AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene50543


Find 334 sgRNAs with CRISPR-Local

Find 426 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-GE



Chromosome Type Strat End Strand Name
chr1.2 gene 54760255 54766634 54760255 ID=MS.gene50543
chr1.2 mRNA 54760255 54766634 54760255 ID=MS.gene50543.t1;Parent=MS.gene50543
chr1.2 exon 54760255 54760363 54760255 ID=MS.gene50543.t1.exon1;Parent=MS.gene50543.t1
chr1.2 CDS 54760255 54760363 54760255 ID=cds.MS.gene50543.t1;Parent=MS.gene50543.t1
chr1.2 exon 54761169 54765379 54761169 ID=MS.gene50543.t1.exon2;Parent=MS.gene50543.t1
chr1.2 CDS 54761169 54765379 54761169 ID=cds.MS.gene50543.t1;Parent=MS.gene50543.t1
chr1.2 exon 54765564 54766634 54765564 ID=MS.gene50543.t1.exon3;Parent=MS.gene50543.t1
chr1.2 CDS 54765564 54766634 54765564 ID=cds.MS.gene50543.t1;Parent=MS.gene50543.t1
Gene Sequence

>MS.gene50543

ATGGCGACGGCGACTCGGTCTCATGCAGATTCTAGGAGAATGTATTCTTGGTGGTGGGATAGCCACATAAGTCCCAAGAACTCAAAATGGCTCCAAGAAAATCTTACAGGTAATGCCTCCTATCTTTCTGGCTTTGGTAGTAGCTTTGTTTAACATATGAAAACAGTTATTTTTCGTGACTTGACACATTCTTGGTTTGAGGTTGAGTTGCATCATGTATTGTTGTTTTCTTATCCGTAGTATAGGACAAATTAATGTTTTTACATTAAACTTCAAAGGAAGTTTAATTTTGAAGTTTAATTGAGCATAATTTATTTTGTTGATGGGTTTAGTAGTTACCGAGATTGCTATGATACCTTAAAAGTTATTGTGTGGAAGTATTATATTTTTGCTAAAAGATTTTAGAGTATTCGAATGGACAATAGAAGTATATTTCATCAATGTCTGGCTGGCACAATGATGTAATATGATTTAAATCTGTTTCAGTTTCACTTTGGAATGTTCTTCTGGTTATAGGAAACACTCAAGCTGAGACTTTATTAAGCTGTTATATGGACTTTTATAGAAGCATTTTTTTCAAAACTACCGGGTGTTTTTTTTTTTTACGTATATTTCTGAATCATCGTTATTTTGTATCTTTGTTCAAAATTCTTTTCCTTTTATAACTATAGATGTTGAAGCGTGTGGTGACATGATTTATTTGGTTTTAGAAAATTTCAGCTGTTTCCTTCAGGGACATTCTACATGCACTTCTAGTTTGTATTTCAGCTGTTTCCTTCAGGGACATTCTACATGCACTTCTAGTTTGTATTATATGAGTTGTTGGCTTAATTACCGAGAAAGATATGACGATATTTATTTTTTATGATAATCCATCCTCTGAACTTATCTCAATGATATCTCGTGATGCACAGATATGGACGTCAAGGTGAAGCAAATGATTAAGCTCATTGAAGAAGATGCAGATTCCTTTGCCAGGAGAGCGGAAATGTACTATAAAAAGCGCCCAGAGCTTATGAAAATGGTTGAAGAGTTTTATAGGGCATACCGTGCATTGGCCGAGAGATATGATCATGCAACTGGAGTGATCCGTCATGCTCATCGGACCATGGCTGAAGCATTTCCTAATCAAATTCCTGTGATGATTACAGACGATTTACCAATGGTTACTTCCATGGAGACAGAGCCACGTACTCCAGAAACACGCCACCCTTCACGTACATTTCTGGACTCTGATGAATCAGAAAAAGATGCTCATTTTATGAAAAGAAATGGAGCAGATAGTGAAGAACCGAATTCTGCTTTGAACAAGACAGGTTTAAGACAACTCAATGATCTCCTCATCCCTCGAGAACATGCAAAGTTTGAAGGGCATGCTCGAAGGGGGCTCAATTTTTTAGAGACGCAGGAGGAGAATAGTGAGCTAAACAATGGAGGCCGTGGCACTAAGGCTCATGTCTTGTCTGAGTCTGAACGCGTGACAAAAGCCGAAGCAGAAATTTCGGCCTTAAAGAAAGCCCTTGCCAAATTGGAGGATGAAAAGGAAGCTGGTTTGCTTCAGTATCAGCAGAGTTTGGAGAAATTGTCTAATCTTGAATTAGAAGTGTCTTCTGCACAAGAGAATTATCAAAGAGTCGATGGACGAGCAAGCAAAGCAGAAGCTGAAGTTCAAGACTTGAAGGAAGCGGTAATCAAAATACAGGCGGAAAGGGAAGCTACTCTTCTTCAGTACCAGGAATGCTTGGAGAAAATAACAGATCTGGAGAAAAATATTTCTTTTGCTCAGAAGGATGCAGGAGAGTTCAACGAACGTGCTACTAGAGCTGAAATTGAAGTTGAGTCTTTGAAGCAGGACCTTGTTCGAGTAGAATCTGAAAAGGAAGCTGCCCTTGTTCAATATAAACAATGCTTGGAGACATTATCAAAACTGGAGGAGAGATTAAAAGAATCCGAGGAGAAAGTTAGAAGGATTAATGAGCAAGCTAATTTAGCTGAAAATGAAATCGAAGCTTTGAAGTTGGAAGTTACTAAACTTAATGAAGAGAAGGAAGATGCTGCTCTTCAATATCAGCAATGCTTGGAGATAATTTCCAGTCTGGAACATAAACTCTCTTGTGCTGAAGAGGAGGTGCGTAGGTTAAATTCTAAGATAGACGATGAGGTTGAAAAGTTACATAGTTCTGAACAGAAGTGTCTTCTTTTGGAAACATCAAATCACACTCTACAGTCTGAATTACAGTCTTTGGCACACAAGATGGGATCTCAAAGTGAAGAACTTAACGAGAAGCAGAAAGAATTGGGTAAACTTTGGAGTTCCTTACAAGAGGAGAGATTGCGATTCATTGAGGCTGAAACTGCTTTCCAAACTCTTCAACATTTGCATTCTCAATCTCAGGAAGACCTTAGAGCTCTTGCCGCTGACTTTCACAATAAAGTGGAAATCCTAGGGAATGTCGAATCACATAAGCAGTCTCTAGAAGATGAAATGCACCGTGTCAATGAGGAAAACAAAATTCTAAATGAGCTCAAGATTTCTTCATCTTTGTCCATACACACTTTGCAGGATGAGATATTGAATTTGAAAGAGACAATAGAGAAACTTGAACAGGAGGTTGAGCTGCGACTTAATGAAAGAAATGCTCTTCAGCAAGAAATTTACTGTCTTAAAGAGGAGCTTAATGATATGAATAAAAAACATGAAGCTATGATCGACGAGGTCAGGTCAGCTGATTTAGATCCACAGTGCTTTGGCTCATCGGTGAAACAATTGCAAGACGAGAACTCAAAGCTGAAGGAGACATGTGAGGCTGAAAAAGATGAGAAACTGGCTCTTTTGGTAAAATTGGAAACCATGGAGAAGCTTTTGGAGAAGAATTCTGTTTTAGAGAATTCCATTTCAGACTTGAATGCTGAGTTGGATAGTGTCAGAGGAAAAGTAAATGTGTTGGAAGGAACATGCCAGTCTCTGCTTGTGGAGAAATCAACTCTTGCTGCTGAGAAGGCCACCTTGTTTTCCCAATTACAAGCCACAACTGAAAAGCTTGAGAAGCTCTCGGAAAATAACAACCTTTTGGAAAATTCACTATTTGATGTCAGTACCGAACTTGATGTACTAAGAGGGAAGTCAAAGATCTTAGAAGACGCGTGCCAGTCACTTGACCATGAAAAGTCCAGTATCTTTTCAGAGAAAGAAGCCTTAGTTTCAGAGTTGAACACCACTCAGCAAATTCTGAAAGATCTTGAAAAGCAACACAGTGAATTGGAACTAATGCATTTGGAACTAAAAGGAGAAAGGGAGTCGTCACTTAAAAAGGTAGAAGAGCTACTGGTTTCTCTATATTCCCAAAGGGAAGAGCATTGCAGAGTCTTGAAGTTGAATGAAGATGAAGTGGCCAACAAGGAATTACAAATTGATATTCTGAAAGAAAATGCAAAGTGCCTGGAACAAGAATACGAGGAGGAACTGGATAGATCTCTAAATGCTCAGATTGAAATTTTCATCTTGCAGAAGTGTATCCAAGATTTGGAGAAAAGGAACTTTTCCCTCCTAGTTGAGTGCCAGAGACTTTTGGAGGCATCCAAAATGTCTGACAAAATTATTTCTAAATTGGAGACTGAAAATATTCAAAAGCAAGATGATGTGGATTCTTTGTCTGAGAAAATTAAAATACTAAGGGTTGGGCTGCATCAGGTGTTGAAGACTCTTGACATTCACGGCGAGAATTTCTTTGAAGATATGCTTGACGAAGACCGAACTCTCCTGAACCATATACATGGAAAACTTAAGGAGAGAAAGAAGTCTTTTGACACGATTTTCAAGGAAAGCCACCACTTGGCCATTGAGAATTCAGTTCTGATTACATTTCTTGAGCAGTTGAAACTGACTGTAGAAAATCTTGTGATAGAAAAACGAGAACTTGACGAGGAGTCCAGGATACAGTCTAAGCAGTTCACGGCATTGCAAATAGAGTTCCAAAAGGTATTGGAAAAGAATCAGGAGTTGAAGTTGGCAATAAGCAAAGGAGAAGAGAGAATGGAAGCTATGACAACAGAAATAGTTAATCTACGCAAAGAGCTATCAAACTTTGAAAAGAGCCACAACAACTTACAGGAAAAAAGTTGCACGATACTTGAAGAGAAAAACTCCTTGATGGGAAGATTTGAAGATCTGAGTGAGGAGAAGGGTAACTTGGAAGAAGAACTTTGTGTCCTGTCCCACGAGACATTCGTTCAATCTAATATTTCTTCGATTTACCAGAATATTATCTCTGAAAAACTCCAGGAACTTAAACAGCTTGGTCAAGAACTTGATAAGCTCGGTTCAGAAAATAATAACCTGGAGGACAGATTGAAGATAATGGCACACAAATTAGAAAGTGAAGAAATGGAAAATTCTCATCTTAAAGAGTTATTTGTGAAGTCAAATGTTGAATTGAATTTAGTTGAATCTATCAATGATCAATTGACTTGTCAGATTAGGAATGAAAGGGACATGTTGTGTCAAAAGGAAAAAGTGCTTTCGGAAGCAGCCAAGACGTTTCATGCTTTACACACCGAGAAAACAGAATTGCAAAGAACGGCGGAAGATCTGAAGATTAGATATGATGATGCCAAGGGGAAACTTGAAGAGCATGCTAATCAAATTTTCCAATTGTCCTCAGACAAGGACCGTCAAAATGAAGAGCTTGGATGCCTAAGTGAAGTGAACCAGAAATTGGAGTCTGAAATGAAGTTCCTACACCAAGAACTTGAAGAAACTAAGCTAAGGGAAAAGAAGCTAAGTTATGAAGTACATGAAGGAATAAATGAGATTGAACAATGGGAAACCCAGGCTGCAGAACTCTTTGCTGAACTGCAGGTTTCTGCTGTCAATGAAACACTGCTTCAAGGGAAGGCCTTTGAGCTAGCTGATACATGTGAGCATCTTGAGAGCATAAACTACTCGAAAGACATGGAAAGAGAACAGCTGAAAGAATTAGTTAGCAAGTTGGAAGGTGAAAATGGGAAAATGTGTGATCAATTAGCTGCGTATGTCCCAGCTATCAGTGCTTTGAATGATTGTGTTACATCTCTGGAGATGCAGACTCTTGGAAATGCAAAACATCATGACTATGAAAAACCAGAGGTATTGACATATTGTTTCAGTATTTGGTTGTGACTTTTTCTTTTAATGTAATGCCAGGTCATTTATTGATGATTTTGTGACGAAAGGGAAATTAATTTCCTCCTTTTCTACTTGTAACCAACTATTATTTCCTTTCTTTATGCATATAATTTGATTTTATTTGTTCTATAATCACCATTTCCAGGTTAAAAATTTGGTGAATCACCAATACAATGAAAATGGTCAACAAGTAGATGAAGATCAATCTGTTACGGCACCAGATCCTCTCCTCGACTTCCAAGACCTGCAGAGGAGGATCAATGAAATTTCAATGGCAGTTAAGAATTTTAACGCAAGTTCCAAAGCCAATGTTGAAATGAGAGAGATTCAAGAAGCAAAGGAGATTGAACAGAAAATGGGGAGTTTAAGGCCAGATAATCCTGTAACTGAGATTGAAGTGCTTCCAAAAGACATCATGCTTGATCAAATATCTGAATGTTCATCATATGGAGTAAGCAGGGGAGGAACTCTTGAGTCTGATGATCATATGCTTGAGTTGTGGGAAACTTCTGATAAGACACAGAAGATTGCGGCAGAACCGGCAGAAGATCGTCGTCAAAGAAGAGCATCCAAGGAAACATACAACAAACATCCTTCAGGAGATTCCTTGGTGGAAAAGGAGTTGGGGGTGGACAAGTTAGAGATCTCAAGAAGAATGTCACGGCCACGTGAAGAAGACAACAAGAGTAGGGTTTTGGAAAGACTTGATTCTGATGCACAGAAGTTAACGAACCTTCAAATAACCATACAAGATTTGATGAAGAAAGTGGAAACTATTGAGAAGAGTACAAAGGGAAAAAGTGCCGAGTATGATACCGTTAAAGAGCAGTTTGAAGCGTCTCAGGAGACTGTAATGAAGTTGTTCGATGCCAACCGCAAGCTGGTGAAGAATGTAGAAGAGGGTGCACTGTCTTCAGCTGGGAGAGCTTCATCAGAATCAGATGAGATTGGAAGTGTCAGCAGGAGGAGAGTTTCGGAACAAGCGCAGAGAGGATCAGAAAAAATAGGACAACTTCAGTTGGAGGTTCAAAGACTTCAGTTTCTTCTTTTGAAACTCAATGATGCAAAAGAAAGCAAAGAGAAAACCAAAATGGCCGATCAAAGTCGGAGAGTACGTTTGCGGGATTATCTCTATGGTGCGACAAAAACCAACAACCAAAAGAAGAAGAAAACACCTTTTTGTGCATGTGTAAGGCCACCCACTAAGGGTGATTGA

Protein sequence

>MS.gene50543.t1

MATATRSHADSRRMYSWWWDSHISPKNSKWLQENLTDMDVKVKQMIKLIEEDADSFARRAEMYYKKRPELMKMVEEFYRAYRALAERYDHATGVIRHAHRTMAEAFPNQIPVMITDDLPMVTSMETEPRTPETRHPSRTFLDSDESEKDAHFMKRNGADSEEPNSALNKTGLRQLNDLLIPREHAKFEGHARRGLNFLETQEENSELNNGGRGTKAHVLSESERVTKAEAEISALKKALAKLEDEKEAGLLQYQQSLEKLSNLELEVSSAQENYQRVDGRASKAEAEVQDLKEAVIKIQAEREATLLQYQECLEKITDLEKNISFAQKDAGEFNERATRAEIEVESLKQDLVRVESEKEAALVQYKQCLETLSKLEERLKESEEKVRRINEQANLAENEIEALKLEVTKLNEEKEDAALQYQQCLEIISSLEHKLSCAEEEVRRLNSKIDDEVEKLHSSEQKCLLLETSNHTLQSELQSLAHKMGSQSEELNEKQKELGKLWSSLQEERLRFIEAETAFQTLQHLHSQSQEDLRALAADFHNKVEILGNVESHKQSLEDEMHRVNEENKILNELKISSSLSIHTLQDEILNLKETIEKLEQEVELRLNERNALQQEIYCLKEELNDMNKKHEAMIDEVRSADLDPQCFGSSVKQLQDENSKLKETCEAEKDEKLALLVKLETMEKLLEKNSVLENSISDLNAELDSVRGKVNVLEGTCQSLLVEKSTLAAEKATLFSQLQATTEKLEKLSENNNLLENSLFDVSTELDVLRGKSKILEDACQSLDHEKSSIFSEKEALVSELNTTQQILKDLEKQHSELELMHLELKGERESSLKKVEELLVSLYSQREEHCRVLKLNEDEVANKELQIDILKENAKCLEQEYEEELDRSLNAQIEIFILQKCIQDLEKRNFSLLVECQRLLEASKMSDKIISKLETENIQKQDDVDSLSEKIKILRVGLHQVLKTLDIHGENFFEDMLDEDRTLLNHIHGKLKERKKSFDTIFKESHHLAIENSVLITFLEQLKLTVENLVIEKRELDEESRIQSKQFTALQIEFQKVLEKNQELKLAISKGEERMEAMTTEIVNLRKELSNFEKSHNNLQEKSCTILEEKNSLMGRFEDLSEEKGNLEEELCVLSHETFVQSNISSIYQNIISEKLQELKQLGQELDKLGSENNNLEDRLKIMAHKLESEEMENSHLKELFVKSNVELNLVESINDQLTCQIRNERDMLCQKEKVLSEAAKTFHALHTEKTELQRTAEDLKIRYDDAKGKLEEHANQIFQLSSDKDRQNEELGCLSEVNQKLESEMKFLHQELEETKLREKKLSYEVHEGINEIEQWETQAAELFAELQVSAVNETLLQGKAFELADTCEHLESINYSKDMEREQLKELVSKLEGENGKMCDQLAAYVPAISALNDCVTSLEMQTLGNAKHHDYEKPEVKNLVNHQYNENGQQVDEDQSVTAPDPLLDFQDLQRRINEISMAVKNFNASSKANVEMREIQEAKEIEQKMGSLRPDNPVTEIEVLPKDIMLDQISECSSYGVSRGGTLESDDHMLELWETSDKTQKIAAEPAEDRRQRRASKETYNKHPSGDSLVEKELGVDKLEISRRMSRPREEDNKSRVLERLDSDAQKLTNLQITIQDLMKKVETIEKSTKGKSAEYDTVKEQFEASQETVMKLFDANRKLVKNVEEGALSSAGRASSESDEIGSVSRRRVSEQAQRGSEKIGQLQLEVQRLQFLLLKLNDAKESKEKTKMADQSRRVRLRDYLYGATKTNNQKKKKTPFCACVRPPTKGD