TCAAAGCTAGCAGAAGGATG+TGG | 0.546036 | 7.1:+25564004 | None:intergenic |
| GCTCTGTCAAATTTAAGGAA+TGG | 0.546133 | 7.1:-25557373 | MS.gene023925:CDS |
| TGATGGAAATGACATTCTCT+GGG | 0.549283 | 7.1:+25560840 | None:intergenic |
| AATTGAGGAAGCTTTAAGGC+TGG | 0.551432 | 7.1:-25560462 | MS.gene023925:CDS |
| TTACCACATCCGTTAGAGAA+TGG | 0.551605 | 7.1:-25563971 | MS.gene023925:CDS |
| GGAAACATTACAGAGTCGAT+TGG | 0.551947 | 7.1:-25557423 | MS.gene023925:CDS |
| TAATAAATACCTGAAGAAGA+TGG | 0.553033 | 7.1:+25560752 | None:intergenic |
| GTTTGCAAAACCAATTGTGA+TGG | 0.554033 | 7.1:-25562189 | MS.gene023925:CDS |
| CAGCCATCAAGTAACTTGCA+TGG | 0.555088 | 7.1:+25558206 | None:intergenic |
| ATAACCGTAAAGCACAGTAC+TGG | 0.555481 | 7.1:+25558750 | None:intergenic |
| TGACAGAGCACATATGAGCC+AGG | 0.558497 | 7.1:+25557387 | None:intergenic |
| TACTCTCTTGAGACGTTCTG+AGG | 0.560293 | 7.1:-25557336 | MS.gene023925:intron |
| GCACAGTACTGGCTCACAGC+AGG | 0.561193 | 7.1:+25558761 | None:intergenic |
| TGTAAGGGCTTGCTATGGCT+GGG | 0.561816 | 7.1:-25562609 | MS.gene023925:CDS |
| GCCCTGTTAGTTGCATTGCA+TGG | 0.564318 | 7.1:-25563262 | MS.gene023925:CDS |
| TATTAAAGCAGAAAAGAGGT+TGG | 0.565728 | 7.1:-25563774 | MS.gene023925:CDS |
| AGACCATTCTCTAACGGATG+TGG | 0.566563 | 7.1:+25563968 | None:intergenic |
| TGGCACCTCACTGATGCAAT+GGG | 0.567490 | 7.1:-25563072 | MS.gene023925:CDS |
| AAACTGGCCTGTTCAATATG+TGG | 0.573052 | 7.1:-25562751 | MS.gene023925:CDS |
| TTGGCTTATTAGTTCAAGCC+CGG | 0.574043 | 7.1:+25557982 | None:intergenic |
| GGTTCTTACTAAGATCTGGT+AGG | 0.574735 | 7.1:-25558476 | MS.gene023925:CDS |
| CAAATAGCAACCTCAATGAA+AGG | 0.575542 | 7.1:+25563864 | None:intergenic |
| TTCAGTGTAAGGGCTTGCTA+TGG | 0.577885 | 7.1:-25562614 | MS.gene023925:CDS |
| TTCTAAAATATTCTTAACTG+AGG | 0.578039 | 7.1:+25558231 | None:intergenic |
| GGAGAAAGACCATTCTCTAA+CGG | 0.578114 | 7.1:+25563962 | None:intergenic |
| AGAAAATAGCCTAGAAATCG+AGG | 0.584176 | 7.1:+25558411 | None:intergenic |
| ACAGTTTCTTTGTATGACTG+GGG | 0.585792 | 7.1:-25563635 | MS.gene023925:CDS |
| GTGGCACCTCACTGATGCAA+TGG | 0.589612 | 7.1:-25563073 | MS.gene023925:CDS |
| AGGAATATCTACAACGCGAA+AGG | 0.591090 | 7.1:-25558036 | MS.gene023925:CDS |
| GTTCTTACTAAGATCTGGTA+GGG | 0.594439 | 7.1:-25558475 | MS.gene023925:CDS |
| AGAGCAATGAGCTTTGATCA+AGG | 0.595485 | 7.1:+25562225 | None:intergenic |
| GGAAAATGCTGTCTTAGCAG+AGG | 0.599320 | 7.1:-25562981 | MS.gene023925:CDS |
| GATCGTGAAGTATACCCTCT+GGG | 0.601369 | 7.1:-25560898 | MS.gene023925:CDS |
| TTCTTTATATGAGCTTGCTG+GGG | 0.602363 | 7.1:-25558613 | MS.gene023925:CDS |
| ATTACAGAGTCGATTGGATG+CGG | 0.602485 | 7.1:-25557417 | MS.gene023925:CDS |
| TGTTGACATCAAGCGACACC+CGG | 0.602621 | 7.1:+25563175 | None:intergenic |
| ACAGGTAATTGCCAAACTCG+AGG | 0.602839 | 7.1:-25558786 | MS.gene023925:intron |
| ATTCACCGAATAATTTCACA+TGG | 0.607784 | 7.1:+25562111 | None:intergenic |
| CTAAGATAGTTATACCTGCA+GGG | 0.609967 | 7.1:+25556613 | None:intergenic |
| CAGTTTCTTTGTATGACTGG+GGG | 0.612432 | 7.1:-25563634 | MS.gene023925:intron |
| TCAGGACGGAATGTACTTAG+CGG | 0.621375 | 7.1:-25562721 | MS.gene023925:CDS |
| GCAGAAAAGAGGTTGGCTTG+TGG | 0.622019 | 7.1:-25563767 | MS.gene023925:CDS |
| GAATCGTCAAAGCTAGCAGA+AGG | 0.622542 | 7.1:+25563998 | None:intergenic |
| CCGTTGGGTGGAAGTTAAGG+GGG | 0.623035 | 7.1:-25563217 | MS.gene023925:CDS |
| GCCAAATGTAAACAAGAACC+AGG | 0.623286 | 7.1:-25559695 | MS.gene023925:CDS |
| GGAAACACCAACAACTACAC+CGG | 0.625624 | 7.1:+25560861 | None:intergenic |
| GAGGAGATGGCTCAAAACAT+GGG | 0.625860 | 7.1:+25560806 | None:intergenic |
| GAACAAAAGATTCAGTGTAA+GGG | 0.626088 | 7.1:-25562624 | MS.gene023925:CDS |
| TTTGATATTGAGGTCAAATG+GGG | 0.635217 | 7.1:-25561609 | MS.gene023925:CDS |
| GCGAAAGGTATGGAAGTGCT+CGG | 0.636157 | 7.1:-25558021 | MS.gene023925:CDS |
| TCCATAACCGAAAATCATGA+CGG | 0.636756 | 7.1:+25556651 | None:intergenic |
| CAGGTAATTGCCAAACTCGA+GGG | 0.637496 | 7.1:-25558785 | MS.gene023925:CDS |
| TGTAAATCAGGATTTCCTGA+AGG | 0.645303 | 7.1:+25562083 | None:intergenic |
| TGTAAGTATGAGCCATTGAT+GGG | 0.650436 | 7.1:-25563095 | MS.gene023925:CDS |
| TAATTACCTGCATACCCCGA+TGG | 0.651698 | 7.1:+25561453 | None:intergenic |
| TCCATGCAATGCAACTAACA+GGG | 0.651825 | 7.1:+25563261 | None:intergenic |
| CTGATGCAATGGGATGAACA+TGG | 0.657639 | 7.1:-25563062 | MS.gene023925:CDS |
| TGAATCGCATTGCAGCAGGA+TGG | 0.657956 | 7.1:+25561868 | None:intergenic |
| ATATAGACTTTATGCTATCG+AGG | 0.659598 | 7.1:-25563039 | MS.gene023925:CDS |
| TATGTGGCAGCTAGTCAGGA+CGG | 0.664154 | 7.1:-25562735 | MS.gene023925:CDS |
| AGTCTTTGGAGATGTTACCC+AGG | 0.680429 | 7.1:-25562646 | MS.gene023925:CDS |
| TGGTTAGATTATGGCCATCG+GGG | 0.695776 | 7.1:-25561467 | MS.gene023925:CDS |
| TTCATCCCATTGCATCAGTG+AGG | 0.699050 | 7.1:+25563067 | None:intergenic |
| CATTTGGAAGAAGTCCCAGA+GGG | 0.711027 | 7.1:+25560884 | None:intergenic |
| AAGTATGAGCCATTGATGGG+TGG | 0.726456 | 7.1:-25563092 | MS.gene023925:CDS |
| GCATTTGGAAGAAGTCCCAG+AGG | 0.750913 | 7.1:+25560883 | None:intergenic |
| GTATATAGCAAGCTGCAGTG+CGG | 0.764014 | 7.1:+25558946 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 25556628 | 25567928 | 25556628 | ID=MS.gene023925 |
| chr7.1 | mRNA | 25556628 | 25567928 | 25556628 | ID=MS.gene023925.t1;Parent=MS.gene023925 |
| chr7.1 | exon | 25567926 | 25567928 | 25567926 | ID=MS.gene023925.t1.exon1;Parent=MS.gene023925.t1 |
| chr7.1 | CDS | 25567926 | 25567928 | 25567926 | ID=cds.MS.gene023925.t1;Parent=MS.gene023925.t1 |
| chr7.1 | exon | 25563635 | 25564050 | 25563635 | ID=MS.gene023925.t1.exon2;Parent=MS.gene023925.t1 |
| chr7.1 | CDS | 25563635 | 25564050 | 25563635 | ID=cds.MS.gene023925.t1;Parent=MS.gene023925.t1 |
| chr7.1 | exon | 25562872 | 25563304 | 25562872 | ID=MS.gene023925.t1.exon3;Parent=MS.gene023925.t1 |
| chr7.1 | CDS | 25562872 | 25563304 | 25562872 | ID=cds.MS.gene023925.t1;Parent=MS.gene023925.t1 |
| chr7.1 | exon | 25562567 | 25562790 | 25562567 | ID=MS.gene023925.t1.exon4;Parent=MS.gene023925.t1 |
| chr7.1 | CDS | 25562567 | 25562790 | 25562567 | ID=cds.MS.gene023925.t1;Parent=MS.gene023925.t1 |
| chr7.1 | exon | 25562082 | 25562277 | 25562082 | ID=MS.gene023925.t1.exon5;Parent=MS.gene023925.t1 |
| chr7.1 | CDS | 25562082 | 25562277 | 25562082 | ID=cds.MS.gene023925.t1;Parent=MS.gene023925.t1 |
| chr7.1 | exon | 25561786 | 25561931 | 25561786 | ID=MS.gene023925.t1.exon6;Parent=MS.gene023925.t1 |
| chr7.1 | CDS | 25561786 | 25561931 | 25561786 | ID=cds.MS.gene023925.t1;Parent=MS.gene023925.t1 |
| chr7.1 | exon | 25561460 | 25561634 | 25561460 | ID=MS.gene023925.t1.exon7;Parent=MS.gene023925.t1 |
| chr7.1 | CDS | 25561460 | 25561634 | 25561460 | ID=cds.MS.gene023925.t1;Parent=MS.gene023925.t1 |
| chr7.1 | exon | 25561266 | 25561319 | 25561266 | ID=MS.gene023925.t1.exon8;Parent=MS.gene023925.t1 |
| chr7.1 | CDS | 25561266 | 25561319 | 25561266 | ID=cds.MS.gene023925.t1;Parent=MS.gene023925.t1 |
| chr7.1 | exon | 25560762 | 25560941 | 25560762 | ID=MS.gene023925.t1.exon9;Parent=MS.gene023925.t1 |
| chr7.1 | CDS | 25560762 | 25560941 | 25560762 | ID=cds.MS.gene023925.t1;Parent=MS.gene023925.t1 |
| chr7.1 | exon | 25560380 | 25560492 | 25560380 | ID=MS.gene023925.t1.exon10;Parent=MS.gene023925.t1 |
| chr7.1 | CDS | 25560380 | 25560492 | 25560380 | ID=cds.MS.gene023925.t1;Parent=MS.gene023925.t1 |
| chr7.1 | exon | 25559541 | 25559717 | 25559541 | ID=MS.gene023925.t1.exon11;Parent=MS.gene023925.t1 |
| chr7.1 | CDS | 25559541 | 25559717 | 25559541 | ID=cds.MS.gene023925.t1;Parent=MS.gene023925.t1 |
| chr7.1 | exon | 25558944 | 25559001 | 25558944 | ID=MS.gene023925.t1.exon12;Parent=MS.gene023925.t1 |
| chr7.1 | CDS | 25558944 | 25559001 | 25558944 | ID=cds.MS.gene023925.t1;Parent=MS.gene023925.t1 |
| chr7.1 | exon | 25558745 | 25558804 | 25558745 | ID=MS.gene023925.t1.exon13;Parent=MS.gene023925.t1 |
| chr7.1 | CDS | 25558745 | 25558804 | 25558745 | ID=cds.MS.gene023925.t1;Parent=MS.gene023925.t1 |
| chr7.1 | exon | 25558608 | 25558649 | 25558608 | ID=MS.gene023925.t1.exon14;Parent=MS.gene023925.t1 |
| chr7.1 | CDS | 25558608 | 25558649 | 25558608 | ID=cds.MS.gene023925.t1;Parent=MS.gene023925.t1 |
| chr7.1 | exon | 25558372 | 25558502 | 25558372 | ID=MS.gene023925.t1.exon15;Parent=MS.gene023925.t1 |
| chr7.1 | CDS | 25558372 | 25558502 | 25558372 | ID=cds.MS.gene023925.t1;Parent=MS.gene023925.t1 |
| chr7.1 | exon | 25558150 | 25558285 | 25558150 | ID=MS.gene023925.t1.exon16;Parent=MS.gene023925.t1 |
| chr7.1 | CDS | 25558150 | 25558285 | 25558150 | ID=cds.MS.gene023925.t1;Parent=MS.gene023925.t1 |
| chr7.1 | exon | 25557979 | 25558056 | 25557979 | ID=MS.gene023925.t1.exon17;Parent=MS.gene023925.t1 |
| chr7.1 | CDS | 25557979 | 25558056 | 25557979 | ID=cds.MS.gene023925.t1;Parent=MS.gene023925.t1 |
| chr7.1 | exon | 25557337 | 25557453 | 25557337 | ID=MS.gene023925.t1.exon18;Parent=MS.gene023925.t1 |
| chr7.1 | CDS | 25557337 | 25557453 | 25557337 | ID=cds.MS.gene023925.t1;Parent=MS.gene023925.t1 |
| chr7.1 | exon | 25556628 | 25556690 | 25556628 | ID=MS.gene023925.t1.exon19;Parent=MS.gene023925.t1 |
| chr7.1 | CDS | 25556628 | 25556690 | 25556628 | ID=cds.MS.gene023925.t1;Parent=MS.gene023925.t1 |
| Gene Sequence |
| Protein sequence |
