AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene025691

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene025691.t1 MTR_7g109150 99.055 635 1 1 1 630 1 635 0.0 1295
MS.gene025691.t1 MTR_4g031150 72.392 623 167 1 1 618 50 672 0.0 927
MS.gene025691.t1 MTR_1g073840 41.596 589 321 11 5 581 29 606 1.32e-134 412
MS.gene025691.t1 MTR_1g044210 39.336 572 323 12 5 562 28 589 1.16e-121 379
MS.gene025691.t1 MTR_7g116330 37.242 631 325 16 5 593 34 635 6.64e-116 363
MS.gene025691.t1 MTR_1g079790 37.304 638 358 16 3 618 26 643 3.27e-114 359
MS.gene025691.t1 MTR_1g079790 37.762 572 327 12 3 556 26 586 3.24e-109 342
MS.gene025691.t1 MTR_5g022470 33.721 258 145 4 329 562 499 754 1.13e-35 144
MS.gene025691.t1 MTR_5g022470 33.721 258 145 4 329 562 499 754 1.24e-35 144
MS.gene025691.t1 MTR_8g075340 32.031 256 152 3 329 562 461 716 6.10e-33 136
MS.gene025691.t1 MTR_3g105590 33.562 292 147 9 344 591 375 663 7.79e-33 135
MS.gene025691.t1 MTR_8g080770 30.357 280 162 4 330 577 274 552 2.44e-32 134
MS.gene025691.t1 MTR_8g080770 30.357 280 162 4 330 577 383 661 2.66e-32 134
MS.gene025691.t1 MTR_3g085130 28.333 300 175 5 330 593 438 733 1.00e-31 132
MS.gene025691.t1 MTR_3g085130 28.716 296 173 5 330 588 228 522 1.25e-31 131
MS.gene025691.t1 MTR_5g097410 30.389 283 158 5 333 577 611 892 6.57e-29 123
MS.gene025691.t1 MTR_8g106150 30.820 305 156 6 333 583 134 437 8.55e-29 122
MS.gene025691.t1 MTR_8g106150 30.820 305 156 6 333 583 377 680 1.04e-28 122
MS.gene025691.t1 MTR_1g013360 37.226 137 83 2 343 478 380 514 4.07e-20 95.5
MS.gene025691.t1 MTR_1g013360 38.393 112 64 3 479 587 585 694 1.19e-11 68.6
MS.gene025691.t1 MTR_1g087140 28.939 311 170 12 319 586 373 675 8.87e-19 91.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene025691.t1 AT2G40940 76.294 599 137 1 2 595 1 599 0.0 922
MS.gene025691.t1 AT1G66340 70.579 622 174 2 2 618 1 618 0.0 886
MS.gene025691.t1 AT3G23150 39.688 577 306 15 5 557 32 590 1.00e-114 356
MS.gene025691.t1 AT3G23150 39.863 582 308 15 5 562 32 595 5.26e-114 359
MS.gene025691.t1 AT3G04580 35.692 636 377 14 4 618 26 650 4.40e-108 343
MS.gene025691.t1 AT3G04580 35.692 636 377 14 4 618 26 650 4.40e-108 343
MS.gene025691.t1 AT1G04310 35.992 514 299 11 5 492 34 543 2.44e-86 283
MS.gene025691.t1 AT1G04310 35.992 514 299 11 5 492 34 543 2.44e-86 283
MS.gene025691.t1 AT5G10720 32.500 320 186 8 318 614 339 651 7.66e-38 150
MS.gene025691.t1 AT2G17820 32.246 276 161 5 309 562 472 743 3.79e-35 142
MS.gene025691.t1 AT1G27320 30.421 309 184 4 299 577 410 717 6.10e-35 142
MS.gene025691.t1 AT5G35750 30.405 296 165 7 330 588 578 869 4.36e-31 130
MS.gene025691.t1 AT2G01830 29.545 308 165 5 333 592 466 769 3.15e-30 127
MS.gene025691.t1 AT2G01830 29.545 308 165 5 333 592 455 758 3.26e-30 127
MS.gene025691.t1 AT2G01830 29.545 308 165 5 333 592 443 746 3.29e-30 127
MS.gene025691.t1 AT2G01830 29.545 308 165 5 333 592 443 746 3.29e-30 127
MS.gene025691.t1 AT2G01830 29.545 308 165 5 333 592 443 746 3.29e-30 127
MS.gene025691.t1 AT2G01830 29.545 308 165 5 333 592 443 746 3.29e-30 127
MS.gene025691.t1 AT2G47430 27.491 291 167 10 329 581 385 669 1.36e-16 84.7
MS.gene025691.t1 AT4G16250 23.577 246 161 8 321 562 914 1136 6.37e-11 66.2

Find 140 sgRNAs with CRISPR-Local

Find 260 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCTTTCACATGCTGCTATTT+TGG 0.127774 7.1:+5081983 MS.gene025691:CDS
GCTCAGGCCAATCATTAATT+TGG 0.179813 7.1:-5080804 None:intergenic
TTTGTGCAGGTTAAGGATTC+TGG 0.190806 7.1:+5082932 MS.gene025691:intron
AATCAACCTTCATGGTGTTT+TGG 0.215357 7.1:+5082313 MS.gene025691:CDS
CTGCTTTCTTTCCATATAGA+TGG 0.223591 7.1:+5080161 MS.gene025691:CDS
GTGGAGTTGGGTAGGACTTT+AGG 0.238818 7.1:+5080526 MS.gene025691:CDS
GATGGGTTCTTATGCAGTTT+GGG 0.252158 7.1:+5080179 MS.gene025691:CDS
AGCATTGTCATCACTTCTTT+TGG 0.253771 7.1:+5082154 MS.gene025691:CDS
CGCCAATCCTGTAAGGATTC+TGG 0.273695 7.1:-5082622 None:intergenic
TTGGACTAGCTATTTGTAAA+AGG 0.274567 7.1:+5083047 MS.gene025691:CDS
GCTCTTCCGCCTTGTTCTTA+AGG 0.299367 7.1:-5080387 None:intergenic
AGATGGGTTCTTATGCAGTT+TGG 0.302430 7.1:+5080178 MS.gene025691:CDS
ACAAGGCGGAAGAGCTTGAT+AGG 0.308682 7.1:+5080395 MS.gene025691:CDS
TGCAAAACCAGAATCCTTAC+AGG 0.315260 7.1:+5082615 MS.gene025691:CDS
TGCATAAGAACCCATCTATA+TGG 0.316824 7.1:-5080172 None:intergenic
CAACATTCTCACATGTCTTC+CGG 0.319637 7.1:-5080449 None:intergenic
ATCTCATGGGTGGGCACATA+TGG 0.329280 7.1:+5083212 MS.gene025691:CDS
TAATGATTGGCCTGAGCTTT+CGG 0.339005 7.1:+5080810 MS.gene025691:CDS
CACCTGAAGTTGTTGCGGTT+CGG 0.344532 7.1:+5080755 MS.gene025691:CDS
CAAATTTCCAAATTAATGAT+TGG 0.349017 7.1:+5080797 MS.gene025691:CDS
TCTAGCAGTGGTTCAGGTCT+TGG 0.350863 7.1:+5083028 MS.gene025691:CDS
ATTGAAGAGTAGTAATGTTT+TGG 0.359573 7.1:+5082220 MS.gene025691:CDS
CTGAAGACTTCATTGACAAT+AGG 0.366052 7.1:-5080658 None:intergenic
GAATGTTGACTCATGAAATT+AGG 0.375510 7.1:+5080464 MS.gene025691:CDS
GAGAGCGAGGGTCACGATAA+AGG 0.377013 7.1:+5083238 MS.gene025691:CDS
ACCTGAAGTTGTTGCGGTTC+GGG 0.378789 7.1:+5080756 MS.gene025691:CDS
CTCTCGCCGAGCTAAATCTA+AGG 0.393829 7.1:-5082051 None:intergenic
ATGGCATGAGTAGGTAGATC+AGG 0.413426 7.1:-5082496 None:intergenic
AGATTCAAACCACTTCTTGA+TGG 0.415200 7.1:-5080574 None:intergenic
GTTCGATCTAGCAGTGGTTC+AGG 0.425531 7.1:+5083022 MS.gene025691:CDS
CTCCACTTCCACTATATGCT+TGG 0.434484 7.1:-5083339 None:intergenic
AAATTAGGAGCACTCTTGAT+AGG 0.435699 7.1:+5080479 MS.gene025691:CDS
GGGGCAAGAATTAAAGTAAT+GGG 0.436802 7.1:-5082475 None:intergenic
GAGTTGATCCCGGGCTCGCA+TGG 0.439303 7.1:-5082012 None:intergenic
TACTTGACAAGAAGTTCATC+TGG 0.439756 7.1:-5080061 None:intergenic
AGCTCGGCGAGAGGCTGAAA+TGG 0.447274 7.1:+5082061 MS.gene025691:CDS
GCTACATTTGTAGTCAAACT+TGG 0.452125 7.1:+5083268 MS.gene025691:CDS
GGGTAGGACTTTAGGATTGG+AGG 0.452722 7.1:+5080534 MS.gene025691:CDS
ACCCGAACCGCAACAACTTC+AGG 0.453206 7.1:-5080757 None:intergenic
GGCCAAGCATATAGTGGAAG+TGG 0.455936 7.1:+5083337 MS.gene025691:CDS
ATTCAGATTTGTAAATCTCA+TGG 0.457675 7.1:+5083198 MS.gene025691:intron
ATTCTTACTCAGGAAGAAAC+CGG 0.461381 7.1:+5080430 MS.gene025691:CDS
CCAAAATAGCAGCATGTGAA+AGG 0.461533 7.1:-5081983 None:intergenic
TTGTTCCATGAGTTGATCCC+GGG 0.464658 7.1:-5082021 None:intergenic
AGCAGAGGCCAAGCATATAG+TGG 0.467264 7.1:+5083331 MS.gene025691:CDS
AGAAGTTCATCTGGAGGATA+AGG 0.468819 7.1:-5080052 None:intergenic
TTGACAATAGGAAGGTTTGT+TGG 0.470136 7.1:-5080646 None:intergenic
AAAGACCACTCTTGTGGAGT+TGG 0.471472 7.1:+5080513 MS.gene025691:CDS
TGGTAGCCTTGAATTAGAAA+TGG 0.472836 7.1:+5082286 MS.gene025691:CDS
GTAGTCAAACTTGGGATTTG+TGG 0.473180 7.1:+5083277 MS.gene025691:CDS
TGCTTTCTTTCCATATAGAT+GGG 0.474314 7.1:+5080162 MS.gene025691:CDS
TTTGTTCCATGAGTTGATCC+CGG 0.480126 7.1:-5082022 None:intergenic
AAGACCACTCTTGTGGAGTT+GGG 0.480183 7.1:+5080514 MS.gene025691:CDS
ACAAAATAAATGAGTTCGAC+AGG 0.487975 7.1:-5080130 None:intergenic
GTTGGGTAGGACTTTAGGAT+TGG 0.493614 7.1:+5080531 MS.gene025691:CDS
TGGAGGAGTCCATGCGAGCC+CGG 0.494071 7.1:+5082003 MS.gene025691:CDS
TGTGGTATACGCATAGCTCT+CGG 0.503245 7.1:-5080685 None:intergenic
TCTATCATAACCCTCTGCTC+TGG 0.509698 7.1:-5082191 None:intergenic
GAACCACTGCTAGATCGAAC+AGG 0.510532 7.1:-5083019 None:intergenic
GGAGGAGTCCATGCGAGCCC+GGG 0.516805 7.1:+5082004 MS.gene025691:CDS
GTTCTTAAGGAACAACTCAC+GGG 0.520997 7.1:-5080374 None:intergenic
AACCAGAATCCTTACAGGAT+TGG 0.521860 7.1:+5082620 MS.gene025691:CDS
TTCAGATTTGTAAATCTCAT+GGG 0.524035 7.1:+5083199 MS.gene025691:intron
TCTGCTTGCAGCTTGATGAT+CGG 0.525516 7.1:-5083314 None:intergenic
AGGAGGTCGCCAATCCTGTA+AGG 0.525729 7.1:-5082629 None:intergenic
AAATGACCATCACTTGATGC+TGG 0.529879 7.1:-5082661 None:intergenic
GGAAGAGCTTGATAGGGAGA+TGG 0.530026 7.1:+5080402 MS.gene025691:CDS
CTACATTTGTAGTCAAACTT+GGG 0.530312 7.1:+5083269 MS.gene025691:CDS
GTGGTATACGCATAGCTCTC+GGG 0.531017 7.1:-5080684 None:intergenic
TGTTCTTAAGGAACAACTCA+CGG 0.533686 7.1:-5080375 None:intergenic
CTGAACTGACTCCAGAGCAG+AGG 0.535510 7.1:+5082180 MS.gene025691:CDS
GATGGGACTTATTCTTACTC+AGG 0.538781 7.1:+5080420 MS.gene025691:CDS
ATGGGTTCTTATGCAGTTTG+GGG 0.539955 7.1:+5080180 MS.gene025691:CDS
TTAACTTATCATGTACAAGT+TGG 0.540061 7.1:+5080613 MS.gene025691:CDS
GATCTGTCCCGACTGGAAGA+TGG 0.542916 7.1:+5082266 MS.gene025691:CDS
TTACTCAATGATGACGACAT+AGG 0.543430 7.1:+5083382 MS.gene025691:CDS
AGGGGCAAGAATTAAAGTAA+TGG 0.544261 7.1:-5082476 None:intergenic
ACTCTGAGACTGAGTAAACT+TGG 0.544636 7.1:-5082993 None:intergenic
TCATTTCTATATACGAGTCC+AGG 0.548157 7.1:+5082678 MS.gene025691:CDS
GAAGAGCTTGATAGGGAGAT+GGG 0.548570 7.1:+5080403 MS.gene025691:CDS
CAATGCTGTCAAATATACTA+AGG 0.548729 7.1:+5082564 MS.gene025691:CDS
CATGGGTGGGCACATATGGA+TGG 0.549664 7.1:+5083216 MS.gene025691:CDS
GCGAGCCCGGGATCAACTCA+TGG 0.550447 7.1:+5082016 MS.gene025691:CDS
AAGGCTACCATCTTCCAGTC+GGG 0.554665 7.1:-5082273 None:intergenic
CAAAATAGCAGCATGTGAAA+GGG 0.558668 7.1:-5081982 None:intergenic
CACTTTCTAGCACTATCAGT+AGG 0.560837 7.1:-5080865 None:intergenic
CTTGATGCTGGATAAAACTC+AGG 0.561674 7.1:-5082649 None:intergenic
CAGGTTAAGGATTCTGGATG+TGG 0.561926 7.1:+5082938 MS.gene025691:intron
CTTGCAGCTTGATGATCGGA+TGG 0.567335 7.1:-5083310 None:intergenic
CAAGGCGGAAGAGCTTGATA+GGG 0.569408 7.1:+5080396 MS.gene025691:CDS
CATCGACAAGCTCCAACTCA+TGG 0.570916 7.1:-5080894 None:intergenic
TGGCATGAGTAGGTAGATCA+GGG 0.573826 7.1:-5082495 None:intergenic
AGATTTGTAAATCTCATGGG+TGG 0.574861 7.1:+5083202 MS.gene025691:intron
ACGTTGCCTTAGATTTAGCT+CGG 0.574999 7.1:+5082045 MS.gene025691:CDS
TGCTGTCAAATATACTAAGG+AGG 0.577420 7.1:+5082567 MS.gene025691:CDS
GCTGTCAAATATACTAAGGA+GGG 0.577474 7.1:+5082568 MS.gene025691:CDS
TATTCTAAAGACCACTCTTG+TGG 0.580698 7.1:+5080507 MS.gene025691:CDS
GTAAACTTGGTAAAGAGATG+TGG 0.583173 7.1:-5082980 None:intergenic
CTACTGATAGTGCTAGAAAG+TGG 0.585604 7.1:+5080866 MS.gene025691:CDS
GCTAGGATAAGACCTCTTGT+CGG 0.586111 7.1:+5080721 MS.gene025691:CDS
TGTTCTAGATCTGTCCCGAC+TGG 0.586169 7.1:+5082259 MS.gene025691:CDS
CACACACTTGTCCACTTGCT+AGG 0.588144 7.1:+5080704 MS.gene025691:CDS
TTTCATGATTCATGACTGCA+AGG 0.589191 7.1:-5082106 None:intergenic
CCACTCTTGTGGAGTTGGGT+AGG 0.594476 7.1:+5080518 MS.gene025691:CDS
GATTTGTAAATCTCATGGGT+GGG 0.596709 7.1:+5083203 MS.gene025691:intron
ACTTTCTAGCACTATCAGTA+GGG 0.597780 7.1:-5080864 None:intergenic
AGACTTCATTGACAATAGGA+AGG 0.597850 7.1:-5080654 None:intergenic
GTAAGTGCTTAAATCTAGCA+AGG 0.598885 7.1:-5083363 None:intergenic
CAAGGCTACCATCTTCCAGT+CGG 0.599285 7.1:-5082274 None:intergenic
TGAACTGACTCCAGAGCAGA+GGG 0.605152 7.1:+5082181 MS.gene025691:CDS
TGAGTTGTTCCTTAAGAACA+AGG 0.610418 7.1:+5080378 MS.gene025691:CDS
GCACATATGGATGGAGAGCG+AGG 0.610844 7.1:+5083225 MS.gene025691:CDS
GGCACATATCTTCCGACAAG+AGG 0.613814 7.1:-5080733 None:intergenic
AAGAGATGTGGAATATCTTG+TGG 0.615014 7.1:-5082968 None:intergenic
AGAGGTCTTATCCTAGCAAG+TGG 0.615685 7.1:-5080715 None:intergenic
TCATCACCGATGGCATGAGT+AGG 0.616501 7.1:-5082505 None:intergenic
CTTAGATTTAGCTCGGCGAG+AGG 0.619358 7.1:+5082052 MS.gene025691:CDS
AGCACACGACACTTTAGCGA+TGG 0.621416 7.1:-5080287 None:intergenic
AAAGTGGCGAGACCATGAGT+TGG 0.625466 7.1:+5080882 MS.gene025691:CDS
AAATTTGACAAATGTAGAAG+CGG 0.631499 7.1:-5080781 None:intergenic
GATCATCAAGCTGCAAGCAG+AGG 0.631663 7.1:+5083316 MS.gene025691:CDS
CAAGCATATAGTGGAAGTGG+AGG 0.635632 7.1:+5083340 MS.gene025691:CDS
ATGCCATCGGTGATGAAAAG+CGG 0.635694 7.1:+5082512 MS.gene025691:CDS
TGTGCCACCTGAAGTTGTTG+CGG 0.636371 7.1:+5080750 MS.gene025691:CDS
ATGAACAAGCATAAGTGCAG+TGG 0.643228 7.1:-5080323 None:intergenic
CCTACCCAACTCCACAAGAG+TGG 0.646184 7.1:-5080518 None:intergenic
GATCTACCTACTCATGCCAT+CGG 0.647848 7.1:+5082499 MS.gene025691:CDS
CCTCTCCCAAAACACCATGA+AGG 0.651300 7.1:-5082319 None:intergenic
CACATATGGATGGAGAGCGA+GGG 0.654671 7.1:+5083226 MS.gene025691:CDS
GGACCTGTTCGATCTAGCAG+TGG 0.657911 7.1:+5083016 MS.gene025691:CDS
CGAACCGCAACAACTTCAGG+TGG 0.664993 7.1:-5080754 None:intergenic
CTGTGGATGCCATCAAGAAG+TGG 0.665478 7.1:+5080565 MS.gene025691:CDS
TTGACAAGAAGTTCATCTGG+AGG 0.684589 7.1:-5080058 None:intergenic
GATGCTGGATAAAACTCAGG+AGG 0.685050 7.1:-5082646 None:intergenic
CTAGCAAGTGGACAAGTGTG+TGG 0.685475 7.1:-5080703 None:intergenic
AATGCTATAATTGCATGCAT+CGG 0.690508 7.1:-5082137 None:intergenic
GGCATGAGTAGGTAGATCAG+GGG 0.696928 7.1:-5082494 None:intergenic
AAGTTTACTCAGTCTCAGAG+TGG 0.708425 7.1:+5082995 MS.gene025691:CDS
GTTGTTCCTTAAGAACAAGG+CGG 0.762407 7.1:+5080381 MS.gene025691:CDS
GATTGGAGGAATGTGCACTG+TGG 0.783064 7.1:+5080548 MS.gene025691:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTGATTTCTTTTATTTTAT+TGG + chr7.1:5080936-5080955 MS.gene025691:intron 10.0%
!! AATAGTTGAAAATTAGGAAA+TGG + chr7.1:5081120-5081139 MS.gene025691:intron 20.0%
!! AATTCAATCACATTAACATA+TGG - chr7.1:5082740-5082759 None:intergenic 20.0%
!! AATTTCAAACACAGTTAATA+TGG - chr7.1:5081786-5081805 None:intergenic 20.0%
!! ATACGGAATAAAAAATATTC+AGG - chr7.1:5080976-5080995 None:intergenic 20.0%
!! CAAATTTCCAAATTAATGAT+TGG + chr7.1:5080797-5080816 MS.gene025691:CDS 20.0%
!! GTATTAAATACAAATATCAC+AGG - chr7.1:5081328-5081347 None:intergenic 20.0%
!! TACGGAATAAAAAATATTCA+GGG - chr7.1:5080975-5080994 None:intergenic 20.0%
!! TTAATATGCATTTCACATAA+GGG - chr7.1:5083122-5083141 None:intergenic 20.0%
!!! AAACTTTTCATTCAATTGTA+TGG + chr7.1:5081724-5081743 MS.gene025691:intron 20.0%
!!! AAAGTTTCAGGTATTTAATT+TGG - chr7.1:5081711-5081730 None:intergenic 20.0%
! AAATAACTATAAAGCCCAAA+TGG - chr7.1:5081160-5081179 None:intergenic 25.0%
! AAATTTACAACAAATGTGTG+TGG + chr7.1:5081626-5081645 MS.gene025691:intron 25.0%
! AAATTTGACAAATGTAGAAG+CGG - chr7.1:5080784-5080803 None:intergenic 25.0%
! AAGTCGATAACATAATGAAA+AGG - chr7.1:5082840-5082859 None:intergenic 25.0%
! AATAGAAAACAACGGAAATA+CGG - chr7.1:5080993-5081012 None:intergenic 25.0%
! AATTTACAACAAATGTGTGT+GGG + chr7.1:5081627-5081646 MS.gene025691:intron 25.0%
! ACAATTGAATGAAAAGTTTC+AGG - chr7.1:5081723-5081742 None:intergenic 25.0%
! ACTAAATTTAAGAACGAGAT+TGG + chr7.1:5081514-5081533 MS.gene025691:intron 25.0%
! AGAAAAGGAATAGAAAACAA+CGG - chr7.1:5081001-5081020 None:intergenic 25.0%
! ATTCAGATTTGTAAATCTCA+TGG + chr7.1:5083198-5083217 MS.gene025691:intron 25.0%
! ATTTCACATAAGGGTAATAA+TGG - chr7.1:5083113-5083132 None:intergenic 25.0%
! CAACTGTTAGAAATTAATCT+AGG + chr7.1:5082870-5082889 MS.gene025691:intron 25.0%
! CTTAAGTAAAGAACCATATT+AGG + chr7.1:5081221-5081240 MS.gene025691:intron 25.0%
! GAATAAAACACTTAAAAGTC+AGG - chr7.1:5081654-5081673 None:intergenic 25.0%
! GCATAGAATAGTTGAAAATT+AGG + chr7.1:5081114-5081133 MS.gene025691:intron 25.0%
! GTTAATATGCATTTCACATA+AGG - chr7.1:5083123-5083142 None:intergenic 25.0%
! GTTAATGTGATTGAATTCTT+GGG + chr7.1:5082743-5082762 MS.gene025691:intron 25.0%
! GTTTAAGCAATCAAAAGAAA+AGG - chr7.1:5081016-5081035 None:intergenic 25.0%
! TGTTAATGTGATTGAATTCT+TGG + chr7.1:5082742-5082761 MS.gene025691:intron 25.0%
! TTAACTTATCATGTACAAGT+TGG + chr7.1:5080613-5080632 MS.gene025691:CDS 25.0%
! TTCAGATTTGTAAATCTCAT+GGG + chr7.1:5083199-5083218 MS.gene025691:intron 25.0%
!! ATTGAAGAGTAGTAATGTTT+TGG + chr7.1:5082220-5082239 MS.gene025691:CDS 25.0%
!! CAACTCATTTTATAAATCTG+TGG + chr7.1:5080224-5080243 MS.gene025691:CDS 25.0%
!!! GGTATTTAATTTGGTCTTTT+CGG - chr7.1:5081702-5081721 None:intergenic 25.0%
!!! TTTTTGCCATTTCTAATTCA+AGG - chr7.1:5082295-5082314 None:intergenic 25.0%
AAGAACGAGATTGGAAAAAT+GGG + chr7.1:5081523-5081542 MS.gene025691:intron 30.0%
AATGCTATAATTGCATGCAT+CGG - chr7.1:5082140-5082159 None:intergenic 30.0%
ACAAAATAAATGAGTTCGAC+AGG - chr7.1:5080133-5080152 None:intergenic 30.0%
ACTAGCTATTTGTAAAAGGT+AGG + chr7.1:5083051-5083070 MS.gene025691:intron 30.0%
ATATCAGCACTAGAAAATGT+TGG - chr7.1:5081832-5081851 None:intergenic 30.0%
CAATACATAAATGCTGTTCA+TGG - chr7.1:5082393-5082412 None:intergenic 30.0%
CAATGCTGTCAAATATACTA+AGG + chr7.1:5082564-5082583 MS.gene025691:CDS 30.0%
CTACATTTGTAGTCAAACTT+GGG + chr7.1:5083269-5083288 MS.gene025691:CDS 30.0%
CTAGCTATTTGTAAAAGGTA+GGG + chr7.1:5083052-5083071 MS.gene025691:intron 30.0%
GAAAAGAAAACGACATAAGA+TGG - chr7.1:5081399-5081418 None:intergenic 30.0%
GAAAAGGTAGAGATATCTTT+GGG - chr7.1:5082824-5082843 None:intergenic 30.0%
GGCAAAAAGTTATGCAATTA+TGG + chr7.1:5080831-5080850 MS.gene025691:CDS 30.0%
TAAGAACGAGATTGGAAAAA+TGG + chr7.1:5081522-5081541 MS.gene025691:intron 30.0%
TGAAAAGGTAGAGATATCTT+TGG - chr7.1:5082825-5082844 None:intergenic 30.0%
TGCTTTCTTTCCATATAGAT+GGG + chr7.1:5080162-5080181 MS.gene025691:CDS 30.0%
! AAATCAAAATTAGACTGGCT+CGG - chr7.1:5081436-5081455 None:intergenic 30.0%
! AACTAAATGGATTCAGCATA+CGG - chr7.1:5081943-5081962 None:intergenic 30.0%
! AATCCATTTAGTTTCCATAC+AGG + chr7.1:5081950-5081969 MS.gene025691:intron 30.0%
! CATTCAATTGTATGGCTTTT+AGG + chr7.1:5081732-5081751 MS.gene025691:intron 30.0%
! TGCTTTTCTATTGTTAATGC+AGG + chr7.1:5082411-5082430 MS.gene025691:intron 30.0%
! TTTTGGCCATTGAAGATATA+TGG + chr7.1:5081453-5081472 MS.gene025691:intron 30.0%
!! GAATGTTGACTCATGAAATT+AGG + chr7.1:5080464-5080483 MS.gene025691:CDS 30.0%
!! TAATTTGGTCTTTTCGGATT+AGG - chr7.1:5081696-5081715 None:intergenic 30.0%
!! TAGTTATTTCTCAACCATCA+AGG + chr7.1:5081171-5081190 MS.gene025691:intron 30.0%
!! TTGGACTAGCTATTTGTAAA+AGG + chr7.1:5083047-5083066 MS.gene025691:CDS 30.0%
!!! AACATTTTCTAGTGCTGATA+TGG + chr7.1:5081831-5081850 MS.gene025691:intron 30.0%
!!! AGCCAGTCTAATTTTGATTT+TGG + chr7.1:5081436-5081455 MS.gene025691:intron 30.0%
!!! AGTTTTTTCACAGATGCTAT+AGG - chr7.1:5082454-5082473 None:intergenic 30.0%
AACCATATTAGGTATGCATG+TGG + chr7.1:5081232-5081251 MS.gene025691:intron 35.0%
AAGAGATGTGGAATATCTTG+TGG - chr7.1:5082971-5082990 None:intergenic 35.0%
AATAAGTGGCTAAAAAAGGG+AGG + chr7.1:5081281-5081300 MS.gene025691:intron 35.0%
AGAACGAGATTGGAAAAATG+GGG + chr7.1:5081524-5081543 MS.gene025691:intron 35.0%
AGACTTCATTGACAATAGGA+AGG - chr7.1:5080657-5080676 None:intergenic 35.0%
AGATTCAAACCACTTCTTGA+TGG - chr7.1:5080577-5080596 None:intergenic 35.0%
AGATTTGTAAATCTCATGGG+TGG + chr7.1:5083202-5083221 MS.gene025691:intron 35.0%
AGGAAATGGCTATCAATCAT+TGG + chr7.1:5081134-5081153 MS.gene025691:intron 35.0%
AGGGGCAAGAATTAAAGTAA+TGG - chr7.1:5082479-5082498 None:intergenic 35.0%
ATAAGTGGCTAAAAAAGGGA+GGG + chr7.1:5081282-5081301 MS.gene025691:intron 35.0%
ATGGCAAAAATCAACCTTCA+TGG + chr7.1:5082305-5082324 MS.gene025691:CDS 35.0%
ATGTGTAAACTATATCGCAG+AGG - chr7.1:5081371-5081390 None:intergenic 35.0%
ATTCTTACTCAGGAAGAAAC+CGG + chr7.1:5080430-5080449 MS.gene025691:CDS 35.0%
CAAAATAGCAGCATGTGAAA+GGG - chr7.1:5081985-5082004 None:intergenic 35.0%
CCCAATAAGTGGCTAAAAAA+GGG + chr7.1:5081278-5081297 MS.gene025691:intron 35.0%
CTACCTGTATGGAAACTAAA+TGG - chr7.1:5081956-5081975 None:intergenic 35.0%
CTATCAATCATTGGCCATTT+GGG + chr7.1:5081143-5081162 MS.gene025691:intron 35.0%
CTCAATATCAAGACTGAGAT+AGG + chr7.1:5081479-5081498 MS.gene025691:intron 35.0%
CTGAAGACTTCATTGACAAT+AGG - chr7.1:5080661-5080680 None:intergenic 35.0%
CTGCTTTCTTTCCATATAGA+TGG + chr7.1:5080161-5080180 MS.gene025691:CDS 35.0%
CTTTCCTAGAAATGTAGGTA+TGG - chr7.1:5082799-5082818 None:intergenic 35.0%
GATTTGTAAATCTCATGGGT+GGG + chr7.1:5083203-5083222 MS.gene025691:intron 35.0%
GCTACATTTGTAGTCAAACT+TGG + chr7.1:5083268-5083287 MS.gene025691:CDS 35.0%
GCTGTCAAATATACTAAGGA+GGG + chr7.1:5082568-5082587 MS.gene025691:CDS 35.0%
GGCCAAAATCAAAATTAGAC+TGG - chr7.1:5081441-5081460 None:intergenic 35.0%
GGGGCAAGAATTAAAGTAAT+GGG - chr7.1:5082478-5082497 None:intergenic 35.0%
GGTTCTTTACTTAAGTCACT+AGG - chr7.1:5081216-5081235 None:intergenic 35.0%
GTAAACTTGGTAAAGAGATG+TGG - chr7.1:5082983-5083002 None:intergenic 35.0%
GTAAGTGCTTAAATCTAGCA+AGG - chr7.1:5083366-5083385 None:intergenic 35.0%
TACTTGACAAGAAGTTCATC+TGG - chr7.1:5080064-5080083 None:intergenic 35.0%
TATTCTGTCTTCTACCTTGA+TGG - chr7.1:5081188-5081207 None:intergenic 35.0%
TCATCCATACCTACATTTCT+AGG + chr7.1:5082792-5082811 MS.gene025691:intron 35.0%
TCATTTCTATATACGAGTCC+AGG + chr7.1:5082678-5082697 MS.gene025691:CDS 35.0%
TCCCAATAAGTGGCTAAAAA+AGG + chr7.1:5081277-5081296 MS.gene025691:intron 35.0%
TCTGCGATATAGTTTACACA+TGG + chr7.1:5081370-5081389 MS.gene025691:intron 35.0%
TGAGTTGTTCCTTAAGAACA+AGG + chr7.1:5080378-5080397 MS.gene025691:CDS 35.0%
TGCATAAGAACCCATCTATA+TGG - chr7.1:5080175-5080194 None:intergenic 35.0%
TGCTGTCAAATATACTAAGG+AGG + chr7.1:5082567-5082586 MS.gene025691:CDS 35.0%
TGTTCTTAAGGAACAACTCA+CGG - chr7.1:5080378-5080397 None:intergenic 35.0%
TTGACAATAGGAAGGTTTGT+TGG - chr7.1:5080649-5080668 None:intergenic 35.0%
TTTCATGATTCATGACTGCA+AGG - chr7.1:5082109-5082128 None:intergenic 35.0%
! AATCAACCTTCATGGTGTTT+TGG + chr7.1:5082313-5082332 MS.gene025691:CDS 35.0%
! ACTTTCTAGCACTATCAGTA+GGG - chr7.1:5080867-5080886 None:intergenic 35.0%
! AGCATTGTCATCACTTCTTT+TGG + chr7.1:5082154-5082173 MS.gene025691:CDS 35.0%
! ATCAACCTTCATGGTGTTTT+GGG + chr7.1:5082314-5082333 MS.gene025691:CDS 35.0%
! CAGACACTTTTGAATGTTGT+GGG + chr7.1:5082541-5082560 MS.gene025691:CDS 35.0%
! TATTCTAAAGACCACTCTTG+TGG + chr7.1:5080507-5080526 MS.gene025691:CDS 35.0%
! TGGTAGCCTTGAATTAGAAA+TGG + chr7.1:5082286-5082305 MS.gene025691:CDS 35.0%
! TTACTCAATGATGACGACAT+AGG + chr7.1:5083382-5083401 MS.gene025691:CDS 35.0%
! TTTTATCCAGCATCAAGTGA+TGG + chr7.1:5082655-5082674 MS.gene025691:CDS 35.0%
!! AAATTAGGAGCACTCTTGAT+AGG + chr7.1:5080479-5080498 MS.gene025691:CDS 35.0%
!! ATGTTGGCGACATTTTGAAA+CGG - chr7.1:5081816-5081835 None:intergenic 35.0%
!! CTATTGCTGTGAACTTGTTT+TGG + chr7.1:5081083-5081102 MS.gene025691:intron 35.0%
!! GGTTTTAACACTCAACAGAT+CGG - chr7.1:5080356-5080375 None:intergenic 35.0%
!! GTTTTAACACTCAACAGATC+GGG - chr7.1:5080355-5080374 None:intergenic 35.0%
!!! CCCTTTTTTAGCCACTTATT+GGG - chr7.1:5081281-5081300 None:intergenic 35.0%
!!! TCCCTTTTTTAGCCACTTAT+TGG - chr7.1:5081282-5081301 None:intergenic 35.0%
!!! TGTGAACTTGTTTTGGAGTT+TGG + chr7.1:5081090-5081109 MS.gene025691:intron 35.0%
AAATGACCATCACTTGATGC+TGG - chr7.1:5082664-5082683 None:intergenic 40.0%
AACCAGAATCCTTACAGGAT+TGG + chr7.1:5082620-5082639 MS.gene025691:CDS 40.0%
AAGTTTACTCAGTCTCAGAG+TGG + chr7.1:5082995-5083014 MS.gene025691:CDS 40.0%
AATCTGATGCAGATCTGTCT+AGG + chr7.1:5081601-5081620 MS.gene025691:intron 40.0%
ACGTTGCCTTAGATTTAGCT+CGG + chr7.1:5082045-5082064 MS.gene025691:CDS 40.0%
AGAAGTTCATCTGGAGGATA+AGG - chr7.1:5080055-5080074 None:intergenic 40.0%
AGACTCAGAACAGAACTTAC+AGG - chr7.1:5081061-5081080 None:intergenic 40.0%
ATCCTTAACCTGCACAAAGA+AGG - chr7.1:5082930-5082949 None:intergenic 40.0%
ATCCTTCTTTGTGCAGGTTA+AGG + chr7.1:5082925-5082944 MS.gene025691:intron 40.0%
ATGAACAAGCATAAGTGCAG+TGG - chr7.1:5080326-5080345 None:intergenic 40.0%
ATGGGTTCTTATGCAGTTTG+GGG + chr7.1:5080180-5080199 MS.gene025691:CDS 40.0%
CAACATTCTCACATGTCTTC+CGG - chr7.1:5080452-5080471 None:intergenic 40.0%
CCAAAATAGCAGCATGTGAA+AGG - chr7.1:5081986-5082005 None:intergenic 40.0%
CTCCACATGCATACCTAATA+TGG - chr7.1:5081237-5081256 None:intergenic 40.0%
CTGCACAAAGAAGGATGTTT+GGG - chr7.1:5082921-5082940 None:intergenic 40.0%
CTTGATGCTGGATAAAACTC+AGG - chr7.1:5082652-5082671 None:intergenic 40.0%
GAGCCACCATATATCTTCAA+TGG - chr7.1:5081462-5081481 None:intergenic 40.0%
GATGGGACTTATTCTTACTC+AGG + chr7.1:5080420-5080439 MS.gene025691:CDS 40.0%
GCTATCAATCATTGGCCATT+TGG + chr7.1:5081142-5081161 MS.gene025691:intron 40.0%
GCTCAGGCCAATCATTAATT+TGG - chr7.1:5080807-5080826 None:intergenic 40.0%
GTAGTCAAACTTGGGATTTG+TGG + chr7.1:5083277-5083296 MS.gene025691:CDS 40.0%
GTTCTTAAGGAACAACTCAC+GGG - chr7.1:5080377-5080396 None:intergenic 40.0%
GTTGTTCCTTAAGAACAAGG+CGG + chr7.1:5080381-5080400 MS.gene025691:CDS 40.0%
TATCAAGACTGAGATAGGCT+CGG + chr7.1:5081484-5081503 MS.gene025691:intron 40.0%
TGCAAAACCAGAATCCTTAC+AGG + chr7.1:5082615-5082634 MS.gene025691:CDS 40.0%
TGCACAAAGAAGGATGTTTG+GGG - chr7.1:5082920-5082939 None:intergenic 40.0%
TGGCCATTGAAGATATATGG+TGG + chr7.1:5081456-5081475 MS.gene025691:intron 40.0%
TTGACAAGAAGTTCATCTGG+AGG - chr7.1:5080061-5080080 None:intergenic 40.0%
TTTGTGCAGGTTAAGGATTC+TGG + chr7.1:5082932-5082951 MS.gene025691:intron 40.0%
! AGATGGGTTCTTATGCAGTT+TGG + chr7.1:5080178-5080197 MS.gene025691:CDS 40.0%
! CACTTTCTAGCACTATCAGT+AGG - chr7.1:5080868-5080887 None:intergenic 40.0%
! CTACTGATAGTGCTAGAAAG+TGG + chr7.1:5080866-5080885 MS.gene025691:CDS 40.0%
! GATGGGTTCTTATGCAGTTT+GGG + chr7.1:5080179-5080198 MS.gene025691:CDS 40.0%
! GCAGACACTTTTGAATGTTG+TGG + chr7.1:5082540-5082559 MS.gene025691:CDS 40.0%
! GGGGCTTTTATTGTTCTATG+TGG + chr7.1:5080199-5080218 MS.gene025691:CDS 40.0%
! TAAATGGATTCAGCATACGG+AGG - chr7.1:5081940-5081959 None:intergenic 40.0%
! TAACTTTTTGCCGAAAGCTC+AGG - chr7.1:5080823-5080842 None:intergenic 40.0%
!! ACTCTGAGACTGAGTAAACT+TGG - chr7.1:5082996-5083015 None:intergenic 40.0%
!! CCTTTCACATGCTGCTATTT+TGG + chr7.1:5081983-5082002 MS.gene025691:CDS 40.0%
!! GGTAATAATGGTGACTTGCT+AGG - chr7.1:5083101-5083120 None:intergenic 40.0%
!! TAATGATTGGCCTGAGCTTT+CGG + chr7.1:5080810-5080829 MS.gene025691:CDS 40.0%
!! TTTGGTCTTTTCGGATTAGG+AGG - chr7.1:5081693-5081712 None:intergenic 40.0%
!! TTTGTTCCATGAGTTGATCC+CGG - chr7.1:5082025-5082044 None:intergenic 40.0%
!!! TTCACATGCTGCTATTTTGG+AGG + chr7.1:5081986-5082005 MS.gene025691:CDS 40.0%
AAAGACCACTCTTGTGGAGT+TGG + chr7.1:5080513-5080532 MS.gene025691:CDS 45.0%
AAGACCACTCTTGTGGAGTT+GGG + chr7.1:5080514-5080533 MS.gene025691:CDS 45.0%
ACGAGTCCAGGTTATGACTT+TGG + chr7.1:5082690-5082709 MS.gene025691:intron 45.0%
AGCCACTTATTGGGATTCAG+CGG - chr7.1:5081272-5081291 None:intergenic 45.0%
ATCAAGACTGAGATAGGCTC+GGG + chr7.1:5081485-5081504 MS.gene025691:intron 45.0%
ATGCCATCGGTGATGAAAAG+CGG + chr7.1:5082512-5082531 MS.gene025691:CDS 45.0%
ATGGCATGAGTAGGTAGATC+AGG - chr7.1:5082499-5082518 None:intergenic 45.0%
CAGGTTAAGGATTCTGGATG+TGG + chr7.1:5082938-5082957 MS.gene025691:intron 45.0%
CCAAACATCCTTCTTTGTGC+AGG + chr7.1:5082919-5082938 MS.gene025691:intron 45.0%
CCTGCACAAAGAAGGATGTT+TGG - chr7.1:5082922-5082941 None:intergenic 45.0%
CTCCACTTCCACTATATGCT+TGG - chr7.1:5083342-5083361 None:intergenic 45.0%
GAAGAGCTTGATAGGGAGAT+GGG + chr7.1:5080403-5080422 MS.gene025691:CDS 45.0%
GAGATGCCAAAGTCATAACC+TGG - chr7.1:5082699-5082718 None:intergenic 45.0%
GATCTACCTACTCATGCCAT+CGG + chr7.1:5082499-5082518 MS.gene025691:CDS 45.0%
GATGCTGGATAAAACTCAGG+AGG - chr7.1:5082649-5082668 None:intergenic 45.0%
GCTAGGATAAGACCTCTTGT+CGG + chr7.1:5080721-5080740 MS.gene025691:CDS 45.0%
GGGCTCTTTCCTAGAAATGT+AGG - chr7.1:5082804-5082823 None:intergenic 45.0%
TCTATCATAACCCTCTGCTC+TGG - chr7.1:5082194-5082213 None:intergenic 45.0%
TGGCATGAGTAGGTAGATCA+GGG - chr7.1:5082498-5082517 None:intergenic 45.0%
TGTCGATGTTGTTGCAGATC+AGG + chr7.1:5080909-5080928 MS.gene025691:intron 45.0%
TGTGGTATACGCATAGCTCT+CGG - chr7.1:5080688-5080707 None:intergenic 45.0%
! AGAGGTCTTATCCTAGCAAG+TGG - chr7.1:5080718-5080737 None:intergenic 45.0%
! CAAGCATATAGTGGAAGTGG+AGG + chr7.1:5083340-5083359 MS.gene025691:CDS 45.0%
! TCTGCTTGCAGCTTGATGAT+CGG - chr7.1:5083317-5083336 None:intergenic 45.0%
!! GTTGGGTAGGACTTTAGGAT+TGG + chr7.1:5080531-5080550 MS.gene025691:CDS 45.0%
!! TTGTTCCATGAGTTGATCCC+GGG - chr7.1:5082024-5082043 None:intergenic 45.0%
AAAGTGGCGAGACCATGAGT+TGG + chr7.1:5080882-5080901 MS.gene025691:CDS 50.0%
AAGGCTACCATCTTCCAGTC+GGG - chr7.1:5082276-5082295 None:intergenic 50.0%
AAGGGCAACTGCTACCTGTA+TGG - chr7.1:5081967-5081986 None:intergenic 50.0%
ACAAGGCGGAAGAGCTTGAT+AGG + chr7.1:5080395-5080414 MS.gene025691:CDS 50.0%
ACCTGAAGTTGTTGCGGTTC+GGG + chr7.1:5080756-5080775 MS.gene025691:CDS 50.0%
AGCACACGACACTTTAGCGA+TGG - chr7.1:5080290-5080309 None:intergenic 50.0%
AGCAGAGGCCAAGCATATAG+TGG + chr7.1:5083331-5083350 MS.gene025691:CDS 50.0%
ATCTCATGGGTGGGCACATA+TGG + chr7.1:5083212-5083231 MS.gene025691:CDS 50.0%
CAAGGCGGAAGAGCTTGATA+GGG + chr7.1:5080396-5080415 MS.gene025691:CDS 50.0%
CAAGGCTACCATCTTCCAGT+CGG - chr7.1:5082277-5082296 None:intergenic 50.0%
CAATCATGTCCCCACATCTG+AGG - chr7.1:5081877-5081896 None:intergenic 50.0%
CACACACTTGTCCACTTGCT+AGG + chr7.1:5080704-5080723 MS.gene025691:CDS 50.0%
CACATATGGATGGAGAGCGA+GGG + chr7.1:5083226-5083245 MS.gene025691:CDS 50.0%
CACCTGAAGTTGTTGCGGTT+CGG + chr7.1:5080755-5080774 MS.gene025691:CDS 50.0%
CATCGACAAGCTCCAACTCA+TGG - chr7.1:5080897-5080916 None:intergenic 50.0%
CCTCTCCCAAAACACCATGA+AGG - chr7.1:5082322-5082341 None:intergenic 50.0%
CGCCAATCCTGTAAGGATTC+TGG - chr7.1:5082625-5082644 None:intergenic 50.0%
CTAGCAAGTGGACAAGTGTG+TGG - chr7.1:5080706-5080725 None:intergenic 50.0%
CTCACATGCACCTCAGATGT+GGG + chr7.1:5081864-5081883 MS.gene025691:intron 50.0%
CTCTCGCCGAGCTAAATCTA+AGG - chr7.1:5082054-5082073 None:intergenic 50.0%
CTGTGGATGCCATCAAGAAG+TGG + chr7.1:5080565-5080584 MS.gene025691:CDS 50.0%
GAACCACTGCTAGATCGAAC+AGG - chr7.1:5083022-5083041 None:intergenic 50.0%
GATCATCAAGCTGCAAGCAG+AGG + chr7.1:5083316-5083335 MS.gene025691:CDS 50.0%
GATTGGAGGAATGTGCACTG+TGG + chr7.1:5080548-5080567 MS.gene025691:CDS 50.0%
GGAAGAGCTTGATAGGGAGA+TGG + chr7.1:5080402-5080421 MS.gene025691:CDS 50.0%
GGCACATATCTTCCGACAAG+AGG - chr7.1:5080736-5080755 None:intergenic 50.0%
GGCATGAGTAGGTAGATCAG+GGG - chr7.1:5082497-5082516 None:intergenic 50.0%
GTGGAGTTGGGTAGGACTTT+AGG + chr7.1:5080526-5080545 MS.gene025691:CDS 50.0%
GTGGTATACGCATAGCTCTC+GGG - chr7.1:5080687-5080706 None:intergenic 50.0%
GTTCGATCTAGCAGTGGTTC+AGG + chr7.1:5083022-5083041 MS.gene025691:CDS 50.0%
TCACATGCACCTCAGATGTG+GGG + chr7.1:5081865-5081884 MS.gene025691:intron 50.0%
TCATCACCGATGGCATGAGT+AGG - chr7.1:5082508-5082527 None:intergenic 50.0%
TCTAGCAGTGGTTCAGGTCT+TGG + chr7.1:5083028-5083047 MS.gene025691:CDS 50.0%
TGTGCCACCTGAAGTTGTTG+CGG + chr7.1:5080750-5080769 MS.gene025691:CDS 50.0%
! CTTAGATTTAGCTCGGCGAG+AGG + chr7.1:5082052-5082071 MS.gene025691:CDS 50.0%
! CTTGCAGCTTGATGATCGGA+TGG - chr7.1:5083313-5083332 None:intergenic 50.0%
! GCTCTTCCGCCTTGTTCTTA+AGG - chr7.1:5080390-5080409 None:intergenic 50.0%
! GGCCAAGCATATAGTGGAAG+TGG + chr7.1:5083337-5083356 MS.gene025691:CDS 50.0%
! GTTTGGGGTCAGTCATGAGA+TGG - chr7.1:5082905-5082924 None:intergenic 50.0%
! TGAACTGACTCCAGAGCAGA+GGG + chr7.1:5082181-5082200 MS.gene025691:CDS 50.0%
! TGTTCTAGATCTGTCCCGAC+TGG + chr7.1:5082259-5082278 MS.gene025691:CDS 50.0%
!! GGGTAGGACTTTAGGATTGG+AGG + chr7.1:5080534-5080553 MS.gene025691:CDS 50.0%
!!! AAGCCGCTTTTCATCACCGA+TGG - chr7.1:5082518-5082537 None:intergenic 50.0%
!!! CCTTCATGGTGTTTTGGGAG+AGG + chr7.1:5082319-5082338 MS.gene025691:CDS 50.0%
ACCCGAACCGCAACAACTTC+AGG - chr7.1:5080760-5080779 None:intergenic 55.0%
AGGAGGTCGCCAATCCTGTA+AGG - chr7.1:5082632-5082651 None:intergenic 55.0%
CATGGGTGGGCACATATGGA+TGG + chr7.1:5083216-5083235 MS.gene025691:CDS 55.0%
CCACTCTTGTGGAGTTGGGT+AGG + chr7.1:5080518-5080537 MS.gene025691:CDS 55.0%
CCTACCCAACTCCACAAGAG+TGG - chr7.1:5080521-5080540 None:intergenic 55.0%
CCTCACATGCACCTCAGATG+TGG + chr7.1:5081863-5081882 MS.gene025691:intron 55.0%
CGAACCGCAACAACTTCAGG+TGG - chr7.1:5080757-5080776 None:intergenic 55.0%
GAGAGCGAGGGTCACGATAA+AGG + chr7.1:5083238-5083257 MS.gene025691:CDS 55.0%
GATCTGTCCCGACTGGAAGA+TGG + chr7.1:5082266-5082285 MS.gene025691:CDS 55.0%
GCACATATGGATGGAGAGCG+AGG + chr7.1:5083225-5083244 MS.gene025691:CDS 55.0%
GGACCTGTTCGATCTAGCAG+TGG + chr7.1:5083016-5083035 MS.gene025691:CDS 55.0%
GGCCGCTGAATCCCAATAAG+TGG + chr7.1:5081267-5081286 MS.gene025691:intron 55.0%
GTGGCTAAAAAAGGGAGGGC+AGG + chr7.1:5081286-5081305 MS.gene025691:intron 55.0%
TGCATGTGGAGTATGCGCTG+AGG + chr7.1:5081246-5081265 MS.gene025691:intron 55.0%
! AGGAGGCATGTGCAGGCAAA+GGG - chr7.1:5081676-5081695 None:intergenic 55.0%
! CCACATCTGAGGTGCATGTG+AGG - chr7.1:5081866-5081885 None:intergenic 55.0%
! CTGAACTGACTCCAGAGCAG+AGG + chr7.1:5082180-5082199 MS.gene025691:CDS 55.0%
! TAGGAGGCATGTGCAGGCAA+AGG - chr7.1:5081677-5081696 None:intergenic 55.0%
! TCGGATTAGGAGGCATGTGC+AGG - chr7.1:5081683-5081702 None:intergenic 55.0%
AGCTCGGCGAGAGGCTGAAA+TGG + chr7.1:5082061-5082080 MS.gene025691:CDS 60.0%
GCGAGCCCGGGATCAACTCA+TGG + chr7.1:5082016-5082035 MS.gene025691:CDS 65.0%
TGGAGGAGTCCATGCGAGCC+CGG + chr7.1:5082003-5082022 MS.gene025691:CDS 65.0%
! GAGTTGATCCCGGGCTCGCA+TGG - chr7.1:5082015-5082034 None:intergenic 65.0%
GGAGGAGTCCATGCGAGCCC+GGG + chr7.1:5082004-5082023 MS.gene025691:CDS 70.0%


Chromosome Type Strat End Strand Name
chr7.1 gene 5080022 5083438 5080022 ID=MS.gene025691
chr7.1 mRNA 5080022 5083438 5080022 ID=MS.gene025691.t1;Parent=MS.gene025691
chr7.1 exon 5080022 5080915 5080022 ID=MS.gene025691.t1.exon1;Parent=MS.gene025691.t1
chr7.1 CDS 5080022 5080915 5080022 ID=cds.MS.gene025691.t1;Parent=MS.gene025691.t1
chr7.1 exon 5081972 5082340 5081972 ID=MS.gene025691.t1.exon2;Parent=MS.gene025691.t1
chr7.1 CDS 5081972 5082340 5081972 ID=cds.MS.gene025691.t1;Parent=MS.gene025691.t1
chr7.1 exon 5082433 5082699 5082433 ID=MS.gene025691.t1.exon3;Parent=MS.gene025691.t1
chr7.1 CDS 5082433 5082699 5082433 ID=cds.MS.gene025691.t1;Parent=MS.gene025691.t1
chr7.1 exon 5082941 5083068 5082941 ID=MS.gene025691.t1.exon4;Parent=MS.gene025691.t1
chr7.1 CDS 5082941 5083068 5082941 ID=cds.MS.gene025691.t1;Parent=MS.gene025691.t1
chr7.1 exon 5083204 5083438 5083204 ID=MS.gene025691.t1.exon5;Parent=MS.gene025691.t1
chr7.1 CDS 5083204 5083438 5083204 ID=cds.MS.gene025691.t1;Parent=MS.gene025691.t1
Gene Sequence

>MS.gene025691

ATGATGGAGTCTTGCGAGTGTATCGACACGCCTTATCCTCCAGATGAACTTCTTGTCAAGTATCAATACATCTCTGACGTTCTAATCGCACTTGCGTATTTCTCAATTCCTGTCGAACTCATTTATTTTGTTCAGAAATCTGCTTTCTTTCCATATAGATGGGTTCTTATGCAGTTTGGGGCTTTTATTGTTCTATGTGGAGCAACTCATTTTATAAATCTGTGGACATTCTCAGCTCACACGAAAGCTGTTGCTGTTGTAATGACCATCGCTAAAGTGTCGTGTGCTATTGTCTCATGTGCCACTGCACTTATGCTTGTTCATATTATTCCCGATCTGTTGAGTGTTAAAACCCGTGAGTTGTTCCTTAAGAACAAGGCGGAAGAGCTTGATAGGGAGATGGGACTTATTCTTACTCAGGAAGAAACCGGAAGACATGTGAGAATGTTGACTCATGAAATTAGGAGCACTCTTGATAGGCATACTATTCTAAAGACCACTCTTGTGGAGTTGGGTAGGACTTTAGGATTGGAGGAATGTGCACTGTGGATGCCATCAAGAAGTGGTTTGAATCTACAACTTTCTCATACTTTAACTTATCATGTACAAGTTGGTTCTACTGTGCCAACAAACCTTCCTATTGTCAATGAAGTCTTCAGTAACCCGAGAGCTATGCGTATACCACACACTTGTCCACTTGCTAGGATAAGACCTCTTGTCGGAAGATATGTGCCACCTGAAGTTGTTGCGGTTCGGGTGCCGCTTCTACATTTGTCAAATTTCCAAATTAATGATTGGCCTGAGCTTTCGGCAAAAAGTTATGCAATTATGGTTCTTATTCTCCCTACTGATAGTGCTAGAAAGTGGCGAGACCATGAGTTGGAGCTTGTCGATGTTGTTGCAGATCAGGTTTGTTTGATTTCTTTTATTTTATTGGTTCTTTTTTTTTTCCCTGAATATTTTTTATTCCGTATTTCCGTTGTTTTCTATTCCTTTTCTTTTGATTGCTTAAACACTCATATTTATTGTCATTGTGCCTGTAAGTTCTGTTCTGAGTCTGACTATTGCTGTGAACTTGTTTTGGAGTTTGGAGCATAGAATAGTTGAAAATTAGGAAATGGCTATCAATCATTGGCCATTTGGGCTTTATAGTTATTTCTCAACCATCAAGGTAGAAGACAGAATATGACACCTAGTGACTTAAGTAAAGAACCATATTAGGTATGCATGTGGAGTATGCGCTGAGGCCGCTGAATCCCAATAAGTGGCTAAAAAAGGGAGGGCAGGTCATGTAATTATGAAGCCTGTGATATTTGTATTTAATACTTTTTGTCTGCATAATTCAACCTCTGCGATATAGTTTACACATGGATTCCATCTTATGTCGTTTTCTTTTCACTTAATGCTGTATCCGAGCCAGTCTAATTTTGATTTTGGCCATTGAAGATATATGGTGGCTCAATATCAAGACTGAGATAGGCTCGGGTACTGTACTAAATTTAAGAACGAGATTGGAAAAATGGGGTAAACAAACACGTGACAATGTCTAGTTACTTCTCTTAACATCAAATATTGAAATAATCTGATGCAGATCTGTCTAGGATAAATTTACAACAAATGTGTGTGGGACCTGACTTTTAAGTGTTTTATTCCCTTTGCCTGCACATGCCTCCTAATCCGAAAAGACCAAATTAAATACCTGAAACTTTTCATTCAATTGTATGGCTTTTAGGAATATCATTTTCTTTCTAGATTAAATTACCATATTAACTGTGTTTGAAATTACAGTTGCCGTTTCAAAATGTCGCCAACATTTTCTAGTGCTGATATGGCATTTGTTTCCTCACATGCACCTCAGATGTGGGGACATGATTGTGTTATTATTCATTTCAAAAATTTTACTTGAGATTCTATTCCTCCGTATGCTGAATCCATTTAGTTTCCATACAGGTAGCAGTTGCCCTTTCACATGCTGCTATTTTGGAGGAGTCCATGCGAGCCCGGGATCAACTCATGGAACAAAACGTTGCCTTAGATTTAGCTCGGCGAGAGGCTGAAATGGCAATTCATGCTCGCAATGATTTCCTTGCAGTCATGAATCATGAAATGAGAACACCGATGCATGCAATTATAGCATTGTCATCACTTCTTTTGGAGACTGAACTGACTCCAGAGCAGAGGGTTATGATAGAGACTGTATTGAAGAGTAGTAATGTTTTGGCAGCACTTATCAATGATGTTCTAGATCTGTCCCGACTGGAAGATGGTAGCCTTGAATTAGAAATGGCAAAAATCAACCTTCATGGTGTTTTGGGAGAGGTAATTTCAAGAAATCTGAGATATCTGTAACATTATTTGTTAACATCTACCATGAACAGCATTTATGTATTGCTTTTCTATTGTTAATGCAGGTCATTGAACTGATTAAGCCTATAGCATCTGTGAAAAAACTACCCATTACTTTAATTCTTGCCCCTGATCTACCTACTCATGCCATCGGTGATGAAAAGCGGCTTATGCAGACACTTTTGAATGTTGTGGGCAATGCTGTCAAATATACTAAGGAGGGCTATGTTTCTATAAGAGCTTCTGTTGCAAAACCAGAATCCTTACAGGATTGGCGACCTCCTGAGTTTTATCCAGCATCAAGTGATGGTCATTTCTATATACGAGTCCAGGTTATGACTTTGGCATCTCAATATCTGAACTCTCTATCCATATGTTAATGTGATTGAATTCTTGGGTTATCTAAATAATTAAGTCATCTAGATCATCCATACCTACATTTCTAGGAAAGAGCCCAAAGATATCTCTACCTTTTCATTATGTTATCGACTTATCATTGTAGCAACTGTTAGAAATTAATCTAGGTATTGATTTCCATCTCATGACTGACCCCAAACATCCTTCTTTGTGCAGGTTAAGGATTCTGGATGTGGCATTCTACCACAAGATATTCCACATCTCTTTACCAAGTTTACTCAGTCTCAGAGTGGACCTGTTCGATCTAGCAGTGGTTCAGGTCTTGGACTAGCTATTTGTAAAAGGTAGGGAAAACATAATTTTGATGTTGATGCCTAGCAAGTCACCATTATTACCCTTATGTGAAATGCATATTAACACTGCTGCTTAAATAGAGTAGTTTTTGTTTATTGAGTTATTGACTGTCAAAATTGATTCAGATTTGTAAATCTCATGGGTGGGCACATATGGATGGAGAGCGAGGGTCACGATAAAGGAAGCACAGCTACATTTGTAGTCAAACTTGGGATTTGTGGCAATGCAGATCCATCCGATCATCAAGCTGCAAGCAGAGGCCAAGCATATAGTGGAAGTGGAGGCCTTGCTAGATTTAAGCACTTACTCAATGATGACGACATAGGTTTTTCTAATAGACGCAATCAAAGAAGTTTCTGA
Protein sequence

>MS.gene025691.t1

MMESCECIDTPYPPDELLVKYQYISDVLIALAYFSIPVELIYFVQKSAFFPYRWVLMQFGAFIVLCGATHFINLWTFSAHTKAVAVVMTIAKVSCAIVSCATALMLVHIIPDLLSVKTRELFLKNKAEELDREMGLILTQEETGRHVRMLTHEIRSTLDRHTILKTTLVELGRTLGLEECALWMPSRSGLNLQLSHTLTYHVQVGSTVPTNLPIVNEVFSNPRAMRIPHTCPLARIRPLVGRYVPPEVVAVRVPLLHLSNFQINDWPELSAKSYAIMVLILPTDSARKWRDHELELVDVAVALSHAAILEESMRARDQLMEQNVALDLARREAEMAIHARNDFLAVMNHEMRTPMHAIIALSSLLLETELTPEQRVMIETVLKSSNVLAALINDVLDLSRLEDGSLELEMAKINLHGVLGEVIELIKPIASVKKLPITLILAPDLPTHAIGDEKRLMQTLLNVVGNAVKYTKEGYVSIRASVAKPESLQDWRPPEFYPASSDGHFYIRVQVKDSGCGILPQDIPHLFTKFTQSQSGPVRSSSGSGLGLAICKRFVNLMGGHIWMESEGHDKGSTATFVVKLGICGNADPSDHQAASRGQAYSGSGGLARFKHLLNDDDIGFSNRRNQRSF