Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024853.t1 | XP_013453326.1 | 90.4 | 1662 | 155 | 2 | 1 | 1658 | 1 | 1662 | 0.00E+00 | 2136.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024853.t1 | Q9LUI2 | 38.3 | 1757 | 956 | 22 | 1 | 1658 | 1 | 1728 | 2.6e-183 | 644.8 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024853.t1 | A0A072UNF2 | 90.4 | 1662 | 155 | 2 | 1 | 1658 | 1 | 1662 | 0.0e+00 | 2136.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene43396 | MS.gene024853 | PPI |
| MS.gene024853 | MS.gene50543 | PPI |
| MS.gene024853 | MS.gene020272 | PPI |
| MS.gene39950 | MS.gene024853 | PPI |
| MS.gene024853 | MS.gene054880 | PPI |
| MS.gene018133 | MS.gene024853 | PPI |
| MS.gene036195 | MS.gene024853 | PPI |
| MS.gene024853 | MS.gene49383 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024853.t1 | MTR_5g006520 | 95.548 | 1662 | 70 | 2 | 1 | 1658 | 1 | 1662 | 0.0 | 3105 |
| MS.gene024853.t1 | MTR_5g006520 | 95.531 | 1656 | 70 | 2 | 1 | 1652 | 1 | 1656 | 0.0 | 3079 |
| MS.gene024853.t1 | MTR_1g103160 | 57.278 | 1793 | 617 | 18 | 1 | 1658 | 1 | 1779 | 0.0 | 1817 |
| MS.gene024853.t1 | MTR_1g103160 | 57.303 | 1787 | 614 | 18 | 7 | 1658 | 4 | 1776 | 0.0 | 1811 |
| MS.gene024853.t1 | MTR_1g103160 | 56.769 | 1758 | 611 | 18 | 36 | 1658 | 1 | 1744 | 0.0 | 1750 |
| MS.gene024853.t1 | MTR_1g071540 | 36.079 | 1821 | 972 | 22 | 2 | 1658 | 4 | 1796 | 0.0 | 944 |
| MS.gene024853.t1 | MTR_7g095410 | 33.513 | 1859 | 950 | 38 | 1 | 1658 | 1 | 1774 | 0.0 | 758 |
| MS.gene024853.t1 | MTR_7g095410 | 33.279 | 1830 | 975 | 37 | 1 | 1658 | 1 | 1756 | 0.0 | 741 |
| MS.gene024853.t1 | MTR_7g095410 | 32.887 | 1791 | 964 | 36 | 36 | 1658 | 1 | 1721 | 0.0 | 694 |
| MS.gene024853.t1 | MTR_5g075490 | 75.862 | 87 | 21 | 0 | 8 | 94 | 16 | 102 | 6.85e-39 | 155 |
| MS.gene024853.t1 | MTR_5g032060 | 56.757 | 111 | 48 | 0 | 13 | 123 | 10 | 120 | 4.12e-35 | 147 |
| MS.gene024853.t1 | MTR_8g471130 | 30.921 | 304 | 165 | 5 | 13 | 279 | 10 | 305 | 6.14e-33 | 139 |
| MS.gene024853.t1 | MTR_5g066340 | 29.818 | 275 | 148 | 6 | 13 | 251 | 10 | 275 | 3.50e-29 | 127 |
| MS.gene024853.t1 | MTR_7g108070 | 41.279 | 172 | 77 | 5 | 14 | 161 | 10 | 181 | 1.25e-26 | 112 |
| MS.gene024853.t1 | MTR_3g100190 | 33.333 | 273 | 121 | 10 | 21 | 244 | 13 | 273 | 2.18e-24 | 112 |
| MS.gene024853.t1 | MTR_1g088965 | 55.696 | 79 | 34 | 1 | 15 | 92 | 17 | 95 | 1.03e-22 | 104 |
| MS.gene024853.t1 | MTR_3g467610 | 51.807 | 83 | 37 | 1 | 34 | 116 | 13 | 92 | 6.41e-19 | 92.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene024853.t1 | AT3G22790 | 41.323 | 1769 | 886 | 27 | 1 | 1658 | 1 | 1728 | 0.0 | 1069 |
| MS.gene024853.t1 | AT3G22790 | 41.323 | 1769 | 886 | 27 | 1 | 1658 | 1 | 1728 | 0.0 | 1069 |
| MS.gene024853.t1 | AT3G22790 | 41.323 | 1769 | 886 | 27 | 1 | 1658 | 1 | 1728 | 0.0 | 1069 |
| MS.gene024853.t1 | AT4G14760 | 39.073 | 1748 | 937 | 23 | 1 | 1658 | 1 | 1710 | 0.0 | 999 |
| MS.gene024853.t1 | AT4G14760 | 39.073 | 1748 | 937 | 23 | 1 | 1658 | 1 | 1710 | 0.0 | 999 |
| MS.gene024853.t1 | AT4G14760 | 39.073 | 1748 | 937 | 23 | 1 | 1658 | 1 | 1710 | 0.0 | 999 |
| MS.gene024853.t1 | AT4G14760 | 39.073 | 1748 | 937 | 23 | 1 | 1658 | 1 | 1710 | 0.0 | 999 |
| MS.gene024853.t1 | AT1G03080 | 33.923 | 1810 | 964 | 27 | 1 | 1656 | 1 | 1732 | 0.0 | 814 |
| MS.gene024853.t1 | AT1G03080 | 33.923 | 1810 | 964 | 27 | 1 | 1656 | 1 | 1732 | 0.0 | 814 |
| MS.gene024853.t1 | AT1G03080 | 33.923 | 1810 | 964 | 27 | 1 | 1656 | 1 | 1732 | 0.0 | 814 |
| MS.gene024853.t1 | AT4G02710 | 38.163 | 566 | 277 | 4 | 1 | 493 | 1 | 566 | 5.43e-116 | 395 |
| MS.gene024853.t1 | AT4G02710 | 27.371 | 464 | 226 | 19 | 1203 | 1642 | 703 | 1079 | 2.90e-23 | 108 |
| MS.gene024853.t1 | AT2G30500 | 65.591 | 93 | 32 | 0 | 7 | 99 | 15 | 107 | 2.42e-36 | 146 |
| MS.gene024853.t1 | AT2G30500 | 65.591 | 93 | 32 | 0 | 7 | 99 | 15 | 107 | 2.42e-36 | 146 |
| MS.gene024853.t1 | AT2G30500 | 65.591 | 93 | 32 | 0 | 7 | 99 | 14 | 106 | 2.59e-36 | 146 |
| MS.gene024853.t1 | AT2G22560 | 37.168 | 226 | 107 | 4 | 13 | 203 | 10 | 235 | 1.47e-33 | 141 |
| MS.gene024853.t1 | AT5G10500 | 55.856 | 111 | 44 | 2 | 13 | 118 | 10 | 120 | 6.06e-33 | 139 |
| MS.gene024853.t1 | AT1G58215 | 28.000 | 525 | 264 | 14 | 13 | 484 | 10 | 473 | 6.78e-33 | 139 |
| MS.gene024853.t1 | AT5G58320 | 62.921 | 89 | 33 | 0 | 8 | 96 | 16 | 104 | 1.13e-29 | 126 |
| MS.gene024853.t1 | AT5G58320 | 62.921 | 89 | 33 | 0 | 8 | 96 | 16 | 104 | 1.13e-29 | 126 |
| MS.gene024853.t1 | AT5G58320 | 62.921 | 89 | 33 | 0 | 8 | 96 | 16 | 104 | 1.35e-29 | 126 |
| MS.gene024853.t1 | AT5G58320 | 62.921 | 89 | 33 | 0 | 8 | 96 | 16 | 104 | 1.35e-29 | 126 |
| MS.gene024853.t1 | AT1G09720 | 55.000 | 100 | 45 | 0 | 13 | 112 | 10 | 109 | 1.83e-29 | 128 |
| MS.gene024853.t1 | AT2G47920 | 60.000 | 75 | 29 | 1 | 15 | 88 | 10 | 84 | 1.21e-24 | 104 |
| MS.gene024853.t1 | AT2G47920 | 60.000 | 75 | 29 | 1 | 15 | 88 | 10 | 84 | 1.21e-24 | 104 |
| MS.gene024853.t1 | AT1G03470 | 51.579 | 95 | 45 | 1 | 15 | 108 | 8 | 102 | 1.50e-24 | 105 |
| MS.gene024853.t1 | AT1G03470 | 51.579 | 95 | 45 | 1 | 15 | 108 | 8 | 102 | 1.50e-24 | 105 |
| MS.gene024853.t1 | AT1G03470 | 51.579 | 95 | 45 | 1 | 15 | 108 | 8 | 102 | 1.50e-24 | 105 |
| MS.gene024853.t1 | AT1G03470 | 51.579 | 95 | 45 | 1 | 15 | 108 | 8 | 102 | 1.50e-24 | 105 |
| MS.gene024853.t1 | AT5G58320 | 65.574 | 61 | 21 | 0 | 36 | 96 | 1 | 61 | 1.13e-18 | 91.7 |
| MS.gene024853.t1 | AT4G03153 | 41.026 | 78 | 41 | 2 | 15 | 87 | 7 | 84 | 1.50e-13 | 72.0 |
Find 241 sgRNAs with CRISPR-Local
Find 369 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GAAGAACACCACACACTTTA+TGG | 0.118574 | 5.3:+1603680 | None:intergenic |
| GTTAAGATCTGTTTCCATTT+TGG | 0.146184 | 5.3:+1605730 | None:intergenic |
| CTTGCTTTGGAGCTTAAATA+TGG | 0.167455 | 5.3:-1604945 | MS.gene024853:CDS |
| ATGTTTCATTTGCTTCATTA+AGG | 0.229175 | 5.3:+1602756 | None:intergenic |
| ATCCTTATCAGACTGGATTT+TGG | 0.232815 | 5.3:+1605793 | None:intergenic |
| GCAATTTCCAAACTTGAATA+TGG | 0.233837 | 5.3:+1601996 | None:intergenic |
| CCAATACATATTGCTGAAAT+TGG | 0.237091 | 5.3:-1601298 | MS.gene024853:CDS |
| TGAAGCGCGACTGGCAAATT+TGG | 0.240493 | 5.3:-1603986 | MS.gene024853:CDS |
| TGGCTTCTGGAAAATCTTAC+AGG | 0.247941 | 5.3:-1607513 | MS.gene024853:intron |
| TCCTGAACACTCCAAGTTCT+TGG | 0.249018 | 5.3:+1603023 | None:intergenic |
| CCTGGAGAAAATATCTAAAA+TGG | 0.258324 | 5.3:-1605279 | MS.gene024853:CDS |
| TTTGGAGAAGTTATCCAAAA+TGG | 0.271104 | 5.3:-1605744 | MS.gene024853:CDS |
| GAAGTTAGCTATTCTTAAAA+TGG | 0.276694 | 5.3:-1601556 | MS.gene024853:CDS |
| CTCTGGTAAGTTCTTGCTTT+AGG | 0.278270 | 5.3:+1605513 | None:intergenic |
| AGTTTACTGGAAAGTGAAAT+TGG | 0.278527 | 5.3:-1602467 | MS.gene024853:CDS |
| GAGAATTAAATCAGGTGATT+TGG | 0.295548 | 5.3:-1604250 | MS.gene024853:CDS |
| AGCTCTAAGCAACCTCAATT+TGG | 0.303357 | 5.3:-1603137 | MS.gene024853:CDS |
| TACAGATGCCGCAAAAGAAT+TGG | 0.304958 | 5.3:+1604617 | None:intergenic |
| TTGCGTGTTTGTGGATGTTC+GGG | 0.306727 | 5.3:-1601207 | MS.gene024853:CDS |
| CTCTTCCTTAAAATCTTGTT+TGG | 0.307809 | 5.3:+1604893 | None:intergenic |
| AATTCCAATATCGCGTATAT+TGG | 0.307942 | 5.3:-1603611 | MS.gene024853:CDS |
| TAGAATCAGAAAGTTTAAAA+TGG | 0.314422 | 5.3:-1603707 | MS.gene024853:CDS |
| CTGAGGATTGAAGTAGTAAA+TGG | 0.318161 | 5.3:-1603364 | MS.gene024853:CDS |
| ACGAAGCTTCGCCTTTAGAT+AGG | 0.321073 | 5.3:-1601377 | MS.gene024853:CDS |
| AGTCCAGACGCTTATATTCT+TGG | 0.322787 | 5.3:-1607572 | MS.gene024853:CDS |
| TAGAGCACATTTCCCGCCTT+TGG | 0.324061 | 5.3:-1602376 | MS.gene024853:CDS |
| ACCAAGAACTTGGAGTGTTC+AGG | 0.325193 | 5.3:-1603024 | MS.gene024853:CDS |
| GAGAGAAATAATCAGTTTAC+TGG | 0.327774 | 5.3:-1602480 | MS.gene024853:CDS |
| ATCATTGTTTAGGAATGTTT+CGG | 0.333177 | 5.3:-1603221 | MS.gene024853:CDS |
| TTTGGCCAGGGCTTCCCTTA+AGG | 0.336813 | 5.3:+1605811 | None:intergenic |
| AAACCGAAATCTTCAGTTAG+AGG | 0.343043 | 5.3:-1605144 | MS.gene024853:CDS |
| TTGTCCAATATACGCGATAT+TGG | 0.344897 | 5.3:+1603607 | None:intergenic |
| AAGTTGAACAACACAGGGTT+AGG | 0.344929 | 5.3:-1602703 | MS.gene024853:CDS |
| ATCGACTCCATATTCAAGTT+TGG | 0.345717 | 5.3:-1602003 | MS.gene024853:CDS |
| CTTGAACAACTACAGAGTTT+AGG | 0.349038 | 5.3:-1604648 | MS.gene024853:CDS |
| TCCACTGTTGGCGCAGATAA+TGG | 0.352338 | 5.3:+1601753 | None:intergenic |
| AGAAAATGAGTTCAAACTTT+GGG | 0.353372 | 5.3:-1602648 | MS.gene024853:CDS |
| TGAAAGTATGCAGAAGATAT+TGG | 0.353641 | 5.3:-1604331 | MS.gene024853:CDS |
| TCTTCAGTACCAGGAGAGTT+TGG | 0.354498 | 5.3:-1605762 | MS.gene024853:CDS |
| CCAAGAGGTTCTGAACAAAT+AGG | 0.357005 | 5.3:-1601348 | MS.gene024853:CDS |
| GGACAAAGAGCTGCTGGAAA+TGG | 0.358674 | 5.3:-1602942 | MS.gene024853:CDS |
| ATGCTCTCGCTTCAAATACT+TGG | 0.370779 | 5.3:+1601827 | None:intergenic |
| GATGCTAAAATTGAGTTTGA+AGG | 0.371878 | 5.3:-1604276 | MS.gene024853:CDS |
| AAGCATTCTAATATCTCAAT+TGG | 0.373775 | 5.3:-1604175 | MS.gene024853:CDS |
| ATGTATTTGACCGCAATTCA+TGG | 0.376359 | 5.3:-1601920 | MS.gene024853:CDS |
| GATGAGAGTGATTCAGCATC+AGG | 0.377145 | 5.3:+1605902 | None:intergenic |
| TCCACTAACTTCATGAGTTC+CGG | 0.377336 | 5.3:+1606073 | None:intergenic |
| GATTCACCATGCGGTTCTTT+AGG | 0.377743 | 5.3:-1605926 | MS.gene024853:CDS |
| CCAATTTCAGCAATATGTAT+TGG | 0.380000 | 5.3:+1601298 | None:intergenic |
| AAAGAATTCAAAATGGCTTC+TGG | 0.380490 | 5.3:-1607526 | MS.gene024853:CDS |
| CAGTTGACATTGCATCTTTG+AGG | 0.381285 | 5.3:+1603197 | None:intergenic |
| TGCCATCGTTCAGATGATTC+TGG | 0.382173 | 5.3:-1601717 | MS.gene024853:CDS |
| GCTAAAAGAAGACTGCAAAA+AGG | 0.383534 | 5.3:-1604568 | MS.gene024853:CDS |
| TCTAAATTACTCCTCAGAAT+TGG | 0.384969 | 5.3:-1601688 | MS.gene024853:CDS |
| GTCTACTTTGGCAGCTCTGC+AGG | 0.385523 | 5.3:-1603317 | MS.gene024853:CDS |
| GACGCTTATATTCTTGGTGG+TGG | 0.386296 | 5.3:-1607566 | MS.gene024853:CDS |
| CAGCCTCTAACTGAAGATTT+CGG | 0.390968 | 5.3:+1605141 | None:intergenic |
| GCAAAATTGTATTGAAGAGT+TGG | 0.392630 | 5.3:-1603860 | MS.gene024853:CDS |
| TGATTTCTCATCAGCAAGAA+TGG | 0.397258 | 5.3:+1604383 | None:intergenic |
| ACCTTGCTGAGGAGAATTCC+AGG | 0.397551 | 5.3:-1605412 | MS.gene024853:CDS |
| GGTTAAGGTCATTGTTCAAA+TGG | 0.398571 | 5.3:+1603044 | None:intergenic |
| CATCGTTTCTTCTTTAAAAG+AGG | 0.398683 | 5.3:-1602411 | MS.gene024853:CDS |
| GCTGAGTTGGGAAATGCTTC+TGG | 0.399256 | 5.3:+1605968 | None:intergenic |
| ATTGCGTGTTTGTGGATGTT+CGG | 0.400094 | 5.3:-1601208 | MS.gene024853:CDS |
| GGAAGAGATGCAAGAGATTG+TGG | 0.402505 | 5.3:-1604877 | MS.gene024853:CDS |
| AGTTAATCCTCATTAGTTGA+TGG | 0.404823 | 5.3:+1601183 | None:intergenic |
| GCATGAAACTCATCAAATAA+AGG | 0.413368 | 5.3:-1604709 | MS.gene024853:CDS |
| ATTTGAAGCGAGAGCATAGA+AGG | 0.414336 | 5.3:-1601821 | MS.gene024853:CDS |
| ATGGTGAAGTTCAAACCTTA+AGG | 0.418626 | 5.3:-1605826 | MS.gene024853:CDS |
| CAAGTGTTTCAAGAAGAAAA+TGG | 0.420204 | 5.3:-1603265 | MS.gene024853:CDS |
| ATTGGACAAAATTGAGAGCT+TGG | 0.424439 | 5.3:-1603593 | MS.gene024853:CDS |
| ACACTCCAAGTTCTTGGTTA+AGG | 0.427564 | 5.3:+1603029 | None:intergenic |
| ACAGATGCCGCAAAAGAATT+GGG | 0.427925 | 5.3:+1604618 | None:intergenic |
| GCTTCGTCTGTTGAAGGACT+TGG | 0.429617 | 5.3:-1604922 | MS.gene024853:CDS |
| TCAAATTGAATCAGCTCTAC+AGG | 0.429684 | 5.3:-1605012 | MS.gene024853:CDS |
| AGATGACAAGAGGAGGATCT+TGG | 0.431001 | 5.3:-1601601 | MS.gene024853:CDS |
| AAGAAAATGAGTTCAAACTT+TGG | 0.431099 | 5.3:-1602649 | MS.gene024853:CDS |
| GAAGGTTTGAGAATTAAATC+AGG | 0.432749 | 5.3:-1604258 | MS.gene024853:CDS |
| TTGAACTTCTAGAGGAGAAC+AGG | 0.433283 | 5.3:-1603390 | MS.gene024853:CDS |
| CCTATTTGTTCAGAACCTCT+TGG | 0.433422 | 5.3:+1601348 | None:intergenic |
| CTTCAGCTCCTCAATATGTC+TGG | 0.433503 | 5.3:+1602877 | None:intergenic |
| ATTGGACATAGAGAAGGAAT+TGG | 0.436742 | 5.3:-1601670 | MS.gene024853:CDS |
| TAGAATGTAATATGCTGAGT+TGG | 0.437923 | 5.3:+1605955 | None:intergenic |
| ATTGGAGAATAATACCTTGC+TGG | 0.438016 | 5.3:-1604313 | MS.gene024853:CDS |
| GACTGCAAACTCTGATGCAT+GGG | 0.439795 | 5.3:-1605052 | MS.gene024853:CDS |
| AGAATGTAATATGCTGAGTT+GGG | 0.440026 | 5.3:+1605956 | None:intergenic |
| TGATAAAGTAATTTCGGAGC+TGG | 0.440893 | 5.3:-1603776 | MS.gene024853:CDS |
| ATATGGGCTTCGTCTGTTGA+AGG | 0.446717 | 5.3:-1604928 | MS.gene024853:CDS |
| TGAAAAGAAGGTTACAAAGT+TGG | 0.446886 | 5.3:-1604124 | MS.gene024853:CDS |
| TTGCTTTGGAGCTTAAATAT+GGG | 0.447982 | 5.3:-1604944 | MS.gene024853:CDS |
| TGGTGAAGTTCAAACCTTAA+GGG | 0.449648 | 5.3:-1605825 | MS.gene024853:CDS |
| AGAAGGAAATTGCGTGTTTG+TGG | 0.450411 | 5.3:-1601216 | MS.gene024853:CDS |
| AATTTGATCATTAAGCATCC+TGG | 0.454222 | 5.3:+1605394 | None:intergenic |
| GAGAGATACGATCATGCAAT+GGG | 0.454331 | 5.3:-1606019 | MS.gene024853:CDS |
| AGTAAGTATAAATGATCAAA+TGG | 0.457953 | 5.3:-1601415 | MS.gene024853:CDS |
| AGCAAGGTTACTGAGCTTAC+TGG | 0.458049 | 5.3:-1602560 | MS.gene024853:CDS |
| GGACTGAATGATGAGTTAGA+TGG | 0.458324 | 5.3:-1604465 | MS.gene024853:CDS |
| GGAGCAAAGAAATCTTGCTT+TGG | 0.462130 | 5.3:-1604958 | MS.gene024853:CDS |
| ATAGTCCAAAGAATTCAAAA+TGG | 0.462610 | 5.3:-1607533 | MS.gene024853:CDS |
| ACACTCAAGTGAAGCGCGAC+TGG | 0.463044 | 5.3:-1603995 | MS.gene024853:CDS |
| AATAGGAAAGTTGCAGTTTG+AGG | 0.464053 | 5.3:-1601331 | MS.gene024853:CDS |
| TCTTGAAAAGATTCCAATGT+TGG | 0.464403 | 5.3:-1605447 | MS.gene024853:CDS |
| ATGGCTATGTTTCCGAAGAC+AGG | 0.465754 | 5.3:+1602169 | None:intergenic |
| TTTGATGGAAAATGCCTGTA+TGG | 0.469152 | 5.3:-1604502 | MS.gene024853:CDS |
| CTACAGGAAGAACAGCGGTT+GGG | 0.470417 | 5.3:-1603946 | MS.gene024853:CDS |
| TCTAGAAACTATAGCTAGAC+TGG | 0.470639 | 5.3:-1605576 | MS.gene024853:CDS |
| AGCAGATTCATTTGCAAGGA+GGG | 0.470880 | 5.3:-1606119 | MS.gene024853:CDS |
| GTAGAGAACTCTGTCCTCAT+AGG | 0.474140 | 5.3:-1603526 | MS.gene024853:CDS |
| ATAAGGATGCCGGTGAAGTT+CGG | 0.474892 | 5.3:-1605610 | MS.gene024853:CDS |
| TGTCCTTTACCATCACTGCC+TGG | 0.476564 | 5.3:-1605297 | MS.gene024853:CDS |
| ACTAAGTAACCTTGAAAAGA+AGG | 0.478266 | 5.3:-1604136 | MS.gene024853:CDS |
| GAGACTCGATGATGAAAGTT+CGG | 0.479116 | 5.3:-1602528 | MS.gene024853:CDS |
| AATGGAAATCTCTAAGTTGA+AGG | 0.480099 | 5.3:-1604793 | MS.gene024853:CDS |
| CAGACAGATTCTTGAACAAT+CGG | 0.480977 | 5.3:-1602813 | MS.gene024853:CDS |
| TTGAATTCTTTGGACTATTG+TGG | 0.481281 | 5.3:+1607538 | None:intergenic |
| AATTCAAGTCGTAATATTGA+AGG | 0.485384 | 5.3:-1605657 | MS.gene024853:CDS |
| TTTAGCACTGTTAGAAAGCA+AGG | 0.486773 | 5.3:-1602576 | MS.gene024853:CDS |
| TGCTCTCTTTCTTCAGTACC+AGG | 0.487980 | 5.3:-1605771 | MS.gene024853:CDS |
| AAATAGATCAAAGTCTACTT+TGG | 0.489817 | 5.3:-1603329 | MS.gene024853:CDS |
| TTGGAGAGGCTTTCCTCGGA+TGG | 0.491217 | 5.3:-1601582 | MS.gene024853:CDS |
| AGCTGCTGGAAATGGAGAAA+AGG | 0.491750 | 5.3:-1602934 | MS.gene024853:CDS |
| AGAGCACTTTGTGAACATCT+TGG | 0.491901 | 5.3:-1603076 | MS.gene024853:CDS |
| GAGGATGGACAAAGAGCTGC+TGG | 0.492868 | 5.3:-1602948 | MS.gene024853:CDS |
| CAGGGTTAGGGAAGAAGCAC+TGG | 0.498072 | 5.3:-1602690 | MS.gene024853:CDS |
| CTGCTAACGCACGGTATGCT+CGG | 0.498305 | 5.3:+1606041 | None:intergenic |
| TTTGATGAGTTTCATGCTTG+AGG | 0.499392 | 5.3:+1604715 | None:intergenic |
| GTTGTACTCTCAATCACAAA+AGG | 0.500411 | 5.3:-1604979 | MS.gene024853:CDS |
| GATCTTGGAGAGGCTTTCCT+CGG | 0.500969 | 5.3:-1601586 | MS.gene024853:CDS |
| GGTAGGCAATGGAGCGCAAA+AGG | 0.501322 | 5.3:-1602336 | MS.gene024853:intron |
| GGCCAAAATCCAGTCTGATA+AGG | 0.502051 | 5.3:-1605795 | MS.gene024853:CDS |
| AAGACATATAGAAGAAGTTG+AGG | 0.504227 | 5.3:-1601454 | MS.gene024853:CDS |
| TTGGACATAGAGAAGGAATT+GGG | 0.505480 | 5.3:-1601669 | MS.gene024853:CDS |
| CGAAGCTTCGCCTTTAGATA+GGG | 0.506565 | 5.3:-1601376 | MS.gene024853:CDS |
| TACAGGAAGAACAGCGGTTG+GGG | 0.507538 | 5.3:-1603945 | MS.gene024853:CDS |
| AATGACCTTAACCAAGAACT+TGG | 0.508324 | 5.3:-1603034 | MS.gene024853:CDS |
| CCAGACGCTTATATTCTTGG+TGG | 0.508563 | 5.3:-1607569 | MS.gene024853:CDS |
| TAACAGAGAAAATTCCATAC+AGG | 0.513474 | 5.3:+1604488 | None:intergenic |
| CTGAGGAAAACAACAACAAA+GGG | 0.513621 | 5.3:-1601275 | MS.gene024853:CDS |
| AGCAAATCTGAAACTCCATC+TGG | 0.515437 | 5.3:+1602113 | None:intergenic |
| CCACCAAGAATATAAGCGTC+TGG | 0.522303 | 5.3:+1607569 | None:intergenic |
| GCCGGAACTCATGAAGTTAG+TGG | 0.523321 | 5.3:-1606074 | MS.gene024853:CDS |
| AGAAATTCTGTGGTAGGCAA+TGG | 0.523726 | 5.3:-1602347 | MS.gene024853:CDS |
| TCAAATTGAAAGAACAGAGC+TGG | 0.523888 | 5.3:-1605378 | MS.gene024853:CDS |
| GATGCAGCTAAAAGCAGATA+AGG | 0.526767 | 5.3:-1605627 | MS.gene024853:CDS |
| GAATTTCAGCTTCACTTGCT+CGG | 0.526802 | 5.3:+1605675 | None:intergenic |
| GGAAGAACAGCGGTTGGGGA+AGG | 0.528099 | 5.3:-1603941 | MS.gene024853:CDS |
| CTTGGAATCTCCCTATCTAA+AGG | 0.529912 | 5.3:+1601366 | None:intergenic |
| ATTTGCTGACATTGCAGACA+AGG | 0.530180 | 5.3:-1602097 | MS.gene024853:CDS |
| GCTGGAAATGGAGAAAAGGC+TGG | 0.530415 | 5.3:-1602930 | MS.gene024853:CDS |
| AGACTGCAAACTCTGATGCA+TGG | 0.530484 | 5.3:-1605053 | MS.gene024853:CDS |
| ACATATTGAGGAGCTGAAGA+TGG | 0.533144 | 5.3:-1602873 | MS.gene024853:CDS |
| TCAAACCTTAAGGGAAGCCC+TGG | 0.533697 | 5.3:-1605816 | MS.gene024853:CDS |
| TAGTGATTGAGACCTGTCTT+CGG | 0.534595 | 5.3:-1602181 | MS.gene024853:CDS |
| GTTCAAACTTTGGGAGAATG+AGG | 0.536840 | 5.3:-1602639 | MS.gene024853:CDS |
| AAACAGGTATATTGTTGAGA+AGG | 0.538708 | 5.3:-1601233 | MS.gene024853:CDS |
| ATCATAGCATGGTCCACTGT+TGG | 0.538724 | 5.3:+1601741 | None:intergenic |
| AGAGAGCATCCTTATCAGAC+TGG | 0.539401 | 5.3:+1605786 | None:intergenic |
| GAATGAGTCAACTGAGAGGA+TGG | 0.539681 | 5.3:-1602963 | MS.gene024853:CDS |
| ACAAAGAAGAAAAGCAAGCA+AGG | 0.540703 | 5.3:-1601504 | MS.gene024853:CDS |
| CTGATTGTACCGAACTTCAC+CGG | 0.542922 | 5.3:+1605601 | None:intergenic |
| AGCAGTTGAAAAGATTATGA+TGG | 0.543384 | 5.3:-1602069 | MS.gene024853:CDS |
| GAAAGTGTGTTAATACCAGA+TGG | 0.545253 | 5.3:-1602128 | MS.gene024853:CDS |
| GAATCTAGTCCACGTACTAC+AGG | 0.548695 | 5.3:-1603962 | MS.gene024853:CDS |
| GATTGAAGTAGTAAATGGAC+TGG | 0.549223 | 5.3:-1603359 | MS.gene024853:CDS |
| TGCTTAGAGCTAGTACCTCA+TGG | 0.550458 | 5.3:+1603149 | None:intergenic |
| GGAGTCAATGTTATCTCAGA+AGG | 0.551468 | 5.3:-1605555 | MS.gene024853:CDS |
| ATAACTTCTCCAAACTCTCC+TGG | 0.555879 | 5.3:+1605753 | None:intergenic |
| CTTCTCTATGTCCAATTCTG+AGG | 0.557116 | 5.3:+1601677 | None:intergenic |
| CATATTGCTGAAATTGGCTG+AGG | 0.557283 | 5.3:-1601292 | MS.gene024853:CDS |
| AAGTGAAATTGGAGAACTGA+AGG | 0.558589 | 5.3:-1602456 | MS.gene024853:CDS |
| ACTAAAAGAAATTCTGTGGT+AGG | 0.558630 | 5.3:-1602353 | MS.gene024853:CDS |
| CTTCACTTGCTCGGTCATCA+AGG | 0.559018 | 5.3:+1605684 | None:intergenic |
| TGGATTGAGAGGAACAGTGA+AGG | 0.560139 | 5.3:-1604445 | MS.gene024853:CDS |
| AATGATCAAGCTCATTGAAG+AGG | 0.561562 | 5.3:-1606143 | MS.gene024853:CDS |
| CTTCAGATTGATTCAGACGG+AGG | 0.562174 | 5.3:-1603661 | MS.gene024853:CDS |
| TCATCCACATTGCGATCAAG+TGG | 0.569692 | 5.3:+1601858 | None:intergenic |
| TTCTCTAGTGAAAAGTCAAG+AGG | 0.570064 | 5.3:-1603566 | MS.gene024853:CDS |
| ACTACAGGAAGAACAGCGGT+TGG | 0.571147 | 5.3:-1603947 | MS.gene024853:CDS |
| TCTCCAGGCAGTGATGGTAA+AGG | 0.571181 | 5.3:+1605294 | None:intergenic |
| AGCTCTCATAAACCAAATTG+AGG | 0.574202 | 5.3:+1603125 | None:intergenic |
| GATGAGTTAGATGGATTGAG+AGG | 0.575363 | 5.3:-1604456 | MS.gene024853:CDS |
| ACCATTATCTGCGCCAACAG+TGG | 0.576959 | 5.3:-1601754 | MS.gene024853:CDS |
| AGTTGAACAACACAGGGTTA+GGG | 0.579217 | 5.3:-1602702 | MS.gene024853:CDS |
| TTCATGAAGTTGAACAACAC+AGG | 0.579740 | 5.3:-1602709 | MS.gene024853:CDS |
| AGCTAACTTCTGACCATCCG+AGG | 0.580497 | 5.3:+1601569 | None:intergenic |
| TACCAGAGTGGTAGTTCAGA+AGG | 0.583243 | 5.3:-1605498 | MS.gene024853:CDS |
| TTGGACTAAAAGAAATTCTG+TGG | 0.583886 | 5.3:-1602357 | MS.gene024853:CDS |
| CTAAAAGCAGATAAGGATGC+CGG | 0.584614 | 5.3:-1605620 | MS.gene024853:CDS |
| TCCTGGAATTCTCCTCAGCA+AGG | 0.585346 | 5.3:+1605411 | None:intergenic |
| AGAGAGATACGATCATGCAA+TGG | 0.585492 | 5.3:-1606020 | MS.gene024853:CDS |
| ACGCTTATATTCTTGGTGGT+GGG | 0.586298 | 5.3:-1607565 | MS.gene024853:CDS |
| CTCAGAATTGGACATAGAGA+AGG | 0.586349 | 5.3:-1601676 | MS.gene024853:CDS |
| AGCTGGAAGTTGAAACATTG+AGG | 0.587073 | 5.3:-1605361 | MS.gene024853:CDS |
| GCTGCTGAAGTGAACCTATG+AGG | 0.587509 | 5.3:+1603512 | None:intergenic |
| TTCAGATTGATTCAGACGGA+GGG | 0.591610 | 5.3:-1603660 | MS.gene024853:CDS |
| TTCGGGGCCATCAACTAATG+AGG | 0.597090 | 5.3:-1601190 | MS.gene024853:CDS |
| AGGAAGCAGATTCATTTGCA+AGG | 0.599111 | 5.3:-1606123 | MS.gene024853:CDS |
| AGGCTGAAAATTTAGTGCAG+AGG | 0.599417 | 5.3:-1605124 | MS.gene024853:CDS |
| GTTCTTCAGATTGATTCAGA+CGG | 0.599426 | 5.3:-1603664 | MS.gene024853:CDS |
| AGATAAAGTTGAACTTCTAG+AGG | 0.607959 | 5.3:-1603398 | MS.gene024853:CDS |
| AACTTAACTTCTCTTCCACC+AGG | 0.608738 | 5.3:-1604833 | MS.gene024853:CDS |
| CTTCAGCAGCATCAATCTGA+GGG | 0.616282 | 5.3:-1603499 | MS.gene024853:CDS |
| ACTTCAGCAGCATCAATCTG+AGG | 0.617113 | 5.3:-1603500 | MS.gene024853:CDS |
| AGAAAACTGAAGATGACAAG+AGG | 0.617447 | 5.3:-1601611 | MS.gene024853:CDS |
| TAGAGGAGAACAGGCAACTG+AGG | 0.619446 | 5.3:-1603381 | MS.gene024853:CDS |
| GCTGAGGAAAACAACAACAA+AGG | 0.622467 | 5.3:-1601276 | MS.gene024853:CDS |
| AAACTGAAGATGACAAGAGG+AGG | 0.626445 | 5.3:-1601608 | MS.gene024853:CDS |
| CAGAAATGTACTATAAGAAG+CGG | 0.627422 | 5.3:-1606096 | MS.gene024853:CDS |
| ATCCTTCTGAACTACCACTC+TGG | 0.627692 | 5.3:+1605496 | None:intergenic |
| ATGAGAGTGATTCAGCATCA+GGG | 0.629773 | 5.3:+1605903 | None:intergenic |
| ACTTTGGGAGAATGAGGCTG+CGG | 0.631172 | 5.3:-1602633 | MS.gene024853:CDS |
| AATGTACTATAAGAAGCGGC+CGG | 0.632296 | 5.3:-1606092 | MS.gene024853:CDS |
| GAACAAAATAAACCTTGCTG+AGG | 0.634726 | 5.3:-1605423 | MS.gene024853:CDS |
| TTCCAGAATCATCTGAACGA+TGG | 0.639813 | 5.3:+1601715 | None:intergenic |
| TGAATATGGAGTCGATTCTG+TGG | 0.641959 | 5.3:+1602010 | None:intergenic |
| CTAAATGATGATTCACCATG+CGG | 0.648235 | 5.3:-1605935 | MS.gene024853:CDS |
| AACGATGGCAGATCATAGCA+TGG | 0.653931 | 5.3:+1601730 | None:intergenic |
| TCATGAAGTTGAACAACACA+GGG | 0.656703 | 5.3:-1602708 | MS.gene024853:CDS |
| AAGGCACAAAATAATGCTAG+AGG | 0.660058 | 5.3:-1605707 | MS.gene024853:CDS |
| ACAAGAGGAGGATCTTGGAG+AGG | 0.666942 | 5.3:-1601596 | MS.gene024853:CDS |
| CGTATCTCTCTGCTAACGCA+CGG | 0.666945 | 5.3:+1606032 | None:intergenic |
| AAGCAGATTCATTTGCAAGG+AGG | 0.667881 | 5.3:-1606120 | MS.gene024853:CDS |
| GAGATACGATCATGCAATGG+GGG | 0.670489 | 5.3:-1606017 | MS.gene024853:CDS |
| AGTGAAATTGGAGAACTGAA+GGG | 0.674625 | 5.3:-1602455 | MS.gene024853:CDS |
| TCAGGGCCTAAAGAACCGCA+TGG | 0.677474 | 5.3:+1605920 | None:intergenic |
| ACTGCAAACTCTGATGCATG+GGG | 0.682602 | 5.3:-1605051 | MS.gene024853:CDS |
| AGGCTGAGATGATAGAATTG+CGG | 0.685463 | 5.3:-1603297 | MS.gene024853:CDS |
| CATTCCACTTGATCGCAATG+TGG | 0.687381 | 5.3:-1601862 | MS.gene024853:CDS |
| TTAGATAGGGAGATTCCAAG+AGG | 0.692741 | 5.3:-1601363 | MS.gene024853:CDS |
| GCTGTTCTTCCTGTAGTACG+TGG | 0.694339 | 5.3:+1603953 | None:intergenic |
| GGAACTCATGAAGTTAGTGG+AGG | 0.698000 | 5.3:-1606071 | MS.gene024853:CDS |
| ATGGATATCCATAAAGTGTG+TGG | 0.698783 | 5.3:-1603688 | MS.gene024853:CDS |
| GGAAATGGAGAAAAGGCTGG+AGG | 0.704636 | 5.3:-1602927 | MS.gene024853:CDS |
| AGAGATACGATCATGCAATG+GGG | 0.707004 | 5.3:-1606018 | MS.gene024853:CDS |
| ATCTGAATGAGTCAACTGAG+AGG | 0.716151 | 5.3:-1602967 | MS.gene024853:CDS |
| AAAGCAAGAACTTACCAGAG+TGG | 0.717213 | 5.3:-1605510 | MS.gene024853:CDS |
| TCTGGACTCAGATTCTGACA+AGG | 0.717887 | 5.3:+1607587 | None:intergenic |
| AATGGAAACAGATCTTAACA+AGG | 0.722210 | 5.3:-1605726 | MS.gene024853:CDS |
| TGCGTGTTTGTGGATGTTCG+GGG | 0.733508 | 5.3:-1601206 | MS.gene024853:CDS |
| GAACAGTGCAATGTTCCATG+AGG | 0.738461 | 5.3:-1603164 | MS.gene024853:CDS |
| ACGTACTACAGGAAGAACAG+CGG | 0.777669 | 5.3:-1603951 | MS.gene024853:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GAAATTTACTAAATTATATT+AGG | + | chr5.3:1602461-1602480 | None:intergenic | 10.0% |
| !! | TTAGAGATATAAATATTTAT+AGG | - | chr5.3:1602029-1602048 | MS.gene024853:CDS | 10.0% |
| !!! | AATTTTGTTTTTTAGTTGTT+CGG | + | chr5.3:1603556-1603575 | None:intergenic | 15.0% |
| !!! | AGCATAATATGAAATTTTAA+TGG | + | chr5.3:1602587-1602606 | None:intergenic | 15.0% |
| !!! | ATTTTCTGATAAAGTAATTT+CGG | - | chr5.3:1604997-1605016 | MS.gene024853:CDS | 15.0% |
| !! | AAAAAACAAAATTGAGAAAG+AGG | - | chr5.3:1603563-1603582 | MS.gene024853:CDS | 20.0% |
| !! | AAAAGTTGACAATAGAAAAA+AGG | - | chr5.3:1606815-1606834 | MS.gene024853:intron | 20.0% |
| !! | AAATATTATTAAGGTAGCTT+CGG | - | chr5.3:1601550-1601569 | MS.gene024853:CDS | 20.0% |
| !! | AAATTATATTAGGGAATACA+GGG | + | chr5.3:1602451-1602470 | None:intergenic | 20.0% |
| !! | AGTAAGTATAAATGATCAAA+TGG | - | chr5.3:1607364-1607383 | MS.gene024853:intron | 20.0% |
| !! | CCTTCTGTAAAATATTATTA+AGG | - | chr5.3:1601541-1601560 | MS.gene024853:CDS | 20.0% |
| !! | GTTGATATTTATAGAGTATA+AGG | + | chr5.3:1601617-1601636 | None:intergenic | 20.0% |
| !! | TAAATTATATTAGGGAATAC+AGG | + | chr5.3:1602452-1602471 | None:intergenic | 20.0% |
| !! | TAAGAATTTACAAGATAGAA+TGG | + | chr5.3:1602496-1602515 | None:intergenic | 20.0% |
| !! | TAATTCATTGAAACATTCTT+TGG | - | chr5.3:1601959-1601978 | MS.gene024853:CDS | 20.0% |
| !! | TAGAATCAGAAAGTTTAAAA+TGG | - | chr5.3:1605072-1605091 | MS.gene024853:CDS | 20.0% |
| !!! | AAAATCAAAAGAAGTTTTGA+TGG | - | chr5.3:1604262-1604281 | MS.gene024853:CDS | 20.0% |
| !!! | ATATTTTTGAGAGACTAATT+TGG | + | chr5.3:1601860-1601879 | None:intergenic | 20.0% |
| !!! | ATTCAGATAAATCATTTTGT+TGG | - | chr5.3:1601692-1601711 | MS.gene024853:CDS | 20.0% |
| !!! | CCTTAATAATATTTTACAGA+AGG | + | chr5.3:1601544-1601563 | None:intergenic | 20.0% |
| !!! | GTATATTAATATTTTTGTCC+AGG | - | chr5.3:1606572-1606591 | MS.gene024853:intron | 20.0% |
| !!! | TATGTGGAAAGTTATTATTT+TGG | + | chr5.3:1601501-1601520 | None:intergenic | 20.0% |
| !!! | TTCATCAATAACCTTATTTT+AGG | + | chr5.3:1606894-1606913 | None:intergenic | 20.0% |
| !!! | TTTTTTCTATTGTCAACTTT+TGG | + | chr5.3:1606816-1606835 | None:intergenic | 20.0% |
| ! | AAAGATTAACAACAAGCTTT+AGG | + | chr5.3:1602322-1602341 | None:intergenic | 25.0% |
| ! | AAATAGATCAAAGTCTACTT+TGG | - | chr5.3:1605450-1605469 | MS.gene024853:CDS | 25.0% |
| ! | AAGAAAATGAGTTCAAACTT+TGG | - | chr5.3:1606130-1606149 | MS.gene024853:CDS | 25.0% |
| ! | AAGCATTCTAATATCTCAAT+TGG | - | chr5.3:1604604-1604623 | MS.gene024853:CDS | 25.0% |
| ! | AATAGAATATCTCGAAAAAC+AGG | - | chr5.3:1607530-1607549 | MS.gene024853:CDS | 25.0% |
| ! | AATTCAAGTCGTAATATTGA+AGG | - | chr5.3:1603122-1603141 | MS.gene024853:CDS | 25.0% |
| ! | ACAAGACTTGAAAAAGAAAA+CGG | - | chr5.3:1607250-1607269 | MS.gene024853:intron | 25.0% |
| ! | ACATAATAAGTTCGTTGTTT+GGG | - | chr5.3:1602224-1602243 | MS.gene024853:intron | 25.0% |
| ! | ACGAGAAAAAATCATTGTTT+AGG | - | chr5.3:1605548-1605567 | MS.gene024853:CDS | 25.0% |
| ! | AGAAAATGAGTTCAAACTTT+GGG | - | chr5.3:1606131-1606150 | MS.gene024853:CDS | 25.0% |
| ! | ATAGTCCAAAGAATTCAAAA+TGG | - | chr5.3:1601246-1601265 | MS.gene024853:CDS | 25.0% |
| ! | ATATAGTTGAATCTCACTTT+AGG | - | chr5.3:1602193-1602212 | MS.gene024853:intron | 25.0% |
| ! | ATCATTGTTTAGGAATGTTT+CGG | - | chr5.3:1605558-1605577 | MS.gene024853:CDS | 25.0% |
| ! | ATCGATCAAAAAAGAATGAA+AGG | - | chr5.3:1602914-1602933 | MS.gene024853:CDS | 25.0% |
| ! | ATGTTTCATTTGCTTCATTA+AGG | + | chr5.3:1606026-1606045 | None:intergenic | 25.0% |
| ! | CGACAAATGTATATCTTTAA+AGG | - | chr5.3:1601934-1601953 | MS.gene024853:CDS | 25.0% |
| ! | GAAGTTAGCTATTCTTAAAA+TGG | - | chr5.3:1607223-1607242 | MS.gene024853:intron | 25.0% |
| ! | GGAGAAAAAAACCTAAAATA+AGG | - | chr5.3:1606880-1606899 | MS.gene024853:intron | 25.0% |
| ! | GTTAGTTGTTAAATTATTCG+CGG | - | chr5.3:1601393-1601412 | MS.gene024853:CDS | 25.0% |
| ! | GTTTAGCAAAAGAACAAATT+TGG | + | chr5.3:1601885-1601904 | None:intergenic | 25.0% |
| ! | TAGTAAATTTCACTGCAAAA+TGG | - | chr5.3:1602470-1602489 | MS.gene024853:CDS | 25.0% |
| ! | TGCAACAAATTATACAAATC+TGG | + | chr5.3:1601667-1601686 | None:intergenic | 25.0% |
| ! | TTATAGAGTATAAGGATGTA+TGG | + | chr5.3:1601609-1601628 | None:intergenic | 25.0% |
| ! | TTTACTACACCTATTATCTA+TGG | - | chr5.3:1602341-1602360 | MS.gene024853:CDS | 25.0% |
| !! | AATCATTTTGTTGGAGAAAT+AGG | - | chr5.3:1601701-1601720 | MS.gene024853:CDS | 25.0% |
| !! | ACTTTCCAAACAAGATTTTA+AGG | - | chr5.3:1603881-1603900 | MS.gene024853:CDS | 25.0% |
| !! | AGAACTTTTTGCTTCAATTT+TGG | - | chr5.3:1604733-1604752 | MS.gene024853:CDS | 25.0% |
| !! | ATCATTTTGTTGGAGAAATA+GGG | - | chr5.3:1601702-1601721 | MS.gene024853:CDS | 25.0% |
| !! | ATGAAATAAAACTTGCTTGT+TGG | - | chr5.3:1602268-1602287 | MS.gene024853:intron | 25.0% |
| !!! | ACTTTTAGCTATTACATATC+TGG | - | chr5.3:1602369-1602388 | MS.gene024853:CDS | 25.0% |
| !!! | CAAGCAAGTTTTATTTCATT+AGG | + | chr5.3:1602267-1602286 | None:intergenic | 25.0% |
| !!! | TCTTTTAAAGAAGAAACGAT+GGG | + | chr5.3:1606369-1606388 | None:intergenic | 25.0% |
| !!! | TGGAAAGTTATTATTTTGGT+AGG | + | chr5.3:1601497-1601516 | None:intergenic | 25.0% |
| !!! | TTCTTTTTTGATCGATGAAT+TGG | + | chr5.3:1602910-1602929 | None:intergenic | 25.0% |
| !!! | TTTAATGGACTAAACTATAG+AGG | + | chr5.3:1602572-1602591 | None:intergenic | 25.0% |
| !!! | TTTATTTTGTTCTCCAACAT+TGG | + | chr5.3:1603348-1603367 | None:intergenic | 25.0% |
| AAAAAAGGAGATTGAACTTG+TGG | - | chr5.3:1606830-1606849 | MS.gene024853:intron | 30.0% | |
| AAACAGGTATATTGTTGAGA+AGG | - | chr5.3:1607546-1607565 | MS.gene024853:CDS | 30.0% | |
| AAAGAATTCAAAATGGCTTC+TGG | - | chr5.3:1601253-1601272 | MS.gene024853:CDS | 30.0% | |
| AAGACATATAGAAGAAGTTG+AGG | - | chr5.3:1607325-1607344 | MS.gene024853:intron | 30.0% | |
| AAGTATGCACCATAGATAAT+AGG | + | chr5.3:1602353-1602372 | None:intergenic | 30.0% | |
| AATGGAAACAGATCTTAACA+AGG | - | chr5.3:1603053-1603072 | MS.gene024853:CDS | 30.0% | |
| AATTCCAATATCGCGTATAT+TGG | - | chr5.3:1605168-1605187 | MS.gene024853:CDS | 30.0% | |
| AATTTGATCATTAAGCATCC+TGG | + | chr5.3:1603388-1603407 | None:intergenic | 30.0% | |
| ACTAAAAGAAATTCTGTGGT+AGG | - | chr5.3:1606426-1606445 | MS.gene024853:intron | 30.0% | |
| ACTAAGTAACCTTGAAAAGA+AGG | - | chr5.3:1604643-1604662 | MS.gene024853:CDS | 30.0% | |
| AGAATGTAATATGCTGAGTT+GGG | + | chr5.3:1602826-1602845 | None:intergenic | 30.0% | |
| AGATAAAGTTGAACTTCTAG+AGG | - | chr5.3:1605381-1605400 | MS.gene024853:CDS | 30.0% | |
| AGCAGTTGAAAAGATTATGA+TGG | - | chr5.3:1606710-1606729 | MS.gene024853:intron | 30.0% | |
| AGGAGTTCAGAAAAATCTAA+TGG | - | chr5.3:1602934-1602953 | MS.gene024853:CDS | 30.0% | |
| AGTTTACTGGAAAGTGAAAT+TGG | - | chr5.3:1606312-1606331 | MS.gene024853:intron | 30.0% | |
| ATTCTGATCGAATAAATCCA+TGG | + | chr5.3:1602092-1602111 | None:intergenic | 30.0% | |
| ATTGAGGAAAAATCTTTCTG+AGG | - | chr5.3:1603434-1603453 | MS.gene024853:CDS | 30.0% | |
| CAAGTGTTTCAAGAAGAAAA+TGG | - | chr5.3:1605514-1605533 | MS.gene024853:CDS | 30.0% | |
| CAGAAATGTACTATAAGAAG+CGG | - | chr5.3:1602683-1602702 | MS.gene024853:CDS | 30.0% | |
| CCAATACATATTGCTGAAAT+TGG | - | chr5.3:1607481-1607500 | MS.gene024853:intron | 30.0% | |
| CCAATTTCAGCAATATGTAT+TGG | + | chr5.3:1607484-1607503 | None:intergenic | 30.0% | |
| CCTGGAGAAAATATCTAAAA+TGG | - | chr5.3:1603500-1603519 | MS.gene024853:CDS | 30.0% | |
| CTCTTCCTTAAAATCTTGTT+TGG | + | chr5.3:1603889-1603908 | None:intergenic | 30.0% | |
| GAAGGTTTGAGAATTAAATC+AGG | - | chr5.3:1604521-1604540 | MS.gene024853:CDS | 30.0% | |
| GACATAATAAGTTCGTTGTT+TGG | - | chr5.3:1602223-1602242 | MS.gene024853:intron | 30.0% | |
| GAGAATTAAATCAGGTGATT+TGG | - | chr5.3:1604529-1604548 | MS.gene024853:CDS | 30.0% | |
| GAGAGAAATAATCAGTTTAC+TGG | - | chr5.3:1606299-1606318 | MS.gene024853:intron | 30.0% | |
| GATGCTAAAATTGAGTTTGA+AGG | - | chr5.3:1604503-1604522 | MS.gene024853:CDS | 30.0% | |
| GCAAAATTGTATTGAAGAGT+TGG | - | chr5.3:1604919-1604938 | MS.gene024853:CDS | 30.0% | |
| GCAATTTCCAAACTTGAATA+TGG | + | chr5.3:1606786-1606805 | None:intergenic | 30.0% | |
| GCATGAAACTCATCAAATAA+AGG | - | chr5.3:1604070-1604089 | MS.gene024853:CDS | 30.0% | |
| GTCATTAAAAAAGCAGCAAA+TGG | - | chr5.3:1603968-1603987 | MS.gene024853:CDS | 30.0% | |
| TAACAGAGAAAATTCCATAC+AGG | + | chr5.3:1604294-1604313 | None:intergenic | 30.0% | |
| TAGAATGTAATATGCTGAGT+TGG | + | chr5.3:1602827-1602846 | None:intergenic | 30.0% | |
| TATACAAATCTGGTGAAACT+TGG | + | chr5.3:1601657-1601676 | None:intergenic | 30.0% | |
| TCTAAATTACTCCTCAGAAT+TGG | - | chr5.3:1607091-1607110 | MS.gene024853:intron | 30.0% | |
| TCTTGAAAAGATTCCAATGT+TGG | - | chr5.3:1603332-1603351 | MS.gene024853:CDS | 30.0% | |
| TGAAAAACATTGTGGTATGT+TGG | - | chr5.3:1603605-1603624 | MS.gene024853:CDS | 30.0% | |
| TGAAAAGAAGGTTACAAAGT+TGG | - | chr5.3:1604655-1604674 | MS.gene024853:CDS | 30.0% | |
| TGTGAAAGATACTATCAGTA+AGG | - | chr5.3:1602521-1602540 | MS.gene024853:CDS | 30.0% | |
| TTCATTGAAACATTCTTTGG+AGG | - | chr5.3:1601962-1601981 | MS.gene024853:CDS | 30.0% | |
| TTGAATTCTTTGGACTATTG+TGG | + | chr5.3:1601244-1601263 | None:intergenic | 30.0% | |
| TTGGACTAAAAGAAATTCTG+TGG | - | chr5.3:1606422-1606441 | MS.gene024853:intron | 30.0% | |
| TTTAGCTATTACATATCTGG+TGG | - | chr5.3:1602372-1602391 | MS.gene024853:CDS | 30.0% | |
| TTTGGAGAAGTTATCCAAAA+TGG | - | chr5.3:1603035-1603054 | MS.gene024853:CDS | 30.0% | |
| ! | AATGGAAATCTCTAAGTTGA+AGG | - | chr5.3:1603986-1604005 | MS.gene024853:CDS | 30.0% |
| ! | AATTTCTTTTAGTCCAAAGG+CGG | + | chr5.3:1606419-1606438 | None:intergenic | 30.0% |
| ! | ACTTTGTAACCTTCTTTTCA+AGG | + | chr5.3:1604655-1604674 | None:intergenic | 30.0% |
| ! | ATTGTCAACTTTTGGATATG+TGG | + | chr5.3:1606808-1606827 | None:intergenic | 30.0% |
| ! | ATTTTTCTTCTTGGAGAACT+TGG | + | chr5.3:1604376-1604395 | None:intergenic | 30.0% |
| ! | CAGAATTTCTTTTAGTCCAA+AGG | + | chr5.3:1606422-1606441 | None:intergenic | 30.0% |
| ! | CATCGTTTCTTCTTTAAAAG+AGG | - | chr5.3:1606368-1606387 | MS.gene024853:intron | 30.0% |
| ! | CCATTTTAGATATTTTCTCC+AGG | + | chr5.3:1603503-1603522 | None:intergenic | 30.0% |
| ! | GAGATTTCTGAAAAACATTG+TGG | - | chr5.3:1603597-1603616 | MS.gene024853:CDS | 30.0% |
| ! | GTTAAGATCTGTTTCCATTT+TGG | + | chr5.3:1603052-1603071 | None:intergenic | 30.0% |
| ! | TGAAAGTATGCAGAAGATAT+TGG | - | chr5.3:1604448-1604467 | MS.gene024853:CDS | 30.0% |
| ! | TGATTTGGCAAAGAGAAAAA+GGG | + | chr5.3:1606517-1606536 | None:intergenic | 30.0% |
| ! | TGTATGGAATTTTCTCTGTT+AGG | - | chr5.3:1604293-1604312 | MS.gene024853:CDS | 30.0% |
| ! | TTTTTGATCGATGAATTGGT+CGG | + | chr5.3:1602906-1602925 | None:intergenic | 30.0% |
| !! | AAGTTCTTGCTTTAGGTTTT+TGG | + | chr5.3:1603262-1603281 | None:intergenic | 30.0% |
| !! | AGAAGCCATTTTGAATTCTT+TGG | + | chr5.3:1601254-1601273 | None:intergenic | 30.0% |
| !! | CAAGAATGGATTTTTCTTCT+TGG | + | chr5.3:1604385-1604404 | None:intergenic | 30.0% |
| !! | CTCTTTTAAAGAAGAAACGA+TGG | + | chr5.3:1606370-1606389 | None:intergenic | 30.0% |
| !! | TTGCTTTGGAGCTTAAATAT+GGG | - | chr5.3:1603835-1603854 | MS.gene024853:CDS | 30.0% |
| !! | TTTGTTGTTGTAATTTCCCT+AGG | - | chr5.3:1602294-1602313 | MS.gene024853:intron | 30.0% |
| !!! | GCAAGTTTTATTTCATTAGG+TGG | + | chr5.3:1602264-1602283 | None:intergenic | 30.0% |
| !!! | GTTTTTTTCTCCATGAATTG+CGG | + | chr5.3:1606872-1606891 | None:intergenic | 30.0% |
| !!! | TATTTTGGTAGGTTTTGTTG+TGG | + | chr5.3:1601486-1601505 | None:intergenic | 30.0% |
| AAACCGAAATCTTCAGTTAG+AGG | - | chr5.3:1603635-1603654 | MS.gene024853:CDS | 35.0% | |
| AACCACTTTAGTCGTTCATA+TGG | - | chr5.3:1601902-1601921 | MS.gene024853:CDS | 35.0% | |
| AAGGCACAAAATAATGCTAG+AGG | - | chr5.3:1603072-1603091 | MS.gene024853:CDS | 35.0% | |
| AAGTGAAATTGGAGAACTGA+AGG | - | chr5.3:1606323-1606342 | MS.gene024853:intron | 35.0% | |
| AATAGGAAAGTTGCAGTTTG+AGG | - | chr5.3:1607448-1607467 | MS.gene024853:intron | 35.0% | |
| AATGACCTTAACCAAGAACT+TGG | - | chr5.3:1605745-1605764 | MS.gene024853:CDS | 35.0% | |
| AATGATCAAGCTCATTGAAG+AGG | - | chr5.3:1602636-1602655 | MS.gene024853:CDS | 35.0% | |
| ACAAAGAAGAAAAGCAAGCA+AGG | - | chr5.3:1607275-1607294 | MS.gene024853:intron | 35.0% | |
| ACTATTGTGCTTGAAGAATC+TGG | - | chr5.3:1601324-1601343 | MS.gene024853:CDS | 35.0% | |
| AGAAAACTGAAGATGACAAG+AGG | - | chr5.3:1607168-1607187 | MS.gene024853:intron | 35.0% | |
| AGAATTTGACACCATAATGG+AGG | - | chr5.3:1601582-1601601 | MS.gene024853:CDS | 35.0% | |
| AGCTCTCATAAACCAAATTG+AGG | + | chr5.3:1605657-1605676 | None:intergenic | 35.0% | |
| AGTCGTTCATATGGACATAT+TGG | - | chr5.3:1601911-1601930 | MS.gene024853:CDS | 35.0% | |
| AGTGAAATTGGAGAACTGAA+GGG | - | chr5.3:1606324-1606343 | MS.gene024853:intron | 35.0% | |
| ATCTGTCAGAGTTAGAGTAT+GGG | + | chr5.3:1602424-1602443 | None:intergenic | 35.0% | |
| ATGGATATCCATAAAGTGTG+TGG | - | chr5.3:1605091-1605110 | MS.gene024853:CDS | 35.0% | |
| ATGGTGAAGTTCAAACCTTA+AGG | - | chr5.3:1602953-1602972 | MS.gene024853:CDS | 35.0% | |
| ATGTATTTGACCGCAATTCA+TGG | - | chr5.3:1606859-1606878 | MS.gene024853:intron | 35.0% | |
| ATTGGACAAAATTGAGAGCT+TGG | - | chr5.3:1605186-1605205 | MS.gene024853:CDS | 35.0% | |
| ATTGGACATAGAGAAGGAAT+TGG | - | chr5.3:1607109-1607128 | MS.gene024853:intron | 35.0% | |
| ATTGGAGAATAATACCTTGC+TGG | - | chr5.3:1604466-1604485 | MS.gene024853:CDS | 35.0% | |
| CAGACAGATTCTTGAACAAT+CGG | - | chr5.3:1605966-1605985 | MS.gene024853:CDS | 35.0% | |
| CTAAATGATGATTCACCATG+CGG | - | chr5.3:1602844-1602863 | MS.gene024853:CDS | 35.0% | |
| CTGAGGAAAACAACAACAAA+GGG | - | chr5.3:1607504-1607523 | MS.gene024853:intron | 35.0% | |
| CTGAGGATTGAAGTAGTAAA+TGG | - | chr5.3:1605415-1605434 | MS.gene024853:CDS | 35.0% | |
| CTTGAACAACTACAGAGTTT+AGG | - | chr5.3:1604131-1604150 | MS.gene024853:CDS | 35.0% | |
| GAACAAAATAAACCTTGCTG+AGG | - | chr5.3:1603356-1603375 | MS.gene024853:CDS | 35.0% | |
| GACAGTACACTAATCTATGA+GGG | + | chr5.3:1601808-1601827 | None:intergenic | 35.0% | |
| GATTGAAGTAGTAAATGGAC+TGG | - | chr5.3:1605420-1605439 | MS.gene024853:CDS | 35.0% | |
| GCTAAAAGAAGACTGCAAAA+AGG | - | chr5.3:1604211-1604230 | MS.gene024853:CDS | 35.0% | |
| GGAAGAAAAATATGCTGATG+TGG | - | chr5.3:1604676-1604695 | MS.gene024853:CDS | 35.0% | |
| GGTTAAGGTCATTGTTCAAA+TGG | + | chr5.3:1605738-1605757 | None:intergenic | 35.0% | |
| GTTGTACTCTCAATCACAAA+AGG | - | chr5.3:1603800-1603819 | MS.gene024853:CDS | 35.0% | |
| TCAAATTGAAAGAACAGAGC+TGG | - | chr5.3:1603401-1603420 | MS.gene024853:CDS | 35.0% | |
| TCAAATTGAATCAGCTCTAC+AGG | - | chr5.3:1603767-1603786 | MS.gene024853:CDS | 35.0% | |
| TCATGAAGTTGAACAACACA+GGG | - | chr5.3:1606071-1606090 | MS.gene024853:CDS | 35.0% | |
| TCTAGAAACTATAGCTAGAC+TGG | - | chr5.3:1603203-1603222 | MS.gene024853:CDS | 35.0% | |
| TGAATGTGAAAAACTCGTTG+AGG | - | chr5.3:1604967-1604986 | MS.gene024853:CDS | 35.0% | |
| TGACAGTACACTAATCTATG+AGG | + | chr5.3:1601809-1601828 | None:intergenic | 35.0% | |
| TGAGGGAGAAAAACTTAAGT+CGG | - | chr5.3:1605297-1605316 | MS.gene024853:CDS | 35.0% | |
| TGATAAAGTAATTTCGGAGC+TGG | - | chr5.3:1605003-1605022 | MS.gene024853:CDS | 35.0% | |
| TGATTTCTCATCAGCAAGAA+TGG | + | chr5.3:1604399-1604418 | None:intergenic | 35.0% | |
| TGCAAATTGTGAAGCTGATT+TGG | + | chr5.3:1606532-1606551 | None:intergenic | 35.0% | |
| TGGAGAATTTGACACCATAA+TGG | - | chr5.3:1601579-1601598 | MS.gene024853:CDS | 35.0% | |
| TGGTGAAGTTCAAACCTTAA+GGG | - | chr5.3:1602954-1602973 | MS.gene024853:CDS | 35.0% | |
| TTCATGAAGTTGAACAACAC+AGG | - | chr5.3:1606070-1606089 | MS.gene024853:CDS | 35.0% | |
| TTCTCTAGTGAAAAGTCAAG+AGG | - | chr5.3:1605213-1605232 | MS.gene024853:CDS | 35.0% | |
| TTGGACATAGAGAAGGAATT+GGG | - | chr5.3:1607110-1607129 | MS.gene024853:intron | 35.0% | |
| TTGTCCAATATACGCGATAT+TGG | + | chr5.3:1605175-1605194 | None:intergenic | 35.0% | |
| TTTAGCACTGTTAGAAAGCA+AGG | - | chr5.3:1606203-1606222 | MS.gene024853:intron | 35.0% | |
| TTTGATGAGTTTCATGCTTG+AGG | + | chr5.3:1604067-1604086 | None:intergenic | 35.0% | |
| TTTGATGGAAAATGCCTGTA+TGG | - | chr5.3:1604277-1604296 | MS.gene024853:CDS | 35.0% | |
| ! | AAGAGAATCAGAAAGTGCAT+AGG | + | chr5.3:1601734-1601753 | None:intergenic | 35.0% |
| ! | AGAGTTTTCCAGACATATTG+AGG | - | chr5.3:1605894-1605913 | MS.gene024853:CDS | 35.0% |
| ! | AGTGTTCAGGAAGAATTTTG+AGG | - | chr5.3:1605768-1605787 | MS.gene024853:CDS | 35.0% |
| ! | ATCCTTATCAGACTGGATTT+TGG | + | chr5.3:1602989-1603008 | None:intergenic | 35.0% |
| ! | ATCGACTCCATATTCAAGTT+TGG | - | chr5.3:1606776-1606795 | MS.gene024853:intron | 35.0% |
| ! | ATTTCTTTTAGTCCAAAGGC+GGG | + | chr5.3:1606418-1606437 | None:intergenic | 35.0% |
| ! | CATTTTCTCTTGCACTTTGA+TGG | + | chr5.3:1606632-1606651 | None:intergenic | 35.0% |
| ! | GAAAGTGTGTTAATACCAGA+TGG | - | chr5.3:1606651-1606670 | MS.gene024853:intron | 35.0% |
| ! | GTTCTTCAGATTGATTCAGA+CGG | - | chr5.3:1605115-1605134 | MS.gene024853:CDS | 35.0% |
| ! | TAAGCTGTAGTCACTTTATG+TGG | + | chr5.3:1601517-1601536 | None:intergenic | 35.0% |
| ! | TCTGAATCCCAATTCTTTTG+CGG | - | chr5.3:1604154-1604173 | MS.gene024853:CDS | 35.0% |
| ! | TTTTGATCGATGAATTGGTC+GGG | + | chr5.3:1602905-1602924 | None:intergenic | 35.0% |
| !! | ACTCAATTTTAGCATCAGAG+AGG | + | chr5.3:1604499-1604518 | None:intergenic | 35.0% |
| !! | CTCAATTTTAGCATCAGAGA+GGG | + | chr5.3:1604498-1604517 | None:intergenic | 35.0% |
| !! | CTGATTTGGCAAAGAGAAAA+AGG | + | chr5.3:1606518-1606537 | None:intergenic | 35.0% |
| !! | CTTGCTTTGGAGCTTAAATA+TGG | - | chr5.3:1603834-1603853 | MS.gene024853:CDS | 35.0% |
| !!! | ATGCAGCACTTATTTTACTC+TGG | + | chr5.3:1601444-1601463 | None:intergenic | 35.0% |
| !!! | CAGCTTTTTTATCATGAAGC+AGG | + | chr5.3:1601374-1601393 | None:intergenic | 35.0% |
| !!! | TTGCTGCTTTTTTAATGACC+TGG | + | chr5.3:1603967-1603986 | None:intergenic | 35.0% |
| AAACTGAAGATGACAAGAGG+AGG | - | chr5.3:1607171-1607190 | MS.gene024853:intron | 40.0% | |
| AAAGCAAGAACTTACCAGAG+TGG | - | chr5.3:1603269-1603288 | MS.gene024853:CDS | 40.0% | |
| AACTTAACTTCTCTTCCACC+AGG | - | chr5.3:1603946-1603965 | MS.gene024853:CDS | 40.0% | |
| AAGCAGATTCATTTGCAAGG+AGG | - | chr5.3:1602659-1602678 | MS.gene024853:CDS | 40.0% | |
| AAGTTGAACAACACAGGGTT+AGG | - | chr5.3:1606076-1606095 | MS.gene024853:CDS | 40.0% | |
| AATGTACTATAAGAAGCGGC+CGG | - | chr5.3:1602687-1602706 | MS.gene024853:CDS | 40.0% | |
| ACACTCCAAGTTCTTGGTTA+AGG | + | chr5.3:1605753-1605772 | None:intergenic | 40.0% | |
| ACAGATGCCGCAAAAGAATT+GGG | + | chr5.3:1604164-1604183 | None:intergenic | 40.0% | |
| ACATATTGAGGAGCTGAAGA+TGG | - | chr5.3:1605906-1605925 | MS.gene024853:CDS | 40.0% | |
| AGAAATTCTGTGGTAGGCAA+TGG | - | chr5.3:1606432-1606451 | MS.gene024853:intron | 40.0% | |
| AGAAGGAAATTGCGTGTTTG+TGG | - | chr5.3:1607563-1607582 | MS.gene024853:CDS | 40.0% | |
| AGAGAGATACGATCATGCAA+TGG | - | chr5.3:1602759-1602778 | MS.gene024853:CDS | 40.0% | |
| AGAGATACGATCATGCAATG+GGG | - | chr5.3:1602761-1602780 | MS.gene024853:CDS | 40.0% | |
| AGCAGATTCATTTGCAAGGA+GGG | - | chr5.3:1602660-1602679 | MS.gene024853:CDS | 40.0% | |
| AGCTGGAAGTTGAAACATTG+AGG | - | chr5.3:1603418-1603437 | MS.gene024853:CDS | 40.0% | |
| AGGAAGCAGATTCATTTGCA+AGG | - | chr5.3:1602656-1602675 | MS.gene024853:CDS | 40.0% | |
| AGGCTGAAAATTTAGTGCAG+AGG | - | chr5.3:1603655-1603674 | MS.gene024853:CDS | 40.0% | |
| AGTCCAGACGCTTATATTCT+TGG | - | chr5.3:1601207-1601226 | MS.gene024853:CDS | 40.0% | |
| AGTTGAACAACACAGGGTTA+GGG | - | chr5.3:1606077-1606096 | MS.gene024853:CDS | 40.0% | |
| ATAACTTCTCCAAACTCTCC+TGG | + | chr5.3:1603029-1603048 | None:intergenic | 40.0% | |
| ATCTGAATGAGTCAACTGAG+AGG | - | chr5.3:1605812-1605831 | MS.gene024853:CDS | 40.0% | |
| ATGAGAGTGATTCAGCATCA+GGG | + | chr5.3:1602879-1602898 | None:intergenic | 40.0% | |
| ATGCTCTCGCTTCAAATACT+TGG | + | chr5.3:1606955-1606974 | None:intergenic | 40.0% | |
| ATTGCGTGTTTGTGGATGTT+CGG | - | chr5.3:1607571-1607590 | MS.gene024853:CDS | 40.0% | |
| CAGCCTCTAACTGAAGATTT+CGG | + | chr5.3:1603641-1603660 | None:intergenic | 40.0% | |
| CAGTTGACATTGCATCTTTG+AGG | + | chr5.3:1605585-1605604 | None:intergenic | 40.0% | |
| CATATTGCTGAAATTGGCTG+AGG | - | chr5.3:1607487-1607506 | MS.gene024853:intron | 40.0% | |
| CATCTGTCAGAGTTAGAGTA+TGG | + | chr5.3:1602425-1602444 | None:intergenic | 40.0% | |
| CCTATTTGTTCAGAACCTCT+TGG | + | chr5.3:1607434-1607453 | None:intergenic | 40.0% | |
| CTAAAAGCAGATAAGGATGC+CGG | - | chr5.3:1603159-1603178 | MS.gene024853:CDS | 40.0% | |
| CTCAGAATTGGACATAGAGA+AGG | - | chr5.3:1607103-1607122 | MS.gene024853:intron | 40.0% | |
| CTCTGGTAAGTTCTTGCTTT+AGG | + | chr5.3:1603269-1603288 | None:intergenic | 40.0% | |
| CTTCTCTATGTCCAATTCTG+AGG | + | chr5.3:1607105-1607124 | None:intergenic | 40.0% | |
| CTTGGAATCTCCCTATCTAA+AGG | + | chr5.3:1607416-1607435 | None:intergenic | 40.0% | |
| GAAGAACACCACACACTTTA+TGG | + | chr5.3:1605102-1605121 | None:intergenic | 40.0% | |
| GAATCTCACTTTAGGTGTTC+TGG | - | chr5.3:1602201-1602220 | MS.gene024853:intron | 40.0% | |
| GAATTTCAGCTTCACTTGCT+CGG | + | chr5.3:1603107-1603126 | None:intergenic | 40.0% | |
| GAGACTCGATGATGAAAGTT+CGG | - | chr5.3:1606251-1606270 | MS.gene024853:intron | 40.0% | |
| GAGAGATACGATCATGCAAT+GGG | - | chr5.3:1602760-1602779 | MS.gene024853:CDS | 40.0% | |
| GATCGAATAAATCCATGGCT+TGG | + | chr5.3:1602087-1602106 | None:intergenic | 40.0% | |
| GATGCAGCTAAAAGCAGATA+AGG | - | chr5.3:1603152-1603171 | MS.gene024853:CDS | 40.0% | |
| GCTGAGGAAAACAACAACAA+AGG | - | chr5.3:1607503-1607522 | MS.gene024853:intron | 40.0% | |
| GGACTGAATGATGAGTTAGA+TGG | - | chr5.3:1604314-1604333 | MS.gene024853:CDS | 40.0% | |
| GGAGCAAAGAAATCTTGCTT+TGG | - | chr5.3:1603821-1603840 | MS.gene024853:CDS | 40.0% | |
| GGAGTCAATGTTATCTCAGA+AGG | - | chr5.3:1603224-1603243 | MS.gene024853:CDS | 40.0% | |
| GTCCATATGAACGACTAAAG+TGG | + | chr5.3:1601907-1601926 | None:intergenic | 40.0% | |
| TAAGTCGGAGAAAAAGATCG+TGG | - | chr5.3:1605312-1605331 | MS.gene024853:CDS | 40.0% | |
| TACAGATGCCGCAAAAGAAT+TGG | + | chr5.3:1604165-1604184 | None:intergenic | 40.0% | |
| TAGTGATTGAGACCTGTCTT+CGG | - | chr5.3:1606598-1606617 | MS.gene024853:intron | 40.0% | |
| TCCACTAACTTCATGAGTTC+CGG | + | chr5.3:1602709-1602728 | None:intergenic | 40.0% | |
| TCTGTCAGAGTTAGAGTATG+GGG | + | chr5.3:1602423-1602442 | None:intergenic | 40.0% | |
| TGAAAGTTCGGCAAAAAGCT+TGG | - | chr5.3:1606263-1606282 | MS.gene024853:intron | 40.0% | |
| TGAGAAAGAGGCAGAAAAAC+TGG | - | chr5.3:1603575-1603594 | MS.gene024853:CDS | 40.0% | |
| TGGACTAAACTATAGAGGCA+TGG | + | chr5.3:1602567-1602586 | None:intergenic | 40.0% | |
| TTAGATAGGGAGATTCCAAG+AGG | - | chr5.3:1607416-1607435 | MS.gene024853:intron | 40.0% | |
| TTATTTCGAAGACCAAGCCA+TGG | - | chr5.3:1602072-1602091 | MS.gene024853:CDS | 40.0% | |
| TTCCAGAATCATCTGAACGA+TGG | + | chr5.3:1607067-1607086 | None:intergenic | 40.0% | |
| ! | ACACTAATCTATGAGGGCAT+TGG | + | chr5.3:1601802-1601821 | None:intergenic | 40.0% |
| ! | ACGCTTATATTCTTGGTGGT+GGG | - | chr5.3:1601214-1601233 | MS.gene024853:CDS | 40.0% |
| ! | AGAGCACTTTGTGAACATCT+TGG | - | chr5.3:1605703-1605722 | MS.gene024853:CDS | 40.0% |
| ! | AGCAAATCTGAAACTCCATC+TGG | + | chr5.3:1606669-1606688 | None:intergenic | 40.0% |
| ! | ATATTTTCTCCAGGCAGTGA+TGG | + | chr5.3:1603494-1603513 | None:intergenic | 40.0% |
| ! | ATTTGAAGCGAGAGCATAGA+AGG | - | chr5.3:1606958-1606977 | MS.gene024853:intron | 40.0% |
| ! | ATTTGCTGACATTGCAGACA+AGG | - | chr5.3:1606682-1606701 | MS.gene024853:intron | 40.0% |
| ! | CATTCTTTGGAGGTCAACTA+TGG | - | chr5.3:1601972-1601991 | MS.gene024853:CDS | 40.0% |
| ! | GTTCAAACTTTGGGAGAATG+AGG | - | chr5.3:1606140-1606159 | MS.gene024853:CDS | 40.0% |
| ! | TGAATATGGAGTCGATTCTG+TGG | + | chr5.3:1606772-1606791 | None:intergenic | 40.0% |
| ! | TGGCTTCTGGAAAATCTTAC+AGG | - | chr5.3:1601266-1601285 | MS.gene024853:CDS | 40.0% |
| ! | TTCAGATTGATTCAGACGGA+GGG | - | chr5.3:1605119-1605138 | MS.gene024853:CDS | 40.0% |
| ! | TTGAACTTCTAGAGGAGAAC+AGG | - | chr5.3:1605389-1605408 | MS.gene024853:CDS | 40.0% |
| !! | ACAACAAGCTTTAGGATCCT+AGG | + | chr5.3:1602314-1602333 | None:intergenic | 40.0% |
| !! | AGCTCTAAGCAACCTCAATT+TGG | - | chr5.3:1605642-1605661 | MS.gene024853:CDS | 40.0% |
| !! | CAACAAGCTTTAGGATCCTA+GGG | + | chr5.3:1602313-1602332 | None:intergenic | 40.0% |
| !! | CCAAGAGGTTCTGAACAAAT+AGG | - | chr5.3:1607431-1607450 | MS.gene024853:intron | 40.0% |
| !! | CTGGCATTGTTTTATGTGCA+TGG | + | chr5.3:1602795-1602814 | None:intergenic | 40.0% |
| !! | GATGAGTTAGATGGATTGAG+AGG | - | chr5.3:1604323-1604342 | MS.gene024853:CDS | 40.0% |
| !!! | CTGCTTTTTTAATGACCTGG+TGG | + | chr5.3:1603964-1603983 | None:intergenic | 40.0% |
| AACGATGGCAGATCATAGCA+TGG | + | chr5.3:1607052-1607071 | None:intergenic | 45.0% | |
| ACGAAGCTTCGCCTTTAGAT+AGG | - | chr5.3:1607402-1607421 | MS.gene024853:intron | 45.0% | |
| ACGTACTACAGGAAGAACAG+CGG | - | chr5.3:1604828-1604847 | MS.gene024853:CDS | 45.0% | |
| ACTGCAAACTCTGATGCATG+GGG | - | chr5.3:1603728-1603747 | MS.gene024853:CDS | 45.0% | |
| ACTTCAGCAGCATCAATCTG+AGG | - | chr5.3:1605279-1605298 | MS.gene024853:CDS | 45.0% | |
| AGACTGCAAACTCTGATGCA+TGG | - | chr5.3:1603726-1603745 | MS.gene024853:CDS | 45.0% | |
| AGATGACAAGAGGAGGATCT+TGG | - | chr5.3:1607178-1607197 | MS.gene024853:intron | 45.0% | |
| AGCAAGGTTACTGAGCTTAC+TGG | - | chr5.3:1606219-1606238 | MS.gene024853:intron | 45.0% | |
| AGCTGCTGGAAATGGAGAAA+AGG | - | chr5.3:1605845-1605864 | MS.gene024853:CDS | 45.0% | |
| AGGTCTCAATCACTACATCC+TGG | + | chr5.3:1606593-1606612 | None:intergenic | 45.0% | |
| ATAAGGATGCCGGTGAAGTT+CGG | - | chr5.3:1603169-1603188 | MS.gene024853:CDS | 45.0% | |
| ATATGGGCTTCGTCTGTTGA+AGG | - | chr5.3:1603851-1603870 | MS.gene024853:CDS | 45.0% | |
| ATCATAGCATGGTCCACTGT+TGG | + | chr5.3:1607041-1607060 | None:intergenic | 45.0% | |
| ATCCTTCTGAACTACCACTC+TGG | + | chr5.3:1603286-1603305 | None:intergenic | 45.0% | |
| ATGGCTATGTTTCCGAAGAC+AGG | + | chr5.3:1606613-1606632 | None:intergenic | 45.0% | |
| CATTCCACTTGATCGCAATG+TGG | - | chr5.3:1606917-1606936 | MS.gene024853:intron | 45.0% | |
| CCACCAAGAATATAAGCGTC+TGG | + | chr5.3:1601213-1601232 | None:intergenic | 45.0% | |
| CCAGACGCTTATATTCTTGG+TGG | - | chr5.3:1601210-1601229 | MS.gene024853:CDS | 45.0% | |
| CGAAGCTTCGCCTTTAGATA+GGG | - | chr5.3:1607403-1607422 | MS.gene024853:intron | 45.0% | |
| CTGATTGTACCGAACTTCAC+CGG | + | chr5.3:1603181-1603200 | None:intergenic | 45.0% | |
| CTTCAGCAGCATCAATCTGA+GGG | - | chr5.3:1605280-1605299 | MS.gene024853:CDS | 45.0% | |
| CTTCAGCTCCTCAATATGTC+TGG | + | chr5.3:1605905-1605924 | None:intergenic | 45.0% | |
| GAACAGTGCAATGTTCCATG+AGG | - | chr5.3:1605615-1605634 | MS.gene024853:CDS | 45.0% | |
| GAATCTAGTCCACGTACTAC+AGG | - | chr5.3:1604817-1604836 | MS.gene024853:CDS | 45.0% | |
| GAATGAGTCAACTGAGAGGA+TGG | - | chr5.3:1605816-1605835 | MS.gene024853:CDS | 45.0% | |
| GACGCTTATATTCTTGGTGG+TGG | - | chr5.3:1601213-1601232 | MS.gene024853:CDS | 45.0% | |
| GACTGCAAACTCTGATGCAT+GGG | - | chr5.3:1603727-1603746 | MS.gene024853:CDS | 45.0% | |
| GAGATACGATCATGCAATGG+GGG | - | chr5.3:1602762-1602781 | MS.gene024853:CDS | 45.0% | |
| GATGAGAGTGATTCAGCATC+AGG | + | chr5.3:1602880-1602899 | None:intergenic | 45.0% | |
| GATTCACCATGCGGTTCTTT+AGG | - | chr5.3:1602853-1602872 | MS.gene024853:CDS | 45.0% | |
| GGAACTCATGAAGTTAGTGG+AGG | - | chr5.3:1602708-1602727 | MS.gene024853:CDS | 45.0% | |
| GGAAGAGATGCAAGAGATTG+TGG | - | chr5.3:1603902-1603921 | MS.gene024853:CDS | 45.0% | |
| GGATGTATGGACCTCCATTA+TGG | + | chr5.3:1601596-1601615 | None:intergenic | 45.0% | |
| GGCCAAAATCCAGTCTGATA+AGG | - | chr5.3:1602984-1603003 | MS.gene024853:CDS | 45.0% | |
| GTAGAGAACTCTGTCCTCAT+AGG | - | chr5.3:1605253-1605272 | MS.gene024853:CDS | 45.0% | |
| TAAGGTAGCTTCGGCTAGAA+TGG | - | chr5.3:1601559-1601578 | MS.gene024853:CDS | 45.0% | |
| TACCAGAGTGGTAGTTCAGA+AGG | - | chr5.3:1603281-1603300 | MS.gene024853:CDS | 45.0% | |
| TCATCCACATTGCGATCAAG+TGG | + | chr5.3:1606924-1606943 | None:intergenic | 45.0% | |
| TCCTGAACACTCCAAGTTCT+TGG | + | chr5.3:1605759-1605778 | None:intergenic | 45.0% | |
| TCTGGACTCAGATTCTGACA+AGG | + | chr5.3:1601195-1601214 | None:intergenic | 45.0% | |
| TCTTCAGTACCAGGAGAGTT+TGG | - | chr5.3:1603017-1603036 | MS.gene024853:CDS | 45.0% | |
| TGCCATCGTTCAGATGATTC+TGG | - | chr5.3:1607062-1607081 | MS.gene024853:intron | 45.0% | |
| TGCTCTCTTTCTTCAGTACC+AGG | - | chr5.3:1603008-1603027 | MS.gene024853:CDS | 45.0% | |
| TGCTTAGAGCTAGTACCTCA+TGG | + | chr5.3:1605633-1605652 | None:intergenic | 45.0% | |
| TGGATTGAGAGGAACAGTGA+AGG | - | chr5.3:1604334-1604353 | MS.gene024853:CDS | 45.0% | |
| TTGCGTGTTTGTGGATGTTC+GGG | - | chr5.3:1607572-1607591 | MS.gene024853:CDS | 45.0% | |
| ! | ACCAAGAACTTGGAGTGTTC+AGG | - | chr5.3:1605755-1605774 | MS.gene024853:CDS | 45.0% |
| ! | CAAAAAGGAGCACAGTGAGA+AGG | - | chr5.3:1604226-1604245 | MS.gene024853:CDS | 45.0% |
| ! | CTTCAGATTGATTCAGACGG+AGG | - | chr5.3:1605118-1605137 | MS.gene024853:CDS | 45.0% |
| !! | AGAGAGCATCCTTATCAGAC+TGG | + | chr5.3:1602996-1603015 | None:intergenic | 45.0% |
| !! | ATCAGACTGGATTTTGGCCA+GGG | + | chr5.3:1602983-1603002 | None:intergenic | 45.0% |
| !! | TATCAGACTGGATTTTGGCC+AGG | + | chr5.3:1602984-1603003 | None:intergenic | 45.0% |
| !! | AAATTTACTAAATTATATTA+GGG | + | chr5.3:1602460-1602479 | None:intergenic | 5.0% |
| ACAAGAGGAGGATCTTGGAG+AGG | - | chr5.3:1607183-1607202 | MS.gene024853:intron | 50.0% | |
| ACCATTATCTGCGCCAACAG+TGG | - | chr5.3:1607025-1607044 | MS.gene024853:intron | 50.0% | |
| ACCTTGCTGAGGAGAATTCC+AGG | - | chr5.3:1603367-1603386 | MS.gene024853:CDS | 50.0% | |
| ACTACAGGAAGAACAGCGGT+TGG | - | chr5.3:1604832-1604851 | MS.gene024853:CDS | 50.0% | |
| AGCTAACTTCTGACCATCCG+AGG | + | chr5.3:1607213-1607232 | None:intergenic | 50.0% | |
| CGTATCTCTCTGCTAACGCA+CGG | + | chr5.3:1602750-1602769 | None:intergenic | 50.0% | |
| CTACAGGAAGAACAGCGGTT+GGG | - | chr5.3:1604833-1604852 | MS.gene024853:CDS | 50.0% | |
| CTTCACTTGCTCGGTCATCA+AGG | + | chr5.3:1603098-1603117 | None:intergenic | 50.0% | |
| GATCTTGGAGAGGCTTTCCT+CGG | - | chr5.3:1607193-1607212 | MS.gene024853:intron | 50.0% | |
| GCCGGAACTCATGAAGTTAG+TGG | - | chr5.3:1602705-1602724 | MS.gene024853:CDS | 50.0% | |
| GCTGCTGAAGTGAACCTATG+AGG | + | chr5.3:1605270-1605289 | None:intergenic | 50.0% | |
| GCTGGAAATGGAGAAAAGGC+TGG | - | chr5.3:1605849-1605868 | MS.gene024853:CDS | 50.0% | |
| GCTGTTCTTCCTGTAGTACG+TGG | + | chr5.3:1604829-1604848 | None:intergenic | 50.0% | |
| GCTTCGTCTGTTGAAGGACT+TGG | - | chr5.3:1603857-1603876 | MS.gene024853:CDS | 50.0% | |
| GGAAATGGAGAAAAGGCTGG+AGG | - | chr5.3:1605852-1605871 | MS.gene024853:CDS | 50.0% | |
| GGACAAAGAGCTGCTGGAAA+TGG | - | chr5.3:1605837-1605856 | MS.gene024853:CDS | 50.0% | |
| TACAGGAAGAACAGCGGTTG+GGG | - | chr5.3:1604834-1604853 | MS.gene024853:CDS | 50.0% | |
| TAGAGCACATTTCCCGCCTT+TGG | - | chr5.3:1606403-1606422 | MS.gene024853:intron | 50.0% | |
| TAGAGGAGAACAGGCAACTG+AGG | - | chr5.3:1605398-1605417 | MS.gene024853:CDS | 50.0% | |
| TCAAACCTTAAGGGAAGCCC+TGG | - | chr5.3:1602963-1602982 | MS.gene024853:CDS | 50.0% | |
| TCCACTGTTGGCGCAGATAA+TGG | + | chr5.3:1607029-1607048 | None:intergenic | 50.0% | |
| TCCTGGAATTCTCCTCAGCA+AGG | + | chr5.3:1603371-1603390 | None:intergenic | 50.0% | |
| TCTCCAGGCAGTGATGGTAA+AGG | + | chr5.3:1603488-1603507 | None:intergenic | 50.0% | |
| TGAAGCGCGACTGGCAAATT+TGG | - | chr5.3:1604793-1604812 | MS.gene024853:CDS | 50.0% | |
| TGCGTGTTTGTGGATGTTCG+GGG | - | chr5.3:1607573-1607592 | MS.gene024853:CDS | 50.0% | |
| TGGAGGTCAACTATGGTGAG+TGG | - | chr5.3:1601979-1601998 | MS.gene024853:CDS | 50.0% | |
| TGTCCTTTACCATCACTGCC+TGG | - | chr5.3:1603482-1603501 | MS.gene024853:CDS | 50.0% | |
| TTCGGGGCCATCAACTAATG+AGG | - | chr5.3:1607589-1607608 | MS.gene024853:CDS | 50.0% | |
| ! | ACTTTGGGAGAATGAGGCTG+CGG | - | chr5.3:1606146-1606165 | MS.gene024853:CDS | 50.0% |
| ! | AGAGAGGGACTTTTCCAGCA+AGG | + | chr5.3:1604483-1604502 | None:intergenic | 50.0% |
| ! | GCTGAGTTGGGAAATGCTTC+TGG | + | chr5.3:1602814-1602833 | None:intergenic | 50.0% |
| ACACTCAAGTGAAGCGCGAC+TGG | - | chr5.3:1604784-1604803 | MS.gene024853:CDS | 55.0% | |
| CTGCTAACGCACGGTATGCT+CGG | + | chr5.3:1602741-1602760 | None:intergenic | 55.0% | |
| GAGGATGGACAAAGAGCTGC+TGG | - | chr5.3:1605831-1605850 | MS.gene024853:CDS | 55.0% | |
| GGTAGGCAATGGAGCGCAAA+AGG | - | chr5.3:1606443-1606462 | MS.gene024853:intron | 55.0% | |
| TCAGGGCCTAAAGAACCGCA+TGG | + | chr5.3:1602862-1602881 | None:intergenic | 55.0% | |
| TTGGAGAGGCTTTCCTCGGA+TGG | - | chr5.3:1607197-1607216 | MS.gene024853:intron | 55.0% | |
| TTTGGCCAGGGCTTCCCTTA+AGG | + | chr5.3:1602971-1602990 | None:intergenic | 55.0% | |
| ! | CAGGGTTAGGGAAGAAGCAC+TGG | - | chr5.3:1606089-1606108 | MS.gene024853:CDS | 55.0% |
| GGAAGAACAGCGGTTGGGGA+AGG | - | chr5.3:1604838-1604857 | MS.gene024853:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 1601185 | 1607616 | 1601185 | ID=MS.gene024853 |
| chr5.3 | mRNA | 1601185 | 1607616 | 1601185 | ID=MS.gene024853.t1;Parent=MS.gene024853 |
| chr5.3 | exon | 1607514 | 1607616 | 1607514 | ID=MS.gene024853.t1.exon1;Parent=MS.gene024853.t1 |
| chr5.3 | CDS | 1607514 | 1607616 | 1607514 | ID=cds.MS.gene024853.t1;Parent=MS.gene024853.t1 |
| chr5.3 | exon | 1602337 | 1606187 | 1602337 | ID=MS.gene024853.t1.exon2;Parent=MS.gene024853.t1 |
| chr5.3 | CDS | 1602337 | 1606187 | 1602337 | ID=cds.MS.gene024853.t1;Parent=MS.gene024853.t1 |
| chr5.3 | exon | 1601185 | 1602207 | 1601185 | ID=MS.gene024853.t1.exon3;Parent=MS.gene024853.t1 |
| chr5.3 | CDS | 1601185 | 1602207 | 1601185 | ID=cds.MS.gene024853.t1;Parent=MS.gene024853.t1 |
| Gene Sequence |
| Protein sequence |
