AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene50543

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene50543.t1 MTR_1g071540 95.490 1796 81 0 1 1796 1 1796 0.0 3419
MS.gene50543.t1 MTR_7g095410 66.315 1137 366 6 4 1135 2 1126 0.0 1410
MS.gene50543.t1 MTR_7g095410 66.315 1137 366 6 4 1135 2 1126 0.0 1410
MS.gene50543.t1 MTR_7g095410 65.911 1103 359 6 38 1135 1 1091 0.0 1341
MS.gene50543.t1 MTR_1g103160 40.190 1794 1004 18 4 1770 2 1753 0.0 1086
MS.gene50543.t1 MTR_1g103160 40.168 1790 1002 18 8 1770 3 1750 0.0 1083
MS.gene50543.t1 MTR_1g103160 39.261 1760 1000 18 38 1770 1 1718 0.0 1008
MS.gene50543.t1 MTR_5g006520 35.143 1824 989 23 4 1796 2 1662 0.0 865
MS.gene50543.t1 MTR_5g006520 35.132 1816 984 23 4 1788 2 1654 0.0 858
MS.gene50543.t1 MTR_5g075490 30.377 530 301 13 10 501 16 515 1.10e-40 161
MS.gene50543.t1 MTR_8g471130 50.427 117 52 1 15 131 10 120 6.71e-34 142
MS.gene50543.t1 MTR_5g066340 56.701 97 42 0 15 111 10 106 1.53e-32 138
MS.gene50543.t1 MTR_7g108070 54.945 91 38 2 16 103 10 100 7.71e-26 110
MS.gene50543.t1 MTR_3g100190 32.500 360 168 15 24 352 14 329 1.08e-25 116
MS.gene50543.t1 MTR_1g088965 52.174 92 43 1 1 91 1 92 4.58e-24 108
MS.gene50543.t1 MTR_3g467610 41.912 136 64 4 38 171 15 137 1.07e-20 98.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene50543.t1 AT1G03080 46.696 1801 868 18 8 1792 6 1730 0.0 1364
MS.gene50543.t1 AT1G03080 46.696 1801 868 18 8 1792 6 1730 0.0 1364
MS.gene50543.t1 AT1G03080 46.696 1801 868 18 8 1792 6 1730 0.0 1364
MS.gene50543.t1 AT3G22790 37.899 1818 1001 22 4 1790 2 1722 0.0 984
MS.gene50543.t1 AT3G22790 37.899 1818 1001 22 4 1790 2 1722 0.0 984
MS.gene50543.t1 AT3G22790 37.899 1818 1001 22 4 1790 2 1722 0.0 984
MS.gene50543.t1 AT4G14760 35.934 1820 1024 30 4 1794 2 1708 0.0 912
MS.gene50543.t1 AT4G14760 35.934 1820 1024 30 4 1794 2 1708 0.0 912
MS.gene50543.t1 AT4G14760 35.934 1820 1024 30 4 1794 2 1708 0.0 912
MS.gene50543.t1 AT4G14760 35.934 1820 1024 30 4 1794 2 1708 0.0 912
MS.gene50543.t1 AT4G02710 51.155 606 253 7 9 604 7 579 7.87e-176 563
MS.gene50543.t1 AT4G02710 29.739 844 407 29 1021 1792 379 1108 1.32e-54 210
MS.gene50543.t1 AT5G10500 44.118 170 76 5 15 172 10 172 1.61e-37 154
MS.gene50543.t1 AT2G22560 61.165 103 40 0 15 117 10 112 2.05e-37 154
MS.gene50543.t1 AT1G58215 35.521 259 135 5 15 273 10 236 5.00e-36 149
MS.gene50543.t1 AT2G30500 65.169 89 31 0 11 99 17 105 2.81e-35 143
MS.gene50543.t1 AT2G30500 65.169 89 31 0 11 99 17 105 2.81e-35 143
MS.gene50543.t1 AT2G30500 65.169 89 31 0 11 99 16 104 2.92e-35 143
MS.gene50543.t1 AT1G09720 32.676 355 178 11 15 362 10 310 6.35e-35 146
MS.gene50543.t1 AT5G58320 67.073 82 27 0 17 98 23 104 6.48e-32 133
MS.gene50543.t1 AT5G58320 67.073 82 27 0 17 98 23 104 6.48e-32 133
MS.gene50543.t1 AT5G58320 67.073 82 27 0 17 98 23 104 7.59e-32 133
MS.gene50543.t1 AT5G58320 67.073 82 27 0 17 98 23 104 7.59e-32 133
MS.gene50543.t1 AT1G03470 54.444 90 40 1 17 105 8 97 4.42e-25 107
MS.gene50543.t1 AT1G03470 54.444 90 40 1 17 105 8 97 4.42e-25 107
MS.gene50543.t1 AT1G03470 54.444 90 40 1 17 105 8 97 4.42e-25 107
MS.gene50543.t1 AT1G03470 54.444 90 40 1 17 105 8 97 4.42e-25 107
MS.gene50543.t1 AT2G47920 53.488 86 39 1 17 101 10 95 7.80e-25 105
MS.gene50543.t1 AT2G47920 53.488 86 39 1 17 101 10 95 7.80e-25 105
MS.gene50543.t1 AT5G58320 65.574 61 21 0 38 98 1 61 2.87e-19 93.6
MS.gene50543.t1 AT4G03153 37.179 78 44 2 17 89 7 84 4.12e-12 68.2

Find 334 sgRNAs with CRISPR-Local

Find 426 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCACCCTTCACGTACATTTC+TGG 0.115044 1.2:+54761461 MS.gene50543:CDS
TGACAAAATTATTTCTAAAT+TGG 0.144547 1.2:+54763843 MS.gene50543:CDS
CGTGAAGGGTGGCGTGTTTC+TGG 0.149213 1.2:-54761450 None:intergenic
CCGACTTTGATCGGCCATTT+TGG 0.177913 1.2:-54766504 None:intergenic
TTTGGCAAGGGCTTTCTTTA+AGG 0.184761 1.2:-54761760 None:intergenic
TCATTTCAGACTCCAATTTC+TGG 0.189196 1.2:-54764962 None:intergenic
TTTCAGTTGTGGCTTGTAAT+TGG 0.194109 1.2:-54763270 None:intergenic
GCTTAGTTTCTTCAAGTTCT+TGG 0.200127 1.2:-54764995 None:intergenic
AACAGAAAATGGGGAGTTTA+AGG 0.200914 1.2:+54765766 MS.gene50543:CDS
AAAGGAGATTGAACAGAAAA+TGG 0.204127 1.2:+54765755 MS.gene50543:CDS
TGAACAGAAGTGTCTTCTTT+TGG 0.240171 1.2:+54762436 MS.gene50543:CDS
CTCGGAAAATAACAACCTTT+TGG 0.259509 1.2:+54763306 MS.gene50543:CDS
AGCAAGTTGGAAGGTGAAAA+TGG 0.270031 1.2:+54765236 MS.gene50543:CDS
AAAGAAAGCCCTTGCCAAAT+TGG 0.283355 1.2:+54761764 MS.gene50543:CDS
AATGCAAATGTTGAAGAGTT+TGG 0.285530 1.2:-54762616 None:intergenic
AGACAACAAGAGTAGGGTTT+TGG 0.287245 1.2:+54766094 MS.gene50543:CDS
AGATGAGAAACTGGCTCTTT+TGG 0.288197 1.2:+54763069 MS.gene50543:CDS
AGTTGAGTGCCAGAGACTTT+TGG 0.300898 1.2:+54763804 MS.gene50543:CDS
AGCACTTCAATCTCAGTTAC+AGG 0.301238 1.2:-54765798 None:intergenic
ATCTCAGTTACAGGATTATC+TGG 0.302699 1.2:-54765789 None:intergenic
CTCTGCAATGCTCTTCCCTT+TGG 0.304252 1.2:-54763597 None:intergenic
GGAAACCATGGAGAAGCTTT+TGG 0.306581 1.2:+54763099 MS.gene50543:CDS
AAGGGAGTCGTCACTTAAAA+AGG 0.310090 1.2:+54763546 MS.gene50543:CDS
AATCACCAATACAATGAAAA+TGG 0.310983 1.2:+54765579 MS.gene50543:CDS
CGCTTCAAACTGCTCTTTAA+CGG 0.314327 1.2:-54766234 None:intergenic
TGATCAAGCATGATGTCTTT+TGG 0.316570 1.2:-54765822 None:intergenic
GACCAAGCTGTTTAAGTTCC+TGG 0.318841 1.2:-54764533 None:intergenic
ACAGTCTGAATTACAGTCTT+TGG 0.323979 1.2:+54762478 MS.gene50543:CDS
CCTCCTCGTATTCTTGTTCC+AGG 0.327122 1.2:-54763693 None:intergenic
ATTCTAGGAGAATGTATTCT+TGG 0.328024 1.2:+54760283 MS.gene50543:CDS
GCGCCCAGAGCTTATGAAAA+TGG 0.333667 1.2:+54761257 MS.gene50543:CDS
ATCAATTTGTAATTCCTTGT+TGG 0.333975 1.2:-54763647 None:intergenic
TCTCATTTCAACATTGGCTT+TGG 0.334784 1.2:-54765718 None:intergenic
TTTGTCCATACACACTTTGC+AGG 0.340231 1.2:+54762796 MS.gene50543:CDS
CTTGGAGACATTATCAAAAC+TGG 0.344415 1.2:+54762163 MS.gene50543:CDS
TGATCCTCCTCTGCAGGTCT+TGG 0.345492 1.2:-54765656 None:intergenic
GCAGAAGTGTATCCAAGATT+TGG 0.357411 1.2:+54763759 MS.gene50543:CDS
TGGCTCCAAGAAAATCTTAC+AGG 0.359859 1.2:+54760342 MS.gene50543:CDS
CGTTTGCGGGATTATCTCTA+TGG 0.360101 1.2:+54766533 MS.gene50543:CDS
CTCGGTCTCATGCAGATTCT+AGG 0.361762 1.2:+54760268 MS.gene50543:CDS
TGAATTGGAACTAATGCATT+TGG 0.362141 1.2:+54763510 MS.gene50543:CDS
TCCTTGGTGGAAAAGGAGTT+GGG 0.363324 1.2:+54766023 MS.gene50543:CDS
TAACGAGAAGCAGAAAGAAT+TGG 0.364874 1.2:+54762532 MS.gene50543:CDS
AAGTGAAGTGAACCAGAAAT+TGG 0.366159 1.2:+54764950 MS.gene50543:CDS
TTCAGTTGTGGCTTGTAATT+GGG 0.366690 1.2:-54763269 None:intergenic
TTCTTTCTCTGAAAAGATAC+TGG 0.370651 1.2:-54763425 None:intergenic
TCTGCAATGCTCTTCCCTTT+GGG 0.370955 1.2:-54763596 None:intergenic
AAAGAGCCACAACAACTTAC+AGG 0.374862 1.2:+54764344 MS.gene50543:CDS
TTTCTTCATCAAATCTTGTA+TGG 0.375447 1.2:-54766162 None:intergenic
CTAATGCATTTGGAACTAAA+AGG 0.378484 1.2:+54763520 MS.gene50543:CDS
CTGAGAAAATTAAAATACTA+AGG 0.379706 1.2:+54763908 MS.gene50543:CDS
CAAATTAGAAAGTGAAGAAA+TGG 0.382537 1.2:+54764620 MS.gene50543:CDS
GGCCTTACACATGCACAAAA+AGG 0.383586 1.2:-54766593 None:intergenic
TGAAAAGCAACACAGTGAAT+TGG 0.385151 1.2:+54763495 MS.gene50543:CDS
GCTTCAGTATCAGCAGAGTT+TGG 0.386532 1.2:+54761809 MS.gene50543:CDS
TAAGGCCGAAATTTCTGCTT+CGG 0.386910 1.2:-54761742 None:intergenic
AAGCAAAGAGAAAACCAAAA+TGG 0.387448 1.2:+54766490 MS.gene50543:CDS
AGAGCAGTTTGAAGCGTCTC+AGG 0.388830 1.2:+54766241 MS.gene50543:CDS
CTCAGCATTCAAGTCTGAAA+TGG 0.388959 1.2:-54763146 None:intergenic
ATCATCACAGGAATTTGATT+AGG 0.395077 1.2:-54761378 None:intergenic
GAATGATTGTGTTACATCTC+TGG 0.397164 1.2:+54765307 MS.gene50543:CDS
ACAGAAGATTGCGGCAGAAC+CGG 0.397763 1.2:+54765938 MS.gene50543:CDS
GTCTTGTTCAAAGCAGAATT+CGG 0.399021 1.2:-54761546 None:intergenic
AAGTCGGAGAGTACGTTTGC+GGG 0.402704 1.2:+54766520 MS.gene50543:CDS
CAGAAATCAATCACCCTTAG+TGG 0.404390 1.2:-54766618 None:intergenic
CTCATCCTGCAAAGTGTGTA+TGG 0.405131 1.2:-54762801 None:intergenic
AAAGGTATTGGAAAAGAATC+AGG 0.405822 1.2:+54764230 MS.gene50543:CDS
CACAATAAAGTGGAAATCCT+AGG 0.408167 1.2:+54762680 MS.gene50543:CDS
ATCAATTGACTTGTCAGATT+AGG 0.409144 1.2:+54764712 MS.gene50543:CDS
AATAGAGTTCCAAAAGGTAT+TGG 0.411187 1.2:+54764218 MS.gene50543:CDS
AAAAGCCGAAGCAGAAATTT+CGG 0.411401 1.2:+54761737 MS.gene50543:CDS
GATTTAGATCCACAGTGCTT+TGG 0.411729 1.2:+54762983 MS.gene50543:CDS
AGTCAGCGGCAAGAGCTCTA+AGG 0.412485 1.2:-54762655 None:intergenic
GTCAATGAAACACTGCTTCA+AGG 0.413357 1.2:+54765122 MS.gene50543:CDS
TGAAGATCTGAGTGAGGAGA+AGG 0.413615 1.2:+54764416 MS.gene50543:CDS
AATAAATGAGATTGAACAAT+GGG 0.414358 1.2:+54765055 MS.gene50543:CDS
TAAGTCCCAAGAACTCAAAA+TGG 0.415777 1.2:+54760322 MS.gene50543:CDS
AGGAGATTCCTTGGTGGAAA+AGG 0.418420 1.2:+54766016 MS.gene50543:CDS
CTTGGAGATAATTTCCAGTC+TGG 0.418588 1.2:+54762331 MS.gene50543:CDS
TGTCAGCAGGAGGAGAGTTT+CGG 0.420215 1.2:+54766373 MS.gene50543:CDS
AGCTGAAGTTCAAGACTTGA+AGG 0.422558 1.2:+54761914 MS.gene50543:CDS
AATCCGAGGAGAAAGTTAGA+AGG 0.427302 1.2:+54762201 MS.gene50543:CDS
ACAAGAATACGAGGAGGAAC+TGG 0.428312 1.2:+54763699 MS.gene50543:CDS
ACATTTGCATTCTCAATCTC+AGG 0.428623 1.2:+54762628 MS.gene50543:CDS
ATATCTGAATGTTCATCATA+TGG 0.430778 1.2:+54765846 MS.gene50543:CDS
ATGTTTGTTGTATGTTTCCT+TGG 0.431712 1.2:-54765988 None:intergenic
GGTCCTTGTCTGAGGACAAT+TGG 0.433769 1.2:-54764902 None:intergenic
CAGCAAAGAGTTCTGCAGCC+TGG 0.434765 1.2:-54765082 None:intergenic
CTTGGAGAAAATAACAGATC+TGG 0.436503 1.2:+54761995 MS.gene50543:CDS
GGAGGACAGATTGAAGATAA+TGG 0.437055 1.2:+54764593 MS.gene50543:CDS
AGCAAAGAGTTCTGCAGCCT+GGG 0.440991 1.2:-54765081 None:intergenic
TCATTCAAAGCACTGATAGC+TGG 0.441799 1.2:-54765290 None:intergenic
GACAATAGAGAAACTTGAAC+AGG 0.441947 1.2:+54762841 MS.gene50543:CDS
ATAGTACATTTCCGCTCTCC+TGG 0.442846 1.2:-54761229 None:intergenic
AATCTTGTATGGTTATTTGA+AGG 0.446085 1.2:-54766151 None:intergenic
CCCTCTTAGTACATCAAGTT+CGG 0.447589 1.2:-54763353 None:intergenic
AACGAGAAGCAGAAAGAATT+GGG 0.448624 1.2:+54762533 MS.gene50543:CDS
ACATACAACAAACATCCTTC+AGG 0.449082 1.2:+54765996 MS.gene50543:CDS
GAGGGTGCACTGTCTTCAGC+TGG 0.450914 1.2:+54766317 MS.gene50543:CDS
CCATATACATGGAAAACTTA+AGG 0.454021 1.2:+54764020 MS.gene50543:CDS
CGAGAACATGCAAAGTTTGA+AGG 0.456022 1.2:+54761603 MS.gene50543:CDS
ACTAAGGGTTGGGCTGCATC+AGG 0.456344 1.2:+54763924 MS.gene50543:CDS
TGTTCAATATAAACAATGCT+TGG 0.458659 1.2:+54762145 MS.gene50543:CDS
AGAAAGAATTGGGTAAACTT+TGG 0.459899 1.2:+54762543 MS.gene50543:CDS
TGGATGCCTCCAAAAGTCTC+TGG 0.460089 1.2:-54763813 None:intergenic
GGTGTTCAACTCTGAAACTA+AGG 0.460564 1.2:-54763449 None:intergenic
ACAGTCTTTGGCACACAAGA+TGG 0.460791 1.2:+54762490 MS.gene50543:CDS
AATCTCTCTCATTTCAACAT+TGG 0.461008 1.2:-54765724 None:intergenic
TGGAAGTCGAGGAGAGGATC+TGG 0.462169 1.2:-54765636 None:intergenic
TTCCTTGGTGGAAAAGGAGT+TGG 0.465144 1.2:+54766022 MS.gene50543:CDS
TCTTCAGTACCAGGAATGCT+TGG 0.465314 1.2:+54761977 MS.gene50543:CDS
AAGGGACATGTTGTGTCAAA+AGG 0.465459 1.2:+54764740 MS.gene50543:CDS
AGAAATTTACTGTCTTAAAG+AGG 0.466254 1.2:+54762904 MS.gene50543:CDS
TTCAGACTTGAATGCTGAGT+TGG 0.467174 1.2:+54763150 MS.gene50543:CDS
TTCATCCTCCAATTTGGCAA+GGG 0.468244 1.2:-54761772 None:intergenic
ACGTACTCTCCGACTTTGAT+CGG 0.469466 1.2:-54766513 None:intergenic
GAGAGATATGATCATGCAAC+TGG 0.470348 1.2:+54761315 MS.gene50543:CDS
AAGCAAAGGAGAAGAGAGAA+TGG 0.471002 1.2:+54764269 MS.gene50543:CDS
AAGGAGATTGAACAGAAAAT+GGG 0.472263 1.2:+54765756 MS.gene50543:CDS
TGAAGTTGAGTCTTTGAAGC+AGG 0.472271 1.2:+54762085 MS.gene50543:CDS
TGCCAAATTGGAGGATGAAA+AGG 0.472473 1.2:+54761776 MS.gene50543:CDS
CTCTTTAACGGTATCATACT+CGG 0.473317 1.2:-54766222 None:intergenic
TTTCATCCTCCAATTTGGCA+AGG 0.473728 1.2:-54761773 None:intergenic
TTTCATTGATCCTCCTCTGC+AGG 0.474372 1.2:-54765662 None:intergenic
TTTACCAATGGTTACTTCCA+TGG 0.474662 1.2:+54761410 MS.gene50543:CDS
ATTTCTCCACAAGCAGAGAC+TGG 0.475100 1.2:-54763213 None:intergenic
AGAACTCTTTGCTGAACTGC+AGG 0.476323 1.2:+54765091 MS.gene50543:CDS
ATGTGTAAGGCCACCCACTA+AGG 0.476331 1.2:+54766604 MS.gene50543:CDS
TCTCTGGAGATGCAGACTCT+TGG 0.476423 1.2:+54765323 MS.gene50543:CDS
ACAAGATTTGATGAAGAAAG+TGG 0.476941 1.2:+54766166 MS.gene50543:CDS
TGATCATATGCTTGAGTTGT+GGG 0.477759 1.2:+54765899 MS.gene50543:CDS
CAATGGAGGCCGTGGCACTA+AGG 0.478761 1.2:+54761683 MS.gene50543:CDS
GAAAGAATTAGTTAGCAAGT+TGG 0.480981 1.2:+54765223 MS.gene50543:CDS
AAATTAAAATACTAAGGGTT+GGG 0.482199 1.2:+54763914 MS.gene50543:CDS
CTTGTCAGATTAGGAATGAA+AGG 0.482780 1.2:+54764721 MS.gene50543:CDS
AAGCTATGATCGACGAGGTC+AGG 0.482794 1.2:+54762954 MS.gene50543:CDS
TCGCAATCTCTCCTCTTGTA+AGG 0.483536 1.2:-54762570 None:intergenic
TGAAATCGAAGCTTTGAAGT+TGG 0.483795 1.2:+54762253 MS.gene50543:CDS
AAAATTAAAATACTAAGGGT+TGG 0.484576 1.2:+54763913 MS.gene50543:CDS
TTTCTTCAAGTTCTTGGTGT+AGG 0.485996 1.2:-54764989 None:intergenic
TCATCAGAATCAGATGAGAT+TGG 0.487254 1.2:+54766347 MS.gene50543:CDS
GGAGAATGTATTCTTGGTGG+TGG 0.490065 1.2:+54760289 MS.gene50543:CDS
GCAAGTTGGAAGGTGAAAAT+GGG 0.490099 1.2:+54765237 MS.gene50543:CDS
ATGCTCTTCAAGTTTCCCCT+TGG 0.492455 1.2:-54764865 None:intergenic
ACATCCTTCAGGAGATTCCT+TGG 0.492799 1.2:+54766007 MS.gene50543:CDS
AATCAAAATACAGGCGGAAA+GGG 0.493030 1.2:+54761944 MS.gene50543:CDS
TTTGGTAAAATTGGAAACCA+TGG 0.493770 1.2:+54763087 MS.gene50543:CDS
TTGAGTTCTTGGGACTTATG+TGG 0.494173 1.2:-54760317 None:intergenic
GGTTTCTCTATATTCCCAAA+GGG 0.496528 1.2:+54763582 MS.gene50543:CDS
TCCACAGTGCTTTGGCTCAT+CGG 0.497368 1.2:+54762991 MS.gene50543:CDS
ACCGAACTTGATGTACTAAG+AGG 0.498597 1.2:+54763352 MS.gene50543:CDS
TTATCTTCAATCTGTCCTCC+AGG 0.499024 1.2:-54764590 None:intergenic
CGCTGACTTTCACAATAAAG+TGG 0.499651 1.2:+54762670 MS.gene50543:CDS
ATCAACTCTTGCTGCTGAGA+AGG 0.501753 1.2:+54763234 MS.gene50543:CDS
CATTCAAAGCACTGATAGCT+GGG 0.502438 1.2:-54765289 None:intergenic
GTATCCAAGATTTGGAGAAA+AGG 0.502936 1.2:+54763767 MS.gene50543:CDS
GAACGAATGTCTCGTGGGAC+AGG 0.503530 1.2:-54764464 None:intergenic
TTGGAGGATGAAAAGGAAGC+TGG 0.504217 1.2:+54761783 MS.gene50543:CDS
GAAAGAAAATGCAAAGTGCC+TGG 0.506368 1.2:+54763675 MS.gene50543:CDS
AATTCTGCTTTGAACAAGAC+AGG 0.506819 1.2:+54761549 MS.gene50543:CDS
GTTCATCATATGGAGTAAGC+AGG 0.507177 1.2:+54765856 MS.gene50543:CDS
AAAGTCTCTGGCACTCAACT+AGG 0.508091 1.2:-54763801 None:intergenic
TTTGGAACTAAAAGGAGAAA+GGG 0.508114 1.2:+54763528 MS.gene50543:CDS
CGGTGATGGCGACGGCGACT+CGG 0.508158 1.2:+54760250 None:intergenic
AATCCTTCTAACTTTCTCCT+CGG 0.509837 1.2:-54762204 None:intergenic
CTTTGACGACGATCTTCTGC+CGG 0.509963 1.2:-54765957 None:intergenic
GTTTGAAGGGCATGCTCGAA+GGG 0.510650 1.2:+54761617 MS.gene50543:CDS
ATGAGATTGGAAGTGTCAGC+AGG 0.511099 1.2:+54766360 MS.gene50543:CDS
GTATATGGTTCAGGAGAGTT+CGG 0.512260 1.2:-54764005 None:intergenic
ATTTGGAACTAAAAGGAGAA+AGG 0.513777 1.2:+54763527 MS.gene50543:CDS
TCAATGAAACACTGCTTCAA+GGG 0.516063 1.2:+54765123 MS.gene50543:CDS
CTTCTCCAAAAGCTTCTCCA+TGG 0.516457 1.2:-54763104 None:intergenic
GACCGTCAAAATGAAGAGCT+TGG 0.516532 1.2:+54764921 MS.gene50543:CDS
AGATGAAGATCAATCTGTTA+CGG 0.516564 1.2:+54765611 MS.gene50543:CDS
GGAAGCGGTAATCAAAATAC+AGG 0.517157 1.2:+54761935 MS.gene50543:CDS
ACTATTGAGAAGAGTACAAA+GGG 0.519100 1.2:+54766191 MS.gene50543:CDS
GAGTGAGGAGAAGGGTAACT+TGG 0.520153 1.2:+54764425 MS.gene50543:CDS
CTCCAGGAACTTAAACAGCT+TGG 0.521410 1.2:+54764531 MS.gene50543:CDS
ATTTCTGGTTCACTTCACTT+AGG 0.521928 1.2:-54764947 None:intergenic
CTAGGAGAATGTATTCTTGG+TGG 0.522313 1.2:+54760286 MS.gene50543:CDS
TTGCATGTTCTCGAGGGATG+AGG 0.522687 1.2:-54761593 None:intergenic
GAAGATCTGAGTGAGGAGAA+GGG 0.523252 1.2:+54764417 MS.gene50543:CDS
AATAGGACAACTTCAGTTGG+AGG 0.523913 1.2:+54766421 MS.gene50543:CDS
AAGATGCAGATTCCTTTGCC+AGG 0.529544 1.2:+54761211 MS.gene50543:CDS
CACTTTATTGTGAAAGTCAG+CGG 0.530065 1.2:-54762669 None:intergenic
GAGAATTATCAAAGAGTCGA+TGG 0.530102 1.2:+54761873 MS.gene50543:CDS
TGTTCGAGTAGAATCTGAAA+AGG 0.530320 1.2:+54762112 MS.gene50543:CDS
CTCTTGTTGTCTTCTTCACG+TGG 0.530973 1.2:-54766083 None:intergenic
TCAAACTTTGCATGTTCTCG+AGG 0.532172 1.2:-54761600 None:intergenic
GAGGATCAATGAAATTTCAA+TGG 0.535025 1.2:+54765671 MS.gene50543:CDS
CAAACTTTGCATGTTCTCGA+GGG 0.536244 1.2:-54761599 None:intergenic
CAGTCTTTGGCACACAAGAT+GGG 0.537044 1.2:+54762491 MS.gene50543:CDS
TTGAAGACTCTTGACATTCA+CGG 0.537474 1.2:+54763949 MS.gene50543:CDS
AGAGAGTTTATGTTCCAGAC+TGG 0.538887 1.2:-54762345 None:intergenic
TATGTGATTCGACATTCCCT+AGG 0.539614 1.2:-54762697 None:intergenic
AAAGAATCAGGAGTTGAAGT+TGG 0.539926 1.2:+54764242 MS.gene50543:CDS
TTTCAAGGAAAGCCACCACT+TGG 0.540917 1.2:+54764068 MS.gene50543:CDS
ATCTTCAAATCTTCCCATCA+AGG 0.542230 1.2:-54764400 None:intergenic
ATTCTTCACCAGCTTGCGGT+TGG 0.543654 1.2:-54766288 None:intergenic
TAAACTCTCTTGTGCTGAAG+AGG 0.543918 1.2:+54762358 MS.gene50543:CDS
GAGAACTTGACGAGGAGTCC+AGG 0.544082 1.2:+54764166 MS.gene50543:CDS
GTCTCCATGGAAGTAACCAT+TGG 0.546135 1.2:-54761414 None:intergenic
TTATAGGGCATACCGTGCAT+TGG 0.546838 1.2:+54761290 MS.gene50543:CDS
GAGAGAGATTCAAGAAGCAA+AGG 0.548343 1.2:+54765737 MS.gene50543:CDS
CTACATTCTTCACCAGCTTG+CGG 0.548502 1.2:-54766292 None:intergenic
CAGAGGAAAAGTAAATGTGT+TGG 0.551361 1.2:+54763180 MS.gene50543:CDS
AGTACGTGGCTCTGTCTCCA+TGG 0.551953 1.2:-54761427 None:intergenic
AGTTTGAAGGGCATGCTCGA+AGG 0.552929 1.2:+54761616 MS.gene50543:CDS
GAAAGCCCTTGCCAAATTGG+AGG 0.554029 1.2:+54761767 MS.gene50543:CDS
AACATGCCAGTCTCTGCTTG+TGG 0.554765 1.2:+54763207 MS.gene50543:CDS
TGAAACACTGCTTCAAGGGA+AGG 0.555869 1.2:+54765127 MS.gene50543:CDS
TCGTCAAAGAAGAGCATCCA+AGG 0.556762 1.2:+54765971 MS.gene50543:CDS
TTTCCAATTGTCCTCAGACA+AGG 0.557165 1.2:+54764899 MS.gene50543:CDS
AACTTGAAGAAACTAAGCTA+AGG 0.557889 1.2:+54765000 MS.gene50543:CDS
AGCTACTCTTCTTCAGTACC+AGG 0.558355 1.2:+54761968 MS.gene50543:CDS
AATCAGAACTGAATTCTCAA+TGG 0.559228 1.2:-54764091 None:intergenic
TACTAAACTTAATGAAGAGA+AGG 0.559579 1.2:+54762280 MS.gene50543:CDS
CATTTCCGCTCTCCTGGCAA+AGG 0.561069 1.2:-54761223 None:intergenic
GAGCTAAACAATGGAGGCCG+TGG 0.561432 1.2:+54761675 MS.gene50543:CDS
TAATCAAAATACAGGCGGAA+AGG 0.561897 1.2:+54761943 MS.gene50543:CDS
TTGTCAGATTAGGAATGAAA+GGG 0.562439 1.2:+54764722 MS.gene50543:CDS
CGGTTCAGAAAATAATAACC+TGG 0.562555 1.2:+54764572 MS.gene50543:CDS
GGAGAGATTGCGATTCATTG+AGG 0.563227 1.2:+54762580 MS.gene50543:CDS
GATTAGATATGATGATGCCA+AGG 0.563374 1.2:+54764848 MS.gene50543:CDS
AGCATTGTTTATATTGAACA+AGG 0.564130 1.2:-54762142 None:intergenic
AAATCGTCTGTAATCATCAC+AGG 0.564387 1.2:-54761390 None:intergenic
GAGTGATCCGTCATGCTCAT+CGG 0.564535 1.2:+54761337 MS.gene50543:CDS
TGGTTTCTCTATATTCCCAA+AGG 0.566371 1.2:+54763581 MS.gene50543:CDS
GAATAAATGAGATTGAACAA+TGG 0.568780 1.2:+54765054 MS.gene50543:CDS
ATTGCAAATAGAGTTCCAAA+AGG 0.569956 1.2:+54764212 MS.gene50543:CDS
TTTCAGATTCTACTCGAACA+AGG 0.571543 1.2:-54762109 None:intergenic
TGAAAAGCTTGAGAAGCTCT+CGG 0.571597 1.2:+54763288 MS.gene50543:CDS
TGAAGATGAAGTGGCCAACA+AGG 0.572143 1.2:+54763633 MS.gene50543:CDS
ATTAGGAAATGCTTCAGCCA+TGG 0.574632 1.2:-54761361 None:intergenic
ACTTTGGAGTTCCTTACAAG+AGG 0.576282 1.2:+54762559 MS.gene50543:CDS
GATACAGTCTAAGCAGTTCA+CGG 0.576419 1.2:+54764188 MS.gene50543:CDS
GAAAACAGAATTGCAAAGAA+CGG 0.576863 1.2:+54764812 MS.gene50543:CDS
CCAAAATGGCCGATCAAAGT+CGG 0.576997 1.2:+54766504 MS.gene50543:CDS
ACTCTCCTGAACCATATACA+TGG 0.577550 1.2:+54764009 MS.gene50543:CDS
TGAGAAAATTAAAATACTAA+GGG 0.577739 1.2:+54763909 MS.gene50543:CDS
GGAAAAGTAAATGTGTTGGA+AGG 0.577807 1.2:+54763184 MS.gene50543:CDS
AAGATTTGAAGATCTGAGTG+AGG 0.578270 1.2:+54764410 MS.gene50543:CDS
GTCTCTGGCACTCAACTAGG+AGG 0.578682 1.2:-54763798 None:intergenic
ACAATAAAGTGGAAATCCTA+GGG 0.579404 1.2:+54762681 MS.gene50543:CDS
GAATTAGTTAGCAAGTTGGA+AGG 0.579453 1.2:+54765227 MS.gene50543:CDS
GTTCGATGCCAACCGCAAGC+TGG 0.581375 1.2:+54766280 MS.gene50543:CDS
TCCTTCAGGAGATTCCTTGG+TGG 0.582609 1.2:+54766010 MS.gene50543:CDS
GGTCAAGAACTTGATAAGCT+CGG 0.584047 1.2:+54764552 MS.gene50543:CDS
TATTCAAAAGCAAGATGATG+TGG 0.584365 1.2:+54763876 MS.gene50543:CDS
ACTTCCAAGACCTGCAGAGG+AGG 0.584918 1.2:+54765652 MS.gene50543:CDS
CATATCTCTCGGCCAATGCA+CGG 0.585936 1.2:-54761302 None:intergenic
ACTTGAAGAAACTAAGCTAA+GGG 0.587700 1.2:+54765001 MS.gene50543:CDS
GATTACAGACGATTTACCAA+TGG 0.589018 1.2:+54761398 MS.gene50543:CDS
GAGTCCAGAAATGTACGTGA+AGG 0.591537 1.2:-54761465 None:intergenic
AGACGAGAACTCAAAGCTGA+AGG 0.593652 1.2:+54763027 MS.gene50543:CDS
TGTGTAAGGCCACCCACTAA+GGG 0.594039 1.2:+54766605 MS.gene50543:CDS
GAGAATGTATTCTTGGTGGT+GGG 0.594656 1.2:+54760290 MS.gene50543:CDS
TCTTCAATATCAGCAATGCT+TGG 0.596143 1.2:+54762313 MS.gene50543:CDS
TTCATCATATGGAGTAAGCA+GGG 0.596850 1.2:+54765857 MS.gene50543:CDS
GAACTGCTTAGACTGTATCC+TGG 0.596877 1.2:-54764184 None:intergenic
TCCACCAAGGAATCTCCTGA+AGG 0.599034 1.2:-54766011 None:intergenic
ATTAGATATGATGATGCCAA+GGG 0.599366 1.2:+54764849 MS.gene50543:CDS
GAGAATAGTGAGCTAAACAA+TGG 0.599612 1.2:+54761666 MS.gene50543:CDS
ACAGAAAGCGGTGATGGCGA+CGG 0.600586 1.2:+54760242 None:intergenic
CTAAGTTATGAAGTACATGA+AGG 0.600656 1.2:+54765032 MS.gene50543:CDS
TAGATTGAACGAATGTCTCG+TGG 0.601109 1.2:-54764470 None:intergenic
GAAGTTGAATGAAGATGAAG+TGG 0.602243 1.2:+54763624 MS.gene50543:CDS
AGTTCAAGACTTGAAGGAAG+CGG 0.602829 1.2:+54761920 MS.gene50543:CDS
ACTCTCTTGTGCTGAAGAGG+AGG 0.606683 1.2:+54762361 MS.gene50543:CDS
TGAAGAAGACAACAAGAGTA+GGG 0.607872 1.2:+54766088 MS.gene50543:CDS
GAGAACATGCAAAGTTTGAA+GGG 0.608059 1.2:+54761604 MS.gene50543:CDS
CCGTCATGCTCATCGGACCA+TGG 0.608652 1.2:+54761344 MS.gene50543:CDS
AGTTGCATGATCATATCTCT+CGG 0.608938 1.2:-54761313 None:intergenic
CCGAACTTGATGTACTAAGA+GGG 0.609912 1.2:+54763353 MS.gene50543:CDS
CCTTGGTGGAAAAGGAGTTG+GGG 0.610602 1.2:+54766024 MS.gene50543:CDS
AGAAATCAATCACCCTTAGT+GGG 0.613247 1.2:-54766617 None:intergenic
AGACATGAGCCTTAGTGCCA+CGG 0.616789 1.2:-54761692 None:intergenic
GTGAAGAAGACAACAAGAGT+AGG 0.617580 1.2:+54766087 MS.gene50543:CDS
AATTCTCAATGGCCAAGTGG+TGG 0.618262 1.2:-54764080 None:intergenic
ACATGTATCAGCTAGCTCAA+AGG 0.618865 1.2:-54765150 None:intergenic
GGAGAGATTAAAAGAATCCG+AGG 0.620033 1.2:+54762187 MS.gene50543:CDS
TCGACTTCCAAGACCTGCAG+AGG 0.620118 1.2:+54765649 MS.gene50543:CDS
GCTGGTGAAGAATGTAGAAG+AGG 0.621692 1.2:+54766298 MS.gene50543:CDS
AGGGTGCACTGTCTTCAGCT+GGG 0.621875 1.2:+54766318 MS.gene50543:CDS
TCATATGGAGTAAGCAGGGG+AGG 0.622148 1.2:+54765861 MS.gene50543:CDS
GCTGAGTTGGATAGTGTCAG+AGG 0.622351 1.2:+54763163 MS.gene50543:CDS
CATAAACTACTCGAAAGACA+TGG 0.625322 1.2:+54765187 MS.gene50543:CDS
CTGGTGAAGAATGTAGAAGA+GGG 0.626232 1.2:+54766299 MS.gene50543:CDS
AACTATTGAGAAGAGTACAA+AGG 0.627089 1.2:+54766190 MS.gene50543:CDS
TCTGCAGGTCTTGGAAGTCG+AGG 0.629376 1.2:-54765647 None:intergenic
AAAGTCGGAGAGTACGTTTG+CGG 0.631783 1.2:+54766519 MS.gene50543:CDS
AGATTGGAAGTGTCAGCAGG+AGG 0.632038 1.2:+54766363 MS.gene50543:CDS
GTGCTGAAGAGGAGGTGCGT+AGG 0.632311 1.2:+54762369 MS.gene50543:CDS
ATCTTTCAGAATTTGCTGAG+TGG 0.633785 1.2:-54763470 None:intergenic
AATAGAGAAACTTGAACAGG+AGG 0.633802 1.2:+54762844 MS.gene50543:CDS
ATGCACAGATATGGACGTCA+AGG 0.634287 1.2:+54761161 MS.gene50543:intron
AGTCCAGAAATGTACGTGAA+GGG 0.635028 1.2:-54761464 None:intergenic
CTTGGTGGAAAAGGAGTTGG+GGG 0.636806 1.2:+54766025 MS.gene50543:CDS
ATGATCATATGCTTGAGTTG+TGG 0.638104 1.2:+54765898 MS.gene50543:CDS
GTGTAAAGCATGAAACGTCT+TGG 0.641708 1.2:-54764784 None:intergenic
TGGCGTGTTTCTGGAGTACG+TGG 0.644024 1.2:-54761441 None:intergenic
TTGAAGTTGGCAATAAGCAA+AGG 0.644687 1.2:+54764255 MS.gene50543:CDS
AGATTCCTTTGCCAGGAGAG+CGG 0.644786 1.2:+54761218 MS.gene50543:CDS
CTGAATTCTCAATGGCCAAG+TGG 0.645914 1.2:-54764083 None:intergenic
GATTGAACAATGGGAAACCC+AGG 0.647429 1.2:+54765064 MS.gene50543:CDS
GGCTTGTAATTGGGAAAACA+AGG 0.647839 1.2:-54763260 None:intergenic
CCAGAAATGTACGTGAAGGG+TGG 0.648595 1.2:-54761461 None:intergenic
TCTCTGGCACTCAACTAGGA+GGG 0.649901 1.2:-54763797 None:intergenic
TGAAATGCACCGTGTCAATG+AGG 0.650046 1.2:+54762736 MS.gene50543:CDS
TTGAAGGGCATGCTCGAAGG+GGG 0.652093 1.2:+54761619 MS.gene50543:CDS
CCATGGTCCGATGAGCATGA+CGG 0.652603 1.2:-54761344 None:intergenic
TGATAAGACACAGAAGATTG+CGG 0.653033 1.2:+54765929 MS.gene50543:CDS
AGGTCTTGGAAGTCGAGGAG+AGG 0.656348 1.2:-54765642 None:intergenic
AGATTGAACGAATGTCTCGT+GGG 0.658399 1.2:-54764469 None:intergenic
GGAGACATTATCAAAACTGG+AGG 0.662374 1.2:+54762166 MS.gene50543:CDS
AGGAGATTGAACAGAAAATG+GGG 0.663420 1.2:+54765757 MS.gene50543:CDS
AATCAATCACCCTTAGTGGG+TGG 0.666883 1.2:-54766614 None:intergenic
TTTGAAGGGCATGCTCGAAG+GGG 0.668153 1.2:+54761618 MS.gene50543:CDS
AGCGGTAATCAAAATACAGG+CGG 0.668798 1.2:+54761938 MS.gene50543:CDS
GCATTGTTTATATTGAACAA+GGG 0.668847 1.2:-54762141 None:intergenic
AAATTCTAAGATAGACGATG+AGG 0.670513 1.2:+54762394 MS.gene50543:CDS
AACAGAATTGCAAAGAACGG+CGG 0.672848 1.2:+54764815 MS.gene50543:CDS
AGATCTCAAGAAGAATGTCA+CGG 0.675887 1.2:+54766060 MS.gene50543:CDS
AATAGTGAGCTAAACAATGG+AGG 0.676496 1.2:+54761669 MS.gene50543:CDS
TTCAGAAAATAATAACCTGG+AGG 0.680325 1.2:+54764575 MS.gene50543:CDS
AAAGCTGAAGGAGACATGTG+AGG 0.682253 1.2:+54763039 MS.gene50543:CDS
GTTTCGGAACAAGCGCAGAG+AGG 0.691187 1.2:+54766389 MS.gene50543:CDS
GTGCCTGGAACAAGAATACG+AGG 0.694943 1.2:+54763690 MS.gene50543:CDS
TCATCATATGGAGTAAGCAG+GGG 0.695084 1.2:+54765858 MS.gene50543:CDS
TTGTAATTGGGAAAACAAGG+TGG 0.707343 1.2:-54763257 None:intergenic
ACCGATGAGCCAAAGCACTG+TGG 0.710024 1.2:-54762992 None:intergenic
TTAGATATGATGATGCCAAG+GGG 0.730033 1.2:+54764850 MS.gene50543:CDS
CCTGGAACAAGAATACGAGG+AGG 0.770716 1.2:+54763693 MS.gene50543:CDS
ACATGAAGCTATGATCGACG+AGG 0.772783 1.2:+54762949 MS.gene50543:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAGAAAATTAAAATACTAA+GGG + chr1.2:54763909-54763928 MS.gene50543:CDS 15.0%
!!! TGACAAAATTATTTCTAAAT+TGG + chr1.2:54763843-54763862 MS.gene50543:CDS 15.0%
!! AAAATTAAAATACTAAGGGT+TGG + chr1.2:54763913-54763932 MS.gene50543:CDS 20.0%
!! AAATTAAAATACTAAGGGTT+GGG + chr1.2:54763914-54763933 MS.gene50543:CDS 20.0%
!! AATAAATGAGATTGAACAAT+GGG + chr1.2:54765055-54765074 MS.gene50543:CDS 20.0%
!! CAAATTATATGCATAAAGAA+AGG - chr1.2:54765513-54765532 None:intergenic 20.0%
!! CTGAGAAAATTAAAATACTA+AGG + chr1.2:54763908-54763927 MS.gene50543:CDS 20.0%
!! TAAAGAAAGGAAATAATAGT+TGG - chr1.2:54765500-54765519 None:intergenic 20.0%
!! TCAACATCTATAGTTATAAA+AGG - chr1.2:54760913-54760932 None:intergenic 20.0%
!!! AATAATTTTGTCAGACATTT+TGG - chr1.2:54763836-54763855 None:intergenic 20.0%
!!! AGCATAATTTATTTTGTTGA+TGG + chr1.2:54760558-54760577 MS.gene50543:intron 20.0%
!!! GCATAATTTATTTTGTTGAT+GGG + chr1.2:54760559-54760578 MS.gene50543:intron 20.0%
!!! GTTTTTACATTAAACTTCAA+AGG + chr1.2:54760511-54760530 MS.gene50543:intron 20.0%
! AAAATCATCAATAAATGACC+TGG - chr1.2:54765436-54765455 None:intergenic 25.0%
! AAATATCGTCATATCTTTCT+CGG - chr1.2:54761092-54761111 None:intergenic 25.0%
! AAGTATATTTCATCAATGTC+TGG + chr1.2:54760680-54760699 MS.gene50543:intron 25.0%
! AATCACCAATACAATGAAAA+TGG + chr1.2:54765579-54765598 MS.gene50543:CDS 25.0%
! AATCTTGTATGGTTATTTGA+AGG - chr1.2:54766154-54766173 None:intergenic 25.0%
! ACGTAAAAAAAAAAAACACC+CGG - chr1.2:54760843-54760862 None:intergenic 25.0%
! AGAAATTTACTGTCTTAAAG+AGG + chr1.2:54762904-54762923 MS.gene50543:CDS 25.0%
! AGCATTGTTTATATTGAACA+AGG - chr1.2:54762145-54762164 None:intergenic 25.0%
! ATACCTTAAAAGTTATTGTG+TGG + chr1.2:54760607-54760626 MS.gene50543:intron 25.0%
! ATATCTGAATGTTCATCATA+TGG + chr1.2:54765846-54765865 MS.gene50543:CDS 25.0%
! ATCAATTTGTAATTCCTTGT+TGG - chr1.2:54763650-54763669 None:intergenic 25.0%
! CAAATTAGAAAGTGAAGAAA+TGG + chr1.2:54764620-54764639 MS.gene50543:CDS 25.0%
! GAATAAATGAGATTGAACAA+TGG + chr1.2:54765054-54765073 MS.gene50543:CDS 25.0%
! GACTTTATTAAGCTGTTATA+TGG + chr1.2:54760787-54760806 MS.gene50543:intron 25.0%
! GCATTGTTTATATTGAACAA+GGG - chr1.2:54762144-54762163 None:intergenic 25.0%
! GTTTGTATTATATGAGTTGT+TGG + chr1.2:54761058-54761077 MS.gene50543:intron 25.0%
! TACTAAACTTAATGAAGAGA+AGG + chr1.2:54762280-54762299 MS.gene50543:CDS 25.0%
! TGACATATTGTTTCAGTATT+TGG + chr1.2:54765384-54765403 MS.gene50543:intron 25.0%
! TGTTCAATATAAACAATGCT+TGG + chr1.2:54762145-54762164 MS.gene50543:CDS 25.0%
! TTTCTTCATCAAATCTTGTA+TGG - chr1.2:54766165-54766184 None:intergenic 25.0%
!! AAATATTTCTTTTGCTCAGA+AGG + chr1.2:54762022-54762041 MS.gene50543:CDS 25.0%
!! CAAATAGTGAATTTTCCAAA+AGG - chr1.2:54763324-54763343 None:intergenic 25.0%
!! GCTCATTTTATGAAAAGAAA+TGG + chr1.2:54761507-54761526 MS.gene50543:CDS 25.0%
!! TTTTCTTTTAATGTAATGCC+AGG + chr1.2:54765415-54765434 MS.gene50543:intron 25.0%
!!! AAATGGTTGAAGAGTTTTAT+AGG + chr1.2:54761274-54761293 MS.gene50543:CDS 25.0%
!!! AAGATTTTAGAGTATTCGAA+TGG + chr1.2:54760650-54760669 MS.gene50543:intron 25.0%
!!! AATGGTTGAAGAGTTTTATA+GGG + chr1.2:54761275-54761294 MS.gene50543:CDS 25.0%
!!! AGCATTTTTTTCAAAACTAC+CGG + chr1.2:54760821-54760840 MS.gene50543:intron 25.0%
!!! CATTAATTTGTCCTATACTA+CGG - chr1.2:54760492-54760511 None:intergenic 25.0%
!!! GTTTTTCAGAGATAATATTC+TGG - chr1.2:54764512-54764531 None:intergenic 25.0%
AAAAATAGGACAACTTCAGT+TGG + chr1.2:54766418-54766437 MS.gene50543:CDS 30.0%
AAACAATATGTCAATACCTC+TGG - chr1.2:54765377-54765396 None:intergenic 30.0%
AAAGGAGATTGAACAGAAAA+TGG + chr1.2:54765755-54765774 MS.gene50543:CDS 30.0%
AACTTGAAGAAACTAAGCTA+AGG + chr1.2:54765000-54765019 MS.gene50543:CDS 30.0%
AAGCAAAGAGAAAACCAAAA+TGG + chr1.2:54766490-54766509 MS.gene50543:CDS 30.0%
AAGGAGATTGAACAGAAAAT+GGG + chr1.2:54765756-54765775 MS.gene50543:CDS 30.0%
AATCAGAACTGAATTCTCAA+TGG - chr1.2:54764094-54764113 None:intergenic 30.0%
AATCTCTCTCATTTCAACAT+TGG - chr1.2:54765727-54765746 None:intergenic 30.0%
AATCTGTTTCAGTTTCACTT+TGG + chr1.2:54760729-54760748 MS.gene50543:intron 30.0%
AATGCAAATGTTGAAGAGTT+TGG - chr1.2:54762619-54762638 None:intergenic 30.0%
ACAAGATTTGATGAAGAAAG+TGG + chr1.2:54766166-54766185 MS.gene50543:CDS 30.0%
ACAATAAAGTGGAAATCCTA+GGG + chr1.2:54762681-54762700 MS.gene50543:CDS 30.0%
ACTTGAAGAAACTAAGCTAA+GGG + chr1.2:54765001-54765020 MS.gene50543:CDS 30.0%
AGAAAGAATTGGGTAAACTT+TGG + chr1.2:54762543-54762562 MS.gene50543:CDS 30.0%
AGATGAAGATCAATCTGTTA+CGG + chr1.2:54765611-54765630 MS.gene50543:CDS 30.0%
ATCATCACAGGAATTTGATT+AGG - chr1.2:54761381-54761400 None:intergenic 30.0%
ATTGCAAATAGAGTTCCAAA+AGG + chr1.2:54764212-54764231 MS.gene50543:CDS 30.0%
CCATATACATGGAAAACTTA+AGG + chr1.2:54764020-54764039 MS.gene50543:CDS 30.0%
CCATTTCCAGGTTAAAAATT+TGG + chr1.2:54765554-54765573 MS.gene50543:intron 30.0%
CTAAGTTATGAAGTACATGA+AGG + chr1.2:54765032-54765051 MS.gene50543:CDS 30.0%
GAAAACAGAATTGCAAAGAA+CGG + chr1.2:54764812-54764831 MS.gene50543:CDS 30.0%
GAAAGAATTAGTTAGCAAGT+TGG + chr1.2:54765223-54765242 MS.gene50543:CDS 30.0%
GAGGATCAATGAAATTTCAA+TGG + chr1.2:54765671-54765690 MS.gene50543:CDS 30.0%
TAGTTGGTTACAAGTAGAAA+AGG - chr1.2:54765484-54765503 None:intergenic 30.0%
TATCATTGAGATAAGTTCAG+AGG - chr1.2:54761134-54761153 None:intergenic 30.0%
TATTCAAAAGCAAGATGATG+TGG + chr1.2:54763876-54763895 MS.gene50543:CDS 30.0%
TGAATTGGAACTAATGCATT+TGG + chr1.2:54763510-54763529 MS.gene50543:CDS 30.0%
TTCAGAAAATAATAACCTGG+AGG + chr1.2:54764575-54764594 MS.gene50543:CDS 30.0%
TTGTCAGATTAGGAATGAAA+GGG + chr1.2:54764722-54764741 MS.gene50543:CDS 30.0%
TTTGGTAAAATTGGAAACCA+TGG + chr1.2:54763087-54763106 MS.gene50543:CDS 30.0%
! AAAAGATACTGGACTTTTCA+TGG - chr1.2:54763417-54763436 None:intergenic 30.0%
! AACTATTGAGAAGAGTACAA+AGG + chr1.2:54766190-54766209 MS.gene50543:CDS 30.0%
! AATAGAGTTCCAAAAGGTAT+TGG + chr1.2:54764218-54764237 MS.gene50543:CDS 30.0%
! ACTATTGAGAAGAGTACAAA+GGG + chr1.2:54766191-54766210 MS.gene50543:CDS 30.0%
! ATTAGATATGATGATGCCAA+GGG + chr1.2:54764849-54764868 MS.gene50543:CDS 30.0%
! ATTCTAGGAGAATGTATTCT+TGG + chr1.2:54760283-54760302 MS.gene50543:CDS 30.0%
! ATTTGGAACTAAAAGGAGAA+AGG + chr1.2:54763527-54763546 MS.gene50543:CDS 30.0%
! CATTACCTGTAAGATTTTCT+TGG - chr1.2:54760350-54760369 None:intergenic 30.0%
! CCAAATTTTTAACCTGGAAA+TGG - chr1.2:54765557-54765576 None:intergenic 30.0%
! CCTTAAGTTTTCCATGTATA+TGG - chr1.2:54764023-54764042 None:intergenic 30.0%
! CTAATGCATTTGGAACTAAA+AGG + chr1.2:54763520-54763539 MS.gene50543:CDS 30.0%
! CTTCCACACAATAACTTTTA+AGG - chr1.2:54760613-54760632 None:intergenic 30.0%
! GATTCACCAAATTTTTAACC+TGG - chr1.2:54765563-54765582 None:intergenic 30.0%
! GATTCTTTTCCAATACCTTT+TGG - chr1.2:54764230-54764249 None:intergenic 30.0%
! GTTGACCATTTTCATTGTAT+TGG - chr1.2:54765587-54765606 None:intergenic 30.0%
! TATTATCTCTGAAAAACTCC+AGG + chr1.2:54764515-54764534 MS.gene50543:CDS 30.0%
! TCTTTGCAATTCTGTTTTCT+CGG - chr1.2:54764811-54764830 None:intergenic 30.0%
! TGTTTTCTTATCCGTAGTAT+AGG + chr1.2:54760478-54760497 MS.gene50543:intron 30.0%
! TTAAGGTATCATAGCAATCT+CGG - chr1.2:54760596-54760615 None:intergenic 30.0%
! TTCTTTCTCTGAAAAGATAC+TGG - chr1.2:54763428-54763447 None:intergenic 30.0%
! TTTGGAACTAAAAGGAGAAA+GGG + chr1.2:54763528-54763547 MS.gene50543:CDS 30.0%
!! AAAGGTATTGGAAAAGAATC+AGG + chr1.2:54764230-54764249 MS.gene50543:CDS 30.0%
!! AAATTCTAAGATAGACGATG+AGG + chr1.2:54762394-54762413 MS.gene50543:CDS 30.0%
!! AAGGTGTTTTCTTCTTCTTT+TGG - chr1.2:54766577-54766596 None:intergenic 30.0%
!! ATCAATTGACTTGTCAGATT+AGG + chr1.2:54764712-54764731 MS.gene50543:CDS 30.0%
!! ATGTTTGTTGTATGTTTCCT+TGG - chr1.2:54765991-54766010 None:intergenic 30.0%
!! ATTGATGATTTTGTGACGAA+AGG + chr1.2:54765444-54765463 MS.gene50543:intron 30.0%
!! TCAAAAGGAAAAAGTGCTTT+CGG + chr1.2:54764755-54764774 MS.gene50543:CDS 30.0%
!! TTGATGATTTTGTGACGAAA+GGG + chr1.2:54765445-54765464 MS.gene50543:intron 30.0%
!! TTTCTTCTTCTTTTGGTTGT+TGG - chr1.2:54766570-54766589 None:intergenic 30.0%
!!! GCATTTTTTTCAAAACTACC+GGG + chr1.2:54760822-54760841 MS.gene50543:intron 30.0%
!!! TTTTGTTTTCCTCATTGACA+CGG - chr1.2:54762748-54762767 None:intergenic 30.0%
!!! TTTTTTCCTGTAAGTTGTTG+TGG - chr1.2:54764353-54764372 None:intergenic 30.0%
AAAAGCCGAAGCAGAAATTT+CGG + chr1.2:54761737-54761756 MS.gene50543:CDS 35.0%
AAAGAATCAGGAGTTGAAGT+TGG + chr1.2:54764242-54764261 MS.gene50543:CDS 35.0%
AAATCGTCTGTAATCATCAC+AGG - chr1.2:54761393-54761412 None:intergenic 35.0%
AACAGAAAATGGGGAGTTTA+AGG + chr1.2:54765766-54765785 MS.gene50543:CDS 35.0%
AACGAGAAGCAGAAAGAATT+GGG + chr1.2:54762533-54762552 MS.gene50543:CDS 35.0%
AAGATTTGAAGATCTGAGTG+AGG + chr1.2:54764410-54764429 MS.gene50543:CDS 35.0%
AAGTGAAGTGAACCAGAAAT+TGG + chr1.2:54764950-54764969 MS.gene50543:CDS 35.0%
AATAGAGAAACTTGAACAGG+AGG + chr1.2:54762844-54762863 MS.gene50543:CDS 35.0%
AATAGTGAGCTAAACAATGG+AGG + chr1.2:54761669-54761688 MS.gene50543:CDS 35.0%
AATCAAAATACAGGCGGAAA+GGG + chr1.2:54761944-54761963 MS.gene50543:CDS 35.0%
AATCCTTCTAACTTTCTCCT+CGG - chr1.2:54762207-54762226 None:intergenic 35.0%
ACAGTCTGAATTACAGTCTT+TGG + chr1.2:54762478-54762497 MS.gene50543:CDS 35.0%
ACATACAACAAACATCCTTC+AGG + chr1.2:54765996-54766015 MS.gene50543:CDS 35.0%
ACATTTGCATTCTCAATCTC+AGG + chr1.2:54762628-54762647 MS.gene50543:CDS 35.0%
AGATCTCAAGAAGAATGTCA+CGG + chr1.2:54766060-54766079 MS.gene50543:CDS 35.0%
AGGAGATTGAACAGAAAATG+GGG + chr1.2:54765757-54765776 MS.gene50543:CDS 35.0%
AGTTGCATGATCATATCTCT+CGG - chr1.2:54761316-54761335 None:intergenic 35.0%
ATATTTCATCAATGTCTGGC+TGG + chr1.2:54760684-54760703 MS.gene50543:intron 35.0%
ATCTCAGTTACAGGATTATC+TGG - chr1.2:54765792-54765811 None:intergenic 35.0%
ATCTTCAAATCTTCCCATCA+AGG - chr1.2:54764403-54764422 None:intergenic 35.0%
ATTGAGATAAGTTCAGAGGA+TGG - chr1.2:54761130-54761149 None:intergenic 35.0%
CACAATAAAGTGGAAATCCT+AGG + chr1.2:54762680-54762699 MS.gene50543:CDS 35.0%
CACTTTATTGTGAAAGTCAG+CGG - chr1.2:54762672-54762691 None:intergenic 35.0%
CAGAGAGGATCAGAAAAAAT+AGG + chr1.2:54766404-54766423 MS.gene50543:CDS 35.0%
CAGAGGAAAAGTAAATGTGT+TGG + chr1.2:54763180-54763199 MS.gene50543:CDS 35.0%
CATAAACTACTCGAAAGACA+TGG + chr1.2:54765187-54765206 MS.gene50543:CDS 35.0%
CGGTTCAGAAAATAATAACC+TGG + chr1.2:54764572-54764591 MS.gene50543:CDS 35.0%
CTCTTTAACGGTATCATACT+CGG - chr1.2:54766225-54766244 None:intergenic 35.0%
CTTGGAGAAAATAACAGATC+TGG + chr1.2:54761995-54762014 MS.gene50543:CDS 35.0%
CTTGGAGACATTATCAAAAC+TGG + chr1.2:54762163-54762182 MS.gene50543:CDS 35.0%
CTTGTCAGATTAGGAATGAA+AGG + chr1.2:54764721-54764740 MS.gene50543:CDS 35.0%
GAAGAGAAAAACTCCTTGAT+GGG + chr1.2:54764387-54764406 MS.gene50543:CDS 35.0%
GAAGTTGAATGAAGATGAAG+TGG + chr1.2:54763624-54763643 MS.gene50543:CDS 35.0%
GAATGATTGTGTTACATCTC+TGG + chr1.2:54765307-54765326 MS.gene50543:CDS 35.0%
GACAATAGAGAAACTTGAAC+AGG + chr1.2:54762841-54762860 MS.gene50543:CDS 35.0%
GAGAACATGCAAAGTTTGAA+GGG + chr1.2:54761604-54761623 MS.gene50543:CDS 35.0%
GAGAATAGTGAGCTAAACAA+TGG + chr1.2:54761666-54761685 MS.gene50543:CDS 35.0%
GAGAATTATCAAAGAGTCGA+TGG + chr1.2:54761873-54761892 MS.gene50543:CDS 35.0%
GATTACAGACGATTTACCAA+TGG + chr1.2:54761398-54761417 MS.gene50543:CDS 35.0%
GGAAAAGTAAATGTGTTGGA+AGG + chr1.2:54763184-54763203 MS.gene50543:CDS 35.0%
GGTTTCTCTATATTCCCAAA+GGG + chr1.2:54763582-54763601 MS.gene50543:CDS 35.0%
GTATCCAAGATTTGGAGAAA+AGG + chr1.2:54763767-54763786 MS.gene50543:CDS 35.0%
GTGTGGTGACATGATTTATT+TGG + chr1.2:54760936-54760955 MS.gene50543:intron 35.0%
GTTCTATAATCACCATTTCC+AGG + chr1.2:54765542-54765561 MS.gene50543:intron 35.0%
TAAAAAGGTAGAAGAGCTAC+TGG + chr1.2:54763561-54763580 MS.gene50543:CDS 35.0%
TAACGAGAAGCAGAAAGAAT+TGG + chr1.2:54762532-54762551 MS.gene50543:CDS 35.0%
TAAGTCCCAAGAACTCAAAA+TGG + chr1.2:54760322-54760341 MS.gene50543:CDS 35.0%
TAATCAAAATACAGGCGGAA+AGG + chr1.2:54761943-54761962 MS.gene50543:CDS 35.0%
TCAATGAAACACTGCTTCAA+GGG + chr1.2:54765123-54765142 MS.gene50543:CDS 35.0%
TCATCAGAATCAGATGAGAT+TGG + chr1.2:54766347-54766366 MS.gene50543:CDS 35.0%
TCATGACTATGAAAAACCAG+AGG + chr1.2:54765358-54765377 MS.gene50543:CDS 35.0%
TCATTTCAGACTCCAATTTC+TGG - chr1.2:54764965-54764984 None:intergenic 35.0%
TCTTCAATATCAGCAATGCT+TGG + chr1.2:54762313-54762332 MS.gene50543:CDS 35.0%
TGAAAAGCAACACAGTGAAT+TGG + chr1.2:54763495-54763514 MS.gene50543:CDS 35.0%
TGAAGAAGACAACAAGAGTA+GGG + chr1.2:54766088-54766107 MS.gene50543:CDS 35.0%
TGAAGAGAAAAACTCCTTGA+TGG + chr1.2:54764386-54764405 MS.gene50543:CDS 35.0%
TGATAAGACACAGAAGATTG+CGG + chr1.2:54765929-54765948 MS.gene50543:CDS 35.0%
TGGTTTCTCTATATTCCCAA+AGG + chr1.2:54763581-54763600 MS.gene50543:CDS 35.0%
TGTTCGAGTAGAATCTGAAA+AGG + chr1.2:54762112-54762131 MS.gene50543:CDS 35.0%
TTCATCATATGGAGTAAGCA+GGG + chr1.2:54765857-54765876 MS.gene50543:CDS 35.0%
TTGAAGACTCTTGACATTCA+CGG + chr1.2:54763949-54763968 MS.gene50543:CDS 35.0%
TTGAAGTTGGCAATAAGCAA+AGG + chr1.2:54764255-54764274 MS.gene50543:CDS 35.0%
TTGGTTACAAGTAGAAAAGG+AGG - chr1.2:54765481-54765500 None:intergenic 35.0%
TTGTAATTGGGAAAACAAGG+TGG - chr1.2:54763260-54763279 None:intergenic 35.0%
TTTACCAATGGTTACTTCCA+TGG + chr1.2:54761410-54761429 MS.gene50543:CDS 35.0%
TTTCAGATTCTACTCGAACA+AGG - chr1.2:54762112-54762131 None:intergenic 35.0%
! AAATTTCAGCTGTTTCCTTC+AGG + chr1.2:54760966-54760985 MS.gene50543:intron 35.0%
! AATTCTGCTTTGAACAAGAC+AGG + chr1.2:54761549-54761568 MS.gene50543:CDS 35.0%
! AATTTCAGCTGTTTCCTTCA+GGG + chr1.2:54760967-54760986 MS.gene50543:intron 35.0%
! AGTTCCTTTTCTCCAAATCT+TGG - chr1.2:54763774-54763793 None:intergenic 35.0%
! ATCCAAGCTCTTCATTTTGA+CGG - chr1.2:54764926-54764945 None:intergenic 35.0%
! ATGATCATATGCTTGAGTTG+TGG + chr1.2:54765898-54765917 MS.gene50543:CDS 35.0%
! CAACCATTTTCATAAGCTCT+GGG - chr1.2:54761263-54761282 None:intergenic 35.0%
! CTCGGAAAATAACAACCTTT+TGG + chr1.2:54763306-54763325 MS.gene50543:CDS 35.0%
! GAATTAGTTAGCAAGTTGGA+AGG + chr1.2:54765227-54765246 MS.gene50543:CDS 35.0%
! GATTAGATATGATGATGCCA+AGG + chr1.2:54764848-54764867 MS.gene50543:CDS 35.0%
! GCTTAGTTTCTTCAAGTTCT+TGG - chr1.2:54764998-54765017 None:intergenic 35.0%
! GTCTTGTTCAAAGCAGAATT+CGG - chr1.2:54761549-54761568 None:intergenic 35.0%
! GTCTTTTGACACGATTTTCA+AGG + chr1.2:54764053-54764072 MS.gene50543:CDS 35.0%
! GTTTTCCATGTATATGGTTC+AGG - chr1.2:54764017-54764036 None:intergenic 35.0%
! TATTTCAGCTGTTTCCTTCA+GGG + chr1.2:54761015-54761034 MS.gene50543:intron 35.0%
! TCAACCATTTTCATAAGCTC+TGG - chr1.2:54761264-54761283 None:intergenic 35.0%
! TGATCAAGCATGATGTCTTT+TGG - chr1.2:54765825-54765844 None:intergenic 35.0%
! TGATCATATGCTTGAGTTGT+GGG + chr1.2:54765899-54765918 MS.gene50543:CDS 35.0%
! TGGAATGTTCTTCTGGTTAT+AGG + chr1.2:54760749-54760768 MS.gene50543:intron 35.0%
! TTAGATATGATGATGCCAAG+GGG + chr1.2:54764850-54764869 MS.gene50543:CDS 35.0%
! TTATTTTCTCCAAGCATTCC+TGG - chr1.2:54761989-54762008 None:intergenic 35.0%
! TTCAGTTGTGGCTTGTAATT+GGG - chr1.2:54763272-54763291 None:intergenic 35.0%
! TTCCTTTTCATCCTCCAATT+TGG - chr1.2:54761781-54761800 None:intergenic 35.0%
! TTTCAGTTGTGGCTTGTAAT+TGG - chr1.2:54763273-54763292 None:intergenic 35.0%
! TTTCTTCAAGTTCTTGGTGT+AGG - chr1.2:54764992-54765011 None:intergenic 35.0%
!! ACTGGCTCTTTTGGTAAAAT+TGG + chr1.2:54763078-54763097 MS.gene50543:CDS 35.0%
!! ATCTTTCAGAATTTGCTGAG+TGG - chr1.2:54763473-54763492 None:intergenic 35.0%
!! ATTTCTGGTTCACTTCACTT+AGG - chr1.2:54764950-54764969 None:intergenic 35.0%
!! TCTCATTTCAACATTGGCTT+TGG - chr1.2:54765721-54765740 None:intergenic 35.0%
!! TGAAATCGAAGCTTTGAAGT+TGG + chr1.2:54762253-54762272 MS.gene50543:CDS 35.0%
!! TTCACTTTGGAATGTTCTTC+TGG + chr1.2:54760742-54760761 MS.gene50543:intron 35.0%
!!! TGAACAGAAGTGTCTTCTTT+TGG + chr1.2:54762436-54762455 MS.gene50543:CDS 35.0%
AAAGAAAGCCCTTGCCAAAT+TGG + chr1.2:54761764-54761783 MS.gene50543:CDS 40.0%
AAAGAGCCACAACAACTTAC+AGG + chr1.2:54764344-54764363 MS.gene50543:CDS 40.0%
AACAGAATTGCAAAGAACGG+CGG + chr1.2:54764815-54764834 MS.gene50543:CDS 40.0%
AAGCAAAGGAGAAGAGAGAA+TGG + chr1.2:54764269-54764288 MS.gene50543:CDS 40.0%
AAGGGACATGTTGTGTCAAA+AGG + chr1.2:54764740-54764759 MS.gene50543:CDS 40.0%
AAGGGAGTCGTCACTTAAAA+AGG + chr1.2:54763546-54763565 MS.gene50543:CDS 40.0%
AATAGGACAACTTCAGTTGG+AGG + chr1.2:54766421-54766440 MS.gene50543:CDS 40.0%
AATCCGAGGAGAAAGTTAGA+AGG + chr1.2:54762201-54762220 MS.gene50543:CDS 40.0%
ACATGTATCAGCTAGCTCAA+AGG - chr1.2:54765153-54765172 None:intergenic 40.0%
ACCGAACTTGATGTACTAAG+AGG + chr1.2:54763352-54763371 MS.gene50543:CDS 40.0%
ACTACCAAAGCCAGAAAGAT+AGG - chr1.2:54760376-54760395 None:intergenic 40.0%
ACTATAGATGTTGAAGCGTG+TGG + chr1.2:54760919-54760938 MS.gene50543:intron 40.0%
ACTCTCCTGAACCATATACA+TGG + chr1.2:54764009-54764028 MS.gene50543:CDS 40.0%
AGAAAAACGAGAACTTGACG+AGG + chr1.2:54764158-54764177 MS.gene50543:CDS 40.0%
AGAGAGTTTATGTTCCAGAC+TGG - chr1.2:54762348-54762367 None:intergenic 40.0%
AGATTGAACGAATGTCTCGT+GGG - chr1.2:54764472-54764491 None:intergenic 40.0%
AGCACTTCAATCTCAGTTAC+AGG - chr1.2:54765801-54765820 None:intergenic 40.0%
AGCGGTAATCAAAATACAGG+CGG + chr1.2:54761938-54761957 MS.gene50543:CDS 40.0%
AGCTGAAGTTCAAGACTTGA+AGG + chr1.2:54761914-54761933 MS.gene50543:CDS 40.0%
AGTCCAGAAATGTACGTGAA+GGG - chr1.2:54761467-54761486 None:intergenic 40.0%
AGTTCAAGACTTGAAGGAAG+CGG + chr1.2:54761920-54761939 MS.gene50543:CDS 40.0%
ATTAGGAAATGCTTCAGCCA+TGG - chr1.2:54761364-54761383 None:intergenic 40.0%
CAAACTTTGCATGTTCTCGA+GGG - chr1.2:54761602-54761621 None:intergenic 40.0%
CCCTCTTAGTACATCAAGTT+CGG - chr1.2:54763356-54763375 None:intergenic 40.0%
CCGAACTTGATGTACTAAGA+GGG + chr1.2:54763353-54763372 MS.gene50543:CDS 40.0%
CGAGAACATGCAAAGTTTGA+AGG + chr1.2:54761603-54761622 MS.gene50543:CDS 40.0%
CGCTTCAAACTGCTCTTTAA+CGG - chr1.2:54766237-54766256 None:intergenic 40.0%
CTAGGAGAATGTATTCTTGG+TGG + chr1.2:54760286-54760305 MS.gene50543:CDS 40.0%
CTCAGCATTCAAGTCTGAAA+TGG - chr1.2:54763149-54763168 None:intergenic 40.0%
CTGGTGAAGAATGTAGAAGA+GGG + chr1.2:54766299-54766318 MS.gene50543:CDS 40.0%
CTTGGAGATAATTTCCAGTC+TGG + chr1.2:54762331-54762350 MS.gene50543:CDS 40.0%
GAGAGAGATTCAAGAAGCAA+AGG + chr1.2:54765737-54765756 MS.gene50543:CDS 40.0%
GAGAGATATGATCATGCAAC+TGG + chr1.2:54761315-54761334 MS.gene50543:CDS 40.0%
GATACAGTCTAAGCAGTTCA+CGG + chr1.2:54764188-54764207 MS.gene50543:CDS 40.0%
GATTTAGATCCACAGTGCTT+TGG + chr1.2:54762983-54763002 MS.gene50543:CDS 40.0%
GGAAGCGGTAATCAAAATAC+AGG + chr1.2:54761935-54761954 MS.gene50543:CDS 40.0%
GGAGACATTATCAAAACTGG+AGG + chr1.2:54762166-54762185 MS.gene50543:CDS 40.0%
GGAGAGATTAAAAGAATCCG+AGG + chr1.2:54762187-54762206 MS.gene50543:CDS 40.0%
GGAGGACAGATTGAAGATAA+TGG + chr1.2:54764593-54764612 MS.gene50543:CDS 40.0%
GGCTGAAAAAGATGAGAAAC+TGG + chr1.2:54763060-54763079 MS.gene50543:CDS 40.0%
GGCTTGTAATTGGGAAAACA+AGG - chr1.2:54763263-54763282 None:intergenic 40.0%
GTATATGGTTCAGGAGAGTT+CGG - chr1.2:54764008-54764027 None:intergenic 40.0%
GTCAATGAAACACTGCTTCA+AGG + chr1.2:54765122-54765141 MS.gene50543:CDS 40.0%
GTGAAGAAGACAACAAGAGT+AGG + chr1.2:54766087-54766106 MS.gene50543:CDS 40.0%
GTGTAAAGCATGAAACGTCT+TGG - chr1.2:54764787-54764806 None:intergenic 40.0%
GTTCATCATATGGAGTAAGC+AGG + chr1.2:54765856-54765875 MS.gene50543:CDS 40.0%
TAAACTCTCTTGTGCTGAAG+AGG + chr1.2:54762358-54762377 MS.gene50543:CDS 40.0%
TAAGGCCGAAATTTCTGCTT+CGG - chr1.2:54761745-54761764 None:intergenic 40.0%
TAGATTGAACGAATGTCTCG+TGG - chr1.2:54764473-54764492 None:intergenic 40.0%
TATCTCGTGATGCACAGATA+TGG + chr1.2:54761152-54761171 MS.gene50543:intron 40.0%
TATGTGATTCGACATTCCCT+AGG - chr1.2:54762700-54762719 None:intergenic 40.0%
TCAAACTTTGCATGTTCTCG+AGG - chr1.2:54761603-54761622 None:intergenic 40.0%
TCATCATATGGAGTAAGCAG+GGG + chr1.2:54765858-54765877 MS.gene50543:CDS 40.0%
TGAAAAGCTTGAGAAGCTCT+CGG + chr1.2:54763288-54763307 MS.gene50543:CDS 40.0%
TGCCAAATTGGAGGATGAAA+AGG + chr1.2:54761776-54761795 MS.gene50543:CDS 40.0%
TGGCTCCAAGAAAATCTTAC+AGG + chr1.2:54760342-54760361 MS.gene50543:CDS 40.0%
TTATCTTCAATCTGTCCTCC+AGG - chr1.2:54764593-54764612 None:intergenic 40.0%
TTCAGACTTGAATGCTGAGT+TGG + chr1.2:54763150-54763169 MS.gene50543:CDS 40.0%
TTCATCCTCCAATTTGGCAA+GGG - chr1.2:54761775-54761794 None:intergenic 40.0%
TTCGTGACTTGACACATTCT+TGG + chr1.2:54760427-54760446 MS.gene50543:intron 40.0%
TTGAGTTCTTGGGACTTATG+TGG - chr1.2:54760320-54760339 None:intergenic 40.0%
TTTCATCCTCCAATTTGGCA+AGG - chr1.2:54761776-54761795 None:intergenic 40.0%
TTTCCAATTGTCCTCAGACA+AGG + chr1.2:54764899-54764918 MS.gene50543:CDS 40.0%
TTTGGCAAGGGCTTTCTTTA+AGG - chr1.2:54761763-54761782 None:intergenic 40.0%
TTTGTCCATACACACTTTGC+AGG + chr1.2:54762796-54762815 MS.gene50543:CDS 40.0%
! ACTTTTCATGGTCAAGTGAC+TGG - chr1.2:54763405-54763424 None:intergenic 40.0%
! AGACAACAAGAGTAGGGTTT+TGG + chr1.2:54766094-54766113 MS.gene50543:CDS 40.0%
! AGCAAGTTGGAAGGTGAAAA+TGG + chr1.2:54765236-54765255 MS.gene50543:CDS 40.0%
! CACCTTTTTGTGCATGTGTA+AGG + chr1.2:54766591-54766610 MS.gene50543:CDS 40.0%
! CTTCTCAAGCTTTTCAGTTG+TGG - chr1.2:54763284-54763303 None:intergenic 40.0%
! CTTGACACATTCTTGGTTTG+AGG + chr1.2:54760434-54760453 MS.gene50543:intron 40.0%
! GAAAGAAAATGCAAAGTGCC+TGG + chr1.2:54763675-54763694 MS.gene50543:CDS 40.0%
! GAGAATGTATTCTTGGTGGT+GGG + chr1.2:54760290-54760309 MS.gene50543:CDS 40.0%
! GCAAGTTGGAAGGTGAAAAT+GGG + chr1.2:54765237-54765256 MS.gene50543:CDS 40.0%
! GCAGAAGTGTATCCAAGATT+TGG + chr1.2:54763759-54763778 MS.gene50543:CDS 40.0%
! GTATTTCAGCTGTTTCCTTC+AGG + chr1.2:54761014-54761033 MS.gene50543:intron 40.0%
!! ACTTTGGAGTTCCTTACAAG+AGG + chr1.2:54762559-54762578 MS.gene50543:CDS 40.0%
!! AGATGAGAAACTGGCTCTTT+TGG + chr1.2:54763069-54763088 MS.gene50543:CDS 40.0%
!! CATTCAAAGCACTGATAGCT+GGG - chr1.2:54765292-54765311 None:intergenic 40.0%
!! CGCTGACTTTCACAATAAAG+TGG + chr1.2:54762670-54762689 MS.gene50543:CDS 40.0%
!! GGTGTTCAACTCTGAAACTA+AGG - chr1.2:54763452-54763471 None:intergenic 40.0%
!! TCATTCAAAGCACTGATAGC+TGG - chr1.2:54765293-54765312 None:intergenic 40.0%
!! TGAAGTTGAGTCTTTGAAGC+AGG + chr1.2:54762085-54762104 MS.gene50543:CDS 40.0%
!!! CAATTTTTTAGAGACGCAGG+AGG + chr1.2:54761644-54761663 MS.gene50543:CDS 40.0%
!!! GCTCAATTTTTTAGAGACGC+AGG + chr1.2:54761641-54761660 MS.gene50543:CDS 40.0%
!!! TGGAGCCATTTTGAGTTCTT+GGG - chr1.2:54760330-54760349 None:intergenic 40.0%
!!! TTGGAGCCATTTTGAGTTCT+TGG - chr1.2:54760331-54760350 None:intergenic 40.0%
AAAGCTGAAGGAGACATGTG+AGG + chr1.2:54763039-54763058 MS.gene50543:CDS 45.0%
AAAGTCTCTGGCACTCAACT+AGG - chr1.2:54763804-54763823 None:intergenic 45.0%
AAGATGCAGATTCCTTTGCC+AGG + chr1.2:54761211-54761230 MS.gene50543:CDS 45.0%
AATTCTCAATGGCCAAGTGG+TGG - chr1.2:54764083-54764102 None:intergenic 45.0%
ACAAGAATACGAGGAGGAAC+TGG + chr1.2:54763699-54763718 MS.gene50543:CDS 45.0%
ACAGTCTTTGGCACACAAGA+TGG + chr1.2:54762490-54762509 MS.gene50543:CDS 45.0%
ACATCCTTCAGGAGATTCCT+TGG + chr1.2:54766007-54766026 MS.gene50543:CDS 45.0%
ACATGAAGCTATGATCGACG+AGG + chr1.2:54762949-54762968 MS.gene50543:CDS 45.0%
ACCAAAGCCAGAAAGATAGG+AGG - chr1.2:54760373-54760392 None:intergenic 45.0%
ACGTACTCTCCGACTTTGAT+CGG - chr1.2:54766516-54766535 None:intergenic 45.0%
AGAACTCTTTGCTGAACTGC+AGG + chr1.2:54765091-54765110 MS.gene50543:CDS 45.0%
AGACGAGAACTCAAAGCTGA+AGG + chr1.2:54763027-54763046 MS.gene50543:CDS 45.0%
AGCTACTCTTCTTCAGTACC+AGG + chr1.2:54761968-54761987 MS.gene50543:CDS 45.0%
AGGAGATTCCTTGGTGGAAA+AGG + chr1.2:54766016-54766035 MS.gene50543:CDS 45.0%
ATAGTACATTTCCGCTCTCC+TGG - chr1.2:54761232-54761251 None:intergenic 45.0%
ATCAACTCTTGCTGCTGAGA+AGG + chr1.2:54763234-54763253 MS.gene50543:CDS 45.0%
ATGCACAGATATGGACGTCA+AGG + chr1.2:54761161-54761180 MS.gene50543:intron 45.0%
ATTTCTCCACAAGCAGAGAC+TGG - chr1.2:54763216-54763235 None:intergenic 45.0%
CAGTCTTTGGCACACAAGAT+GGG + chr1.2:54762491-54762510 MS.gene50543:CDS 45.0%
CCAAAATGGCCGATCAAAGT+CGG + chr1.2:54766504-54766523 MS.gene50543:CDS 45.0%
CGTTTGCGGGATTATCTCTA+TGG + chr1.2:54766533-54766552 MS.gene50543:CDS 45.0%
CTACATTCTTCACCAGCTTG+CGG - chr1.2:54766295-54766314 None:intergenic 45.0%
CTCATCCTGCAAAGTGTGTA+TGG - chr1.2:54762804-54762823 None:intergenic 45.0%
CTCCAGGAACTTAAACAGCT+TGG + chr1.2:54764531-54764550 MS.gene50543:CDS 45.0%
CTGAATTCTCAATGGCCAAG+TGG - chr1.2:54764086-54764105 None:intergenic 45.0%
CTTCTCCAAAAGCTTCTCCA+TGG - chr1.2:54763107-54763126 None:intergenic 45.0%
GAACTGCTTAGACTGTATCC+TGG - chr1.2:54764187-54764206 None:intergenic 45.0%
GAAGATCTGAGTGAGGAGAA+GGG + chr1.2:54764417-54764436 MS.gene50543:CDS 45.0%
GACCGTCAAAATGAAGAGCT+TGG + chr1.2:54764921-54764940 MS.gene50543:CDS 45.0%
GAGTCCAGAAATGTACGTGA+AGG - chr1.2:54761468-54761487 None:intergenic 45.0%
GATTGAACAATGGGAAACCC+AGG + chr1.2:54765064-54765083 MS.gene50543:CDS 45.0%
GCTGGTGAAGAATGTAGAAG+AGG + chr1.2:54766298-54766317 MS.gene50543:CDS 45.0%
GCTTCAGTATCAGCAGAGTT+TGG + chr1.2:54761809-54761828 MS.gene50543:CDS 45.0%
GGAGAATGTATTCTTGGTGG+TGG + chr1.2:54760289-54760308 MS.gene50543:CDS 45.0%
GGAGAGATTGCGATTCATTG+AGG + chr1.2:54762580-54762599 MS.gene50543:CDS 45.0%
GGCCTTACACATGCACAAAA+AGG - chr1.2:54766596-54766615 None:intergenic 45.0%
GGTAATGCCTCCTATCTTTC+TGG + chr1.2:54760363-54760382 MS.gene50543:intron 45.0%
GTCTCCATGGAAGTAACCAT+TGG - chr1.2:54761417-54761436 None:intergenic 45.0%
TCCTTGGTGGAAAAGGAGTT+GGG + chr1.2:54766023-54766042 MS.gene50543:CDS 45.0%
TCGCAATCTCTCCTCTTGTA+AGG - chr1.2:54762573-54762592 None:intergenic 45.0%
TCTGCAATGCTCTTCCCTTT+GGG - chr1.2:54763599-54763618 None:intergenic 45.0%
TCTTCAGTACCAGGAATGCT+TGG + chr1.2:54761977-54761996 MS.gene50543:CDS 45.0%
TGAAACACTGCTTCAAGGGA+AGG + chr1.2:54765127-54765146 MS.gene50543:CDS 45.0%
TGAAATGCACCGTGTCAATG+AGG + chr1.2:54762736-54762755 MS.gene50543:CDS 45.0%
TGAAGATCTGAGTGAGGAGA+AGG + chr1.2:54764416-54764435 MS.gene50543:CDS 45.0%
TGAAGATGAAGTGGCCAACA+AGG + chr1.2:54763633-54763652 MS.gene50543:CDS 45.0%
TGCATGTAGAATGTCCCTGA+AGG - chr1.2:54760984-54761003 None:intergenic 45.0%
TTATAGGGCATACCGTGCAT+TGG + chr1.2:54761290-54761309 MS.gene50543:CDS 45.0%
TTCCTTGGTGGAAAAGGAGT+TGG + chr1.2:54766022-54766041 MS.gene50543:CDS 45.0%
TTGGAGGATGAAAAGGAAGC+TGG + chr1.2:54761783-54761802 MS.gene50543:CDS 45.0%
TTTCAAGGAAAGCCACCACT+TGG + chr1.2:54764068-54764087 MS.gene50543:CDS 45.0%
TTTCATTGATCCTCCTCTGC+AGG - chr1.2:54765665-54765684 None:intergenic 45.0%
! AAAGTCGGAGAGTACGTTTG+CGG + chr1.2:54766519-54766538 MS.gene50543:CDS 45.0%
! AGTTGAGTGCCAGAGACTTT+TGG + chr1.2:54763804-54763823 MS.gene50543:CDS 45.0%
! ATGCTCTTCAAGTTTCCCCT+TGG - chr1.2:54764868-54764887 None:intergenic 45.0%
! CTCTTGTTGTCTTCTTCACG+TGG - chr1.2:54766086-54766105 None:intergenic 45.0%
! GGAAACCATGGAGAAGCTTT+TGG + chr1.2:54763099-54763118 MS.gene50543:CDS 45.0%
! TCTTTTGCTCAGAAGGATGC+AGG + chr1.2:54762029-54762048 MS.gene50543:CDS 45.0%
!! ATGAGATTGGAAGTGTCAGC+AGG + chr1.2:54766360-54766379 MS.gene50543:CDS 45.0%
!! ATTTTGACGGTCCTTGTCTG+AGG - chr1.2:54764913-54764932 None:intergenic 45.0%
!! TCGTCAAAGAAGAGCATCCA+AGG + chr1.2:54765971-54765990 MS.gene50543:CDS 45.0%
AACATGCCAGTCTCTGCTTG+TGG + chr1.2:54763207-54763226 MS.gene50543:CDS 50.0%
AAGCTATGATCGACGAGGTC+AGG + chr1.2:54762954-54762973 MS.gene50543:CDS 50.0%
ACAGAAGATTGCGGCAGAAC+CGG + chr1.2:54765938-54765957 MS.gene50543:CDS 50.0%
ACTCTCTTGTGCTGAAGAGG+AGG + chr1.2:54762361-54762380 MS.gene50543:CDS 50.0%
AGACATGAGCCTTAGTGCCA+CGG - chr1.2:54761695-54761714 None:intergenic 50.0%
AGATTCCTTTGCCAGGAGAG+CGG + chr1.2:54761218-54761237 MS.gene50543:CDS 50.0%
AGCAAAGAGTTCTGCAGCCT+GGG - chr1.2:54765084-54765103 None:intergenic 50.0%
ATGTGTAAGGCCACCCACTA+AGG + chr1.2:54766604-54766623 MS.gene50543:CDS 50.0%
ATTCTTCACCAGCTTGCGGT+TGG - chr1.2:54766291-54766310 None:intergenic 50.0%
CATATCTCTCGGCCAATGCA+CGG - chr1.2:54761305-54761324 None:intergenic 50.0%
CCACCCTTCACGTACATTTC+TGG + chr1.2:54761461-54761480 MS.gene50543:CDS 50.0%
CCAGAAATGTACGTGAAGGG+TGG - chr1.2:54761464-54761483 None:intergenic 50.0%
CCTCCTCGTATTCTTGTTCC+AGG - chr1.2:54763696-54763715 None:intergenic 50.0%
CCTGGAACAAGAATACGAGG+AGG + chr1.2:54763693-54763712 MS.gene50543:CDS 50.0%
CCTTGGTGGAAAAGGAGTTG+GGG + chr1.2:54766024-54766043 MS.gene50543:CDS 50.0%
CTCGGTCTCATGCAGATTCT+AGG + chr1.2:54760268-54760287 MS.gene50543:CDS 50.0%
CTCTGCAATGCTCTTCCCTT+TGG - chr1.2:54763600-54763619 None:intergenic 50.0%
CTTGGTGGAAAAGGAGTTGG+GGG + chr1.2:54766025-54766044 MS.gene50543:CDS 50.0%
CTTTGACGACGATCTTCTGC+CGG - chr1.2:54765960-54765979 None:intergenic 50.0%
GAAAGCCCTTGCCAAATTGG+AGG + chr1.2:54761767-54761786 MS.gene50543:CDS 50.0%
GAGTGAGGAGAAGGGTAACT+TGG + chr1.2:54764425-54764444 MS.gene50543:CDS 50.0%
GAGTGATCCGTCATGCTCAT+CGG + chr1.2:54761337-54761356 MS.gene50543:CDS 50.0%
GCGCCCAGAGCTTATGAAAA+TGG + chr1.2:54761257-54761276 MS.gene50543:CDS 50.0%
GGTCCTTGTCTGAGGACAAT+TGG - chr1.2:54764905-54764924 None:intergenic 50.0%
GTGCCTGGAACAAGAATACG+AGG + chr1.2:54763690-54763709 MS.gene50543:CDS 50.0%
TCATATGGAGTAAGCAGGGG+AGG + chr1.2:54765861-54765880 MS.gene50543:CDS 50.0%
TCCACCAAGGAATCTCCTGA+AGG - chr1.2:54766014-54766033 None:intergenic 50.0%
TCCTTCAGGAGATTCCTTGG+TGG + chr1.2:54766010-54766029 MS.gene50543:CDS 50.0%
TCTCTGGCACTCAACTAGGA+GGG - chr1.2:54763800-54763819 None:intergenic 50.0%
TGGATGCCTCCAAAAGTCTC+TGG - chr1.2:54763816-54763835 None:intergenic 50.0%
TGTCAGCAGGAGGAGAGTTT+CGG + chr1.2:54766373-54766392 MS.gene50543:CDS 50.0%
TGTGTAAGGCCACCCACTAA+GGG + chr1.2:54766605-54766624 MS.gene50543:CDS 50.0%
TTGCATGTTCTCGAGGGATG+AGG - chr1.2:54761596-54761615 None:intergenic 50.0%
! AAGTCGGAGAGTACGTTTGC+GGG + chr1.2:54766520-54766539 MS.gene50543:CDS 50.0%
! AGAGCAGTTTGAAGCGTCTC+AGG + chr1.2:54766241-54766260 MS.gene50543:CDS 50.0%
! AGTTTGAAGGGCATGCTCGA+AGG + chr1.2:54761616-54761635 MS.gene50543:CDS 50.0%
! CCGACTTTGATCGGCCATTT+TGG - chr1.2:54766507-54766526 None:intergenic 50.0%
! GCTGAGTTGGATAGTGTCAG+AGG + chr1.2:54763163-54763182 MS.gene50543:CDS 50.0%
! GTTTGAAGGGCATGCTCGAA+GGG + chr1.2:54761617-54761636 MS.gene50543:CDS 50.0%
! TCCACAGTGCTTTGGCTCAT+CGG + chr1.2:54762991-54763010 MS.gene50543:CDS 50.0%
! TCTCTGGAGATGCAGACTCT+TGG + chr1.2:54765323-54765342 MS.gene50543:CDS 50.0%
! TGAGTGCCAGAGACTTTTGG+AGG + chr1.2:54763807-54763826 MS.gene50543:CDS 50.0%
! TTTGAAGGGCATGCTCGAAG+GGG + chr1.2:54761618-54761637 MS.gene50543:CDS 50.0%
!! AGATTGGAAGTGTCAGCAGG+AGG + chr1.2:54766363-54766382 MS.gene50543:CDS 50.0%
!! GCCTCCTATCTTTCTGGCTT+TGG + chr1.2:54760369-54760388 MS.gene50543:intron 50.0%
ACTAAGGGTTGGGCTGCATC+AGG + chr1.2:54763924-54763943 MS.gene50543:CDS 55.0%
ACTTCCAAGACCTGCAGAGG+AGG + chr1.2:54765652-54765671 MS.gene50543:CDS 55.0%
AGGGTGCACTGTCTTCAGCT+GGG + chr1.2:54766318-54766337 MS.gene50543:CDS 55.0%
AGGTCTTGGAAGTCGAGGAG+AGG - chr1.2:54765645-54765664 None:intergenic 55.0%
AGTCAGCGGCAAGAGCTCTA+AGG - chr1.2:54762658-54762677 None:intergenic 55.0%
CAGCAAAGAGTTCTGCAGCC+TGG - chr1.2:54765085-54765104 None:intergenic 55.0%
CATTTCCGCTCTCCTGGCAA+AGG - chr1.2:54761226-54761245 None:intergenic 55.0%
CCATGGTCCGATGAGCATGA+CGG - chr1.2:54761347-54761366 None:intergenic 55.0%
GAACGAATGTCTCGTGGGAC+AGG - chr1.2:54764467-54764486 None:intergenic 55.0%
GAGAACTTGACGAGGAGTCC+AGG + chr1.2:54764166-54764185 MS.gene50543:CDS 55.0%
GAGCTAAACAATGGAGGCCG+TGG + chr1.2:54761675-54761694 MS.gene50543:CDS 55.0%
GTCTCTGGCACTCAACTAGG+AGG - chr1.2:54763801-54763820 None:intergenic 55.0%
GTTTCGGAACAAGCGCAGAG+AGG + chr1.2:54766389-54766408 MS.gene50543:CDS 55.0%
TCGACTTCCAAGACCTGCAG+AGG + chr1.2:54765649-54765668 MS.gene50543:CDS 55.0%
TCTGCAGGTCTTGGAAGTCG+AGG - chr1.2:54765650-54765669 None:intergenic 55.0%
TGATCCTCCTCTGCAGGTCT+TGG - chr1.2:54765659-54765678 None:intergenic 55.0%
TGGAAGTCGAGGAGAGGATC+TGG - chr1.2:54765639-54765658 None:intergenic 55.0%
! AGTACGTGGCTCTGTCTCCA+TGG - chr1.2:54761430-54761449 None:intergenic 55.0%
! CCCCAACTCCTTTTCCACCA+AGG - chr1.2:54766027-54766046 None:intergenic 55.0%
! TTGAAGGGCATGCTCGAAGG+GGG + chr1.2:54761619-54761638 MS.gene50543:CDS 55.0%
!! ACCGATGAGCCAAAGCACTG+TGG - chr1.2:54762995-54763014 None:intergenic 55.0%
!! TGGCGTGTTTCTGGAGTACG+TGG - chr1.2:54761444-54761463 None:intergenic 55.0%
CAATGGAGGCCGTGGCACTA+AGG + chr1.2:54761683-54761702 MS.gene50543:CDS 60.0%
CCGTCATGCTCATCGGACCA+TGG + chr1.2:54761344-54761363 MS.gene50543:CDS 60.0%
CGTGAAGGGTGGCGTGTTTC+TGG - chr1.2:54761453-54761472 None:intergenic 60.0%
GGTGGAAAAGGAGTTGGGGG+TGG + chr1.2:54766028-54766047 MS.gene50543:CDS 60.0%
GTTCGATGCCAACCGCAAGC+TGG + chr1.2:54766280-54766299 MS.gene50543:CDS 60.0%
! GAGGGTGCACTGTCTTCAGC+TGG + chr1.2:54766317-54766336 MS.gene50543:CDS 60.0%
! GTGCTGAAGAGGAGGTGCGT+AGG + chr1.2:54762369-54762388 MS.gene50543:CDS 60.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 54760255 54766634 54760255 ID=MS.gene50543
chr1.2 mRNA 54760255 54766634 54760255 ID=MS.gene50543.t1;Parent=MS.gene50543
chr1.2 exon 54760255 54760363 54760255 ID=MS.gene50543.t1.exon1;Parent=MS.gene50543.t1
chr1.2 CDS 54760255 54760363 54760255 ID=cds.MS.gene50543.t1;Parent=MS.gene50543.t1
chr1.2 exon 54761169 54765379 54761169 ID=MS.gene50543.t1.exon2;Parent=MS.gene50543.t1
chr1.2 CDS 54761169 54765379 54761169 ID=cds.MS.gene50543.t1;Parent=MS.gene50543.t1
chr1.2 exon 54765564 54766634 54765564 ID=MS.gene50543.t1.exon3;Parent=MS.gene50543.t1
chr1.2 CDS 54765564 54766634 54765564 ID=cds.MS.gene50543.t1;Parent=MS.gene50543.t1
Gene Sequence

>MS.gene50543

ATGGCGACGGCGACTCGGTCTCATGCAGATTCTAGGAGAATGTATTCTTGGTGGTGGGATAGCCACATAAGTCCCAAGAACTCAAAATGGCTCCAAGAAAATCTTACAGGTAATGCCTCCTATCTTTCTGGCTTTGGTAGTAGCTTTGTTTAACATATGAAAACAGTTATTTTTCGTGACTTGACACATTCTTGGTTTGAGGTTGAGTTGCATCATGTATTGTTGTTTTCTTATCCGTAGTATAGGACAAATTAATGTTTTTACATTAAACTTCAAAGGAAGTTTAATTTTGAAGTTTAATTGAGCATAATTTATTTTGTTGATGGGTTTAGTAGTTACCGAGATTGCTATGATACCTTAAAAGTTATTGTGTGGAAGTATTATATTTTTGCTAAAAGATTTTAGAGTATTCGAATGGACAATAGAAGTATATTTCATCAATGTCTGGCTGGCACAATGATGTAATATGATTTAAATCTGTTTCAGTTTCACTTTGGAATGTTCTTCTGGTTATAGGAAACACTCAAGCTGAGACTTTATTAAGCTGTTATATGGACTTTTATAGAAGCATTTTTTTCAAAACTACCGGGTGTTTTTTTTTTTTACGTATATTTCTGAATCATCGTTATTTTGTATCTTTGTTCAAAATTCTTTTCCTTTTATAACTATAGATGTTGAAGCGTGTGGTGACATGATTTATTTGGTTTTAGAAAATTTCAGCTGTTTCCTTCAGGGACATTCTACATGCACTTCTAGTTTGTATTTCAGCTGTTTCCTTCAGGGACATTCTACATGCACTTCTAGTTTGTATTATATGAGTTGTTGGCTTAATTACCGAGAAAGATATGACGATATTTATTTTTTATGATAATCCATCCTCTGAACTTATCTCAATGATATCTCGTGATGCACAGATATGGACGTCAAGGTGAAGCAAATGATTAAGCTCATTGAAGAAGATGCAGATTCCTTTGCCAGGAGAGCGGAAATGTACTATAAAAAGCGCCCAGAGCTTATGAAAATGGTTGAAGAGTTTTATAGGGCATACCGTGCATTGGCCGAGAGATATGATCATGCAACTGGAGTGATCCGTCATGCTCATCGGACCATGGCTGAAGCATTTCCTAATCAAATTCCTGTGATGATTACAGACGATTTACCAATGGTTACTTCCATGGAGACAGAGCCACGTACTCCAGAAACACGCCACCCTTCACGTACATTTCTGGACTCTGATGAATCAGAAAAAGATGCTCATTTTATGAAAAGAAATGGAGCAGATAGTGAAGAACCGAATTCTGCTTTGAACAAGACAGGTTTAAGACAACTCAATGATCTCCTCATCCCTCGAGAACATGCAAAGTTTGAAGGGCATGCTCGAAGGGGGCTCAATTTTTTAGAGACGCAGGAGGAGAATAGTGAGCTAAACAATGGAGGCCGTGGCACTAAGGCTCATGTCTTGTCTGAGTCTGAACGCGTGACAAAAGCCGAAGCAGAAATTTCGGCCTTAAAGAAAGCCCTTGCCAAATTGGAGGATGAAAAGGAAGCTGGTTTGCTTCAGTATCAGCAGAGTTTGGAGAAATTGTCTAATCTTGAATTAGAAGTGTCTTCTGCACAAGAGAATTATCAAAGAGTCGATGGACGAGCAAGCAAAGCAGAAGCTGAAGTTCAAGACTTGAAGGAAGCGGTAATCAAAATACAGGCGGAAAGGGAAGCTACTCTTCTTCAGTACCAGGAATGCTTGGAGAAAATAACAGATCTGGAGAAAAATATTTCTTTTGCTCAGAAGGATGCAGGAGAGTTCAACGAACGTGCTACTAGAGCTGAAATTGAAGTTGAGTCTTTGAAGCAGGACCTTGTTCGAGTAGAATCTGAAAAGGAAGCTGCCCTTGTTCAATATAAACAATGCTTGGAGACATTATCAAAACTGGAGGAGAGATTAAAAGAATCCGAGGAGAAAGTTAGAAGGATTAATGAGCAAGCTAATTTAGCTGAAAATGAAATCGAAGCTTTGAAGTTGGAAGTTACTAAACTTAATGAAGAGAAGGAAGATGCTGCTCTTCAATATCAGCAATGCTTGGAGATAATTTCCAGTCTGGAACATAAACTCTCTTGTGCTGAAGAGGAGGTGCGTAGGTTAAATTCTAAGATAGACGATGAGGTTGAAAAGTTACATAGTTCTGAACAGAAGTGTCTTCTTTTGGAAACATCAAATCACACTCTACAGTCTGAATTACAGTCTTTGGCACACAAGATGGGATCTCAAAGTGAAGAACTTAACGAGAAGCAGAAAGAATTGGGTAAACTTTGGAGTTCCTTACAAGAGGAGAGATTGCGATTCATTGAGGCTGAAACTGCTTTCCAAACTCTTCAACATTTGCATTCTCAATCTCAGGAAGACCTTAGAGCTCTTGCCGCTGACTTTCACAATAAAGTGGAAATCCTAGGGAATGTCGAATCACATAAGCAGTCTCTAGAAGATGAAATGCACCGTGTCAATGAGGAAAACAAAATTCTAAATGAGCTCAAGATTTCTTCATCTTTGTCCATACACACTTTGCAGGATGAGATATTGAATTTGAAAGAGACAATAGAGAAACTTGAACAGGAGGTTGAGCTGCGACTTAATGAAAGAAATGCTCTTCAGCAAGAAATTTACTGTCTTAAAGAGGAGCTTAATGATATGAATAAAAAACATGAAGCTATGATCGACGAGGTCAGGTCAGCTGATTTAGATCCACAGTGCTTTGGCTCATCGGTGAAACAATTGCAAGACGAGAACTCAAAGCTGAAGGAGACATGTGAGGCTGAAAAAGATGAGAAACTGGCTCTTTTGGTAAAATTGGAAACCATGGAGAAGCTTTTGGAGAAGAATTCTGTTTTAGAGAATTCCATTTCAGACTTGAATGCTGAGTTGGATAGTGTCAGAGGAAAAGTAAATGTGTTGGAAGGAACATGCCAGTCTCTGCTTGTGGAGAAATCAACTCTTGCTGCTGAGAAGGCCACCTTGTTTTCCCAATTACAAGCCACAACTGAAAAGCTTGAGAAGCTCTCGGAAAATAACAACCTTTTGGAAAATTCACTATTTGATGTCAGTACCGAACTTGATGTACTAAGAGGGAAGTCAAAGATCTTAGAAGACGCGTGCCAGTCACTTGACCATGAAAAGTCCAGTATCTTTTCAGAGAAAGAAGCCTTAGTTTCAGAGTTGAACACCACTCAGCAAATTCTGAAAGATCTTGAAAAGCAACACAGTGAATTGGAACTAATGCATTTGGAACTAAAAGGAGAAAGGGAGTCGTCACTTAAAAAGGTAGAAGAGCTACTGGTTTCTCTATATTCCCAAAGGGAAGAGCATTGCAGAGTCTTGAAGTTGAATGAAGATGAAGTGGCCAACAAGGAATTACAAATTGATATTCTGAAAGAAAATGCAAAGTGCCTGGAACAAGAATACGAGGAGGAACTGGATAGATCTCTAAATGCTCAGATTGAAATTTTCATCTTGCAGAAGTGTATCCAAGATTTGGAGAAAAGGAACTTTTCCCTCCTAGTTGAGTGCCAGAGACTTTTGGAGGCATCCAAAATGTCTGACAAAATTATTTCTAAATTGGAGACTGAAAATATTCAAAAGCAAGATGATGTGGATTCTTTGTCTGAGAAAATTAAAATACTAAGGGTTGGGCTGCATCAGGTGTTGAAGACTCTTGACATTCACGGCGAGAATTTCTTTGAAGATATGCTTGACGAAGACCGAACTCTCCTGAACCATATACATGGAAAACTTAAGGAGAGAAAGAAGTCTTTTGACACGATTTTCAAGGAAAGCCACCACTTGGCCATTGAGAATTCAGTTCTGATTACATTTCTTGAGCAGTTGAAACTGACTGTAGAAAATCTTGTGATAGAAAAACGAGAACTTGACGAGGAGTCCAGGATACAGTCTAAGCAGTTCACGGCATTGCAAATAGAGTTCCAAAAGGTATTGGAAAAGAATCAGGAGTTGAAGTTGGCAATAAGCAAAGGAGAAGAGAGAATGGAAGCTATGACAACAGAAATAGTTAATCTACGCAAAGAGCTATCAAACTTTGAAAAGAGCCACAACAACTTACAGGAAAAAAGTTGCACGATACTTGAAGAGAAAAACTCCTTGATGGGAAGATTTGAAGATCTGAGTGAGGAGAAGGGTAACTTGGAAGAAGAACTTTGTGTCCTGTCCCACGAGACATTCGTTCAATCTAATATTTCTTCGATTTACCAGAATATTATCTCTGAAAAACTCCAGGAACTTAAACAGCTTGGTCAAGAACTTGATAAGCTCGGTTCAGAAAATAATAACCTGGAGGACAGATTGAAGATAATGGCACACAAATTAGAAAGTGAAGAAATGGAAAATTCTCATCTTAAAGAGTTATTTGTGAAGTCAAATGTTGAATTGAATTTAGTTGAATCTATCAATGATCAATTGACTTGTCAGATTAGGAATGAAAGGGACATGTTGTGTCAAAAGGAAAAAGTGCTTTCGGAAGCAGCCAAGACGTTTCATGCTTTACACACCGAGAAAACAGAATTGCAAAGAACGGCGGAAGATCTGAAGATTAGATATGATGATGCCAAGGGGAAACTTGAAGAGCATGCTAATCAAATTTTCCAATTGTCCTCAGACAAGGACCGTCAAAATGAAGAGCTTGGATGCCTAAGTGAAGTGAACCAGAAATTGGAGTCTGAAATGAAGTTCCTACACCAAGAACTTGAAGAAACTAAGCTAAGGGAAAAGAAGCTAAGTTATGAAGTACATGAAGGAATAAATGAGATTGAACAATGGGAAACCCAGGCTGCAGAACTCTTTGCTGAACTGCAGGTTTCTGCTGTCAATGAAACACTGCTTCAAGGGAAGGCCTTTGAGCTAGCTGATACATGTGAGCATCTTGAGAGCATAAACTACTCGAAAGACATGGAAAGAGAACAGCTGAAAGAATTAGTTAGCAAGTTGGAAGGTGAAAATGGGAAAATGTGTGATCAATTAGCTGCGTATGTCCCAGCTATCAGTGCTTTGAATGATTGTGTTACATCTCTGGAGATGCAGACTCTTGGAAATGCAAAACATCATGACTATGAAAAACCAGAGGTATTGACATATTGTTTCAGTATTTGGTTGTGACTTTTTCTTTTAATGTAATGCCAGGTCATTTATTGATGATTTTGTGACGAAAGGGAAATTAATTTCCTCCTTTTCTACTTGTAACCAACTATTATTTCCTTTCTTTATGCATATAATTTGATTTTATTTGTTCTATAATCACCATTTCCAGGTTAAAAATTTGGTGAATCACCAATACAATGAAAATGGTCAACAAGTAGATGAAGATCAATCTGTTACGGCACCAGATCCTCTCCTCGACTTCCAAGACCTGCAGAGGAGGATCAATGAAATTTCAATGGCAGTTAAGAATTTTAACGCAAGTTCCAAAGCCAATGTTGAAATGAGAGAGATTCAAGAAGCAAAGGAGATTGAACAGAAAATGGGGAGTTTAAGGCCAGATAATCCTGTAACTGAGATTGAAGTGCTTCCAAAAGACATCATGCTTGATCAAATATCTGAATGTTCATCATATGGAGTAAGCAGGGGAGGAACTCTTGAGTCTGATGATCATATGCTTGAGTTGTGGGAAACTTCTGATAAGACACAGAAGATTGCGGCAGAACCGGCAGAAGATCGTCGTCAAAGAAGAGCATCCAAGGAAACATACAACAAACATCCTTCAGGAGATTCCTTGGTGGAAAAGGAGTTGGGGGTGGACAAGTTAGAGATCTCAAGAAGAATGTCACGGCCACGTGAAGAAGACAACAAGAGTAGGGTTTTGGAAAGACTTGATTCTGATGCACAGAAGTTAACGAACCTTCAAATAACCATACAAGATTTGATGAAGAAAGTGGAAACTATTGAGAAGAGTACAAAGGGAAAAAGTGCCGAGTATGATACCGTTAAAGAGCAGTTTGAAGCGTCTCAGGAGACTGTAATGAAGTTGTTCGATGCCAACCGCAAGCTGGTGAAGAATGTAGAAGAGGGTGCACTGTCTTCAGCTGGGAGAGCTTCATCAGAATCAGATGAGATTGGAAGTGTCAGCAGGAGGAGAGTTTCGGAACAAGCGCAGAGAGGATCAGAAAAAATAGGACAACTTCAGTTGGAGGTTCAAAGACTTCAGTTTCTTCTTTTGAAACTCAATGATGCAAAAGAAAGCAAAGAGAAAACCAAAATGGCCGATCAAAGTCGGAGAGTACGTTTGCGGGATTATCTCTATGGTGCGACAAAAACCAACAACCAAAAGAAGAAGAAAACACCTTTTTGTGCATGTGTAAGGCCACCCACTAAGGGTGATTGA
Protein sequence

>MS.gene50543.t1

MATATRSHADSRRMYSWWWDSHISPKNSKWLQENLTDMDVKVKQMIKLIEEDADSFARRAEMYYKKRPELMKMVEEFYRAYRALAERYDHATGVIRHAHRTMAEAFPNQIPVMITDDLPMVTSMETEPRTPETRHPSRTFLDSDESEKDAHFMKRNGADSEEPNSALNKTGLRQLNDLLIPREHAKFEGHARRGLNFLETQEENSELNNGGRGTKAHVLSESERVTKAEAEISALKKALAKLEDEKEAGLLQYQQSLEKLSNLELEVSSAQENYQRVDGRASKAEAEVQDLKEAVIKIQAEREATLLQYQECLEKITDLEKNISFAQKDAGEFNERATRAEIEVESLKQDLVRVESEKEAALVQYKQCLETLSKLEERLKESEEKVRRINEQANLAENEIEALKLEVTKLNEEKEDAALQYQQCLEIISSLEHKLSCAEEEVRRLNSKIDDEVEKLHSSEQKCLLLETSNHTLQSELQSLAHKMGSQSEELNEKQKELGKLWSSLQEERLRFIEAETAFQTLQHLHSQSQEDLRALAADFHNKVEILGNVESHKQSLEDEMHRVNEENKILNELKISSSLSIHTLQDEILNLKETIEKLEQEVELRLNERNALQQEIYCLKEELNDMNKKHEAMIDEVRSADLDPQCFGSSVKQLQDENSKLKETCEAEKDEKLALLVKLETMEKLLEKNSVLENSISDLNAELDSVRGKVNVLEGTCQSLLVEKSTLAAEKATLFSQLQATTEKLEKLSENNNLLENSLFDVSTELDVLRGKSKILEDACQSLDHEKSSIFSEKEALVSELNTTQQILKDLEKQHSELELMHLELKGERESSLKKVEELLVSLYSQREEHCRVLKLNEDEVANKELQIDILKENAKCLEQEYEEELDRSLNAQIEIFILQKCIQDLEKRNFSLLVECQRLLEASKMSDKIISKLETENIQKQDDVDSLSEKIKILRVGLHQVLKTLDIHGENFFEDMLDEDRTLLNHIHGKLKERKKSFDTIFKESHHLAIENSVLITFLEQLKLTVENLVIEKRELDEESRIQSKQFTALQIEFQKVLEKNQELKLAISKGEERMEAMTTEIVNLRKELSNFEKSHNNLQEKSCTILEEKNSLMGRFEDLSEEKGNLEEELCVLSHETFVQSNISSIYQNIISEKLQELKQLGQELDKLGSENNNLEDRLKIMAHKLESEEMENSHLKELFVKSNVELNLVESINDQLTCQIRNERDMLCQKEKVLSEAAKTFHALHTEKTELQRTAEDLKIRYDDAKGKLEEHANQIFQLSSDKDRQNEELGCLSEVNQKLESEMKFLHQELEETKLREKKLSYEVHEGINEIEQWETQAAELFAELQVSAVNETLLQGKAFELADTCEHLESINYSKDMEREQLKELVSKLEGENGKMCDQLAAYVPAISALNDCVTSLEMQTLGNAKHHDYEKPEVKNLVNHQYNENGQQVDEDQSVTAPDPLLDFQDLQRRINEISMAVKNFNASSKANVEMREIQEAKEIEQKMGSLRPDNPVTEIEVLPKDIMLDQISECSSYGVSRGGTLESDDHMLELWETSDKTQKIAAEPAEDRRQRRASKETYNKHPSGDSLVEKELGVDKLEISRRMSRPREEDNKSRVLERLDSDAQKLTNLQITIQDLMKKVETIEKSTKGKSAEYDTVKEQFEASQETVMKLFDANRKLVKNVEEGALSSAGRASSESDEIGSVSRRRVSEQAQRGSEKIGQLQLEVQRLQFLLLKLNDAKESKEKTKMADQSRRVRLRDYLYGATKTNNQKKKKTPFCACVRPPTKGD