Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025855.t1 | XP_003626611.1 | 97.3 | 186 | 5 | 0 | 39 | 224 | 44 | 229 | 5.00E-97 | 364 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025855.t1 | Q9SJ54 | 32.1 | 156 | 106 | 0 | 55 | 210 | 35 | 190 | 7.7e-22 | 105.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025855.t1 | Q2HTB8 | 97.3 | 186 | 5 | 0 | 39 | 224 | 44 | 229 | 3.6e-97 | 364.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene025855 | MS.gene025640 | PPI |
| MS.gene050363 | MS.gene025855 | PPI |
| MS.gene025855 | MS.gene007146 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025855.t1 | MTR_7g118270 | 93.450 | 229 | 10 | 1 | 1 | 224 | 1 | 229 | 1.10e-150 | 418 |
| MS.gene025855.t1 | MTR_8g024250 | 60.847 | 189 | 74 | 0 | 35 | 223 | 92 | 280 | 8.21e-74 | 225 |
| MS.gene025855.t1 | MTR_7g106050 | 37.888 | 161 | 98 | 2 | 45 | 204 | 24 | 183 | 5.10e-35 | 124 |
| MS.gene025855.t1 | MTR_3g092790 | 36.538 | 156 | 93 | 2 | 64 | 219 | 49 | 198 | 6.91e-29 | 108 |
| MS.gene025855.t1 | MTR_1g057420 | 33.103 | 145 | 97 | 0 | 60 | 204 | 39 | 183 | 1.46e-24 | 96.7 |
| MS.gene025855.t1 | MTR_2g086790 | 32.584 | 178 | 106 | 4 | 39 | 204 | 18 | 193 | 1.51e-24 | 97.1 |
| MS.gene025855.t1 | MTR_2g011350 | 29.570 | 186 | 127 | 3 | 24 | 207 | 7 | 190 | 5.82e-22 | 89.7 |
| MS.gene025855.t1 | MTR_4g051880 | 33.566 | 143 | 87 | 1 | 64 | 198 | 44 | 186 | 5.85e-20 | 84.7 |
| MS.gene025855.t1 | MTR_2g087080 | 30.814 | 172 | 111 | 5 | 20 | 185 | 5 | 174 | 2.77e-16 | 75.1 |
| MS.gene025855.t1 | MTR_4g119428 | 30.573 | 157 | 105 | 3 | 51 | 205 | 65 | 219 | 1.60e-15 | 73.6 |
| MS.gene025855.t1 | MTR_1g057270 | 30.464 | 151 | 101 | 3 | 57 | 205 | 73 | 221 | 3.26e-15 | 72.8 |
| MS.gene025855.t1 | MTR_2g100060 | 27.108 | 166 | 112 | 3 | 53 | 217 | 77 | 234 | 3.48e-12 | 64.3 |
| MS.gene025855.t1 | MTR_2g087000 | 25.641 | 156 | 114 | 2 | 33 | 188 | 42 | 195 | 8.90e-12 | 62.8 |
| MS.gene025855.t1 | MTR_5g087760 | 23.353 | 167 | 123 | 4 | 41 | 203 | 70 | 235 | 1.25e-11 | 62.8 |
| MS.gene025855.t1 | MTR_1g105570 | 23.958 | 192 | 136 | 3 | 12 | 200 | 25 | 209 | 8.65e-11 | 60.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025855.t1 | AT4G01410 | 53.226 | 186 | 87 | 0 | 39 | 224 | 42 | 227 | 2.88e-66 | 204 |
| MS.gene025855.t1 | AT3G52470 | 32.370 | 173 | 115 | 2 | 39 | 210 | 17 | 188 | 2.19e-32 | 117 |
| MS.gene025855.t1 | AT2G35960 | 32.051 | 156 | 106 | 0 | 55 | 210 | 35 | 190 | 1.51e-29 | 109 |
| MS.gene025855.t1 | AT3G44220 | 33.149 | 181 | 116 | 3 | 48 | 224 | 27 | 206 | 1.34e-28 | 107 |
| MS.gene025855.t1 | AT4G09590 | 30.488 | 164 | 112 | 2 | 48 | 210 | 29 | 191 | 3.42e-28 | 106 |
| MS.gene025855.t1 | AT3G11660 | 34.132 | 167 | 106 | 3 | 49 | 212 | 26 | 191 | 3.95e-28 | 106 |
| MS.gene025855.t1 | AT2G35970 | 31.098 | 164 | 111 | 2 | 48 | 210 | 29 | 191 | 1.74e-27 | 104 |
| MS.gene025855.t1 | AT5G53730 | 33.962 | 159 | 98 | 4 | 49 | 204 | 38 | 192 | 6.12e-27 | 103 |
| MS.gene025855.t1 | AT5G22200 | 33.136 | 169 | 108 | 3 | 60 | 224 | 43 | 210 | 1.93e-26 | 101 |
| MS.gene025855.t1 | AT5G06330 | 34.395 | 157 | 97 | 4 | 60 | 212 | 39 | 193 | 6.64e-26 | 100 |
| MS.gene025855.t1 | AT5G22870 | 30.120 | 166 | 112 | 3 | 44 | 206 | 30 | 194 | 3.39e-19 | 82.8 |
| MS.gene025855.t1 | AT4G05220 | 25.248 | 202 | 145 | 4 | 8 | 209 | 17 | 212 | 9.95e-19 | 81.6 |
| MS.gene025855.t1 | AT2G35980 | 28.221 | 163 | 114 | 3 | 41 | 201 | 41 | 202 | 3.83e-16 | 74.7 |
| MS.gene025855.t1 | AT1G61760 | 23.232 | 198 | 148 | 3 | 5 | 202 | 11 | 204 | 8.40e-14 | 68.6 |
| MS.gene025855.t1 | AT2G27080 | 22.549 | 204 | 149 | 3 | 3 | 203 | 43 | 240 | 9.80e-14 | 68.9 |
| MS.gene025855.t1 | AT2G27080 | 22.549 | 204 | 149 | 3 | 3 | 203 | 43 | 240 | 9.80e-14 | 68.9 |
| MS.gene025855.t1 | AT3G11650 | 29.375 | 160 | 113 | 0 | 42 | 201 | 56 | 215 | 2.70e-13 | 67.4 |
| MS.gene025855.t1 | AT5G06320 | 26.667 | 165 | 119 | 2 | 41 | 204 | 49 | 212 | 6.19e-12 | 63.5 |
| MS.gene025855.t1 | AT3G52460 | 30.159 | 126 | 87 | 1 | 24 | 149 | 92 | 216 | 4.55e-11 | 61.6 |
Find 76 sgRNAs with CRISPR-Local
Find 84 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGAGATGGTGTTGTTGGTT+TGG | 0.257389 | 7.1:+347752 | None:intergenic |
| ACAATAAGAAGTGCACATTA+TGG | 0.331744 | 7.1:-347230 | MS.gene025855:CDS |
| GGTTTGAAACTTGTGTTTCT+TGG | 0.338420 | 7.1:-347275 | MS.gene025855:CDS |
| TTGTTCATTTGTAGTTTGTC+AGG | 0.341103 | 7.1:+347728 | None:intergenic |
| AGATGGTGTTGTTGGTTTGG+AGG | 0.350365 | 7.1:+347755 | None:intergenic |
| AGTGCACATTATGGGTTCTA+TGG | 0.355998 | 7.1:-347221 | MS.gene025855:CDS |
| GTTGTCGGTGCTGCCATCTA+TGG | 0.361215 | 7.1:-347572 | MS.gene025855:CDS |
| TAAACAGAGACACGCTTGTT+TGG | 0.364464 | 7.1:+347485 | None:intergenic |
| CAACATAACCTGCGGTGTTA+TGG | 0.381942 | 7.1:+347421 | None:intergenic |
| AAACAGAGACACGCTTGTTT+GGG | 0.403133 | 7.1:+347486 | None:intergenic |
| GAAGAAAGGTGTTGTTGGAC+AGG | 0.422913 | 7.1:-347174 | MS.gene025855:CDS |
| GTTGGACAGGTTCCTCTGCT+TGG | 0.423856 | 7.1:-347161 | MS.gene025855:CDS |
| GTGTCACTCTACTTGTTCTC+TGG | 0.424057 | 7.1:-347628 | MS.gene025855:CDS |
| TTGATGCTGGATGAGGCTTA+TGG | 0.430904 | 7.1:-347305 | MS.gene025855:CDS |
| GAAGAAGAAGGTGGAGCAGC+AGG | 0.436261 | 7.1:+347704 | None:intergenic |
| GAGGTTGAGACCGAGAGCTT+TGG | 0.436924 | 7.1:+347774 | None:intergenic |
| GTTTCGTTGTCACCCGTGAT+AGG | 0.438013 | 7.1:-347368 | MS.gene025855:CDS |
| CACCGCCGTGCCTCCTATCA+CGG | 0.449253 | 7.1:+347355 | None:intergenic |
| TGTTCATTTGTAGTTTGTCA+GGG | 0.450921 | 7.1:+347729 | None:intergenic |
| AGTTTGAAGAAAGGTGTTGT+TGG | 0.459945 | 7.1:-347179 | MS.gene025855:CDS |
| CAATAAGAAGTGCACATTAT+GGG | 0.461680 | 7.1:-347229 | MS.gene025855:CDS |
| GATAGGAGGCACGGCGGTGC+CGG | 0.463367 | 7.1:-347351 | MS.gene025855:CDS |
| ACCATCTTTCTCCTACTAAT+CGG | 0.470963 | 7.1:-347650 | MS.gene025855:CDS |
| TGTTATGGCTTGGTTCCTAT+AGG | 0.472587 | 7.1:+347436 | None:intergenic |
| TCCACACAAACCCCACTTCA+CGG | 0.478409 | 7.1:-347594 | MS.gene025855:CDS |
| GGAAGGTTGAGGTGGAAAGC+AGG | 0.479345 | 7.1:-347254 | MS.gene025855:CDS |
| GTAGAGTGACACCGATTAGT+AGG | 0.480110 | 7.1:+347639 | None:intergenic |
| GCTTGTTTGGGTTCTTAATG+AGG | 0.483668 | 7.1:+347498 | None:intergenic |
| TGAAACTTGTGTTTCTTGGA+AGG | 0.491598 | 7.1:-347271 | MS.gene025855:CDS |
| GATGAGGCTTATGGAGTGGT+GGG | 0.497395 | 7.1:-347296 | MS.gene025855:CDS |
| GAATGTGGCAAAAGCACGTC+CGG | 0.497511 | 7.1:+347676 | None:intergenic |
| GTGTCTCTGTTTACTATGAC+AGG | 0.497541 | 7.1:-347475 | MS.gene025855:CDS |
| CACGGCGGTGCCGGTGTCAG+TGG | 0.506185 | 7.1:-347342 | MS.gene025855:CDS |
| GGATGAGGCTTATGGAGTGG+TGG | 0.506636 | 7.1:-347297 | MS.gene025855:CDS |
| TAACCTGCGGTGTTATGGCT+TGG | 0.514717 | 7.1:+347426 | None:intergenic |
| AAACCCCACTTCACGGTTGT+CGG | 0.517422 | 7.1:-347587 | MS.gene025855:CDS |
| TTCATTTGTAGTTTGTCAGG+GGG | 0.517944 | 7.1:+347731 | None:intergenic |
| TTGTGTTTCTTGGAAGGTTG+AGG | 0.518679 | 7.1:-347265 | MS.gene025855:CDS |
| GGCGGAAAGGAGAGGTGGTG+AGG | 0.529043 | 7.1:+347538 | None:intergenic |
| GACGTTGAACTGCAAGGTGG+CGG | 0.539926 | 7.1:+347520 | None:intergenic |
| ACCGCCGTGCCTCCTATCAC+GGG | 0.546771 | 7.1:+347356 | None:intergenic |
| AGCACCGACAACCGTGAAGT+GGG | 0.547830 | 7.1:+347583 | None:intergenic |
| AGTATCGAATGGGTTGATGC+TGG | 0.561668 | 7.1:-347318 | MS.gene025855:CDS |
| GGTTGTGTTGAAGCCATAGA+TGG | 0.563401 | 7.1:+347559 | None:intergenic |
| GAGAAAGATGGTGAGGAATG+TGG | 0.564646 | 7.1:+347661 | None:intergenic |
| TTTCATATGTCTATGTAGCA+AGG | 0.568280 | 7.1:+347131 | None:intergenic |
| CAGCACCGACAACCGTGAAG+TGG | 0.571917 | 7.1:+347582 | None:intergenic |
| GTGTCAGTGGAAGTATCGAA+TGG | 0.575731 | 7.1:-347329 | MS.gene025855:CDS |
| GAAGGTTGAGGTGGAAAGCA+GGG | 0.580693 | 7.1:-347253 | MS.gene025855:CDS |
| GTTCATTTGTAGTTTGTCAG+GGG | 0.581299 | 7.1:+347730 | None:intergenic |
| ACCGATTAGTAGGAGAAAGA+TGG | 0.581384 | 7.1:+347649 | None:intergenic |
| GAATGGGTTGATGCTGGATG+AGG | 0.584550 | 7.1:-347312 | MS.gene025855:CDS |
| GTATTGATCAGTTTGAAGAA+AGG | 0.586844 | 7.1:-347188 | MS.gene025855:CDS |
| TGAAGTGGGGTTTGTGTGGA+CGG | 0.587867 | 7.1:+347597 | None:intergenic |
| TTCGATACTTCCACTGACAC+CGG | 0.587929 | 7.1:+347332 | None:intergenic |
| TGGTAGAAAACCAAAGCTCT+CGG | 0.590509 | 7.1:-347784 | MS.gene025855:CDS |
| TCGTTGTCACCCGTGATAGG+AGG | 0.593989 | 7.1:-347365 | MS.gene025855:CDS |
| TGTCAGTGGAAGTATCGAAT+GGG | 0.594065 | 7.1:-347328 | MS.gene025855:CDS |
| ACCGTGAAGTGGGGTTTGTG+TGG | 0.595899 | 7.1:+347593 | None:intergenic |
| CGTCCGGAAGAAGAAGAAGA+AGG | 0.596935 | 7.1:+347692 | None:intergenic |
| TGAACTGCAAGGTGGCGGAA+AGG | 0.610601 | 7.1:+347525 | None:intergenic |
| TGTTTCTTGGAAGGTTGAGG+TGG | 0.612129 | 7.1:-347262 | MS.gene025855:CDS |
| TGCAAGGTGGCGGAAAGGAG+AGG | 0.612911 | 7.1:+347530 | None:intergenic |
| AATGAGGACGTTGAACTGCA+AGG | 0.627017 | 7.1:+347514 | None:intergenic |
| TCATTTGTAGTTTGTCAGGG+GGG | 0.633124 | 7.1:+347732 | None:intergenic |
| GTCACCCGTGATAGGAGGCA+CGG | 0.633334 | 7.1:-347360 | MS.gene025855:CDS |
| GAACCAAGCCATAACACCGC+AGG | 0.637199 | 7.1:-347429 | MS.gene025855:CDS |
| CAAGGTGGAGTACCAAGCAG+AGG | 0.643384 | 7.1:+347149 | None:intergenic |
| GCACCGACAACCGTGAAGTG+GGG | 0.662185 | 7.1:+347584 | None:intergenic |
| TTAGTAGGAGAAAGATGGTG+AGG | 0.663920 | 7.1:+347654 | None:intergenic |
| AAGGTGGCGGAAAGGAGAGG+TGG | 0.684020 | 7.1:+347533 | None:intergenic |
| AGCGGTGGCAACATAACCTG+CGG | 0.687182 | 7.1:+347413 | None:intergenic |
| GCTGGATGAGGCTTATGGAG+TGG | 0.698271 | 7.1:-347300 | MS.gene025855:CDS |
| CATATGTCTATGTAGCAAGG+TGG | 0.704549 | 7.1:+347134 | None:intergenic |
| ACCCGTGATAGGAGGCACGG+CGG | 0.754758 | 7.1:-347357 | MS.gene025855:CDS |
| GAGGACGTTGAACTGCAAGG+TGG | 0.772968 | 7.1:+347517 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| ! | ACAATAAGAAGTGCACATTA+TGG | - | chr7.1:347688-347707 | MS.gene025855:CDS | 30.0% |
| ! | CAATAAGAAGTGCACATTAT+GGG | - | chr7.1:347689-347708 | MS.gene025855:CDS | 30.0% |
| ! | GTATTGATCAGTTTGAAGAA+AGG | - | chr7.1:347730-347749 | MS.gene025855:CDS | 30.0% |
| ! | TGTTCATTTGTAGTTTGTCA+GGG | + | chr7.1:347192-347211 | None:intergenic | 30.0% |
| ! | TTGTTCATTTGTAGTTTGTC+AGG | + | chr7.1:347193-347212 | None:intergenic | 30.0% |
| ACCATCTTTCTCCTACTAAT+CGG | - | chr7.1:347268-347287 | MS.gene025855:CDS | 35.0% | |
| TGAAACTTGTGTTTCTTGGA+AGG | - | chr7.1:347647-347666 | MS.gene025855:CDS | 35.0% | |
| ! | GGTTTGAAACTTGTGTTTCT+TGG | - | chr7.1:347643-347662 | MS.gene025855:CDS | 35.0% |
| ! | GTTCATTTGTAGTTTGTCAG+GGG | + | chr7.1:347191-347210 | None:intergenic | 35.0% |
| ! | TTCATTTGTAGTTTGTCAGG+GGG | + | chr7.1:347190-347209 | None:intergenic | 35.0% |
| !! | AGTTTGAAGAAAGGTGTTGT+TGG | - | chr7.1:347739-347758 | MS.gene025855:CDS | 35.0% |
| AAACAGAGACACGCTTGTTT+GGG | + | chr7.1:347435-347454 | None:intergenic | 40.0% | |
| ACCGATTAGTAGGAGAAAGA+TGG | + | chr7.1:347272-347291 | None:intergenic | 40.0% | |
| AGTGCACATTATGGGTTCTA+TGG | - | chr7.1:347697-347716 | MS.gene025855:CDS | 40.0% | |
| CATATGTCTATGTAGCAAGG+TGG | + | chr7.1:347787-347806 | None:intergenic | 40.0% | |
| CTATGCTTCTCCAGAAAAAG+CGG | + | chr7.1:347526-347545 | None:intergenic | 40.0% | |
| GTGTCTCTGTTTACTATGAC+AGG | - | chr7.1:347443-347462 | MS.gene025855:CDS | 40.0% | |
| TAAACAGAGACACGCTTGTT+TGG | + | chr7.1:347436-347455 | None:intergenic | 40.0% | |
| TGGTAGAAAACCAAAGCTCT+CGG | - | chr7.1:347134-347153 | MS.gene025855:CDS | 40.0% | |
| TTAGTAGGAGAAAGATGGTG+AGG | + | chr7.1:347267-347286 | None:intergenic | 40.0% | |
| TTGTGTTTCTTGGAAGGTTG+AGG | - | chr7.1:347653-347672 | MS.gene025855:CDS | 40.0% | |
| ! | GCTTGTTTGGGTTCTTAATG+AGG | + | chr7.1:347423-347442 | None:intergenic | 40.0% |
| ! | TCATTTGTAGTTTGTCAGGG+GGG | + | chr7.1:347189-347208 | None:intergenic | 40.0% |
| !! | TCTCTGCTTTTGTGTCCTAT+AGG | - | chr7.1:347467-347486 | MS.gene025855:CDS | 40.0% |
| !! | TGTCAGTGGAAGTATCGAAT+GGG | - | chr7.1:347590-347609 | MS.gene025855:CDS | 40.0% |
| !! | TGTTATGGCTTGGTTCCTAT+AGG | + | chr7.1:347485-347504 | None:intergenic | 40.0% |
| !! | TTTTCTGGAGAAGCATAGTC+AGG | - | chr7.1:347528-347547 | MS.gene025855:CDS | 40.0% |
| AATGAGGACGTTGAACTGCA+AGG | + | chr7.1:347407-347426 | None:intergenic | 45.0% | |
| CCACCTTCTTCTTCTTCTTC+CGG | - | chr7.1:347223-347242 | MS.gene025855:CDS | 45.0% | |
| GAGAAAGATGGTGAGGAATG+TGG | + | chr7.1:347260-347279 | None:intergenic | 45.0% | |
| GGTTGTGTTGAAGCCATAGA+TGG | + | chr7.1:347362-347381 | None:intergenic | 45.0% | |
| TGTTTCTTGGAAGGTTGAGG+TGG | - | chr7.1:347656-347675 | MS.gene025855:CDS | 45.0% | |
| TTCGATACTTCCACTGACAC+CGG | + | chr7.1:347589-347608 | None:intergenic | 45.0% | |
| TTGATGCTGGATGAGGCTTA+TGG | - | chr7.1:347613-347632 | MS.gene025855:CDS | 45.0% | |
| ! | CAACATAACCTGCGGTGTTA+TGG | + | chr7.1:347500-347519 | None:intergenic | 45.0% |
| ! | GTAGAGTGACACCGATTAGT+AGG | + | chr7.1:347282-347301 | None:intergenic | 45.0% |
| ! | GTGTCACTCTACTTGTTCTC+TGG | - | chr7.1:347290-347309 | MS.gene025855:CDS | 45.0% |
| !! | AGATGGTGTTGTTGGTTTGG+AGG | + | chr7.1:347166-347185 | None:intergenic | 45.0% |
| !! | AGTATCGAATGGGTTGATGC+TGG | - | chr7.1:347600-347619 | MS.gene025855:CDS | 45.0% |
| !! | GAAGAAAGGTGTTGTTGGAC+AGG | - | chr7.1:347744-347763 | MS.gene025855:CDS | 45.0% |
| !! | GTGTCAGTGGAAGTATCGAA+TGG | - | chr7.1:347589-347608 | MS.gene025855:CDS | 45.0% |
| !!! | TATGTTGCCACCGCTTTTTC+TGG | - | chr7.1:347513-347532 | MS.gene025855:CDS | 45.0% |
| AAACCCCACTTCACGGTTGT+CGG | - | chr7.1:347331-347350 | MS.gene025855:CDS | 50.0% | |
| CCGGAAGAAGAAGAAGAAGG+TGG | + | chr7.1:347226-347245 | None:intergenic | 50.0% | |
| CGTCCGGAAGAAGAAGAAGA+AGG | + | chr7.1:347229-347248 | None:intergenic | 50.0% | |
| GAAGGTTGAGGTGGAAAGCA+GGG | - | chr7.1:347665-347684 | MS.gene025855:CDS | 50.0% | |
| GATGAGGCTTATGGAGTGGT+GGG | - | chr7.1:347622-347641 | MS.gene025855:CDS | 50.0% | |
| GTTTCGTTGTCACCCGTGAT+AGG | - | chr7.1:347550-347569 | MS.gene025855:CDS | 50.0% | |
| TCCACACAAACCCCACTTCA+CGG | - | chr7.1:347324-347343 | MS.gene025855:CDS | 50.0% | |
| TGAAGTGGGGTTTGTGTGGA+CGG | + | chr7.1:347324-347343 | None:intergenic | 50.0% | |
| TGCTTCTCCAGAAAAAGCGG+TGG | + | chr7.1:347523-347542 | None:intergenic | 50.0% | |
| ! | GAATGTGGCAAAAGCACGTC+CGG | + | chr7.1:347245-347264 | None:intergenic | 50.0% |
| !! | GAATGGGTTGATGCTGGATG+AGG | - | chr7.1:347606-347625 | MS.gene025855:CDS | 50.0% |
| !! | GGGAGATGGTGTTGTTGGTT+TGG | + | chr7.1:347169-347188 | None:intergenic | 50.0% |
| !! | TAACCTGCGGTGTTATGGCT+TGG | + | chr7.1:347495-347514 | None:intergenic | 50.0% |
| ACCGTGAAGTGGGGTTTGTG+TGG | + | chr7.1:347328-347347 | None:intergenic | 55.0% | |
| AGCGGTGGCAACATAACCTG+CGG | + | chr7.1:347508-347527 | None:intergenic | 55.0% | |
| GAACCAAGCCATAACACCGC+AGG | - | chr7.1:347489-347508 | MS.gene025855:CDS | 55.0% | |
| GAAGAAGAAGGTGGAGCAGC+AGG | + | chr7.1:347217-347236 | None:intergenic | 55.0% | |
| GACGTTGAACTGCAAGGTGG+CGG | + | chr7.1:347401-347420 | None:intergenic | 55.0% | |
| GAGGACGTTGAACTGCAAGG+TGG | + | chr7.1:347404-347423 | None:intergenic | 55.0% | |
| GAGGTTGAGACCGAGAGCTT+TGG | + | chr7.1:347147-347166 | None:intergenic | 55.0% | |
| GCTGGATGAGGCTTATGGAG+TGG | - | chr7.1:347618-347637 | MS.gene025855:CDS | 55.0% | |
| GGAAGGTTGAGGTGGAAAGC+AGG | - | chr7.1:347664-347683 | MS.gene025855:CDS | 55.0% | |
| GGATGAGGCTTATGGAGTGG+TGG | - | chr7.1:347621-347640 | MS.gene025855:CDS | 55.0% | |
| GTTGGACAGGTTCCTCTGCT+TGG | - | chr7.1:347757-347776 | MS.gene025855:CDS | 55.0% | |
| TCGTTGTCACCCGTGATAGG+AGG | - | chr7.1:347553-347572 | MS.gene025855:CDS | 55.0% | |
| ! | CAAGGTGGAGTACCAAGCAG+AGG | + | chr7.1:347772-347791 | None:intergenic | 55.0% |
| ! | GTAGTTTGTCAGGGGGGAGA+TGG | + | chr7.1:347183-347202 | None:intergenic | 55.0% |
| !! | AGCACCGACAACCGTGAAGT+GGG | + | chr7.1:347338-347357 | None:intergenic | 55.0% |
| !! | GTTGTCGGTGCTGCCATCTA+TGG | - | chr7.1:347346-347365 | MS.gene025855:CDS | 55.0% |
| !! | TGAACTGCAAGGTGGCGGAA+AGG | + | chr7.1:347396-347415 | None:intergenic | 55.0% |
| GTCACCCGTGATAGGAGGCA+CGG | - | chr7.1:347558-347577 | MS.gene025855:CDS | 60.0% | |
| ! | GCACCGACAACCGTGAAGTG+GGG | + | chr7.1:347337-347356 | None:intergenic | 60.0% |
| !! | AAGGTGGCGGAAAGGAGAGG+TGG | + | chr7.1:347388-347407 | None:intergenic | 60.0% |
| !! | CAGCACCGACAACCGTGAAG+TGG | + | chr7.1:347339-347358 | None:intergenic | 60.0% |
| !! | CAGGGGGGAGATGGTGTTGT+TGG | + | chr7.1:347174-347193 | None:intergenic | 60.0% |
| !! | TGCAAGGTGGCGGAAAGGAG+AGG | + | chr7.1:347391-347410 | None:intergenic | 60.0% |
| ACCGCCGTGCCTCCTATCAC+GGG | + | chr7.1:347565-347584 | None:intergenic | 65.0% | |
| CACCGCCGTGCCTCCTATCA+CGG | + | chr7.1:347566-347585 | None:intergenic | 65.0% | |
| GGCGGAAAGGAGAGGTGGTG+AGG | + | chr7.1:347383-347402 | None:intergenic | 65.0% | |
| ! | ACCCGTGATAGGAGGCACGG+CGG | - | chr7.1:347561-347580 | MS.gene025855:CDS | 65.0% |
| ! | GATAGGAGGCACGGCGGTGC+CGG | - | chr7.1:347567-347586 | MS.gene025855:CDS | 70.0% |
| !! | CACGGCGGTGCCGGTGTCAG+TGG | - | chr7.1:347576-347595 | MS.gene025855:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 347133 | 347807 | 347133 | ID=MS.gene025855 |
| chr7.1 | mRNA | 347133 | 347807 | 347133 | ID=MS.gene025855.t1;Parent=MS.gene025855 |
| chr7.1 | exon | 347133 | 347807 | 347133 | ID=MS.gene025855.t1.exon1;Parent=MS.gene025855.t1 |
| chr7.1 | CDS | 347133 | 347807 | 347133 | ID=cds.MS.gene025855.t1;Parent=MS.gene025855.t1 |
| Gene Sequence |
| Protein sequence |
