Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024387.t1 | XP_003626611.1 | 97.3 | 186 | 5 | 0 | 39 | 224 | 44 | 229 | 5.00E-97 | 364 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024387.t1 | Q9SJ54 | 32.1 | 156 | 106 | 0 | 55 | 210 | 35 | 190 | 7.7e-22 | 105.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024387.t1 | Q2HTB8 | 97.3 | 186 | 5 | 0 | 39 | 224 | 44 | 229 | 3.6e-97 | 364.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene024387 | MS.gene025640 | PPI |
MS.gene007146 | MS.gene024387 | PPI |
MS.gene050363 | MS.gene024387 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024387.t1 | MTR_7g118270 | 94.323 | 229 | 8 | 1 | 1 | 224 | 1 | 229 | 1.78e-157 | 435 |
MS.gene024387.t1 | MTR_8g024250 | 60.847 | 189 | 74 | 0 | 35 | 223 | 92 | 280 | 7.28e-74 | 225 |
MS.gene024387.t1 | MTR_7g106050 | 37.888 | 161 | 98 | 2 | 45 | 204 | 24 | 183 | 5.43e-35 | 124 |
MS.gene024387.t1 | MTR_3g092790 | 36.538 | 156 | 93 | 2 | 64 | 219 | 49 | 198 | 6.98e-29 | 108 |
MS.gene024387.t1 | MTR_2g086790 | 32.584 | 178 | 106 | 4 | 39 | 204 | 18 | 193 | 1.46e-24 | 97.1 |
MS.gene024387.t1 | MTR_1g057420 | 33.103 | 145 | 97 | 0 | 60 | 204 | 39 | 183 | 1.52e-24 | 96.7 |
MS.gene024387.t1 | MTR_2g011350 | 29.570 | 186 | 127 | 3 | 24 | 207 | 7 | 190 | 6.01e-22 | 89.7 |
MS.gene024387.t1 | MTR_4g051880 | 33.566 | 143 | 87 | 1 | 64 | 198 | 44 | 186 | 6.16e-20 | 84.7 |
MS.gene024387.t1 | MTR_2g087080 | 30.814 | 172 | 111 | 5 | 20 | 185 | 5 | 174 | 2.71e-16 | 75.1 |
MS.gene024387.t1 | MTR_4g119428 | 30.573 | 157 | 105 | 3 | 51 | 205 | 65 | 219 | 1.79e-15 | 73.2 |
MS.gene024387.t1 | MTR_1g057270 | 30.464 | 151 | 101 | 3 | 57 | 205 | 73 | 221 | 3.33e-15 | 72.8 |
MS.gene024387.t1 | MTR_2g100060 | 27.108 | 166 | 112 | 3 | 53 | 217 | 77 | 234 | 3.69e-12 | 64.3 |
MS.gene024387.t1 | MTR_2g087000 | 25.641 | 156 | 114 | 2 | 33 | 188 | 42 | 195 | 9.26e-12 | 62.8 |
MS.gene024387.t1 | MTR_5g087760 | 23.353 | 167 | 123 | 4 | 41 | 203 | 70 | 235 | 1.28e-11 | 62.8 |
MS.gene024387.t1 | MTR_1g105570 | 23.958 | 192 | 136 | 3 | 12 | 200 | 25 | 209 | 9.08e-11 | 60.1 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene024387.t1 | AT4G01410 | 53.226 | 186 | 87 | 0 | 39 | 224 | 42 | 227 | 2.19e-66 | 204 |
MS.gene024387.t1 | AT3G52470 | 32.370 | 173 | 115 | 2 | 39 | 210 | 17 | 188 | 1.96e-32 | 117 |
MS.gene024387.t1 | AT2G35960 | 32.051 | 156 | 106 | 0 | 55 | 210 | 35 | 190 | 1.54e-29 | 109 |
MS.gene024387.t1 | AT3G44220 | 33.149 | 181 | 116 | 3 | 48 | 224 | 27 | 206 | 1.47e-28 | 107 |
MS.gene024387.t1 | AT4G09590 | 30.488 | 164 | 112 | 2 | 48 | 210 | 29 | 191 | 3.69e-28 | 106 |
MS.gene024387.t1 | AT3G11660 | 34.132 | 167 | 106 | 3 | 49 | 212 | 26 | 191 | 4.35e-28 | 105 |
MS.gene024387.t1 | AT2G35970 | 31.098 | 164 | 111 | 2 | 48 | 210 | 29 | 191 | 1.78e-27 | 104 |
MS.gene024387.t1 | AT5G53730 | 33.962 | 159 | 98 | 4 | 49 | 204 | 38 | 192 | 6.12e-27 | 103 |
MS.gene024387.t1 | AT5G22200 | 33.136 | 169 | 108 | 3 | 60 | 224 | 43 | 210 | 1.97e-26 | 101 |
MS.gene024387.t1 | AT5G06330 | 34.395 | 157 | 97 | 4 | 60 | 212 | 39 | 193 | 6.50e-26 | 100 |
MS.gene024387.t1 | AT5G22870 | 30.120 | 166 | 112 | 3 | 44 | 206 | 30 | 194 | 3.68e-19 | 82.4 |
MS.gene024387.t1 | AT4G05220 | 26.786 | 168 | 120 | 3 | 42 | 209 | 48 | 212 | 1.17e-18 | 81.6 |
MS.gene024387.t1 | AT2G35980 | 28.834 | 163 | 113 | 3 | 41 | 201 | 41 | 202 | 3.83e-16 | 74.7 |
MS.gene024387.t1 | AT1G61760 | 23.232 | 198 | 148 | 3 | 5 | 202 | 11 | 204 | 4.62e-14 | 68.9 |
MS.gene024387.t1 | AT2G27080 | 22.111 | 199 | 149 | 3 | 11 | 203 | 42 | 240 | 1.36e-13 | 68.6 |
MS.gene024387.t1 | AT2G27080 | 22.111 | 199 | 149 | 3 | 11 | 203 | 42 | 240 | 1.36e-13 | 68.6 |
MS.gene024387.t1 | AT3G11650 | 30.263 | 152 | 106 | 0 | 50 | 201 | 64 | 215 | 2.70e-13 | 67.4 |
MS.gene024387.t1 | AT5G06320 | 26.667 | 165 | 119 | 2 | 41 | 204 | 49 | 212 | 6.38e-12 | 63.2 |
MS.gene024387.t1 | AT3G52460 | 30.159 | 126 | 87 | 1 | 24 | 149 | 92 | 216 | 4.73e-11 | 61.6 |
Find 75 sgRNAs with CRISPR-Local
Find 83 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGGAGATGGTGTTGTTGGTT+TGG | 0.257389 | 7.2:+367972 | None:intergenic |
ACAATAAGAAGTGCACATTA+TGG | 0.331744 | 7.2:-367450 | MS.gene024387:CDS |
GGTTTGAAACTTGTGTTTCT+TGG | 0.338420 | 7.2:-367495 | MS.gene024387:CDS |
TTGTTCATTTGTAGTTTGTC+AGG | 0.341103 | 7.2:+367948 | None:intergenic |
AGATGGTGTTGTTGGTTTGG+AGG | 0.350365 | 7.2:+367975 | None:intergenic |
AGTGCACATTATGGGTTCTA+TGG | 0.355998 | 7.2:-367441 | MS.gene024387:CDS |
GTTGTCGGTGCTGCCATCTA+TGG | 0.361215 | 7.2:-367792 | MS.gene024387:CDS |
TAAACAGAGACACGCTTGTT+TGG | 0.364464 | 7.2:+367705 | None:intergenic |
CAACATAACCTGCGGTGTTA+TGG | 0.381942 | 7.2:+367641 | None:intergenic |
AAACAGAGACACGCTTGTTT+GGG | 0.403133 | 7.2:+367706 | None:intergenic |
GAGGTTGAGACTGAGAGCTT+TGG | 0.412653 | 7.2:+367994 | None:intergenic |
GAAGAAAGGTGTTGTTGGAC+AGG | 0.422913 | 7.2:-367394 | MS.gene024387:CDS |
GTTGGACAGGTTCCTCTGCT+TGG | 0.423856 | 7.2:-367381 | MS.gene024387:CDS |
GTGTCACTCTACTTGTTCTC+TGG | 0.424057 | 7.2:-367848 | MS.gene024387:CDS |
TTGATGCTGGATGAGGCTTA+TGG | 0.430904 | 7.2:-367525 | MS.gene024387:CDS |
GAAGAAGAAGGTGGAGCAGC+AGG | 0.436261 | 7.2:+367924 | None:intergenic |
GTTTCGTTGTCACCCGTGAT+AGG | 0.438013 | 7.2:-367588 | MS.gene024387:CDS |
CACCGCCGTGCCTCCTATCA+CGG | 0.449253 | 7.2:+367575 | None:intergenic |
TGTTCATTTGTAGTTTGTCA+GGG | 0.450921 | 7.2:+367949 | None:intergenic |
AGTTTGAAGAAAGGTGTTGT+TGG | 0.459945 | 7.2:-367399 | MS.gene024387:CDS |
CAATAAGAAGTGCACATTAT+GGG | 0.461680 | 7.2:-367449 | MS.gene024387:CDS |
GATAGGAGGCACGGCGGTGC+CGG | 0.463367 | 7.2:-367571 | MS.gene024387:CDS |
ACCATCTTTCTCCTACTAAT+CGG | 0.470963 | 7.2:-367870 | MS.gene024387:CDS |
TGTTATGGCTTGGTTCCTAT+AGG | 0.472587 | 7.2:+367656 | None:intergenic |
TCCACACAAACCCCACTTCA+CGG | 0.478409 | 7.2:-367814 | MS.gene024387:CDS |
GGAAGGTTGAGGTGGAAAGC+AGG | 0.479345 | 7.2:-367474 | MS.gene024387:CDS |
GTAGAGTGACACCGATTAGT+AGG | 0.480110 | 7.2:+367859 | None:intergenic |
GCTTGTTTGGGTTCTTAATG+AGG | 0.483668 | 7.2:+367718 | None:intergenic |
TGAAACTTGTGTTTCTTGGA+AGG | 0.491598 | 7.2:-367491 | MS.gene024387:CDS |
GATGAGGCTTATGGAGTGGT+GGG | 0.497395 | 7.2:-367516 | MS.gene024387:CDS |
GAATGTGGCAAAAGCACGTC+CGG | 0.497511 | 7.2:+367896 | None:intergenic |
GTGTCTCTGTTTACTATGAC+AGG | 0.497541 | 7.2:-367695 | MS.gene024387:CDS |
CACGGCGGTGCCGGTGTCAG+TGG | 0.506185 | 7.2:-367562 | MS.gene024387:CDS |
GGATGAGGCTTATGGAGTGG+TGG | 0.506636 | 7.2:-367517 | MS.gene024387:CDS |
TAACCTGCGGTGTTATGGCT+TGG | 0.514717 | 7.2:+367646 | None:intergenic |
AAACCCCACTTCACGGTTGT+CGG | 0.517422 | 7.2:-367807 | MS.gene024387:CDS |
TTCATTTGTAGTTTGTCAGG+GGG | 0.517944 | 7.2:+367951 | None:intergenic |
TTGTGTTTCTTGGAAGGTTG+AGG | 0.518679 | 7.2:-367485 | MS.gene024387:CDS |
GGCGGAAAGGAGAGGTGGTG+AGG | 0.529043 | 7.2:+367758 | None:intergenic |
GACGTTGAACTGCAAGGTGG+CGG | 0.539926 | 7.2:+367740 | None:intergenic |
ACCGCCGTGCCTCCTATCAC+GGG | 0.546771 | 7.2:+367576 | None:intergenic |
AGCACCGACAACCGTGAAGT+GGG | 0.547830 | 7.2:+367803 | None:intergenic |
AGTATCGAATGGGTTGATGC+TGG | 0.561668 | 7.2:-367538 | MS.gene024387:CDS |
GGTTGTGTTGAAGCCATAGA+TGG | 0.563401 | 7.2:+367779 | None:intergenic |
GAGAAAGATGGTGAGGAATG+TGG | 0.564646 | 7.2:+367881 | None:intergenic |
TTTCATATGTCTATGTAGCA+AGG | 0.568280 | 7.2:+367351 | None:intergenic |
CAGCACCGACAACCGTGAAG+TGG | 0.571917 | 7.2:+367802 | None:intergenic |
GTGTCAGTGGAAGTATCGAA+TGG | 0.575731 | 7.2:-367549 | MS.gene024387:CDS |
GAAGGTTGAGGTGGAAAGCA+GGG | 0.580693 | 7.2:-367473 | MS.gene024387:CDS |
GTTCATTTGTAGTTTGTCAG+GGG | 0.581299 | 7.2:+367950 | None:intergenic |
ACCGATTAGTAGGAGAAAGA+TGG | 0.581384 | 7.2:+367869 | None:intergenic |
GAATGGGTTGATGCTGGATG+AGG | 0.584550 | 7.2:-367532 | MS.gene024387:CDS |
GTATTGATCAGTTTGAAGAA+AGG | 0.586844 | 7.2:-367408 | MS.gene024387:CDS |
TGAAGTGGGGTTTGTGTGGA+CGG | 0.587867 | 7.2:+367817 | None:intergenic |
TTCGATACTTCCACTGACAC+CGG | 0.587929 | 7.2:+367552 | None:intergenic |
TCGTTGTCACCCGTGATAGG+AGG | 0.593989 | 7.2:-367585 | MS.gene024387:CDS |
TGTCAGTGGAAGTATCGAAT+GGG | 0.594065 | 7.2:-367548 | MS.gene024387:CDS |
ACCGTGAAGTGGGGTTTGTG+TGG | 0.595899 | 7.2:+367813 | None:intergenic |
CGTCCGGAAGAAGAAGAAGA+AGG | 0.596935 | 7.2:+367912 | None:intergenic |
TGAACTGCAAGGTGGCGGAA+AGG | 0.610601 | 7.2:+367745 | None:intergenic |
TGTTTCTTGGAAGGTTGAGG+TGG | 0.612129 | 7.2:-367482 | MS.gene024387:CDS |
TGCAAGGTGGCGGAAAGGAG+AGG | 0.612911 | 7.2:+367750 | None:intergenic |
AATGAGGACGTTGAACTGCA+AGG | 0.627017 | 7.2:+367734 | None:intergenic |
TCATTTGTAGTTTGTCAGGG+GGG | 0.633124 | 7.2:+367952 | None:intergenic |
GTCACCCGTGATAGGAGGCA+CGG | 0.633334 | 7.2:-367580 | MS.gene024387:CDS |
GAACCAAGCCATAACACCGC+AGG | 0.637199 | 7.2:-367649 | MS.gene024387:CDS |
CAAGGTGGAGTACCAAGCAG+AGG | 0.643384 | 7.2:+367369 | None:intergenic |
GCACCGACAACCGTGAAGTG+GGG | 0.662185 | 7.2:+367804 | None:intergenic |
TTAGTAGGAGAAAGATGGTG+AGG | 0.663920 | 7.2:+367874 | None:intergenic |
AAGGTGGCGGAAAGGAGAGG+TGG | 0.684020 | 7.2:+367753 | None:intergenic |
AGCGGTGGCAACATAACCTG+CGG | 0.687182 | 7.2:+367633 | None:intergenic |
GCTGGATGAGGCTTATGGAG+TGG | 0.698271 | 7.2:-367520 | MS.gene024387:CDS |
CATATGTCTATGTAGCAAGG+TGG | 0.704549 | 7.2:+367354 | None:intergenic |
ACCCGTGATAGGAGGCACGG+CGG | 0.754758 | 7.2:-367577 | MS.gene024387:CDS |
GAGGACGTTGAACTGCAAGG+TGG | 0.772968 | 7.2:+367737 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
! | ACAATAAGAAGTGCACATTA+TGG | - | chr7.2:367908-367927 | MS.gene024387:CDS | 30.0% |
! | CAATAAGAAGTGCACATTAT+GGG | - | chr7.2:367909-367928 | MS.gene024387:CDS | 30.0% |
! | GTATTGATCAGTTTGAAGAA+AGG | - | chr7.2:367950-367969 | MS.gene024387:CDS | 30.0% |
! | TGTTCATTTGTAGTTTGTCA+GGG | + | chr7.2:367412-367431 | None:intergenic | 30.0% |
! | TTGTTCATTTGTAGTTTGTC+AGG | + | chr7.2:367413-367432 | None:intergenic | 30.0% |
ACCATCTTTCTCCTACTAAT+CGG | - | chr7.2:367488-367507 | MS.gene024387:CDS | 35.0% | |
TGAAACTTGTGTTTCTTGGA+AGG | - | chr7.2:367867-367886 | MS.gene024387:CDS | 35.0% | |
! | GGTTTGAAACTTGTGTTTCT+TGG | - | chr7.2:367863-367882 | MS.gene024387:CDS | 35.0% |
! | GTTCATTTGTAGTTTGTCAG+GGG | + | chr7.2:367411-367430 | None:intergenic | 35.0% |
! | TTCATTTGTAGTTTGTCAGG+GGG | + | chr7.2:367410-367429 | None:intergenic | 35.0% |
!! | AGTTTGAAGAAAGGTGTTGT+TGG | - | chr7.2:367959-367978 | MS.gene024387:CDS | 35.0% |
AAACAGAGACACGCTTGTTT+GGG | + | chr7.2:367655-367674 | None:intergenic | 40.0% | |
ACCGATTAGTAGGAGAAAGA+TGG | + | chr7.2:367492-367511 | None:intergenic | 40.0% | |
AGTGCACATTATGGGTTCTA+TGG | - | chr7.2:367917-367936 | MS.gene024387:CDS | 40.0% | |
CATATGTCTATGTAGCAAGG+TGG | + | chr7.2:368007-368026 | None:intergenic | 40.0% | |
CTATGCTTCTCCAGAAAAAG+CGG | + | chr7.2:367746-367765 | None:intergenic | 40.0% | |
GTGTCTCTGTTTACTATGAC+AGG | - | chr7.2:367663-367682 | MS.gene024387:CDS | 40.0% | |
TAAACAGAGACACGCTTGTT+TGG | + | chr7.2:367656-367675 | None:intergenic | 40.0% | |
TTAGTAGGAGAAAGATGGTG+AGG | + | chr7.2:367487-367506 | None:intergenic | 40.0% | |
TTGTGTTTCTTGGAAGGTTG+AGG | - | chr7.2:367873-367892 | MS.gene024387:CDS | 40.0% | |
! | GCTTGTTTGGGTTCTTAATG+AGG | + | chr7.2:367643-367662 | None:intergenic | 40.0% |
! | TCATTTGTAGTTTGTCAGGG+GGG | + | chr7.2:367409-367428 | None:intergenic | 40.0% |
!! | TCTCTGCTTTTGTGTCCTAT+AGG | - | chr7.2:367687-367706 | MS.gene024387:CDS | 40.0% |
!! | TGTCAGTGGAAGTATCGAAT+GGG | - | chr7.2:367810-367829 | MS.gene024387:CDS | 40.0% |
!! | TGTTATGGCTTGGTTCCTAT+AGG | + | chr7.2:367705-367724 | None:intergenic | 40.0% |
!! | TTTTCTGGAGAAGCATAGTC+AGG | - | chr7.2:367748-367767 | MS.gene024387:CDS | 40.0% |
AATGAGGACGTTGAACTGCA+AGG | + | chr7.2:367627-367646 | None:intergenic | 45.0% | |
CCACCTTCTTCTTCTTCTTC+CGG | - | chr7.2:367443-367462 | MS.gene024387:CDS | 45.0% | |
GAGAAAGATGGTGAGGAATG+TGG | + | chr7.2:367480-367499 | None:intergenic | 45.0% | |
GGTTGTGTTGAAGCCATAGA+TGG | + | chr7.2:367582-367601 | None:intergenic | 45.0% | |
TGTTTCTTGGAAGGTTGAGG+TGG | - | chr7.2:367876-367895 | MS.gene024387:CDS | 45.0% | |
TTCGATACTTCCACTGACAC+CGG | + | chr7.2:367809-367828 | None:intergenic | 45.0% | |
TTGATGCTGGATGAGGCTTA+TGG | - | chr7.2:367833-367852 | MS.gene024387:CDS | 45.0% | |
! | CAACATAACCTGCGGTGTTA+TGG | + | chr7.2:367720-367739 | None:intergenic | 45.0% |
! | GTAGAGTGACACCGATTAGT+AGG | + | chr7.2:367502-367521 | None:intergenic | 45.0% |
! | GTGTCACTCTACTTGTTCTC+TGG | - | chr7.2:367510-367529 | MS.gene024387:CDS | 45.0% |
!! | AGATGGTGTTGTTGGTTTGG+AGG | + | chr7.2:367386-367405 | None:intergenic | 45.0% |
!! | AGTATCGAATGGGTTGATGC+TGG | - | chr7.2:367820-367839 | MS.gene024387:CDS | 45.0% |
!! | GAAGAAAGGTGTTGTTGGAC+AGG | - | chr7.2:367964-367983 | MS.gene024387:CDS | 45.0% |
!! | GTGTCAGTGGAAGTATCGAA+TGG | - | chr7.2:367809-367828 | MS.gene024387:CDS | 45.0% |
!!! | TATGTTGCCACCGCTTTTTC+TGG | - | chr7.2:367733-367752 | MS.gene024387:CDS | 45.0% |
AAACCCCACTTCACGGTTGT+CGG | - | chr7.2:367551-367570 | MS.gene024387:CDS | 50.0% | |
CCGGAAGAAGAAGAAGAAGG+TGG | + | chr7.2:367446-367465 | None:intergenic | 50.0% | |
CGTCCGGAAGAAGAAGAAGA+AGG | + | chr7.2:367449-367468 | None:intergenic | 50.0% | |
GAAGGTTGAGGTGGAAAGCA+GGG | - | chr7.2:367885-367904 | MS.gene024387:CDS | 50.0% | |
GAGGTTGAGACTGAGAGCTT+TGG | + | chr7.2:367367-367386 | None:intergenic | 50.0% | |
GATGAGGCTTATGGAGTGGT+GGG | - | chr7.2:367842-367861 | MS.gene024387:CDS | 50.0% | |
GTTTCGTTGTCACCCGTGAT+AGG | - | chr7.2:367770-367789 | MS.gene024387:CDS | 50.0% | |
TCCACACAAACCCCACTTCA+CGG | - | chr7.2:367544-367563 | MS.gene024387:CDS | 50.0% | |
TGAAGTGGGGTTTGTGTGGA+CGG | + | chr7.2:367544-367563 | None:intergenic | 50.0% | |
TGCTTCTCCAGAAAAAGCGG+TGG | + | chr7.2:367743-367762 | None:intergenic | 50.0% | |
! | GAATGTGGCAAAAGCACGTC+CGG | + | chr7.2:367465-367484 | None:intergenic | 50.0% |
!! | GAATGGGTTGATGCTGGATG+AGG | - | chr7.2:367826-367845 | MS.gene024387:CDS | 50.0% |
!! | GGGAGATGGTGTTGTTGGTT+TGG | + | chr7.2:367389-367408 | None:intergenic | 50.0% |
!! | TAACCTGCGGTGTTATGGCT+TGG | + | chr7.2:367715-367734 | None:intergenic | 50.0% |
ACCGTGAAGTGGGGTTTGTG+TGG | + | chr7.2:367548-367567 | None:intergenic | 55.0% | |
AGCGGTGGCAACATAACCTG+CGG | + | chr7.2:367728-367747 | None:intergenic | 55.0% | |
GAACCAAGCCATAACACCGC+AGG | - | chr7.2:367709-367728 | MS.gene024387:CDS | 55.0% | |
GAAGAAGAAGGTGGAGCAGC+AGG | + | chr7.2:367437-367456 | None:intergenic | 55.0% | |
GACGTTGAACTGCAAGGTGG+CGG | + | chr7.2:367621-367640 | None:intergenic | 55.0% | |
GAGGACGTTGAACTGCAAGG+TGG | + | chr7.2:367624-367643 | None:intergenic | 55.0% | |
GCTGGATGAGGCTTATGGAG+TGG | - | chr7.2:367838-367857 | MS.gene024387:CDS | 55.0% | |
GGAAGGTTGAGGTGGAAAGC+AGG | - | chr7.2:367884-367903 | MS.gene024387:CDS | 55.0% | |
GGATGAGGCTTATGGAGTGG+TGG | - | chr7.2:367841-367860 | MS.gene024387:CDS | 55.0% | |
GTTGGACAGGTTCCTCTGCT+TGG | - | chr7.2:367977-367996 | MS.gene024387:CDS | 55.0% | |
TCGTTGTCACCCGTGATAGG+AGG | - | chr7.2:367773-367792 | MS.gene024387:CDS | 55.0% | |
! | CAAGGTGGAGTACCAAGCAG+AGG | + | chr7.2:367992-368011 | None:intergenic | 55.0% |
! | GTAGTTTGTCAGGGGGGAGA+TGG | + | chr7.2:367403-367422 | None:intergenic | 55.0% |
!! | AGCACCGACAACCGTGAAGT+GGG | + | chr7.2:367558-367577 | None:intergenic | 55.0% |
!! | GTTGTCGGTGCTGCCATCTA+TGG | - | chr7.2:367566-367585 | MS.gene024387:CDS | 55.0% |
!! | TGAACTGCAAGGTGGCGGAA+AGG | + | chr7.2:367616-367635 | None:intergenic | 55.0% |
GTCACCCGTGATAGGAGGCA+CGG | - | chr7.2:367778-367797 | MS.gene024387:CDS | 60.0% | |
! | GCACCGACAACCGTGAAGTG+GGG | + | chr7.2:367557-367576 | None:intergenic | 60.0% |
!! | AAGGTGGCGGAAAGGAGAGG+TGG | + | chr7.2:367608-367627 | None:intergenic | 60.0% |
!! | CAGCACCGACAACCGTGAAG+TGG | + | chr7.2:367559-367578 | None:intergenic | 60.0% |
!! | CAGGGGGGAGATGGTGTTGT+TGG | + | chr7.2:367394-367413 | None:intergenic | 60.0% |
!! | TGCAAGGTGGCGGAAAGGAG+AGG | + | chr7.2:367611-367630 | None:intergenic | 60.0% |
ACCGCCGTGCCTCCTATCAC+GGG | + | chr7.2:367785-367804 | None:intergenic | 65.0% | |
CACCGCCGTGCCTCCTATCA+CGG | + | chr7.2:367786-367805 | None:intergenic | 65.0% | |
GGCGGAAAGGAGAGGTGGTG+AGG | + | chr7.2:367603-367622 | None:intergenic | 65.0% | |
! | ACCCGTGATAGGAGGCACGG+CGG | - | chr7.2:367781-367800 | MS.gene024387:CDS | 65.0% |
! | GATAGGAGGCACGGCGGTGC+CGG | - | chr7.2:367787-367806 | MS.gene024387:CDS | 70.0% |
!! | CACGGCGGTGCCGGTGTCAG+TGG | - | chr7.2:367796-367815 | MS.gene024387:CDS | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr7.2 | gene | 367353 | 368027 | 367353 | ID=MS.gene024387 |
chr7.2 | mRNA | 367353 | 368027 | 367353 | ID=MS.gene024387.t1;Parent=MS.gene024387 |
chr7.2 | exon | 367353 | 368027 | 367353 | ID=MS.gene024387.t1.exon1;Parent=MS.gene024387.t1 |
chr7.2 | CDS | 367353 | 368027 | 367353 | ID=cds.MS.gene024387.t1;Parent=MS.gene024387.t1 |
Gene Sequence |
Protein sequence |