Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025561.t1 | RHN59934.1 | 97.3 | 371 | 9 | 1 | 1 | 370 | 69 | 439 | 6.10E-209 | 736.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025561.t1 | G7JUL4 | 97.3 | 371 | 9 | 1 | 1 | 370 | 1 | 371 | 4.4e-209 | 736.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene015971 | MS.gene025561 | PPI |
| MS.gene60267 | MS.gene025561 | PPI |
| MS.gene51556 | MS.gene025561 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025561.t1 | MTR_4g039720 | 97.305 | 371 | 9 | 1 | 1 | 370 | 1 | 371 | 0.0 | 741 |
| MS.gene025561.t1 | MTR_4g039740 | 92.916 | 367 | 26 | 0 | 4 | 370 | 1 | 367 | 0.0 | 710 |
| MS.gene025561.t1 | MTR_4g039680 | 89.373 | 367 | 39 | 0 | 4 | 370 | 1 | 367 | 0.0 | 687 |
| MS.gene025561.t1 | MTR_0045s0110 | 78.474 | 367 | 79 | 0 | 4 | 370 | 1 | 367 | 0.0 | 607 |
| MS.gene025561.t1 | MTR_1g011800 | 54.545 | 330 | 148 | 2 | 37 | 364 | 39 | 368 | 1.63e-130 | 379 |
| MS.gene025561.t1 | MTR_2g103170 | 49.102 | 334 | 164 | 2 | 37 | 364 | 28 | 361 | 6.12e-113 | 334 |
| MS.gene025561.t1 | MTR_2g019600 | 38.798 | 366 | 215 | 2 | 2 | 366 | 8 | 365 | 2.80e-93 | 284 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025561.t1 | AT3G08030 | 68.235 | 340 | 107 | 1 | 32 | 370 | 26 | 365 | 9.74e-178 | 498 |
| MS.gene025561.t1 | AT3G08030 | 69.659 | 323 | 97 | 1 | 49 | 370 | 1 | 323 | 4.98e-172 | 482 |
| MS.gene025561.t1 | AT2G41810 | 60.440 | 364 | 140 | 3 | 6 | 366 | 4 | 366 | 3.24e-158 | 449 |
| MS.gene025561.t1 | AT2G41800 | 62.952 | 332 | 122 | 1 | 37 | 367 | 36 | 367 | 3.51e-157 | 446 |
| MS.gene025561.t1 | AT5G25460 | 53.561 | 351 | 161 | 2 | 16 | 364 | 11 | 361 | 1.01e-134 | 389 |
| MS.gene025561.t1 | AT5G11420 | 55.319 | 329 | 146 | 1 | 37 | 364 | 30 | 358 | 3.48e-134 | 388 |
| MS.gene025561.t1 | AT4G32460 | 53.495 | 329 | 152 | 1 | 37 | 364 | 29 | 357 | 2.61e-131 | 380 |
| MS.gene025561.t1 | AT4G32460 | 53.495 | 329 | 152 | 1 | 37 | 364 | 29 | 357 | 2.61e-131 | 380 |
| MS.gene025561.t1 | AT4G32460 | 53.943 | 317 | 145 | 1 | 49 | 364 | 1 | 317 | 8.27e-129 | 372 |
| MS.gene025561.t1 | AT4G32460 | 53.943 | 317 | 145 | 1 | 49 | 364 | 1 | 317 | 8.27e-129 | 372 |
| MS.gene025561.t1 | AT1G80240 | 51.368 | 329 | 159 | 1 | 37 | 364 | 32 | 360 | 8.79e-118 | 346 |
| MS.gene025561.t1 | AT1G29980 | 40.882 | 340 | 191 | 2 | 37 | 366 | 7 | 346 | 1.14e-93 | 285 |
| MS.gene025561.t1 | AT1G29980 | 40.882 | 340 | 191 | 2 | 37 | 366 | 43 | 382 | 4.07e-93 | 285 |
| MS.gene025561.t1 | AT2G34510 | 41.071 | 336 | 192 | 2 | 37 | 366 | 43 | 378 | 7.00e-93 | 284 |
| MS.gene025561.t1 | AT2G34510 | 42.466 | 292 | 162 | 2 | 81 | 366 | 1 | 292 | 3.01e-83 | 256 |
| MS.gene025561.t1 | AT5G14150 | 27.763 | 389 | 231 | 14 | 4 | 370 | 1 | 361 | 3.91e-32 | 124 |
| MS.gene025561.t1 | AT5G14150 | 27.763 | 389 | 231 | 14 | 4 | 370 | 1 | 361 | 3.91e-32 | 124 |
Find 95 sgRNAs with CRISPR-Local
Find 263 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCATTGGTTGTGTTGAAAAT+AGG | 0.150119 | 4.3:+60714165 | None:intergenic |
| CTTTGAGTCAATGAATTTAA+TGG | 0.155305 | 4.3:+60714071 | None:intergenic |
| GTCTCTCTTTGCAGCTAATT+TGG | 0.160239 | 4.3:-60714220 | MS.gene025561:intron |
| CATACAAAGATCAATGATTT+TGG | 0.185284 | 4.3:-60713760 | MS.gene025561:CDS |
| TCCTACTTGTGGTCCACTTT+TGG | 0.248583 | 4.3:-60715259 | MS.gene025561:CDS |
| CCCTTTCCAACAGATTTAAA+AGG | 0.279827 | 4.3:+60713859 | None:intergenic |
| ACAATGTATGCTCTAATATT+AGG | 0.284249 | 4.3:-60715456 | MS.gene025561:CDS |
| GACACAAGATCTTGTTGTTT+TGG | 0.296512 | 4.3:+60714129 | None:intergenic |
| TTCAAGTTGTAGACTTTGTT+TGG | 0.300419 | 4.3:+60713964 | None:intergenic |
| CATTGGTTGTGTTGAAAATA+GGG | 0.312212 | 4.3:+60714166 | None:intergenic |
| TAGACCATTGATTTCCCATT+TGG | 0.321175 | 4.3:+60715602 | None:intergenic |
| GCTGCTCAAAGTTCCCATTT+TGG | 0.321631 | 4.3:+60715679 | None:intergenic |
| CTTCTTGAATACCAGGGTTA+TGG | 0.328613 | 4.3:+60715283 | None:intergenic |
| CTCCATTTCCATATGGTACT+TGG | 0.332485 | 4.3:+60714043 | None:intergenic |
| CAATGGTGATGTTATTGCTT+GGG | 0.353561 | 4.3:-60715343 | MS.gene025561:CDS |
| GATCTTGTGTCACCACTTCC+TGG | 0.359851 | 4.3:-60714117 | MS.gene025561:CDS |
| TATGATTCATTACCTCTTGT+AGG | 0.362060 | 4.3:+60715201 | None:intergenic |
| TGTACCAGGTTTGACTTTGA+TGG | 0.379755 | 4.3:+60715476 | None:intergenic |
| AATGAATTTAATGGCTTTGA+GGG | 0.380586 | 4.3:+60714080 | None:intergenic |
| TTGTGTCACCACTTCCTGGC+TGG | 0.382793 | 4.3:-60714113 | MS.gene025561:CDS |
| AGCATTACCTTCTGGTGACC+TGG | 0.393165 | 4.3:+60716463 | None:intergenic |
| GGAGCAGTGGAGCTTGTTGC+AGG | 0.402346 | 4.3:-60714024 | MS.gene025561:CDS |
| CAAACACTTTATAGCCTCAA+TGG | 0.405480 | 4.3:-60715360 | MS.gene025561:CDS |
| ACAATTGGAGATGGAAGAAA+TGG | 0.406784 | 4.3:-60713937 | MS.gene025561:CDS |
| TGTTATTGCTTGGGGATTCA+AGG | 0.409886 | 4.3:-60715334 | MS.gene025561:CDS |
| ATCTCAGTGCCTCCACAATC+TGG | 0.419190 | 4.3:-60715396 | MS.gene025561:CDS |
| ATAAAGAAAACAAGACTCAT+TGG | 0.436385 | 4.3:-60715639 | MS.gene025561:CDS |
| TACAACTTGAAATTCACAAT+TGG | 0.439360 | 4.3:-60713952 | MS.gene025561:CDS |
| AGACCATTGATTTCCCATTT+GGG | 0.443676 | 4.3:+60715603 | None:intergenic |
| CAATGAATTTAATGGCTTTG+AGG | 0.445583 | 4.3:+60714079 | None:intergenic |
| TGTAGAATGTGATTCTTGTT+CGG | 0.448271 | 4.3:+60713794 | None:intergenic |
| GGAAACATGCACTTCCCAAA+TGG | 0.453870 | 4.3:-60715617 | MS.gene025561:CDS |
| TTCCAAGTACCATATGGAAA+TGG | 0.458822 | 4.3:-60714045 | MS.gene025561:CDS |
| AAGAACATGCCTCCAGGTTG+TGG | 0.465220 | 4.3:+60715558 | None:intergenic |
| AAGCATTTCCAAGTACCATA+TGG | 0.468946 | 4.3:-60714051 | MS.gene025561:CDS |
| ATCTTGAGCACAAGTTCTTG+TGG | 0.474361 | 4.3:+60715431 | None:intergenic |
| TTGAAATTCACAATTGGAGA+TGG | 0.477182 | 4.3:-60713946 | MS.gene025561:CDS |
| TGCTGCTTCAGCATTTGCTA+AGG | 0.479893 | 4.3:-60716492 | MS.gene025561:CDS |
| ATCTCTGGAGGGCCACAACC+TGG | 0.481932 | 4.3:-60715570 | MS.gene025561:CDS |
| GAAACATGCACTTCCCAAAT+GGG | 0.487880 | 4.3:-60715616 | MS.gene025561:CDS |
| GCATGAACTCCATGTGACAC+TGG | 0.490852 | 4.3:+60715534 | None:intergenic |
| TCCACTGCTCCATTTCCATA+TGG | 0.490864 | 4.3:+60714036 | None:intergenic |
| GGTCTAGTAGAATATATCTC+TGG | 0.497686 | 4.3:-60715585 | MS.gene025561:CDS |
| TAAAGAAAACAAGACTCATT+GGG | 0.498826 | 4.3:-60715638 | MS.gene025561:CDS |
| TCAATAATCCAGCCAGGAAG+TGG | 0.503974 | 4.3:+60714105 | None:intergenic |
| GACTTTGATGGTTTGTGAGA+TGG | 0.505809 | 4.3:+60715488 | None:intergenic |
| TTACCTCTTGTAGGCATAGG+AGG | 0.508106 | 4.3:+60715210 | None:intergenic |
| GTAGGATCTTCTTGAATACC+AGG | 0.508723 | 4.3:+60715276 | None:intergenic |
| AATGGACCCTCTTCAAAGCC+GGG | 0.513053 | 4.3:+60714189 | None:intergenic |
| ATAAGACAAGTTTAAGCGAC+GGG | 0.516863 | 4.3:+60713697 | None:intergenic |
| GCATTACCTTCTGGTGACCT+GGG | 0.517202 | 4.3:+60716464 | None:intergenic |
| GAATGGACCCTCTTCAAAGC+CGG | 0.519609 | 4.3:+60714188 | None:intergenic |
| GGAGTTCATGCAGTTAGACT+TGG | 0.527950 | 4.3:-60715522 | MS.gene025561:CDS |
| TCATTACCTCTTGTAGGCAT+AGG | 0.528799 | 4.3:+60715207 | None:intergenic |
| AATGGTGATGTTATTGCTTG+GGG | 0.532837 | 4.3:-60715342 | MS.gene025561:CDS |
| CTTCCCAAATGGGAAATCAA+TGG | 0.539730 | 4.3:-60715606 | MS.gene025561:CDS |
| AGTGGAGCTTGTTGCAGGAA+GGG | 0.542398 | 4.3:-60714019 | MS.gene025561:CDS |
| CAGTGGAGCTTGTTGCAGGA+AGG | 0.550407 | 4.3:-60714020 | MS.gene025561:CDS |
| ATTAGAGCATACATTGTACC+AGG | 0.551088 | 4.3:+60715462 | None:intergenic |
| CTATAACTTGATCAAGGACC+GGG | 0.555898 | 4.3:+60713725 | None:intergenic |
| CAAACCATCAAAGTCAAACC+TGG | 0.562139 | 4.3:-60715480 | MS.gene025561:CDS |
| AGGGATTCAATAATCCAGCC+AGG | 0.562258 | 4.3:+60714099 | None:intergenic |
| ATAGCAACAGCATCCAAAAG+TGG | 0.564034 | 4.3:+60715246 | None:intergenic |
| ACTATAACTTGATCAAGGAC+CGG | 0.565852 | 4.3:+60713724 | None:intergenic |
| ACTGGGAAGAACATGCCTCC+AGG | 0.567603 | 4.3:+60715552 | None:intergenic |
| GATGGAAGAAATGGATGTCA+TGG | 0.567802 | 4.3:-60713928 | MS.gene025561:CDS |
| CATGAACTCCATGTGACACT+GGG | 0.571284 | 4.3:+60715535 | None:intergenic |
| AAGAACCCCGGCTTTGAAGA+GGG | 0.580803 | 4.3:-60714195 | MS.gene025561:CDS |
| TCAATGGTGATGTTATTGCT+TGG | 0.581184 | 4.3:-60715344 | MS.gene025561:CDS |
| GGGATACTATAACTTGATCA+AGG | 0.584716 | 4.3:+60713719 | None:intergenic |
| CTAGTAGAATATATCTCTGG+AGG | 0.586760 | 4.3:-60715582 | MS.gene025561:CDS |
| AAAGAACCCCGGCTTTGAAG+AGG | 0.587801 | 4.3:-60714196 | MS.gene025561:CDS |
| GTTGTGTTGAAAATAGGGAA+TGG | 0.589619 | 4.3:+60714171 | None:intergenic |
| AAAGAAACTTCACCAGATTG+TGG | 0.591280 | 4.3:+60715384 | None:intergenic |
| GCTAATTTGGTAAAGAACCC+CGG | 0.592775 | 4.3:-60714207 | MS.gene025561:CDS |
| TGGTGGGAGTATGACACCAT+TGG | 0.597066 | 4.3:+60714149 | None:intergenic |
| TGGATGTCATGGATCAATGA+TGG | 0.615968 | 4.3:-60713917 | MS.gene025561:CDS |
| AAGCAATAACATCACCATTG+AGG | 0.621145 | 4.3:+60715346 | None:intergenic |
| ATGTTCTTCCCAGTGTCACA+TGG | 0.627696 | 4.3:-60715543 | MS.gene025561:CDS |
| CATTACCTTCTGGTGACCTG+GGG | 0.628076 | 4.3:+60716465 | None:intergenic |
| AAAGTTACATTCCATAACCC+TGG | 0.629174 | 4.3:-60715294 | MS.gene025561:CDS |
| ATTCAAGAAGATCCTACTTG+TGG | 0.631810 | 4.3:-60715270 | MS.gene025561:CDS |
| AATAAGACAAGTTTAAGCGA+CGG | 0.632333 | 4.3:+60713696 | None:intergenic |
| CATTTGCTAAGGTTCACCCC+AGG | 0.638813 | 4.3:-60716481 | MS.gene025561:CDS |
| ACCATATGGAAATGGAGCAG+TGG | 0.640638 | 4.3:-60714037 | MS.gene025561:CDS |
| TATCCTCCTATGCCTACAAG+AGG | 0.642129 | 4.3:-60715213 | MS.gene025561:intron |
| TCCAAAAGTGGACCACAAGT+AGG | 0.642666 | 4.3:+60715258 | None:intergenic |
| TAGGATCTTCTTGAATACCA+GGG | 0.651918 | 4.3:+60715277 | None:intergenic |
| ATGGACCCTCTTCAAAGCCG+GGG | 0.654789 | 4.3:+60714190 | None:intergenic |
| TAGTAGAATATATCTCTGGA+GGG | 0.660581 | 4.3:-60715581 | MS.gene025561:CDS |
| GTTCACCCCAGGTCACCAGA+AGG | 0.680013 | 4.3:-60716470 | MS.gene025561:intron |
| GAAACTTCACCAGATTGTGG+AGG | 0.698985 | 4.3:+60715387 | None:intergenic |
| TCTGGAGGGCCACAACCTGG+AGG | 0.701197 | 4.3:-60715567 | MS.gene025561:CDS |
| AAGACAAGTTTAAGCGACGG+GGG | 0.710310 | 4.3:+60713699 | None:intergenic |
| TAAGACAAGTTTAAGCGACG+GGG | 0.727938 | 4.3:+60713698 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAATAAAAAAAATAATGTTT+CGG | - | chr4.3:60714053-60714072 | MS.gene025561:CDS | 10.0% |
| !!! | ATAAAGTAATATTTTACATT+TGG | - | chr4.3:60715469-60715488 | MS.gene025561:CDS | 10.0% |
| !!! | ATTTTTAATTTTTTCGAAAA+TGG | - | chr4.3:60714077-60714096 | MS.gene025561:CDS | 10.0% |
| !!! | TAAAGTAATATTTTACATTT+GGG | - | chr4.3:60715470-60715489 | MS.gene025561:CDS | 10.0% |
| !!! | TACATTTTTTATTAATAACT+TGG | - | chr4.3:60714500-60714519 | MS.gene025561:intron | 10.0% |
| !!! | TTTTTATTGTTTAAAAAATG+TGG | + | chr4.3:60714042-60714061 | None:intergenic | 10.0% |
| !! | ATTGAAAAAATTATTCAATG+CGG | + | chr4.3:60715280-60715299 | None:intergenic | 15.0% |
| !! | TATCAAATTATTAACAATGT+TGG | - | chr4.3:60715836-60715855 | MS.gene025561:intron | 15.0% |
| !!! | TTGTTTTCTTTATGTATTTT+GGG | + | chr4.3:60714607-60714626 | None:intergenic | 15.0% |
| !!! | TTTGTTTTTTGATTCAAATA+GGG | - | chr4.3:60715976-60715995 | MS.gene025561:intron | 15.0% |
| !!! | TTTTCAAAAATTGGAAAATA+TGG | - | chr4.3:60714108-60714127 | MS.gene025561:CDS | 15.0% |
| !!! | TTTTGTTTTTTGATTCAAAT+AGG | - | chr4.3:60715975-60715994 | MS.gene025561:intron | 15.0% |
| !! | TAATAAAAAATGTAGAGCAT+AGG | + | chr4.3:60714494-60714513 | None:intergenic | 20.0% |
| !! | TGTTTAATAAGACTAAAACA+TGG | - | chr4.3:60716011-60716030 | MS.gene025561:intron | 20.0% |
| !! | TTGAAAAAATTATTCAATGC+GGG | + | chr4.3:60715279-60715298 | None:intergenic | 20.0% |
| !!! | CTTGTTTTCTTTATGTATTT+TGG | + | chr4.3:60714608-60714627 | None:intergenic | 20.0% |
| !!! | GTAGATCTATTTTCAAAAAT+TGG | - | chr4.3:60714099-60714118 | MS.gene025561:CDS | 20.0% |
| !!! | TTCATTTTAAATTGCTAACA+AGG | - | chr4.3:60713953-60713972 | MS.gene025561:CDS | 20.0% |
| ! | AAAATATGGAGGAAAAATGT+TGG | - | chr4.3:60714122-60714141 | MS.gene025561:CDS | 25.0% |
| ! | AAACTACCTTTGATACTTAA+AGG | + | chr4.3:60715404-60715423 | None:intergenic | 25.0% |
| ! | ACAATGTATGCTCTAATATT+AGG | - | chr4.3:60714797-60714816 | MS.gene025561:intron | 25.0% |
| ! | ATAAAGAAAACAAGACTCAT+TGG | - | chr4.3:60714614-60714633 | MS.gene025561:intron | 25.0% |
| ! | CCACTTCAACTAATAAATAT+AGG | + | chr4.3:60714159-60714178 | None:intergenic | 25.0% |
| ! | CCTATATTTATTAGTTGAAG+TGG | - | chr4.3:60714156-60714175 | MS.gene025561:CDS | 25.0% |
| ! | CTTTGAGTCAATGAATTTAA+TGG | + | chr4.3:60716185-60716204 | None:intergenic | 25.0% |
| ! | TAAAGAAAACAAGACTCATT+GGG | - | chr4.3:60714615-60714634 | MS.gene025561:intron | 25.0% |
| ! | TACAACTTGAAATTCACAAT+TGG | - | chr4.3:60716301-60716320 | MS.gene025561:intron | 25.0% |
| ! | TATATATTAAGAAGTCACAC+TGG | + | chr4.3:60714328-60714347 | None:intergenic | 25.0% |
| ! | TCAAAAATTGGAAAATATGG+AGG | - | chr4.3:60714111-60714130 | MS.gene025561:CDS | 25.0% |
| ! | TCATATTATTAGCACAGATA+CGG | + | chr4.3:60715891-60715910 | None:intergenic | 25.0% |
| ! | TGAAAAAATTATTCAATGCG+GGG | + | chr4.3:60715278-60715297 | None:intergenic | 25.0% |
| !! | AAAGTTCCTTTTAAATCTGT+TGG | - | chr4.3:60716388-60716407 | MS.gene025561:intron | 25.0% |
| !! | AAAGTTTGTTTCATTGAGAT+TGG | + | chr4.3:60715690-60715709 | None:intergenic | 25.0% |
| !! | ATAAATGAGAGTGTAATGTT+TGG | + | chr4.3:60714238-60714257 | None:intergenic | 25.0% |
| !! | ATCAAAGTTTTCTTCCAAAA+TGG | - | chr4.3:60714560-60714579 | MS.gene025561:intron | 25.0% |
| !! | CATACAAAGATCAATGATTT+TGG | - | chr4.3:60716493-60716512 | MS.gene025561:CDS | 25.0% |
| !! | GTAATATTTTACATTTGGGA+CGG | - | chr4.3:60715474-60715493 | MS.gene025561:CDS | 25.0% |
| !! | TCAAAGTTTTCTTCCAAAAT+GGG | - | chr4.3:60714561-60714580 | MS.gene025561:intron | 25.0% |
| !!! | AATGAATTTAATGGCTTTGA+GGG | + | chr4.3:60716176-60716195 | None:intergenic | 25.0% |
| !!! | GTATTACAATGTTGCTTTTA+GGG | + | chr4.3:60715326-60715345 | None:intergenic | 25.0% |
| !!! | TAATATTTTACATTTGGGAC+GGG | - | chr4.3:60715475-60715494 | MS.gene025561:CDS | 25.0% |
| !!! | TGTATTACAATGTTGCTTTT+AGG | + | chr4.3:60715327-60715346 | None:intergenic | 25.0% |
| !!! | TTCTTTATGTATTTTGGGTT+TGG | + | chr4.3:60714602-60714621 | None:intergenic | 25.0% |
| AAGTCACTGTAATTATGTGT+CGG | + | chr4.3:60715807-60715826 | None:intergenic | 30.0% | |
| ATGTAGAGAATCTAGATTCA+TGG | + | chr4.3:60715081-60715100 | None:intergenic | 30.0% | |
| CTATGATATGCTTATTGAAG+TGG | - | chr4.3:60714451-60714470 | MS.gene025561:intron | 30.0% | |
| GAAATTCTGATCCTAAATGT+TGG | - | chr4.3:60714529-60714548 | MS.gene025561:intron | 30.0% | |
| GATGAAGAAAACCAACATTT+AGG | + | chr4.3:60714543-60714562 | None:intergenic | 30.0% | |
| GTAGATCCTTTAAGTATCAA+AGG | - | chr4.3:60715395-60715414 | MS.gene025561:CDS | 30.0% | |
| TAGTAGAATATATCTCTGGA+GGG | - | chr4.3:60714672-60714691 | MS.gene025561:intron | 30.0% | |
| TATGATTCATTACCTCTTGT+AGG | + | chr4.3:60715055-60715074 | None:intergenic | 30.0% | |
| TGTAGAATGTGATTCTTGTT+CGG | + | chr4.3:60716462-60716481 | None:intergenic | 30.0% | |
| TTGAAATTCACAATTGGAGA+TGG | - | chr4.3:60716307-60716326 | MS.gene025561:intron | 30.0% | |
| ! | AATGATTTTGGACATATGTG+CGG | - | chr4.3:60716505-60716524 | MS.gene025561:CDS | 30.0% |
| ! | ATGTTTGGAACAAATGTGTT+AGG | + | chr4.3:60714223-60714242 | None:intergenic | 30.0% |
| ! | CAATGAATTTAATGGCTTTG+AGG | + | chr4.3:60716177-60716196 | None:intergenic | 30.0% |
| ! | CATTGGTTGTGTTGAAAATA+GGG | + | chr4.3:60716090-60716109 | None:intergenic | 30.0% |
| ! | CCTTTTAAATCTGTTGGAAA+GGG | - | chr4.3:60716394-60716413 | MS.gene025561:intron | 30.0% |
| ! | TCCTTTTAAATCTGTTGGAA+AGG | - | chr4.3:60716393-60716412 | MS.gene025561:intron | 30.0% |
| ! | TTTTCCCCGATTTCAAAATA+CGG | + | chr4.3:60715553-60715572 | None:intergenic | 30.0% |
| !! | TTCAAGTTGTAGACTTTGTT+TGG | + | chr4.3:60716292-60716311 | None:intergenic | 30.0% |
| AAAATTATTCAATGCGGGGA+CGG | + | chr4.3:60715274-60715293 | None:intergenic | 35.0% | |
| AAAGAAACTTCACCAGATTG+TGG | + | chr4.3:60714872-60714891 | None:intergenic | 35.0% | |
| AAAGTTACATTCCATAACCC+TGG | - | chr4.3:60714959-60714978 | MS.gene025561:intron | 35.0% | |
| AAGCAATAACATCACCATTG+AGG | + | chr4.3:60714910-60714929 | None:intergenic | 35.0% | |
| AAGCATTTCCAAGTACCATA+TGG | - | chr4.3:60716202-60716221 | MS.gene025561:intron | 35.0% | |
| AAGTATATGAGAATCGGGTA+AGG | + | chr4.3:60715165-60715184 | None:intergenic | 35.0% | |
| ACAATTGGAGATGGAAGAAA+TGG | - | chr4.3:60716316-60716335 | MS.gene025561:intron | 35.0% | |
| ACTATAACTTGATCAAGGAC+CGG | + | chr4.3:60716532-60716551 | None:intergenic | 35.0% | |
| AGTATATGAGAATCGGGTAA+GGG | + | chr4.3:60715164-60715183 | None:intergenic | 35.0% | |
| ATTAGAGCATACATTGTACC+AGG | + | chr4.3:60714794-60714813 | None:intergenic | 35.0% | |
| ATTCAAGAAGATCCTACTTG+TGG | - | chr4.3:60714983-60715002 | MS.gene025561:intron | 35.0% | |
| ATTCAATTTCTCATCCCTGT+TGG | + | chr4.3:60715208-60715227 | None:intergenic | 35.0% | |
| ATTCTCTACATCACAGTCAT+AGG | - | chr4.3:60715090-60715109 | MS.gene025561:intron | 35.0% | |
| CAAACACTTTATAGCCTCAA+TGG | - | chr4.3:60714893-60714912 | MS.gene025561:intron | 35.0% | |
| CCCTTTCCAACAGATTTAAA+AGG | + | chr4.3:60716397-60716416 | None:intergenic | 35.0% | |
| CGATTTCAAAATACGGGTAT+GGG | + | chr4.3:60715546-60715565 | None:intergenic | 35.0% | |
| CTAGTAGAATATATCTCTGG+AGG | - | chr4.3:60714671-60714690 | MS.gene025561:intron | 35.0% | |
| GGGATACTATAACTTGATCA+AGG | + | chr4.3:60716537-60716556 | None:intergenic | 35.0% | |
| GGTCTAGTAGAATATATCTC+TGG | - | chr4.3:60714668-60714687 | MS.gene025561:intron | 35.0% | |
| GTTGTGTTGAAAATAGGGAA+TGG | + | chr4.3:60716085-60716104 | None:intergenic | 35.0% | |
| TAGAATTGAGCATTACCTTC+TGG | + | chr4.3:60713801-60713820 | None:intergenic | 35.0% | |
| TAGGATCTTCTTGAATACCA+GGG | + | chr4.3:60714979-60714998 | None:intergenic | 35.0% | |
| TCGACATGTCAATATAATGG+CGG | - | chr4.3:60714391-60714410 | MS.gene025561:intron | 35.0% | |
| TCGGGTAAGTATATGAGAAT+CGG | + | chr4.3:60715171-60715190 | None:intergenic | 35.0% | |
| TGTTAAAGTGAGCGTATTGT+TGG | + | chr4.3:60715354-60715373 | None:intergenic | 35.0% | |
| TTACCTCACCTATAGATTGA+AGG | - | chr4.3:60714284-60714303 | MS.gene025561:intron | 35.0% | |
| TTCAATTTCTCATCCCTGTT+GGG | + | chr4.3:60715207-60715226 | None:intergenic | 35.0% | |
| TTCCAAGTACCATATGGAAA+TGG | - | chr4.3:60716208-60716227 | MS.gene025561:intron | 35.0% | |
| TTTCCCCGATTTCAAAATAC+GGG | + | chr4.3:60715552-60715571 | None:intergenic | 35.0% | |
| ! | AATGGTGATGTTATTGCTTG+GGG | - | chr4.3:60714911-60714930 | MS.gene025561:intron | 35.0% |
| ! | CAATGGTGATGTTATTGCTT+GGG | - | chr4.3:60714910-60714929 | MS.gene025561:intron | 35.0% |
| ! | CCATTGGTTGTGTTGAAAAT+AGG | + | chr4.3:60716091-60716110 | None:intergenic | 35.0% |
| ! | CCTATTTTCAACACAACCAA+TGG | - | chr4.3:60716088-60716107 | MS.gene025561:intron | 35.0% |
| ! | GTGTCGACATGTCAATATAA+TGG | - | chr4.3:60714388-60714407 | MS.gene025561:intron | 35.0% |
| ! | TCAATGGTGATGTTATTGCT+TGG | - | chr4.3:60714909-60714928 | MS.gene025561:intron | 35.0% |
| !! | AGACCATTGATTTCCCATTT+GGG | + | chr4.3:60714653-60714672 | None:intergenic | 35.0% |
| !! | CTATAGATTGAAGGTGTCTA+CGG | - | chr4.3:60714293-60714312 | MS.gene025561:intron | 35.0% |
| !! | TAGACCATTGATTTCCCATT+TGG | + | chr4.3:60714654-60714673 | None:intergenic | 35.0% |
| !!! | ACAAGATCTTGTTGTTTTGG+TGG | + | chr4.3:60716124-60716143 | None:intergenic | 35.0% |
| !!! | ATACCCGTATTTTGAAATCG+GGG | - | chr4.3:60715546-60715565 | MS.gene025561:CDS | 35.0% |
| !!! | CAAGATCTTGTTGTTTTGGT+GGG | + | chr4.3:60716123-60716142 | None:intergenic | 35.0% |
| !!! | CATACCCGTATTTTGAAATC+GGG | - | chr4.3:60715545-60715564 | MS.gene025561:CDS | 35.0% |
| !!! | CCATACCCGTATTTTGAAAT+CGG | - | chr4.3:60715544-60715563 | MS.gene025561:CDS | 35.0% |
| !!! | GACACAAGATCTTGTTGTTT+TGG | + | chr4.3:60716127-60716146 | None:intergenic | 35.0% |
| AAAACCCGTCAAATTGGGTT+TGG | - | chr4.3:60715607-60715626 | MS.gene025561:CDS | 40.0% | |
| AAATTATTCAATGCGGGGAC+GGG | + | chr4.3:60715273-60715292 | None:intergenic | 40.0% | |
| AACAGACACAACACGGATAT+TGG | + | chr4.3:60715866-60715885 | None:intergenic | 40.0% | |
| ACACCTTCAATCTATAGGTG+AGG | + | chr4.3:60714290-60714309 | None:intergenic | 40.0% | |
| ATACCCAAACCCAGTCAAAA+CGG | - | chr4.3:60715582-60715601 | MS.gene025561:CDS | 40.0% | |
| ATAGCAACAGCATCCAAAAG+TGG | + | chr4.3:60715010-60715029 | None:intergenic | 40.0% | |
| ATCTTGAGCACAAGTTCTTG+TGG | + | chr4.3:60714825-60714844 | None:intergenic | 40.0% | |
| CAAACCATCAAAGTCAAACC+TGG | - | chr4.3:60714773-60714792 | MS.gene025561:intron | 40.0% | |
| CCGATTTCAAAATACGGGTA+TGG | + | chr4.3:60715547-60715566 | None:intergenic | 40.0% | |
| CGACATGTCAATATAATGGC+GGG | - | chr4.3:60714392-60714411 | MS.gene025561:intron | 40.0% | |
| CGGGTAAGTATATGAGAATC+GGG | + | chr4.3:60715170-60715189 | None:intergenic | 40.0% | |
| CGTAGACACCTTCAATCTAT+AGG | + | chr4.3:60714295-60714314 | None:intergenic | 40.0% | |
| CTATAACTTGATCAAGGACC+GGG | + | chr4.3:60716531-60716550 | None:intergenic | 40.0% | |
| CTCCATTTCCATATGGTACT+TGG | + | chr4.3:60716213-60716232 | None:intergenic | 40.0% | |
| CTTCCCAAATGGGAAATCAA+TGG | - | chr4.3:60714647-60714666 | MS.gene025561:intron | 40.0% | |
| CTTCTTGAATACCAGGGTTA+TGG | + | chr4.3:60714973-60714992 | None:intergenic | 40.0% | |
| GAAACATGCACTTCCCAAAT+GGG | - | chr4.3:60714637-60714656 | MS.gene025561:intron | 40.0% | |
| GATGGAAGAAATGGATGTCA+TGG | - | chr4.3:60716325-60716344 | MS.gene025561:intron | 40.0% | |
| GCTAATTTGGTAAAGAACCC+CGG | - | chr4.3:60716046-60716065 | MS.gene025561:intron | 40.0% | |
| GTAGGATCTTCTTGAATACC+AGG | + | chr4.3:60714980-60714999 | None:intergenic | 40.0% | |
| GTATATGAGAATCGGGTAAG+GGG | + | chr4.3:60715163-60715182 | None:intergenic | 40.0% | |
| GTCTCTCTTTGCAGCTAATT+TGG | - | chr4.3:60716033-60716052 | MS.gene025561:intron | 40.0% | |
| TCATTACCTCTTGTAGGCAT+AGG | + | chr4.3:60715049-60715068 | None:intergenic | 40.0% | |
| TCTACATCACAGTCATAGGT+AGG | - | chr4.3:60715094-60715113 | MS.gene025561:intron | 40.0% | |
| TGGATGTCATGGATCAATGA+TGG | - | chr4.3:60716336-60716355 | MS.gene025561:intron | 40.0% | |
| TGTTATTGCTTGGGGATTCA+AGG | - | chr4.3:60714919-60714938 | MS.gene025561:intron | 40.0% | |
| TTAAGAAGTCACACTGGTGT+CGG | + | chr4.3:60714322-60714341 | None:intergenic | 40.0% | |
| TTCAAAATACGGGTATGGGA+CGG | + | chr4.3:60715542-60715561 | None:intergenic | 40.0% | |
| TTGTAGCACTAACTCAGAGA+CGG | + | chr4.3:60714421-60714440 | None:intergenic | 40.0% | |
| ! | ACAAATGTGTTAGGTTGCGT+AGG | + | chr4.3:60714214-60714233 | None:intergenic | 40.0% |
| ! | GACTTTGATGGTTTGTGAGA+TGG | + | chr4.3:60714768-60714787 | None:intergenic | 40.0% |
| ! | TGTACCAGGTTTGACTTTGA+TGG | + | chr4.3:60714780-60714799 | None:intergenic | 40.0% |
| ! | TTTACATTTGGGACGGGTTT+GGG | - | chr4.3:60715481-60715500 | MS.gene025561:CDS | 40.0% |
| !! | TTTTACATTTGGGACGGGTT+TGG | - | chr4.3:60715480-60715499 | MS.gene025561:CDS | 40.0% |
| !! | TTTTGACTGGGTTTGGGTAT+GGG | + | chr4.3:60715582-60715601 | None:intergenic | 40.0% |
| AATTATTCAATGCGGGGACG+GGG | + | chr4.3:60715272-60715291 | None:intergenic | 45.0% | |
| ACCATATGGAAATGGAGCAG+TGG | - | chr4.3:60716216-60716235 | MS.gene025561:intron | 45.0% | |
| AGGGATTCAATAATCCAGCC+AGG | + | chr4.3:60716157-60716176 | None:intergenic | 45.0% | |
| ATCACAGTCATAGGTAGGCA+TGG | - | chr4.3:60715099-60715118 | MS.gene025561:intron | 45.0% | |
| ATGTTCTTCCCAGTGTCACA+TGG | - | chr4.3:60714710-60714729 | MS.gene025561:intron | 45.0% | |
| ATTGGACGAGACCTATGACT+AGG | + | chr4.3:60715672-60715691 | None:intergenic | 45.0% | |
| CATGAACTCCATGTGACACT+GGG | + | chr4.3:60714721-60714740 | None:intergenic | 45.0% | |
| CCGAACCAAACCCAATTTGA+CGG | + | chr4.3:60715615-60715634 | None:intergenic | 45.0% | |
| CGAACCAAACCCAATTTGAC+GGG | + | chr4.3:60715614-60715633 | None:intergenic | 45.0% | |
| GAAACTTCACCAGATTGTGG+AGG | + | chr4.3:60714869-60714888 | None:intergenic | 45.0% | |
| GGAAACATGCACTTCCCAAA+TGG | - | chr4.3:60714636-60714655 | MS.gene025561:intron | 45.0% | |
| GGAGTTCATGCAGTTAGACT+TGG | - | chr4.3:60714731-60714750 | MS.gene025561:intron | 45.0% | |
| TACCCAAACCCAGTCAAAAC+GGG | - | chr4.3:60715583-60715602 | MS.gene025561:CDS | 45.0% | |
| TACGGACAACAGACACAACA+CGG | + | chr4.3:60715873-60715892 | None:intergenic | 45.0% | |
| TATCCTCCTATGCCTACAAG+AGG | - | chr4.3:60715040-60715059 | MS.gene025561:intron | 45.0% | |
| TCAAAATACGGGTATGGGAC+GGG | + | chr4.3:60715541-60715560 | None:intergenic | 45.0% | |
| TCAATAATCCAGCCAGGAAG+TGG | + | chr4.3:60716151-60716170 | None:intergenic | 45.0% | |
| TCACAGACACTCCTCAGATT+AGG | - | chr4.3:60715752-60715771 | MS.gene025561:intron | 45.0% | |
| TCATAGGTAGGCATGGCAAT+GGG | - | chr4.3:60715106-60715125 | MS.gene025561:intron | 45.0% | |
| TCCAAAAGTGGACCACAAGT+AGG | + | chr4.3:60714998-60715017 | None:intergenic | 45.0% | |
| TCCACTGCTCCATTTCCATA+TGG | + | chr4.3:60716220-60716239 | None:intergenic | 45.0% | |
| TTACCTCTTGTAGGCATAGG+AGG | + | chr4.3:60715046-60715065 | None:intergenic | 45.0% | |
| TTCTCATCCCTGTTGGGTAT+GGG | + | chr4.3:60715201-60715220 | None:intergenic | 45.0% | |
| TTGTTGCCATGCCTAGTCAT+AGG | - | chr4.3:60715658-60715677 | MS.gene025561:CDS | 45.0% | |
| TTTCTCATCCCTGTTGGGTA+TGG | + | chr4.3:60715202-60715221 | None:intergenic | 45.0% | |
| ! | CCGTCAAATTGGGTTTGGTT+CGG | - | chr4.3:60715612-60715631 | MS.gene025561:CDS | 45.0% |
| ! | CGTCAAATTGGGTTTGGTTC+GGG | - | chr4.3:60715613-60715632 | MS.gene025561:CDS | 45.0% |
| ! | GCTGCTCAAAGTTCCCATTT+TGG | + | chr4.3:60714577-60714596 | None:intergenic | 45.0% |
| ! | TCCTACTTGTGGTCCACTTT+TGG | - | chr4.3:60714994-60715013 | MS.gene025561:intron | 45.0% |
| ! | TGCTGCTTCAGCATTTGCTA+AGG | - | chr4.3:60713761-60713780 | MS.gene025561:CDS | 45.0% |
| !! | AAATTGGGTTTGGTTCGGGT+GGG | - | chr4.3:60715617-60715636 | MS.gene025561:CDS | 45.0% |
| !!! | GTTTTGACTGGGTTTGGGTA+TGG | + | chr4.3:60715583-60715602 | None:intergenic | 45.0% |
| AAGAACATGCCTCCAGGTTG+TGG | + | chr4.3:60714698-60714717 | None:intergenic | 50.0% | |
| AATGGACCCTCTTCAAAGCC+GGG | + | chr4.3:60716067-60716086 | None:intergenic | 50.0% | |
| ACCCAAACCCAGTCAAAACG+GGG | - | chr4.3:60715584-60715603 | MS.gene025561:CDS | 50.0% | |
| ACGAGACCTATGACTAGGCA+TGG | + | chr4.3:60715667-60715686 | None:intergenic | 50.0% | |
| ACGGGGAAAACCCGTCAAAT+TGG | - | chr4.3:60715601-60715620 | MS.gene025561:CDS | 50.0% | |
| ACTGGGTTTGGGTATGGGTA+TGG | + | chr4.3:60715577-60715596 | None:intergenic | 50.0% | |
| AGCATTACCTTCTGGTGACC+TGG | + | chr4.3:60713793-60713812 | None:intergenic | 50.0% | |
| ATACCCTACCCATACCCAAC+AGG | - | chr4.3:60715190-60715209 | MS.gene025561:intron | 50.0% | |
| ATCCCTGTTGGGTATGGGTA+GGG | + | chr4.3:60715196-60715215 | None:intergenic | 50.0% | |
| ATCTCAGTGCCTCCACAATC+TGG | - | chr4.3:60714857-60714876 | MS.gene025561:intron | 50.0% | |
| ATGAGAATCGGGTAAGGGGA+TGG | + | chr4.3:60715159-60715178 | None:intergenic | 50.0% | |
| CATAGGTAGGCATGGCAATG+GGG | - | chr4.3:60715107-60715126 | MS.gene025561:intron | 50.0% | |
| CATTACCTTCTGGTGACCTG+GGG | + | chr4.3:60713791-60713810 | None:intergenic | 50.0% | |
| CGGGGAAAACCCGTCAAATT+GGG | - | chr4.3:60715602-60715621 | MS.gene025561:CDS | 50.0% | |
| CTGGGTTTGGGTATGGGTAT+GGG | + | chr4.3:60715576-60715595 | None:intergenic | 50.0% | |
| GAATGGACCCTCTTCAAAGC+CGG | + | chr4.3:60716068-60716087 | None:intergenic | 50.0% | |
| GATCTTGTGTCACCACTTCC+TGG | - | chr4.3:60716136-60716155 | MS.gene025561:intron | 50.0% | |
| GATTAGGCGTGTGACGGTAT+TGG | - | chr4.3:60715768-60715787 | MS.gene025561:intron | 50.0% | |
| GCATGAACTCCATGTGACAC+TGG | + | chr4.3:60714722-60714741 | None:intergenic | 50.0% | |
| GCATTACCTTCTGGTGACCT+GGG | + | chr4.3:60713792-60713811 | None:intergenic | 50.0% | |
| GGCAACAAAACCCATACCCA+CGG | + | chr4.3:60715646-60715665 | None:intergenic | 50.0% | |
| GTCATAGGTAGGCATGGCAA+TGG | - | chr4.3:60715105-60715124 | MS.gene025561:intron | 50.0% | |
| GTTGGGTATGGGTAGGGTAT+CGG | + | chr4.3:60715190-60715209 | None:intergenic | 50.0% | |
| TACCCTACCCATACCCAACA+GGG | - | chr4.3:60715191-60715210 | MS.gene025561:intron | 50.0% | |
| TCCTCAGATTAGGCGTGTGA+CGG | - | chr4.3:60715762-60715781 | MS.gene025561:intron | 50.0% | |
| TGAGAATCGGGTAAGGGGAT+GGG | + | chr4.3:60715158-60715177 | None:intergenic | 50.0% | |
| ! | ATTTGGGACGGGTTTGGGTA+TGG | - | chr4.3:60715486-60715505 | MS.gene025561:CDS | 50.0% |
| ! | CATTTGCTAAGGTTCACCCC+AGG | - | chr4.3:60713772-60713791 | MS.gene025561:CDS | 50.0% |
| ! | TGGTGGGAGTATGACACCAT+TGG | + | chr4.3:60716107-60716126 | None:intergenic | 50.0% |
| ! | TTGGGTATGGGTAGGGTATC+GGG | + | chr4.3:60715189-60715208 | None:intergenic | 50.0% |
| ! | TTTGGGACGGGTTTGGGTAT+GGG | - | chr4.3:60715487-60715506 | MS.gene025561:CDS | 50.0% |
| ! | TTTTGGACATATGTGCGGCC+CGG | - | chr4.3:60716510-60716529 | MS.gene025561:CDS | 50.0% |
| !! | AAAGAACCCCGGCTTTGAAG+AGG | - | chr4.3:60716057-60716076 | MS.gene025561:intron | 50.0% |
| !! | AAGAACCCCGGCTTTGAAGA+GGG | - | chr4.3:60716058-60716077 | MS.gene025561:intron | 50.0% |
| !! | AGTGGAGCTTGTTGCAGGAA+GGG | - | chr4.3:60716234-60716253 | MS.gene025561:intron | 50.0% |
| !! | ATCTGAGGAGTGTCTGTGAG+TGG | + | chr4.3:60715751-60715770 | None:intergenic | 50.0% |
| !! | CAAATTGGGTTTGGTTCGGG+TGG | - | chr4.3:60715616-60715635 | MS.gene025561:CDS | 50.0% |
| !!! | GGGTTTTCCCCGTTTTGACT+GGG | + | chr4.3:60715594-60715613 | None:intergenic | 50.0% |
| !!! | TCCCCGTTTTGACTGGGTTT+GGG | + | chr4.3:60715588-60715607 | None:intergenic | 50.0% |
| !!! | TTCCCCGTTTTGACTGGGTT+TGG | + | chr4.3:60715589-60715608 | None:intergenic | 50.0% |
| ACCGTCACACGCCTAATCTG+AGG | + | chr4.3:60715766-60715785 | None:intergenic | 55.0% | |
| ACGGGTTTGGGTATGGGTTC+GGG | - | chr4.3:60715493-60715512 | MS.gene025561:CDS | 55.0% | |
| ACTGGGAAGAACATGCCTCC+AGG | + | chr4.3:60714704-60714723 | None:intergenic | 55.0% | |
| ATACCCAAACCCATCGGGGA+CGG | + | chr4.3:60715238-60715257 | None:intergenic | 55.0% | |
| ATGGACCCTCTTCAAAGCCG+GGG | + | chr4.3:60716066-60716085 | None:intergenic | 55.0% | |
| CATCCCTGTTGGGTATGGGT+AGG | + | chr4.3:60715197-60715216 | None:intergenic | 55.0% | |
| GAGAATCGGGTAAGGGGATG+GGG | + | chr4.3:60715157-60715176 | None:intergenic | 55.0% | |
| TACGGGTATGGGACGGGTAA+CGG | + | chr4.3:60715535-60715554 | None:intergenic | 55.0% | |
| TTGTGTCACCACTTCCTGGC+TGG | - | chr4.3:60716140-60716159 | MS.gene025561:intron | 55.0% | |
| TTTGGGTATGGGTTCGGGGT+GGG | - | chr4.3:60715498-60715517 | MS.gene025561:CDS | 55.0% | |
| ! | GACGGGTTTGGGTATGGGTT+CGG | - | chr4.3:60715492-60715511 | MS.gene025561:CDS | 55.0% |
| !! | CAGTGGAGCTTGTTGCAGGA+AGG | - | chr4.3:60716233-60716252 | MS.gene025561:intron | 55.0% |
| !! | CGGGTTTTCCCCGTTTTGAC+TGG | + | chr4.3:60715595-60715614 | None:intergenic | 55.0% |
| !! | GGGACGGGTAACGGGTATAT+AGG | + | chr4.3:60715526-60715545 | None:intergenic | 55.0% |
| ACGGGTATGGGACGGGTAAC+GGG | + | chr4.3:60715534-60715553 | None:intergenic | 60.0% | |
| AGGTAGGCATGGCAATGGGG+CGG | - | chr4.3:60715110-60715129 | MS.gene025561:intron | 60.0% | |
| ATCGGGTAAGGGGATGGGGA+AGG | + | chr4.3:60715153-60715172 | None:intergenic | 60.0% | |
| ATTCAATGCGGGGACGGGGA+TGG | + | chr4.3:60715268-60715287 | None:intergenic | 60.0% | |
| CGGGGATACCCAAACCCATC+GGG | + | chr4.3:60715243-60715262 | None:intergenic | 60.0% | |
| CGGGTTTGGGTATGGGTTCG+GGG | - | chr4.3:60715494-60715513 | MS.gene025561:CDS | 60.0% | |
| GCGGGGATACCCAAACCCAT+CGG | + | chr4.3:60715244-60715263 | None:intergenic | 60.0% | |
| GGGGATACCCAAACCCATCG+GGG | + | chr4.3:60715242-60715261 | None:intergenic | 60.0% | |
| GGGTGGGTAACCGTGGGTAT+GGG | - | chr4.3:60715633-60715652 | MS.gene025561:CDS | 60.0% | |
| GTTCACCCCAGGTCACCAGA+AGG | - | chr4.3:60713783-60713802 | MS.gene025561:CDS | 60.0% | |
| GTTTGGGTATGGGTTCGGGG+TGG | - | chr4.3:60715497-60715516 | MS.gene025561:CDS | 60.0% | |
| TACCCAAACCCATCGGGGAC+GGG | + | chr4.3:60715237-60715256 | None:intergenic | 60.0% | |
| TTCAATGCGGGGACGGGGAT+GGG | + | chr4.3:60715267-60715286 | None:intergenic | 60.0% | |
| ! | ATCTCTGGAGGGCCACAACC+TGG | - | chr4.3:60714683-60714702 | MS.gene025561:intron | 60.0% |
| ! | TGGTTCGGGTGGGTAACCGT+GGG | - | chr4.3:60715627-60715646 | MS.gene025561:CDS | 60.0% |
| !! | GGAGCAGTGGAGCTTGTTGC+AGG | - | chr4.3:60716229-60716248 | MS.gene025561:intron | 60.0% |
| !! | TTGGTTCGGGTGGGTAACCG+TGG | - | chr4.3:60715626-60715645 | MS.gene025561:CDS | 60.0% |
| AAACCCATCGGGGACGGGGA+TGG | + | chr4.3:60715232-60715251 | None:intergenic | 65.0% | |
| AACCCATCGGGGACGGGGAT+GGG | + | chr4.3:60715231-60715250 | None:intergenic | 65.0% | |
| AATCCCATCCCCGTCCCCGA+TGG | - | chr4.3:60715225-60715244 | MS.gene025561:CDS | 65.0% | |
| ACCCAAACCCATCGGGGACG+GGG | + | chr4.3:60715236-60715255 | None:intergenic | 65.0% | |
| ATCCCATCCCCGTCCCCGAT+GGG | - | chr4.3:60715226-60715245 | MS.gene025561:CDS | 65.0% | |
| CGGGTGGGTAACCGTGGGTA+TGG | - | chr4.3:60715632-60715651 | MS.gene025561:CDS | 65.0% | |
| GGTAGGCATGGCAATGGGGC+GGG | - | chr4.3:60715111-60715130 | MS.gene025561:intron | 65.0% | |
| GTAGGCATGGCAATGGGGCG+GGG | - | chr4.3:60715112-60715131 | MS.gene025561:intron | 65.0% | |
| TCAATGCGGGGACGGGGATG+GGG | + | chr4.3:60715266-60715285 | None:intergenic | 65.0% | |
| TCTGGAGGGCCACAACCTGG+AGG | - | chr4.3:60714686-60714705 | MS.gene025561:intron | 65.0% | |
| ! | ATCCCCGTCCCCGATGGGTT+TGG | - | chr4.3:60715231-60715250 | MS.gene025561:CDS | 65.0% |
| ! | TCCCCGTCCCCGATGGGTTT+GGG | - | chr4.3:60715232-60715251 | MS.gene025561:CDS | 65.0% |
| CATGGCAATGGGGCGGGGTG+GGG | - | chr4.3:60715117-60715136 | MS.gene025561:intron | 70.0% | |
| GCATGGCAATGGGGCGGGGT+GGG | - | chr4.3:60715116-60715135 | MS.gene025561:intron | 70.0% | |
| ATGCGGGGACGGGGATGGGG+CGG | + | chr4.3:60715263-60715282 | None:intergenic | 75.0% | |
| CAATGGGGCGGGGTGGGGAC+GGG | - | chr4.3:60715122-60715141 | MS.gene025561:intron | 75.0% | |
| GCAATGGGGCGGGGTGGGGA+CGG | - | chr4.3:60715121-60715140 | MS.gene025561:intron | 75.0% | |
| GGCATGGCAATGGGGCGGGG+TGG | - | chr4.3:60715115-60715134 | MS.gene025561:intron | 75.0% | |
| ! | TGCGGGGACGGGGATGGGGC+GGG | + | chr4.3:60715262-60715281 | None:intergenic | 80.0% |
| ! | GCGGGGACGGGGATGGGGCG+GGG | + | chr4.3:60715261-60715280 | None:intergenic | 85.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 60713708 | 60716567 | 60713708 | ID=MS.gene025561 |
| chr4.3 | mRNA | 60713708 | 60716567 | 60713708 | ID=MS.gene025561.t1;Parent=MS.gene025561 |
| chr4.3 | exon | 60716471 | 60716567 | 60716471 | ID=MS.gene025561.t1.exon1;Parent=MS.gene025561.t1 |
| chr4.3 | CDS | 60716471 | 60716567 | 60716471 | ID=cds.MS.gene025561.t1;Parent=MS.gene025561.t1 |
| chr4.3 | exon | 60715214 | 60715708 | 60715214 | ID=MS.gene025561.t1.exon2;Parent=MS.gene025561.t1 |
| chr4.3 | CDS | 60715214 | 60715708 | 60715214 | ID=cds.MS.gene025561.t1;Parent=MS.gene025561.t1 |
| chr4.3 | exon | 60713708 | 60714228 | 60713708 | ID=MS.gene025561.t1.exon3;Parent=MS.gene025561.t1 |
| chr4.3 | CDS | 60713708 | 60714228 | 60713708 | ID=cds.MS.gene025561.t1;Parent=MS.gene025561.t1 |
| Gene Sequence |
| Protein sequence |
