Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025928.t1 | XP_003626546.2 | 95.3 | 344 | 14 | 1 | 3 | 346 | 2 | 343 | 4.40E-185 | 657.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025928.t1 | Q944H5 | 57.8 | 365 | 119 | 6 | 10 | 345 | 55 | 413 | 4.0e-110 | 399.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025928.t1 | G7L414 | 95.3 | 344 | 14 | 1 | 3 | 346 | 2 | 343 | 3.2e-185 | 657.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene025928 | MS.gene07262 | PPI |
| MS.gene20783 | MS.gene025928 | PPI |
| MS.gene025928 | MS.gene20834 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025928.t1 | MTR_7g117030 | 95.376 | 346 | 13 | 2 | 1 | 346 | 1 | 343 | 0.0 | 677 |
| MS.gene025928.t1 | MTR_3g090820 | 64.420 | 371 | 103 | 6 | 4 | 345 | 24 | 394 | 4.17e-168 | 474 |
| MS.gene025928.t1 | MTR_3g090820 | 61.039 | 308 | 91 | 6 | 4 | 282 | 24 | 331 | 1.06e-126 | 367 |
| MS.gene025928.t1 | MTR_4g119770 | 26.647 | 334 | 198 | 12 | 22 | 334 | 14 | 321 | 3.05e-25 | 104 |
| MS.gene025928.t1 | MTR_2g436930 | 27.660 | 329 | 197 | 11 | 22 | 333 | 15 | 319 | 4.43e-24 | 101 |
| MS.gene025928.t1 | MTR_7g064980 | 28.626 | 262 | 164 | 6 | 88 | 343 | 75 | 319 | 2.71e-21 | 93.2 |
| MS.gene025928.t1 | MTR_4g119770 | 26.277 | 274 | 164 | 10 | 22 | 283 | 14 | 261 | 1.85e-19 | 87.0 |
| MS.gene025928.t1 | MTR_3g104600 | 28.413 | 271 | 164 | 12 | 81 | 335 | 70 | 326 | 2.08e-17 | 82.4 |
| MS.gene025928.t1 | MTR_4g018750 | 25.148 | 338 | 214 | 10 | 8 | 343 | 3 | 303 | 3.03e-17 | 81.6 |
| MS.gene025928.t1 | MTR_5g081150 | 27.237 | 257 | 165 | 6 | 88 | 338 | 81 | 321 | 3.26e-17 | 81.6 |
| MS.gene025928.t1 | MTR_7g066690 | 23.567 | 314 | 202 | 7 | 9 | 321 | 6 | 282 | 3.96e-17 | 81.3 |
| MS.gene025928.t1 | MTR_3g462140 | 25.484 | 310 | 194 | 8 | 13 | 321 | 8 | 281 | 8.77e-16 | 77.0 |
| MS.gene025928.t1 | MTR_6g091800 | 24.615 | 260 | 167 | 8 | 88 | 335 | 61 | 303 | 2.03e-15 | 76.3 |
| MS.gene025928.t1 | MTR_4g018750 | 25.952 | 289 | 181 | 8 | 8 | 295 | 3 | 259 | 2.10e-15 | 75.9 |
| MS.gene025928.t1 | MTR_3g107510 | 25.000 | 328 | 187 | 7 | 17 | 338 | 119 | 393 | 2.16e-15 | 77.0 |
| MS.gene025928.t1 | MTR_1g012030 | 27.099 | 262 | 159 | 8 | 84 | 338 | 174 | 410 | 2.88e-15 | 76.6 |
| MS.gene025928.t1 | MTR_2g436930 | 26.971 | 241 | 149 | 8 | 108 | 333 | 1 | 229 | 4.86e-15 | 73.9 |
| MS.gene025928.t1 | MTR_8g096050 | 25.098 | 255 | 171 | 7 | 88 | 339 | 266 | 503 | 1.94e-14 | 74.7 |
| MS.gene025928.t1 | MTR_3g104500 | 23.442 | 337 | 219 | 9 | 5 | 336 | 18 | 320 | 1.96e-14 | 73.6 |
| MS.gene025928.t1 | MTR_6g034145 | 24.231 | 260 | 168 | 8 | 88 | 335 | 7 | 249 | 2.79e-14 | 72.4 |
| MS.gene025928.t1 | MTR_7g084400 | 23.200 | 250 | 173 | 6 | 91 | 339 | 255 | 486 | 5.77e-14 | 73.2 |
| MS.gene025928.t1 | MTR_3g100570 | 23.642 | 313 | 211 | 7 | 17 | 322 | 3 | 294 | 6.81e-14 | 72.0 |
| MS.gene025928.t1 | MTR_6g034515 | 25.000 | 296 | 154 | 12 | 34 | 317 | 81 | 320 | 6.61e-13 | 69.3 |
| MS.gene025928.t1 | MTR_8g066975 | 24.921 | 317 | 190 | 10 | 32 | 339 | 20 | 297 | 7.30e-13 | 68.6 |
| MS.gene025928.t1 | MTR_5g032420 | 25.664 | 226 | 129 | 7 | 17 | 240 | 134 | 322 | 1.72e-12 | 67.8 |
| MS.gene025928.t1 | MTR_4g114320 | 25.000 | 332 | 182 | 12 | 17 | 338 | 120 | 394 | 2.89e-12 | 67.8 |
| MS.gene025928.t1 | MTR_6g091800 | 24.554 | 224 | 142 | 7 | 88 | 302 | 61 | 266 | 7.32e-12 | 65.5 |
| MS.gene025928.t1 | MTR_5g009500 | 24.513 | 359 | 211 | 11 | 1 | 338 | 19 | 338 | 8.17e-12 | 65.9 |
| MS.gene025928.t1 | MTR_5g030530 | 25.316 | 316 | 190 | 11 | 32 | 339 | 20 | 297 | 1.17e-11 | 65.1 |
| MS.gene025928.t1 | MTR_8g098240 | 23.313 | 326 | 183 | 7 | 18 | 335 | 318 | 584 | 1.37e-11 | 65.9 |
| MS.gene025928.t1 | MTR_5g081910 | 26.459 | 257 | 165 | 8 | 81 | 317 | 46 | 298 | 2.47e-11 | 64.3 |
| MS.gene025928.t1 | MTR_8g092080 | 25.466 | 322 | 178 | 12 | 35 | 344 | 40 | 311 | 2.48e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene025928.t1 | AT2G46320 | 63.966 | 358 | 103 | 6 | 5 | 342 | 10 | 361 | 3.04e-151 | 430 |
| MS.gene025928.t1 | AT4G27940 | 57.808 | 365 | 119 | 6 | 10 | 345 | 55 | 413 | 3.32e-144 | 414 |
| MS.gene025928.t1 | AT2G46320 | 70.472 | 254 | 67 | 3 | 92 | 342 | 14 | 262 | 3.43e-120 | 347 |
| MS.gene025928.t1 | AT2G46320 | 70.472 | 254 | 67 | 3 | 92 | 342 | 14 | 262 | 3.43e-120 | 347 |
| MS.gene025928.t1 | AT2G46320 | 70.472 | 254 | 67 | 3 | 92 | 342 | 14 | 262 | 3.43e-120 | 347 |
| MS.gene025928.t1 | AT2G46320 | 70.283 | 212 | 57 | 2 | 92 | 302 | 14 | 220 | 2.62e-97 | 288 |
| MS.gene025928.t1 | AT5G48970 | 26.923 | 338 | 201 | 11 | 17 | 332 | 15 | 328 | 3.46e-24 | 101 |
| MS.gene025928.t1 | AT3G55640 | 30.078 | 256 | 153 | 7 | 88 | 335 | 85 | 322 | 3.67e-21 | 93.2 |
| MS.gene025928.t1 | AT3G55640 | 30.078 | 256 | 153 | 7 | 88 | 335 | 85 | 322 | 3.67e-21 | 93.2 |
| MS.gene025928.t1 | AT3G21390 | 25.000 | 332 | 203 | 12 | 22 | 333 | 20 | 325 | 4.93e-19 | 87.0 |
| MS.gene025928.t1 | AT3G21390 | 25.000 | 332 | 203 | 12 | 22 | 333 | 42 | 347 | 5.99e-19 | 87.0 |
| MS.gene025928.t1 | AT5G48970 | 27.099 | 262 | 161 | 8 | 89 | 332 | 8 | 257 | 1.02e-18 | 85.1 |
| MS.gene025928.t1 | AT3G53940 | 28.409 | 264 | 155 | 7 | 88 | 339 | 120 | 361 | 1.26e-18 | 86.3 |
| MS.gene025928.t1 | AT5G51050 | 25.271 | 277 | 177 | 8 | 68 | 339 | 245 | 496 | 8.02e-18 | 84.7 |
| MS.gene025928.t1 | AT2G37890 | 27.027 | 259 | 163 | 7 | 88 | 338 | 92 | 332 | 6.55e-17 | 80.9 |
| MS.gene025928.t1 | AT5G56450 | 22.910 | 323 | 214 | 7 | 21 | 339 | 35 | 326 | 1.34e-16 | 80.1 |
| MS.gene025928.t1 | AT5G58970 | 24.768 | 323 | 207 | 8 | 13 | 335 | 9 | 295 | 2.17e-16 | 79.0 |
| MS.gene025928.t1 | AT4G26180 | 26.740 | 273 | 168 | 9 | 81 | 339 | 56 | 310 | 5.77e-16 | 78.2 |
| MS.gene025928.t1 | AT4G32400 | 23.292 | 322 | 200 | 5 | 17 | 338 | 111 | 385 | 3.43e-15 | 76.3 |
| MS.gene025928.t1 | AT5G07320 | 22.481 | 258 | 178 | 5 | 78 | 335 | 238 | 473 | 6.87e-15 | 75.9 |
| MS.gene025928.t1 | AT4G11440 | 26.370 | 292 | 173 | 7 | 59 | 339 | 344 | 604 | 1.09e-14 | 75.5 |
| MS.gene025928.t1 | AT4G11440 | 26.370 | 292 | 173 | 7 | 59 | 339 | 344 | 604 | 1.09e-14 | 75.5 |
| MS.gene025928.t1 | AT5G58970 | 25.362 | 276 | 174 | 8 | 13 | 287 | 9 | 253 | 1.87e-14 | 73.2 |
| MS.gene025928.t1 | AT3G54110 | 23.734 | 316 | 202 | 9 | 23 | 336 | 18 | 296 | 2.30e-13 | 70.1 |
| MS.gene025928.t1 | AT2G22500 | 25.234 | 321 | 203 | 9 | 26 | 335 | 12 | 306 | 3.90e-13 | 69.7 |
| MS.gene025928.t1 | AT4G26180 | 26.613 | 248 | 150 | 9 | 81 | 314 | 56 | 285 | 4.08e-13 | 69.3 |
| MS.gene025928.t1 | AT1G14560 | 26.277 | 274 | 165 | 11 | 81 | 335 | 62 | 317 | 7.03e-13 | 68.9 |
| MS.gene025928.t1 | AT4G01100 | 26.301 | 346 | 188 | 15 | 19 | 338 | 40 | 344 | 8.74e-13 | 68.9 |
| MS.gene025928.t1 | AT4G01100 | 26.531 | 294 | 170 | 12 | 70 | 338 | 22 | 294 | 9.10e-13 | 68.6 |
| MS.gene025928.t1 | AT5G61810 | 23.755 | 261 | 171 | 7 | 81 | 338 | 97 | 332 | 1.45e-12 | 68.2 |
| MS.gene025928.t1 | AT5G61810 | 24.521 | 261 | 169 | 8 | 81 | 338 | 240 | 475 | 2.09e-12 | 68.2 |
| MS.gene025928.t1 | AT5G46800 | 24.679 | 312 | 200 | 8 | 32 | 339 | 20 | 300 | 1.32e-11 | 65.1 |
| MS.gene025928.t1 | AT5G46800 | 24.679 | 312 | 200 | 8 | 32 | 339 | 20 | 300 | 1.32e-11 | 65.1 |
| MS.gene025928.t1 | AT5G46800 | 24.679 | 312 | 200 | 8 | 32 | 339 | 20 | 300 | 1.32e-11 | 65.1 |
| MS.gene025928.t1 | AT4G24570 | 25.078 | 319 | 208 | 9 | 26 | 335 | 12 | 308 | 3.03e-11 | 63.9 |
| MS.gene025928.t1 | AT4G01100 | 25.762 | 361 | 185 | 17 | 19 | 338 | 40 | 358 | 7.19e-11 | 63.2 |
Find 91 sgRNAs with CRISPR-Local
Find 225 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGATATCTTCCGCAACTTTA+TGG | 0.132748 | 7.1:-1082286 | MS.gene025928:CDS |
| GAACAACATTGCTTGAAATT+TGG | 0.154638 | 7.1:-1080431 | MS.gene025928:CDS |
| GGGACAGGGATGGAGGATTT+AGG | 0.160290 | 7.1:-1080267 | MS.gene025928:intron |
| GTCATCTTTAATGCCCTTTC+AGG | 0.166030 | 7.1:+1080459 | None:intergenic |
| GGAACATAAGGCGTTAAATT+TGG | 0.187425 | 7.1:+1082240 | None:intergenic |
| AGTTGATTGTCTATGATTTA+AGG | 0.212914 | 7.1:+1080156 | None:intergenic |
| AGAATACTTGTTCCCTTGTC+TGG | 0.217109 | 7.1:+1081658 | None:intergenic |
| TAGTACACAGGTACCGTTTC+TGG | 0.251953 | 7.1:-1081477 | MS.gene025928:CDS |
| GGTTAATTGCGCGTCGGAAT+TGG | 0.278013 | 7.1:+1083354 | None:intergenic |
| ATACTTGACAACTTCGTAAA+AGG | 0.294575 | 7.1:+1080180 | None:intergenic |
| GGACAGGGATGGAGGATTTA+GGG | 0.304513 | 7.1:-1080266 | MS.gene025928:intron |
| GGCTTGGAGCACAACTTTCT+AGG | 0.304746 | 7.1:-1081447 | MS.gene025928:CDS |
| TGTACTACACCTGCATATAA+AGG | 0.313117 | 7.1:-1082998 | MS.gene025928:CDS |
| CGTTTCTGGTGGACTGGGCT+TGG | 0.324948 | 7.1:-1081463 | MS.gene025928:CDS |
| TTCCATACTCTGCAATTTGC+TGG | 0.354950 | 7.1:-1081420 | MS.gene025928:CDS |
| TGCAAGTTCTACAGGATAAC+AGG | 0.358144 | 7.1:+1082176 | None:intergenic |
| GAGAGGCACAAATGCTAGTT+TGG | 0.364429 | 7.1:-1082502 | MS.gene025928:CDS |
| GCAAGTGATCCTGCTACTAA+TGG | 0.377970 | 7.1:+1082219 | None:intergenic |
| GACCAGCAAATTGCAGAGTA+TGG | 0.391724 | 7.1:+1081418 | None:intergenic |
| CAAGTGCCACAGCTGTCCTT+GGG | 0.398207 | 7.1:-1081248 | MS.gene025928:CDS |
| GCAAGTGCCACAGCTGTCCT+TGG | 0.401027 | 7.1:-1081249 | MS.gene025928:CDS |
| AGGTACCGTTTCTGGTGGAC+TGG | 0.406869 | 7.1:-1081469 | MS.gene025928:CDS |
| CGAGTCCTTGCAAGTTCTAC+AGG | 0.427883 | 7.1:+1082168 | None:intergenic |
| ACAGTGTTAGTTTGAAAAGA+AGG | 0.433649 | 7.1:+1083126 | None:intergenic |
| AGACTTCAATCGCAAGCTGC+TGG | 0.446199 | 7.1:-1083180 | MS.gene025928:CDS |
| AGGATCACTTGCACGCTCAT+TGG | 0.449837 | 7.1:-1082208 | MS.gene025928:CDS |
| ATTTGTGCCTCTCCACAATC+TGG | 0.449957 | 7.1:+1082512 | None:intergenic |
| GTACTACACCTGCATATAAA+GGG | 0.450097 | 7.1:-1082997 | MS.gene025928:CDS |
| GATGAAAGCGGCGCCGGCGG+CGG | 0.462321 | 7.1:+1083312 | None:intergenic |
| GGAGATGAAAGCGGCGCCGG+CGG | 0.463551 | 7.1:+1083309 | None:intergenic |
| GCGACAATCCTCCAGGTGTA+TGG | 0.467230 | 7.1:-1081705 | MS.gene025928:CDS |
| GAATACTTGTTCCCTTGTCT+GGG | 0.471188 | 7.1:+1081659 | None:intergenic |
| CAACATTGCTTGAAATTTGG+AGG | 0.471970 | 7.1:-1080428 | MS.gene025928:intron |
| GCTCCCCGTGTAGGTCGTGC+TGG | 0.474861 | 7.1:-1080226 | MS.gene025928:CDS |
| GACAGGGATGGAGGATTTAG+GGG | 0.476159 | 7.1:-1080265 | MS.gene025928:intron |
| ACCTACACGGGGAGCAATGC+CGG | 0.477293 | 7.1:+1080234 | None:intergenic |
| GGCGGAGATGAAAGCGGCGC+CGG | 0.478622 | 7.1:+1083306 | None:intergenic |
| CTCTAACCTCTATCTGTCGT+CGG | 0.479758 | 7.1:+1081151 | None:intergenic |
| AATAAAATCTTACCGGCTCA+AGG | 0.482311 | 7.1:+1081392 | None:intergenic |
| CCTGCTACTAATGGAACATA+AGG | 0.485889 | 7.1:+1082228 | None:intergenic |
| CACAAATGCTAGTTTGGCAT+TGG | 0.489693 | 7.1:-1082496 | MS.gene025928:CDS |
| GAACGCGCTTTATCCGCCGC+CGG | 0.495533 | 7.1:-1083325 | MS.gene025928:CDS |
| GCTTGGAGCACAACTTTCTA+GGG | 0.502357 | 7.1:-1081446 | MS.gene025928:CDS |
| ATCAGCTGCCACGTGTCCGC+TGG | 0.503371 | 7.1:-1081187 | MS.gene025928:CDS |
| CCTTATGTTCCATTAGTAGC+AGG | 0.504743 | 7.1:-1082228 | MS.gene025928:CDS |
| TGCCACGTGTCCGCTGGACG+TGG | 0.515192 | 7.1:-1081181 | MS.gene025928:CDS |
| TCTATCGTCCCTTTATATGC+AGG | 0.519442 | 7.1:+1082989 | None:intergenic |
| ACAGGGATGGAGGATTTAGG+GGG | 0.521269 | 7.1:-1080264 | MS.gene025928:intron |
| GGTGTATGGAAGACATTACT+TGG | 0.524244 | 7.1:-1081691 | MS.gene025928:CDS |
| TTGCTGGTCAACCCTTGAGC+CGG | 0.524286 | 7.1:-1081404 | MS.gene025928:intron |
| ACACAAGGCGACAATCCTCC+AGG | 0.525728 | 7.1:-1081712 | MS.gene025928:CDS |
| CAAGCCCAGTCCACCAGAAA+CGG | 0.526927 | 7.1:+1081464 | None:intergenic |
| GGTACCGTTTCTGGTGGACT+GGG | 0.527389 | 7.1:-1081468 | MS.gene025928:CDS |
| TCTAACCTCTATCTGTCGTC+GGG | 0.533502 | 7.1:+1081152 | None:intergenic |
| GGTACCTTGGCGACGTCGAG+TGG | 0.539208 | 7.1:+1083271 | None:intergenic |
| ATTTGATAAACGTCATGGTA+AGG | 0.540492 | 7.1:+1083153 | None:intergenic |
| ATAAAATCTTACCGGCTCAA+GGG | 0.547639 | 7.1:+1081393 | None:intergenic |
| TTCCCAGAAGGATCCTGAAA+GGG | 0.553074 | 7.1:-1080472 | MS.gene025928:intron |
| GGTCGTGCTGGTCCATCTGT+TGG | 0.563416 | 7.1:-1080214 | MS.gene025928:CDS |
| ACTTGCAAGGACTCGCATGC+AGG | 0.564082 | 7.1:-1082160 | MS.gene025928:intron |
| TGGACCAGCACGACCTACAC+GGG | 0.568914 | 7.1:+1080222 | None:intergenic |
| ACTCTACAAAGTTATACGTC+AGG | 0.569612 | 7.1:-1082963 | MS.gene025928:intron |
| GATGAATTTGATAAACGTCA+TGG | 0.582753 | 7.1:+1083148 | None:intergenic |
| AGGAAGGATTTACCAGATTG+TGG | 0.583228 | 7.1:-1082524 | MS.gene025928:CDS |
| AGTAATGTCTTCCATACACC+TGG | 0.588893 | 7.1:+1081694 | None:intergenic |
| AAGATAGCTTACACTTGGCA+TGG | 0.593539 | 7.1:+1082473 | None:intergenic |
| ACCGGCATTGCTCCCCGTGT+AGG | 0.596855 | 7.1:-1080235 | MS.gene025928:CDS |
| AACGATGGTTAATTGCGCGT+CGG | 0.598546 | 7.1:+1083348 | None:intergenic |
| GAGACAACTATGCCAACAGA+TGG | 0.599335 | 7.1:+1080202 | None:intergenic |
| ATTCCCAGAAGGATCCTGAA+AGG | 0.603384 | 7.1:-1080473 | MS.gene025928:intron |
| TGCCACGTCCAGCGGACACG+TGG | 0.606347 | 7.1:+1081179 | None:intergenic |
| ATGGACCAGCACGACCTACA+CGG | 0.609123 | 7.1:+1080221 | None:intergenic |
| TGGAGTCATCAACCCAGACA+AGG | 0.612286 | 7.1:-1081671 | MS.gene025928:CDS |
| GTTATCCTGTAGAACTTGCA+AGG | 0.616548 | 7.1:-1082173 | MS.gene025928:CDS |
| CAATCCACTCGACGTCGCCA+AGG | 0.620027 | 7.1:-1083275 | MS.gene025928:intron |
| GGATAAAGCGCGTTCAACGA+TGG | 0.642039 | 7.1:+1083333 | None:intergenic |
| CGTACTCCTCCATAAAGTTG+CGG | 0.642297 | 7.1:+1082277 | None:intergenic |
| GTCGAGTGGATTGACGATGA+CGG | 0.648207 | 7.1:+1083285 | None:intergenic |
| ATTAGCCCCAAGGACAGCTG+TGG | 0.649342 | 7.1:+1081242 | None:intergenic |
| AAGTGCCACAGCTGTCCTTG+GGG | 0.650546 | 7.1:-1081247 | MS.gene025928:CDS |
| AAATTGTTTAAATAGTACAC+AGG | 0.651661 | 7.1:-1081489 | MS.gene025928:intron |
| TATCTTCCGCAACTTTATGG+AGG | 0.652243 | 7.1:-1082283 | MS.gene025928:CDS |
| GATGACGGCGGAGATGAAAG+CGG | 0.658693 | 7.1:+1083300 | None:intergenic |
| TACACAGGTACCGTTTCTGG+TGG | 0.666185 | 7.1:-1081474 | MS.gene025928:CDS |
| GGACCAGCACGACCTACACG+GGG | 0.671952 | 7.1:+1080223 | None:intergenic |
| TTGCGGAAGATATCATAACA+AGG | 0.676878 | 7.1:+1082294 | None:intergenic |
| TAGGCATTTAGAGTAACACA+AGG | 0.682988 | 7.1:-1081727 | MS.gene025928:CDS |
| GGATTTACCAGATTGTGGAG+AGG | 0.683620 | 7.1:-1082519 | MS.gene025928:CDS |
| GGAGTCATCAACCCAGACAA+GGG | 0.683830 | 7.1:-1081670 | MS.gene025928:CDS |
| AATGTCTTCCATACACCTGG+AGG | 0.685433 | 7.1:+1081697 | None:intergenic |
| GAGTGGATTGACGATGACGG+CGG | 0.727354 | 7.1:+1083288 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAATATAATAAAATCTTAC+CGG | + | chr7.1:1082141-1082160 | None:intergenic | 10.0% |
| !! | AATAATTACTTACTATTAAG+AGG | - | chr7.1:1080954-1080973 | MS.gene025928:intron | 15.0% |
| !! | ATAATTACTTACTATTAAGA+GGG | - | chr7.1:1080955-1080974 | MS.gene025928:intron | 15.0% |
| !! | AAAAAAATTCTTGGATTTGT+TGG | - | chr7.1:1082244-1082263 | MS.gene025928:CDS | 20.0% |
| !! | AAATTGTTTAAATAGTACAC+AGG | - | chr7.1:1082034-1082053 | MS.gene025928:intron | 20.0% |
| !! | AATCAAAGTAATTACTATTG+AGG | + | chr7.1:1082014-1082033 | None:intergenic | 20.0% |
| !! | AGAAATAACATAATCTACAA+TGG | + | chr7.1:1083169-1083188 | None:intergenic | 20.0% |
| !! | TCAATTCAATACTATATTTG+CGG | - | chr7.1:1080460-1080479 | MS.gene025928:CDS | 20.0% |
| !! | TCTTTATAATTCATTCTCTA+AGG | - | chr7.1:1081708-1081727 | MS.gene025928:CDS | 20.0% |
| !!! | AACAAAACTTGCATAATTTT+CGG | - | chr7.1:1082916-1082935 | MS.gene025928:intron | 20.0% |
| !!! | AACCTGTTTTTGAAAATATT+AGG | - | chr7.1:1080829-1080848 | MS.gene025928:intron | 20.0% |
| !!! | AATGATTATACTGTTCATTT+TGG | - | chr7.1:1081112-1081131 | MS.gene025928:intron | 20.0% |
| !!! | CATACTTTTTTGCTAAAAAA+TGG | - | chr7.1:1083015-1083034 | MS.gene025928:CDS | 20.0% |
| !!! | CATTATTTTTGAAGTGATAT+TGG | - | chr7.1:1083123-1083142 | MS.gene025928:intron | 20.0% |
| !!! | CATTTTTTAGCAAAAAAGTA+TGG | + | chr7.1:1083017-1083036 | None:intergenic | 20.0% |
| !!! | TACTTTTTCTTCATATTTTC+AGG | + | chr7.1:1081587-1081606 | None:intergenic | 20.0% |
| !!! | TATTCTATTTCCTTGATTTT+AGG | + | chr7.1:1081554-1081573 | None:intergenic | 20.0% |
| !!! | TTACAAACTTTCAACTTTTT+TGG | - | chr7.1:1082609-1082628 | MS.gene025928:intron | 20.0% |
| !!! | TTCAATACTTTTTTGTTTTC+AGG | - | chr7.1:1080485-1080504 | MS.gene025928:intron | 20.0% |
| !!! | TTCTGGTTACAAATATATTT+GGG | - | chr7.1:1080779-1080798 | MS.gene025928:intron | 20.0% |
| !!! | TTTCTGGTTACAAATATATT+TGG | - | chr7.1:1080778-1080797 | MS.gene025928:intron | 20.0% |
| ! | AAATGTAGTACGATTGTATA+AGG | + | chr7.1:1082773-1082792 | None:intergenic | 25.0% |
| ! | AAGTGTGATATAGTTAGAAT+TGG | - | chr7.1:1082855-1082874 | MS.gene025928:intron | 25.0% |
| ! | ACACTAATAAAAGCAACTAA+TGG | - | chr7.1:1081652-1081671 | MS.gene025928:CDS | 25.0% |
| ! | ACGAAAACGAAATTAAAATG+TGG | + | chr7.1:1082520-1082539 | None:intergenic | 25.0% |
| ! | AGTGTGATATAGTTAGAATT+GGG | - | chr7.1:1082856-1082875 | MS.gene025928:intron | 25.0% |
| ! | AGTTGATTGTCTATGATTTA+AGG | + | chr7.1:1083370-1083389 | None:intergenic | 25.0% |
| ! | ATGCATAACTAAACTTTCAT+AGG | - | chr7.1:1082713-1082732 | MS.gene025928:intron | 25.0% |
| ! | CAAATATATTTGGGCTAATA+TGG | - | chr7.1:1080788-1080807 | MS.gene025928:intron | 25.0% |
| ! | CAGATAAGGAAAAAAATTCT+TGG | - | chr7.1:1082235-1082254 | MS.gene025928:CDS | 25.0% |
| ! | CGAAAACGAAATTAAAATGT+GGG | + | chr7.1:1082519-1082538 | None:intergenic | 25.0% |
| ! | GATAAAGTCAATAAGTTAAC+TGG | + | chr7.1:1081755-1081774 | None:intergenic | 25.0% |
| ! | TAAAATTATCACTAAGAGCA+AGG | + | chr7.1:1082403-1082422 | None:intergenic | 25.0% |
| ! | TAACTAAACTTTCATAGGTA+TGG | - | chr7.1:1082718-1082737 | MS.gene025928:intron | 25.0% |
| ! | TAATTGCTATCCTAAAATCA+AGG | - | chr7.1:1081541-1081560 | MS.gene025928:intron | 25.0% |
| ! | TCTAAGGAAATAATGTTATG+TGG | - | chr7.1:1081724-1081743 | MS.gene025928:CDS | 25.0% |
| ! | TTGATATCTGAACTTATTTC+TGG | - | chr7.1:1080762-1080781 | MS.gene025928:intron | 25.0% |
| !! | AGCCTAATATTTTCAAAAAC+AGG | + | chr7.1:1080834-1080853 | None:intergenic | 25.0% |
| !! | ATACAATCGTACTACATTTT+TGG | - | chr7.1:1082774-1082793 | MS.gene025928:intron | 25.0% |
| !! | CTTGTCTGAAATAGAAAAAT+TGG | + | chr7.1:1080325-1080344 | None:intergenic | 25.0% |
| !! | GATCATTATATTTGACTTCT+GGG | + | chr7.1:1082453-1082472 | None:intergenic | 25.0% |
| !! | TGATCATTATATTTGACTTC+TGG | + | chr7.1:1082454-1082473 | None:intergenic | 25.0% |
| !!! | TACATGTTCCCTTTTATTTA+GGG | + | chr7.1:1080863-1080882 | None:intergenic | 25.0% |
| !!! | TCTTCATATTTTCAGGTAAT+AGG | + | chr7.1:1081580-1081599 | None:intergenic | 25.0% |
| AAGAAGAATTGGATTGATTG+AGG | + | chr7.1:1080293-1080312 | None:intergenic | 30.0% | |
| AGTTATATACAGTCTACTGA+TGG | - | chr7.1:1081166-1081185 | MS.gene025928:CDS | 30.0% | |
| AGTTTATAGGAGATATGGAA+AGG | - | chr7.1:1080737-1080756 | MS.gene025928:intron | 30.0% | |
| ATACTTGACAACTTCGTAAA+AGG | + | chr7.1:1083346-1083365 | None:intergenic | 30.0% | |
| ATGCATGAATTTGTCACATT+GGG | - | chr7.1:1082805-1082824 | MS.gene025928:intron | 30.0% | |
| ATTTGATAAACGTCATGGTA+AGG | + | chr7.1:1080373-1080392 | None:intergenic | 30.0% | |
| CATATCTCCTATAAACTTAG+GGG | + | chr7.1:1080734-1080753 | None:intergenic | 30.0% | |
| CCATATCTCCTATAAACTTA+GGG | + | chr7.1:1080735-1080754 | None:intergenic | 30.0% | |
| CTAAATAAAAGGGAACATGT+AGG | - | chr7.1:1080862-1080881 | MS.gene025928:intron | 30.0% | |
| GAACAACATTGCTTGAAATT+TGG | - | chr7.1:1083092-1083111 | MS.gene025928:intron | 30.0% | |
| GATGAATTTGATAAACGTCA+TGG | + | chr7.1:1080378-1080397 | None:intergenic | 30.0% | |
| GGATGAATTTGAAGAAGAAT+TGG | + | chr7.1:1080304-1080323 | None:intergenic | 30.0% | |
| TAAATTCCAACCTATTTGAC+AGG | + | chr7.1:1081205-1081224 | None:intergenic | 30.0% | |
| TATGCATGAATTTGTCACAT+TGG | - | chr7.1:1082804-1082823 | MS.gene025928:intron | 30.0% | |
| TCCATATCTCCTATAAACTT+AGG | + | chr7.1:1080736-1080755 | None:intergenic | 30.0% | |
| TGCAATTTGTAGACTAATGT+GGG | - | chr7.1:1081508-1081527 | MS.gene025928:intron | 30.0% | |
| TTACTCTAAATGCCTAAGAA+CGG | + | chr7.1:1081792-1081811 | None:intergenic | 30.0% | |
| TTGAAATGAAGAAAGCAACT+AGG | + | chr7.1:1080931-1080950 | None:intergenic | 30.0% | |
| TTGCAATTTGTAGACTAATG+TGG | - | chr7.1:1081507-1081526 | MS.gene025928:intron | 30.0% | |
| ! | AATTTTCTCTCTTCACTTCA+TGG | + | chr7.1:1081435-1081454 | None:intergenic | 30.0% |
| ! | ACAGTGTTAGTTTGAAAAGA+AGG | + | chr7.1:1080400-1080419 | None:intergenic | 30.0% |
| ! | CTCTTTTTAATATTCCCAGA+AGG | - | chr7.1:1083039-1083058 | MS.gene025928:intron | 30.0% |
| ! | GTATGATGTCTATGTTCTTT+TGG | - | chr7.1:1081985-1082004 | MS.gene025928:intron | 30.0% |
| ! | TTCGTTTTCGTCCTTAAAAT+CGG | - | chr7.1:1082529-1082548 | MS.gene025928:intron | 30.0% |
| !! | AGATATTCTGCTTTAGGATA+TGG | - | chr7.1:1082632-1082651 | MS.gene025928:intron | 30.0% |
| !! | CTACATGTTCCCTTTTATTT+AGG | + | chr7.1:1080864-1080883 | None:intergenic | 30.0% |
| !! | CTATTAATTTGTATCGCAGT+TGG | + | chr7.1:1080670-1080689 | None:intergenic | 30.0% |
| !! | TTGGGTTTTTCACTTTTCTT+GGG | - | chr7.1:1083236-1083255 | MS.gene025928:intron | 30.0% |
| !! | TTTGGGTTTTTCACTTTTCT+TGG | - | chr7.1:1083235-1083254 | MS.gene025928:intron | 30.0% |
| !! | TTTTGGAGATATTCTGCTTT+AGG | - | chr7.1:1082626-1082645 | MS.gene025928:intron | 30.0% |
| !!! | CAAACTTGTTTTAACTCAGA+AGG | + | chr7.1:1081946-1081965 | None:intergenic | 30.0% |
| !!! | CAGGTTTTAAAATTCCAAAC+AGG | + | chr7.1:1080815-1080834 | None:intergenic | 30.0% |
| ACTCTACAAAGTTATACGTC+AGG | - | chr7.1:1080560-1080579 | MS.gene025928:intron | 35.0% | |
| AGAATTGGATTGATTGAGGA+AGG | + | chr7.1:1080289-1080308 | None:intergenic | 35.0% | |
| AGTGAAGAGAGAAAATTGAC+TGG | - | chr7.1:1081438-1081457 | MS.gene025928:CDS | 35.0% | |
| AGTGTAATCATGTGATGACT+GGG | - | chr7.1:1082964-1082983 | MS.gene025928:CDS | 35.0% | |
| ATTGATTGAGGAAGGTAGAA+AGG | + | chr7.1:1080281-1080300 | None:intergenic | 35.0% | |
| CAACATTGCTTGAAATTTGG+AGG | - | chr7.1:1083095-1083114 | MS.gene025928:intron | 35.0% | |
| CAGAAAAGATAGCTTACACT+TGG | + | chr7.1:1081058-1081077 | None:intergenic | 35.0% | |
| CATAATTATCCTAACTGCGT+TGG | + | chr7.1:1082696-1082715 | None:intergenic | 35.0% | |
| CCCTAAGTTTATAGGAGATA+TGG | - | chr7.1:1080732-1080751 | MS.gene025928:intron | 35.0% | |
| CTGTAGCACCCTAAATAAAA+GGG | - | chr7.1:1080852-1080871 | MS.gene025928:intron | 35.0% | |
| GTACTACACCTGCATATAAA+GGG | - | chr7.1:1080526-1080545 | MS.gene025928:intron | 35.0% | |
| GTCATTTAGTGCATAGACTT+TGG | - | chr7.1:1083206-1083225 | MS.gene025928:intron | 35.0% | |
| GTTGGATCTATTTGCAGATA+AGG | - | chr7.1:1082221-1082240 | MS.gene025928:CDS | 35.0% | |
| TACTCTAAATGCCTAAGAAC+GGG | + | chr7.1:1081791-1081810 | None:intergenic | 35.0% | |
| TAGTGTAATCATGTGATGAC+TGG | - | chr7.1:1082963-1082982 | MS.gene025928:intron | 35.0% | |
| TCTTAGTGCATGTATTGAGT+TGG | - | chr7.1:1082203-1082222 | MS.gene025928:CDS | 35.0% | |
| TGATATCTTCCGCAACTTTA+TGG | - | chr7.1:1081237-1081256 | MS.gene025928:CDS | 35.0% | |
| TGTACTACACCTGCATATAA+AGG | - | chr7.1:1080525-1080544 | MS.gene025928:intron | 35.0% | |
| TTACTATTAAGAGGGTTCAC+AGG | - | chr7.1:1080963-1080982 | MS.gene025928:intron | 35.0% | |
| TTCGTGTTGTAAACTGATAG+AGG | - | chr7.1:1080587-1080606 | MS.gene025928:intron | 35.0% | |
| TTGATTGAGGAAGGTAGAAA+GGG | + | chr7.1:1080280-1080299 | None:intergenic | 35.0% | |
| TTGCGGAAGATATCATAACA+AGG | + | chr7.1:1081232-1081251 | None:intergenic | 35.0% | |
| TTGTTAAACTGTTGTAGGCT+TGG | - | chr7.1:1082881-1082900 | MS.gene025928:intron | 35.0% | |
| ! | ATAGACTTTGGACTGACTTT+GGG | - | chr7.1:1083218-1083237 | MS.gene025928:intron | 35.0% |
| ! | ATTATATTTGACTTCTGGGC+AGG | + | chr7.1:1082449-1082468 | None:intergenic | 35.0% |
| ! | GGAACATAAGGCGTTAAATT+TGG | + | chr7.1:1081286-1081305 | None:intergenic | 35.0% |
| ! | TAGGCATTTAGAGTAACACA+AGG | - | chr7.1:1081796-1081815 | MS.gene025928:intron | 35.0% |
| !! | AATAAAATCTTACCGGCTCA+AGG | + | chr7.1:1082134-1082153 | None:intergenic | 35.0% |
| !! | ATAAAATCTTACCGGCTCAA+GGG | + | chr7.1:1082133-1082152 | None:intergenic | 35.0% |
| !! | GACAATCTTCTAGAATGTAC+TGG | - | chr7.1:1080611-1080630 | MS.gene025928:intron | 35.0% |
| !! | TTTTCACTTTTCTTGGGACA+GGG | - | chr7.1:1083242-1083261 | MS.gene025928:intron | 35.0% |
| !! | TTTTTCACTTTTCTTGGGAC+AGG | - | chr7.1:1083241-1083260 | MS.gene025928:intron | 35.0% |
| !!! | TTTCATGTGTGTTGCTTTTG+AGG | - | chr7.1:1081089-1081108 | MS.gene025928:intron | 35.0% |
| AAGATAGCTTACACTTGGCA+TGG | + | chr7.1:1081053-1081072 | None:intergenic | 40.0% | |
| AGAATACTTGTTCCCTTGTC+TGG | + | chr7.1:1081868-1081887 | None:intergenic | 40.0% | |
| AGGAAGGATTTACCAGATTG+TGG | - | chr7.1:1080999-1081018 | MS.gene025928:intron | 40.0% | |
| AGGAGTGAATTTATGCAGGA+AGG | - | chr7.1:1080983-1081002 | MS.gene025928:intron | 40.0% | |
| AGTAATGTCTTCCATACACC+TGG | + | chr7.1:1081832-1081851 | None:intergenic | 40.0% | |
| ATACAGTCTACTGATGGTCT+GGG | - | chr7.1:1081172-1081191 | MS.gene025928:CDS | 40.0% | |
| ATTCGTCCATCTTAGAGAGA+AGG | - | chr7.1:1080691-1080710 | MS.gene025928:intron | 40.0% | |
| CCACAGCGTTGTATTAGTAT+AGG | + | chr7.1:1081686-1081705 | None:intergenic | 40.0% | |
| CCTATACTAATACAACGCTG+TGG | - | chr7.1:1081683-1081702 | MS.gene025928:CDS | 40.0% | |
| CCTGCTACTAATGGAACATA+AGG | + | chr7.1:1081298-1081317 | None:intergenic | 40.0% | |
| CCTTATGTTCCATTAGTAGC+AGG | - | chr7.1:1081295-1081314 | MS.gene025928:intron | 40.0% | |
| GAATACTTGTTCCCTTGTCT+GGG | + | chr7.1:1081867-1081886 | None:intergenic | 40.0% | |
| GCTGTAGCACCCTAAATAAA+AGG | - | chr7.1:1080851-1080870 | MS.gene025928:intron | 40.0% | |
| GGAAATTTGACTCTTGTCAG+TGG | + | chr7.1:1082498-1082517 | None:intergenic | 40.0% | |
| GGATTTAGGGGGTTATTTAC+CGG | - | chr7.1:1083270-1083289 | MS.gene025928:intron | 40.0% | |
| GGGTTTACCCCTAAGTTTAT+AGG | - | chr7.1:1080724-1080743 | MS.gene025928:intron | 40.0% | |
| GGTGTATGGAAGACATTACT+TGG | - | chr7.1:1081832-1081851 | MS.gene025928:intron | 40.0% | |
| GTCATCTTTAATGCCCTTTC+AGG | + | chr7.1:1083067-1083086 | None:intergenic | 40.0% | |
| GTGTTTCCTGTCAAATAGGT+TGG | - | chr7.1:1081196-1081215 | MS.gene025928:CDS | 40.0% | |
| GTTATCCTGTAGAACTTGCA+AGG | - | chr7.1:1081350-1081369 | MS.gene025928:intron | 40.0% | |
| TATACAGTCTACTGATGGTC+TGG | - | chr7.1:1081171-1081190 | MS.gene025928:CDS | 40.0% | |
| TATCTTCCGCAACTTTATGG+AGG | - | chr7.1:1081240-1081259 | MS.gene025928:CDS | 40.0% | |
| TCACAGGAGTGAATTTATGC+AGG | - | chr7.1:1080979-1080998 | MS.gene025928:intron | 40.0% | |
| TCTATCGTCCCTTTATATGC+AGG | + | chr7.1:1080537-1080556 | None:intergenic | 40.0% | |
| TGCAAGTTCTACAGGATAAC+AGG | + | chr7.1:1081350-1081369 | None:intergenic | 40.0% | |
| TTCCATACTCTGCAATTTGC+TGG | - | chr7.1:1082103-1082122 | MS.gene025928:intron | 40.0% | |
| TTCGTCCATCTTAGAGAGAA+GGG | - | chr7.1:1080692-1080711 | MS.gene025928:intron | 40.0% | |
| ! | ACATGTTTTCTCCCGTTCTT+AGG | - | chr7.1:1081777-1081796 | MS.gene025928:intron | 40.0% |
| ! | CACAAATGCTAGTTTGGCAT+TGG | - | chr7.1:1081027-1081046 | MS.gene025928:intron | 40.0% |
| ! | CATAGACTTTGGACTGACTT+TGG | - | chr7.1:1083217-1083236 | MS.gene025928:intron | 40.0% |
| ! | GGGCATTGTTAAACTGTTGT+AGG | - | chr7.1:1082876-1082895 | MS.gene025928:intron | 40.0% |
| ! | GTTTTCGTCCTTAAAATCGG+TGG | - | chr7.1:1082532-1082551 | MS.gene025928:intron | 40.0% |
| !! | GCTAGGAGCACAATTTTCTA+GGG | - | chr7.1:1082986-1083005 | MS.gene025928:CDS | 40.0% |
| !! | TCTGCTTTAGGATATGGCAT+TGG | - | chr7.1:1082638-1082657 | MS.gene025928:intron | 40.0% |
| !!! | TCTTAGCTCCACCGATTTTA+AGG | + | chr7.1:1082543-1082562 | None:intergenic | 40.0% |
| !!! | TTTTCTGCTGGTTTTGTAGC+AGG | - | chr7.1:1082304-1082323 | MS.gene025928:CDS | 40.0% |
| AAAAACCCGACGACAGATAG+AGG | - | chr7.1:1082366-1082385 | MS.gene025928:intron | 45.0% | |
| AACGATGGTTAATTGCGCGT+CGG | + | chr7.1:1080178-1080197 | None:intergenic | 45.0% | |
| AATCATGTGATGACTGGGCT+AGG | - | chr7.1:1082969-1082988 | MS.gene025928:CDS | 45.0% | |
| AATGTCTTCCATACACCTGG+AGG | + | chr7.1:1081829-1081848 | None:intergenic | 45.0% | |
| ATTCCCAGAAGGATCCTGAA+AGG | - | chr7.1:1083050-1083069 | MS.gene025928:intron | 45.0% | |
| ATTTGTGCCTCTCCACAATC+TGG | + | chr7.1:1081014-1081033 | None:intergenic | 45.0% | |
| CAGCAGAAAAATTAGCCCCA+AGG | + | chr7.1:1082294-1082313 | None:intergenic | 45.0% | |
| CGTACTCCTCCATAAAGTTG+CGG | + | chr7.1:1081249-1081268 | None:intergenic | 45.0% | |
| CTCTAACCTCTATCTGTCGT+CGG | + | chr7.1:1082375-1082394 | None:intergenic | 45.0% | |
| GACCAGCAAATTGCAGAGTA+TGG | + | chr7.1:1082108-1082127 | None:intergenic | 45.0% | |
| GAGACAACTATGCCAACAGA+TGG | + | chr7.1:1083324-1083343 | None:intergenic | 45.0% | |
| GCAAGTGATCCTGCTACTAA+TGG | + | chr7.1:1081307-1081326 | None:intergenic | 45.0% | |
| GCTTGGAGCACAACTTTCTA+GGG | - | chr7.1:1082077-1082096 | MS.gene025928:intron | 45.0% | |
| GGATTTACCAGATTGTGGAG+AGG | - | chr7.1:1081004-1081023 | MS.gene025928:intron | 45.0% | |
| GGGTGTGTTTCCTGTCAAAT+AGG | - | chr7.1:1081192-1081211 | MS.gene025928:CDS | 45.0% | |
| TCGTCCATCTTAGAGAGAAG+GGG | - | chr7.1:1080693-1080712 | MS.gene025928:intron | 45.0% | |
| TCTAACCTCTATCTGTCGTC+GGG | + | chr7.1:1082374-1082393 | None:intergenic | 45.0% | |
| TGGGCTAATATGGACCTGTT+TGG | - | chr7.1:1080798-1080817 | MS.gene025928:intron | 45.0% | |
| TTCCCAGAAGGATCCTGAAA+GGG | - | chr7.1:1083051-1083070 | MS.gene025928:intron | 45.0% | |
| TTGAGGAAGGTAGAAAGGGT+AGG | + | chr7.1:1080276-1080295 | None:intergenic | 45.0% | |
| ! | CTTGGGGCTAATTTTTCTGC+TGG | - | chr7.1:1082292-1082311 | MS.gene025928:CDS | 45.0% |
| ! | GAGAGGCACAAATGCTAGTT+TGG | - | chr7.1:1081021-1081040 | MS.gene025928:intron | 45.0% |
| ! | TAGTACACAGGTACCGTTTC+TGG | - | chr7.1:1082046-1082065 | MS.gene025928:intron | 45.0% |
| !! | GGCTAGGAGCACAATTTTCT+AGG | - | chr7.1:1082985-1083004 | MS.gene025928:CDS | 45.0% |
| ACAGGGATGGAGGATTTAGG+GGG | - | chr7.1:1083259-1083278 | MS.gene025928:intron | 50.0% | |
| AGACTTCAATCGCAAGCTGC+TGG | - | chr7.1:1080343-1080362 | MS.gene025928:intron | 50.0% | |
| AGGATCACTTGCACGCTCAT+TGG | - | chr7.1:1081315-1081334 | MS.gene025928:intron | 50.0% | |
| ATGCCCTTTCAGGATCCTTC+TGG | + | chr7.1:1083057-1083076 | None:intergenic | 50.0% | |
| CGAGTCCTTGCAAGTTCTAC+AGG | + | chr7.1:1081358-1081377 | None:intergenic | 50.0% | |
| CGTCCATCTTAGAGAGAAGG+GGG | - | chr7.1:1080694-1080713 | MS.gene025928:intron | 50.0% | |
| GACAGGGATGGAGGATTTAG+GGG | - | chr7.1:1083258-1083277 | MS.gene025928:intron | 50.0% | |
| GGACAGGGATGGAGGATTTA+GGG | - | chr7.1:1083257-1083276 | MS.gene025928:intron | 50.0% | |
| GGAGTCATCAACCCAGACAA+GGG | - | chr7.1:1081853-1081872 | MS.gene025928:intron | 50.0% | |
| GGATAAAGCGCGTTCAACGA+TGG | + | chr7.1:1080193-1080212 | None:intergenic | 50.0% | |
| GGCTTGGAGCACAACTTTCT+AGG | - | chr7.1:1082076-1082095 | MS.gene025928:intron | 50.0% | |
| GGTAGAAAGGGTAGGTACCT+TGG | + | chr7.1:1080268-1080287 | None:intergenic | 50.0% | |
| GGTTAATTGCGCGTCGGAAT+TGG | + | chr7.1:1080172-1080191 | None:intergenic | 50.0% | |
| TGACTTCTGGGCAGGAAGTA+AGG | + | chr7.1:1082441-1082460 | None:intergenic | 50.0% | |
| TGCCCTTTCAGGATCCTTCT+GGG | + | chr7.1:1083056-1083075 | None:intergenic | 50.0% | |
| TGGAGTCATCAACCCAGACA+AGG | - | chr7.1:1081852-1081871 | MS.gene025928:intron | 50.0% | |
| ! | ACTCCCCCTTCTCTCTAAGA+TGG | + | chr7.1:1080700-1080719 | None:intergenic | 50.0% |
| ! | CACTTTTCTTGGGACAGGGA+TGG | - | chr7.1:1083246-1083265 | MS.gene025928:intron | 50.0% |
| ! | TACACAGGTACCGTTTCTGG+TGG | - | chr7.1:1082049-1082068 | MS.gene025928:intron | 50.0% |
| ! | TTTTCTTGGGACAGGGATGG+AGG | - | chr7.1:1083249-1083268 | MS.gene025928:intron | 50.0% |
| !! | AGAGAGAAGGGGGAGTATCA+GGG | - | chr7.1:1080704-1080723 | MS.gene025928:intron | 50.0% |
| !! | GTCGAGTGGATTGACGATGA+CGG | + | chr7.1:1080241-1080260 | None:intergenic | 50.0% |
| !! | TAGAGAGAAGGGGGAGTATC+AGG | - | chr7.1:1080703-1080722 | MS.gene025928:intron | 50.0% |
| AAGTGCCACAGCTGTCCTTG+GGG | - | chr7.1:1082276-1082295 | MS.gene025928:CDS | 55.0% | |
| ACACAAGGCGACAATCCTCC+AGG | - | chr7.1:1081811-1081830 | MS.gene025928:intron | 55.0% | |
| ACTTGCAAGGACTCGCATGC+AGG | - | chr7.1:1081363-1081382 | MS.gene025928:intron | 55.0% | |
| ATGGACCAGCACGACCTACA+CGG | + | chr7.1:1083305-1083324 | None:intergenic | 55.0% | |
| ATTAGCCCCAAGGACAGCTG+TGG | + | chr7.1:1082284-1082303 | None:intergenic | 55.0% | |
| CAAGCCCAGTCCACCAGAAA+CGG | + | chr7.1:1082062-1082081 | None:intergenic | 55.0% | |
| CAAGTGCCACAGCTGTCCTT+GGG | - | chr7.1:1082275-1082294 | MS.gene025928:CDS | 55.0% | |
| GCGACAATCCTCCAGGTGTA+TGG | - | chr7.1:1081818-1081837 | MS.gene025928:intron | 55.0% | |
| GGGACAGGGATGGAGGATTT+AGG | - | chr7.1:1083256-1083275 | MS.gene025928:intron | 55.0% | |
| TGCACACTGCCAACGCAGTT+AGG | - | chr7.1:1082684-1082703 | MS.gene025928:intron | 55.0% | |
| TTGCTGGTCAACCCTTGAGC+CGG | - | chr7.1:1082119-1082138 | MS.gene025928:intron | 55.0% | |
| ! | GATGACGGCGGAGATGAAAG+CGG | + | chr7.1:1080226-1080245 | None:intergenic | 55.0% |
| !! | AGGTACCGTTTCTGGTGGAC+TGG | - | chr7.1:1082054-1082073 | MS.gene025928:intron | 55.0% |
| !! | GAGTGGATTGACGATGACGG+CGG | + | chr7.1:1080238-1080257 | None:intergenic | 55.0% |
| !! | GGTACCGTTTCTGGTGGACT+GGG | - | chr7.1:1082055-1082074 | MS.gene025928:intron | 55.0% |
| ACCTACACGGGGAGCAATGC+CGG | + | chr7.1:1083292-1083311 | None:intergenic | 60.0% | |
| CAATCCACTCGACGTCGCCA+AGG | - | chr7.1:1080248-1080267 | MS.gene025928:CDS | 60.0% | |
| GCAAGTGCCACAGCTGTCCT+TGG | - | chr7.1:1082274-1082293 | MS.gene025928:CDS | 60.0% | |
| TGGACCAGCACGACCTACAC+GGG | + | chr7.1:1083304-1083323 | None:intergenic | 60.0% | |
| ! | CGGGTTTTTGCCACGTCCAG+CGG | + | chr7.1:1082355-1082374 | None:intergenic | 60.0% |
| ! | GGTCGTGCTGGTCCATCTGT+TGG | - | chr7.1:1083309-1083328 | MS.gene025928:CDS | 60.0% |
| !! | CGTTTCTGGTGGACTGGGCT+TGG | - | chr7.1:1082060-1082079 | MS.gene025928:intron | 60.0% |
| ACCGGCATTGCTCCCCGTGT+AGG | - | chr7.1:1083288-1083307 | MS.gene025928:CDS | 65.0% | |
| ATCAGCTGCCACGTGTCCGC+TGG | - | chr7.1:1082336-1082355 | MS.gene025928:intron | 65.0% | |
| GAACGCGCTTTATCCGCCGC+CGG | - | chr7.1:1080198-1080217 | MS.gene025928:CDS | 65.0% | |
| GGACCAGCACGACCTACACG+GGG | + | chr7.1:1083303-1083322 | None:intergenic | 65.0% | |
| GGTACCTTGGCGACGTCGAG+TGG | + | chr7.1:1080255-1080274 | None:intergenic | 65.0% | |
| GCTCCCCGTGTAGGTCGTGC+TGG | - | chr7.1:1083297-1083316 | MS.gene025928:CDS | 70.0% | |
| GGCGGAGATGAAAGCGGCGC+CGG | + | chr7.1:1080220-1080239 | None:intergenic | 70.0% | |
| TGCCACGTCCAGCGGACACG+TGG | + | chr7.1:1082347-1082366 | None:intergenic | 70.0% | |
| TGCCACGTGTCCGCTGGACG+TGG | - | chr7.1:1082342-1082361 | MS.gene025928:intron | 70.0% | |
| ! | GGAGATGAAAGCGGCGCCGG+CGG | + | chr7.1:1080217-1080236 | None:intergenic | 70.0% |
| !! | GATGAAAGCGGCGCCGGCGG+CGG | + | chr7.1:1080214-1080233 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 1080147 | 1083398 | 1080147 | ID=MS.gene025928 |
| chr7.1 | mRNA | 1080147 | 1083398 | 1080147 | ID=MS.gene025928.t1;Parent=MS.gene025928 |
| chr7.1 | exon | 1083276 | 1083398 | 1083276 | ID=MS.gene025928.t1.exon1;Parent=MS.gene025928.t1 |
| chr7.1 | CDS | 1083276 | 1083398 | 1083276 | ID=cds.MS.gene025928.t1;Parent=MS.gene025928.t1 |
| chr7.1 | exon | 1083128 | 1083205 | 1083128 | ID=MS.gene025928.t1.exon2;Parent=MS.gene025928.t1 |
| chr7.1 | CDS | 1083128 | 1083205 | 1083128 | ID=cds.MS.gene025928.t1;Parent=MS.gene025928.t1 |
| chr7.1 | exon | 1082964 | 1083038 | 1082964 | ID=MS.gene025928.t1.exon3;Parent=MS.gene025928.t1 |
| chr7.1 | CDS | 1082964 | 1083038 | 1082964 | ID=cds.MS.gene025928.t1;Parent=MS.gene025928.t1 |
| chr7.1 | exon | 1082485 | 1082544 | 1082485 | ID=MS.gene025928.t1.exon4;Parent=MS.gene025928.t1 |
| chr7.1 | CDS | 1082485 | 1082544 | 1082485 | ID=cds.MS.gene025928.t1;Parent=MS.gene025928.t1 |
| chr7.1 | exon | 1082161 | 1082331 | 1082161 | ID=MS.gene025928.t1.exon5;Parent=MS.gene025928.t1 |
| chr7.1 | CDS | 1082161 | 1082331 | 1082161 | ID=cds.MS.gene025928.t1;Parent=MS.gene025928.t1 |
| chr7.1 | exon | 1081650 | 1081746 | 1081650 | ID=MS.gene025928.t1.exon6;Parent=MS.gene025928.t1 |
| chr7.1 | CDS | 1081650 | 1081746 | 1081650 | ID=cds.MS.gene025928.t1;Parent=MS.gene025928.t1 |
| chr7.1 | exon | 1081405 | 1081496 | 1081405 | ID=MS.gene025928.t1.exon7;Parent=MS.gene025928.t1 |
| chr7.1 | CDS | 1081405 | 1081496 | 1081405 | ID=cds.MS.gene025928.t1;Parent=MS.gene025928.t1 |
| chr7.1 | exon | 1081158 | 1081307 | 1081158 | ID=MS.gene025928.t1.exon8;Parent=MS.gene025928.t1 |
| chr7.1 | CDS | 1081158 | 1081307 | 1081158 | ID=cds.MS.gene025928.t1;Parent=MS.gene025928.t1 |
| chr7.1 | exon | 1080429 | 1080487 | 1080429 | ID=MS.gene025928.t1.exon9;Parent=MS.gene025928.t1 |
| chr7.1 | CDS | 1080429 | 1080487 | 1080429 | ID=cds.MS.gene025928.t1;Parent=MS.gene025928.t1 |
| chr7.1 | exon | 1080147 | 1080282 | 1080147 | ID=MS.gene025928.t1.exon10;Parent=MS.gene025928.t1 |
| chr7.1 | CDS | 1080147 | 1080282 | 1080147 | ID=cds.MS.gene025928.t1;Parent=MS.gene025928.t1 |
| Gene Sequence |
| Protein sequence |
