Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07262.t1 | XP_003591444.2 | 98.6 | 364 | 5 | 0 | 1 | 364 | 1 | 364 | 6.00E-201 | 709.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07262.t1 | P38661 | 97.8 | 364 | 8 | 0 | 1 | 364 | 1 | 364 | 1.4e-201 | 703.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07262.t1 | G7IDU4 | 98.6 | 364 | 5 | 0 | 1 | 364 | 1 | 364 | 4.3e-201 | 709.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07262.t1 | MTR_1g087520 | 98.626 | 364 | 5 | 0 | 1 | 364 | 1 | 364 | 0.0 | 728 |
| MS.gene07262.t1 | MTR_7g112040 | 69.663 | 356 | 108 | 0 | 8 | 363 | 3 | 358 | 0.0 | 528 |
| MS.gene07262.t1 | MTR_5g084930 | 35.714 | 252 | 138 | 6 | 10 | 242 | 5 | 251 | 5.89e-42 | 152 |
| MS.gene07262.t1 | MTR_5g084930 | 50.000 | 104 | 49 | 2 | 147 | 250 | 28 | 128 | 1.74e-24 | 103 |
| MS.gene07262.t1 | MTR_5g084930 | 40.741 | 135 | 72 | 4 | 27 | 159 | 156 | 284 | 2.71e-20 | 92.0 |
| MS.gene07262.t1 | MTR_2g021750 | 50.000 | 104 | 49 | 2 | 147 | 250 | 28 | 128 | 8.32e-24 | 100 |
| MS.gene07262.t1 | MTR_2g021750 | 38.583 | 127 | 70 | 4 | 10 | 131 | 5 | 128 | 1.75e-17 | 83.2 |
| MS.gene07262.t1 | MTR_2g094180 | 35.616 | 219 | 119 | 8 | 31 | 234 | 290 | 501 | 1.11e-23 | 102 |
| MS.gene07262.t1 | MTR_2g094180 | 37.209 | 172 | 88 | 4 | 30 | 200 | 79 | 231 | 5.97e-19 | 88.6 |
| MS.gene07262.t1 | MTR_2g094180 | 38.857 | 175 | 90 | 7 | 149 | 315 | 80 | 245 | 1.20e-17 | 84.7 |
| MS.gene07262.t1 | MTR_2g094180 | 34.483 | 116 | 71 | 3 | 30 | 142 | 417 | 530 | 2.75e-14 | 74.3 |
| MS.gene07262.t1 | MTR_1g096790 | 40.000 | 120 | 69 | 2 | 31 | 149 | 28 | 145 | 2.79e-22 | 97.8 |
| MS.gene07262.t1 | MTR_3g088220 | 46.602 | 103 | 54 | 1 | 149 | 251 | 379 | 480 | 6.30e-22 | 97.4 |
| MS.gene07262.t1 | MTR_3g088220 | 47.872 | 94 | 46 | 2 | 168 | 258 | 53 | 146 | 1.31e-20 | 93.6 |
| MS.gene07262.t1 | MTR_3g088220 | 41.818 | 110 | 61 | 2 | 31 | 137 | 35 | 144 | 4.55e-20 | 91.7 |
| MS.gene07262.t1 | MTR_3g088220 | 41.860 | 86 | 49 | 1 | 47 | 132 | 396 | 480 | 1.26e-15 | 78.6 |
| MS.gene07262.t1 | MTR_4g059450 | 44.318 | 88 | 47 | 1 | 149 | 236 | 440 | 525 | 7.48e-18 | 85.5 |
| MS.gene07262.t1 | MTR_4g059450 | 38.636 | 132 | 77 | 3 | 26 | 156 | 97 | 225 | 2.09e-16 | 80.9 |
| MS.gene07262.t1 | MTR_4g059450 | 43.885 | 139 | 66 | 5 | 149 | 279 | 102 | 236 | 3.09e-16 | 80.5 |
| MS.gene07262.t1 | MTR_4g059450 | 34.259 | 108 | 62 | 4 | 30 | 132 | 439 | 542 | 2.01e-12 | 68.9 |
| MS.gene07262.t1 | MTR_2g049800 | 80.435 | 46 | 9 | 0 | 265 | 310 | 44 | 89 | 2.55e-15 | 72.4 |
| MS.gene07262.t1 | MTR_2g093680 | 33.884 | 121 | 77 | 3 | 18 | 136 | 27 | 146 | 8.83e-15 | 71.6 |
| MS.gene07262.t1 | MTR_2g093680 | 29.524 | 105 | 73 | 1 | 147 | 251 | 39 | 142 | 6.81e-11 | 60.8 |
| MS.gene07262.t1 | MTR_4g080800 | 33.913 | 115 | 62 | 2 | 34 | 134 | 146 | 260 | 8.98e-15 | 75.9 |
| MS.gene07262.t1 | MTR_4g080800 | 30.851 | 94 | 51 | 2 | 169 | 248 | 162 | 255 | 5.67e-11 | 63.9 |
| MS.gene07262.t1 | MTR_1g114290 | 39.535 | 86 | 46 | 2 | 157 | 242 | 78 | 157 | 2.49e-13 | 68.2 |
| MS.gene07262.t1 | MTR_1g098660 | 32.258 | 93 | 60 | 2 | 156 | 248 | 69 | 158 | 5.10e-13 | 67.0 |
| MS.gene07262.t1 | MTR_3g089065 | 35.955 | 89 | 55 | 1 | 145 | 233 | 66 | 152 | 1.62e-12 | 65.9 |
| MS.gene07262.t1 | MTR_2g083260 | 31.356 | 118 | 67 | 2 | 27 | 130 | 139 | 256 | 2.96e-12 | 68.2 |
| MS.gene07262.t1 | MTR_2g101880 | 34.513 | 113 | 70 | 3 | 34 | 144 | 67 | 177 | 1.74e-11 | 65.9 |
| MS.gene07262.t1 | MTR_2g093680 | 32.075 | 106 | 69 | 3 | 18 | 121 | 27 | 131 | 2.29e-11 | 61.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene07262.t1 | AT2G47470 | 78.788 | 330 | 70 | 0 | 34 | 363 | 28 | 357 | 0.0 | 547 |
| MS.gene07262.t1 | AT2G47470 | 73.939 | 330 | 60 | 1 | 34 | 363 | 28 | 331 | 7.12e-178 | 497 |
| MS.gene07262.t1 | AT2G47470 | 80.576 | 278 | 54 | 0 | 34 | 311 | 28 | 305 | 5.00e-168 | 472 |
| MS.gene07262.t1 | AT2G47470 | 81.590 | 239 | 44 | 0 | 34 | 272 | 28 | 266 | 6.80e-147 | 416 |
| MS.gene07262.t1 | AT1G04980 | 34.364 | 291 | 151 | 7 | 27 | 297 | 30 | 300 | 2.93e-42 | 153 |
| MS.gene07262.t1 | AT2G32920 | 33.681 | 288 | 154 | 7 | 27 | 297 | 28 | 295 | 1.42e-41 | 151 |
| MS.gene07262.t1 | AT5G60640 | 34.884 | 172 | 92 | 4 | 30 | 200 | 104 | 256 | 8.89e-23 | 100 |
| MS.gene07262.t1 | AT5G60640 | 46.591 | 88 | 45 | 1 | 149 | 236 | 379 | 464 | 1.04e-19 | 90.9 |
| MS.gene07262.t1 | AT5G60640 | 34.028 | 144 | 86 | 4 | 29 | 167 | 377 | 516 | 1.85e-14 | 75.1 |
| MS.gene07262.t1 | AT5G60640 | 34.884 | 172 | 92 | 4 | 30 | 200 | 104 | 256 | 1.04e-22 | 99.8 |
| MS.gene07262.t1 | AT5G60640 | 34.921 | 189 | 104 | 8 | 62 | 236 | 345 | 528 | 7.33e-22 | 97.4 |
| MS.gene07262.t1 | AT5G60640 | 34.884 | 172 | 92 | 4 | 30 | 200 | 104 | 256 | 1.10e-22 | 99.8 |
| MS.gene07262.t1 | AT5G60640 | 34.375 | 192 | 107 | 8 | 59 | 236 | 342 | 528 | 8.35e-22 | 97.4 |
| MS.gene07262.t1 | AT1G21750 | 47.826 | 92 | 45 | 2 | 168 | 256 | 50 | 141 | 7.80e-21 | 94.0 |
| MS.gene07262.t1 | AT1G21750 | 34.752 | 141 | 77 | 4 | 12 | 137 | 1 | 141 | 1.08e-20 | 93.6 |
| MS.gene07262.t1 | AT1G21750 | 41.748 | 103 | 59 | 1 | 149 | 251 | 376 | 477 | 2.00e-18 | 87.0 |
| MS.gene07262.t1 | AT1G21750 | 38.739 | 111 | 57 | 2 | 22 | 132 | 378 | 477 | 4.77e-15 | 76.6 |
| MS.gene07262.t1 | AT1G21750 | 41.284 | 109 | 63 | 1 | 149 | 257 | 376 | 483 | 7.93e-21 | 94.0 |
| MS.gene07262.t1 | AT1G21750 | 47.826 | 92 | 45 | 2 | 168 | 256 | 50 | 141 | 9.93e-21 | 93.6 |
| MS.gene07262.t1 | AT1G21750 | 34.752 | 141 | 77 | 4 | 12 | 137 | 1 | 141 | 1.24e-20 | 93.6 |
| MS.gene07262.t1 | AT1G21750 | 37.607 | 117 | 62 | 2 | 22 | 138 | 378 | 483 | 2.05e-15 | 77.8 |
| MS.gene07262.t1 | AT3G54960 | 34.043 | 188 | 111 | 6 | 58 | 234 | 337 | 522 | 9.80e-21 | 94.0 |
| MS.gene07262.t1 | AT3G54960 | 34.637 | 179 | 97 | 5 | 23 | 200 | 93 | 252 | 1.73e-18 | 87.4 |
| MS.gene07262.t1 | AT3G54960 | 34.028 | 144 | 89 | 4 | 30 | 169 | 438 | 579 | 1.89e-14 | 75.1 |
| MS.gene07262.t1 | AT3G54960 | 31.429 | 175 | 103 | 6 | 149 | 315 | 101 | 266 | 2.59e-14 | 74.7 |
| MS.gene07262.t1 | AT1G77510 | 37.190 | 121 | 75 | 1 | 149 | 269 | 374 | 493 | 2.21e-20 | 92.8 |
| MS.gene07262.t1 | AT1G77510 | 35.714 | 126 | 77 | 3 | 31 | 152 | 31 | 156 | 1.26e-18 | 87.4 |
| MS.gene07262.t1 | AT1G77510 | 35.338 | 133 | 76 | 4 | 149 | 272 | 31 | 162 | 1.70e-18 | 87.0 |
| MS.gene07262.t1 | AT1G77510 | 38.739 | 111 | 57 | 2 | 22 | 132 | 376 | 475 | 1.52e-15 | 78.2 |
| MS.gene07262.t1 | AT3G54960 | 34.637 | 179 | 97 | 5 | 23 | 200 | 93 | 252 | 1.13e-18 | 87.8 |
| MS.gene07262.t1 | AT3G54960 | 32.911 | 158 | 95 | 5 | 61 | 207 | 340 | 497 | 4.84e-15 | 76.6 |
| MS.gene07262.t1 | AT3G54960 | 31.429 | 175 | 103 | 6 | 149 | 315 | 101 | 266 | 1.76e-14 | 75.1 |
| MS.gene07262.t1 | AT1G07960 | 37.383 | 107 | 65 | 2 | 30 | 135 | 26 | 131 | 6.79e-17 | 77.4 |
| MS.gene07262.t1 | AT1G07960 | 28.571 | 126 | 88 | 2 | 140 | 265 | 18 | 141 | 3.84e-16 | 75.1 |
| MS.gene07262.t1 | AT1G07960 | 37.383 | 107 | 65 | 2 | 30 | 135 | 26 | 131 | 6.79e-17 | 77.4 |
| MS.gene07262.t1 | AT1G07960 | 28.571 | 126 | 88 | 2 | 140 | 265 | 18 | 141 | 3.84e-16 | 75.1 |
| MS.gene07262.t1 | AT1G07960 | 37.383 | 107 | 65 | 2 | 30 | 135 | 26 | 131 | 6.79e-17 | 77.4 |
| MS.gene07262.t1 | AT1G07960 | 28.571 | 126 | 88 | 2 | 140 | 265 | 18 | 141 | 3.84e-16 | 75.1 |
| MS.gene07262.t1 | AT1G07960 | 37.383 | 107 | 65 | 2 | 30 | 135 | 26 | 131 | 6.79e-17 | 77.4 |
| MS.gene07262.t1 | AT1G07960 | 28.571 | 126 | 88 | 2 | 140 | 265 | 18 | 141 | 3.84e-16 | 75.1 |
| MS.gene07262.t1 | AT1G35620 | 31.667 | 120 | 79 | 2 | 31 | 149 | 34 | 151 | 2.49e-15 | 77.4 |
| MS.gene07262.t1 | AT1G35620 | 36.496 | 137 | 70 | 6 | 149 | 283 | 34 | 155 | 3.91e-14 | 73.6 |
| MS.gene07262.t1 | AT4G27080 | 34.454 | 119 | 64 | 2 | 28 | 132 | 140 | 258 | 1.33e-13 | 72.4 |
| MS.gene07262.t1 | AT4G27080 | 34.454 | 119 | 64 | 2 | 28 | 132 | 192 | 310 | 1.57e-13 | 72.0 |
| MS.gene07262.t1 | AT2G01270 | 33.577 | 137 | 70 | 5 | 24 | 139 | 30 | 166 | 5.99e-13 | 70.1 |
| MS.gene07262.t1 | AT1G43560 | 32.979 | 94 | 60 | 2 | 155 | 248 | 66 | 156 | 1.11e-12 | 65.9 |
| MS.gene07262.t1 | AT1G76760 | 33.766 | 77 | 49 | 1 | 155 | 231 | 71 | 145 | 1.01e-11 | 63.5 |
| MS.gene07262.t1 | AT1G52260 | 34.021 | 97 | 61 | 2 | 161 | 256 | 90 | 184 | 2.15e-11 | 65.5 |
| MS.gene07262.t1 | AT3G20560 | 30.769 | 169 | 87 | 7 | 29 | 181 | 141 | 295 | 2.16e-11 | 65.5 |
| MS.gene07262.t1 | AT1G15020 | 31.884 | 138 | 71 | 6 | 24 | 139 | 36 | 172 | 7.40e-11 | 63.9 |
| MS.gene07262.t1 | AT1G15020 | 31.884 | 138 | 71 | 6 | 24 | 139 | 36 | 172 | 7.40e-11 | 63.9 |
| MS.gene07262.t1 | AT1G15020 | 31.884 | 138 | 71 | 6 | 24 | 139 | 36 | 172 | 7.47e-11 | 63.9 |
Find 71 sgRNAs with CRISPR-Local
Find 253 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACAACTTCGTTGAAGGTTTC+AGG | 0.182439 | 1.3:-61932065 | None:intergenic |
| CGATGTAGTGATTGCAAATT+TGG | 0.193790 | 1.3:+61932484 | MS.gene07262:CDS |
| AGTACTTCTTAGAAACTTTC+AGG | 0.203871 | 1.3:-61933477 | None:intergenic |
| CACCGGCTTTGTTGCCCTTT+GGG | 0.256628 | 1.3:-61932876 | None:intergenic |
| CTCAACTTCCTCTTCAATTC+GGG | 0.267301 | 1.3:-61933246 | None:intergenic |
| CAGAAAGAAGAAGATGAAAA+TGG | 0.277955 | 1.3:+61929509 | None:intergenic |
| ATTTGGATGCCGACAAATAT+AGG | 0.282633 | 1.3:+61932501 | MS.gene07262:CDS |
| CTTGGCAATCAAAACAGATT+TGG | 0.298806 | 1.3:-61930839 | None:intergenic |
| TCACCGGCTTTGTTGCCCTT+TGG | 0.302925 | 1.3:-61932877 | None:intergenic |
| AAGAGTGTGTGCAGCAAATA+TGG | 0.310178 | 1.3:+61931387 | MS.gene07262:CDS |
| TCTCAACTTCCTCTTCAATT+CGG | 0.333016 | 1.3:-61933247 | None:intergenic |
| AAACTCAACCAAGACATCTT+TGG | 0.333568 | 1.3:-61932099 | None:intergenic |
| TGCAGCAAATATGGCGTCTC+TGG | 0.357109 | 1.3:+61931396 | MS.gene07262:CDS |
| GTCAATTCGTCGGCCTTAGC+AGG | 0.363199 | 1.3:-61933818 | None:intergenic |
| AACAAAGCCGGTGAAGATTA+TGG | 0.369872 | 1.3:+61932886 | MS.gene07262:CDS |
| TTGGGTTCTAGAGATCCTTT+TGG | 0.375047 | 1.3:-61931441 | None:intergenic |
| TTTGGATGCCGACAAATATA+GGG | 0.392085 | 1.3:+61932502 | MS.gene07262:CDS |
| AAGGAAGTTGGTCAAGATAA+AGG | 0.392677 | 1.3:+61929642 | MS.gene07262:CDS |
| AAGAGACTTGGATGACTTTG+TGG | 0.405410 | 1.3:+61932915 | MS.gene07262:CDS |
| AGCTCAAGGGTTCTGCTTCT+AGG | 0.408451 | 1.3:+61933270 | MS.gene07262:CDS |
| AGTGGAAGACTTGGACGAAT+TGG | 0.413484 | 1.3:+61933175 | MS.gene07262:CDS |
| AGCCAGGTCCCTATATTTGT+CGG | 0.426037 | 1.3:-61932510 | None:intergenic |
| ATCCAAGACAACTTCGTTGA+AGG | 0.433274 | 1.3:-61932072 | None:intergenic |
| GAAAATTTCGAGAAGGAAGT+TGG | 0.442730 | 1.3:+61929630 | MS.gene07262:CDS |
| AACCTTCAACGAAGTTGTCT+TGG | 0.447834 | 1.3:+61932070 | MS.gene07262:CDS |
| GAAAATTCCTGTAGGTTTGA+AGG | 0.449227 | 1.3:+61931581 | MS.gene07262:intron |
| TCTAAGAAGTACTTGGAGAA+AGG | 0.455359 | 1.3:+61933487 | MS.gene07262:CDS |
| TTATGGAGGTGGAAGAGACT+TGG | 0.456654 | 1.3:+61932903 | MS.gene07262:CDS |
| GAAAGTTTCTAAGAAGTACT+TGG | 0.456740 | 1.3:+61933480 | MS.gene07262:CDS |
| TTCCCAAAGGGCAACAAAGC+CGG | 0.473546 | 1.3:+61932874 | MS.gene07262:CDS |
| AAATGGAGATGCATCAGATC+TGG | 0.477555 | 1.3:+61929526 | MS.gene07262:CDS |
| CCTAGAACGACTACTTGAAA+AGG | 0.487467 | 1.3:+61933540 | MS.gene07262:CDS |
| TTCTGTATAGGCTGGTATAG+TGG | 0.489871 | 1.3:+61933157 | MS.gene07262:intron |
| TTTCTTGAGGGTCAATTCGT+CGG | 0.493083 | 1.3:-61933828 | None:intergenic |
| TTGGAAACCACTGAATCGTT+GGG | 0.493402 | 1.3:-61931422 | None:intergenic |
| TTTGGAAACCACTGAATCGT+TGG | 0.494227 | 1.3:-61931423 | None:intergenic |
| GCCCTTTGGGAAGAACTTCA+AGG | 0.495998 | 1.3:-61932863 | None:intergenic |
| ACCTTGAAGTTCTTCCCAAA+GGG | 0.499568 | 1.3:+61932862 | MS.gene07262:CDS |
| GCCGGTGAAGATTATGGAGG+TGG | 0.503383 | 1.3:+61932892 | MS.gene07262:CDS |
| TTATGCAGGTATGATGTAAG+TGG | 0.507495 | 1.3:+61932832 | MS.gene07262:intron |
| ACGATTCAGTGGTTTCCAAA+AGG | 0.517733 | 1.3:+61931426 | MS.gene07262:CDS |
| CTCTTCAATTCGGGCAAACA+CGG | 0.519231 | 1.3:-61933237 | None:intergenic |
| TACCTTGAAGTTCTTCCCAA+AGG | 0.520489 | 1.3:+61932861 | MS.gene07262:CDS |
| TCCACCTCCATAATCTTCAC+CGG | 0.524594 | 1.3:-61932893 | None:intergenic |
| GGATGAAACCAAAGATGTCT+TGG | 0.528319 | 1.3:+61932091 | MS.gene07262:CDS |
| GGCTGGTATAGTGGAAGACT+TGG | 0.534298 | 1.3:+61933166 | MS.gene07262:intron |
| TCGTTGAGTTCTACGCCCCT+TGG | 0.544107 | 1.3:+61929670 | MS.gene07262:CDS |
| TGCTGATGACAAAGAGAAGA+AGG | 0.546178 | 1.3:+61933214 | MS.gene07262:CDS |
| AAAATTCCTGTAGGTTTGAA+GGG | 0.547840 | 1.3:+61931582 | MS.gene07262:intron |
| GCAGTCTATCAGCCCTGCTA+AGG | 0.553095 | 1.3:+61933805 | MS.gene07262:intron |
| GGAACAAGTCGAGATGCAAA+AGG | 0.557736 | 1.3:+61932958 | MS.gene07262:CDS |
| CGTGTTTGCCCGAATTGAAG+AGG | 0.560187 | 1.3:+61933238 | MS.gene07262:CDS |
| AGACTTGGACGAATTGGTAA+AGG | 0.570577 | 1.3:+61933181 | MS.gene07262:CDS |
| TCAATTCGTCGGCCTTAGCA+GGG | 0.573157 | 1.3:-61933817 | None:intergenic |
| TACAGCTCCATCTCATGTAG+TGG | 0.576987 | 1.3:+61932034 | MS.gene07262:CDS |
| GCAGCAAATATGGCGTCTCT+GGG | 0.581952 | 1.3:+61931397 | MS.gene07262:CDS |
| CTGGGTACCCAACGATTCAG+TGG | 0.589603 | 1.3:+61931415 | MS.gene07262:CDS |
| GCTGAGTTTGTAAACACAGA+AGG | 0.589800 | 1.3:+61931626 | MS.gene07262:CDS |
| AGAGGAAGTTGAGAAGCTCA+AGG | 0.591148 | 1.3:+61933256 | MS.gene07262:CDS |
| GTTAGCACCACTACATGAGA+TGG | 0.595533 | 1.3:-61932041 | None:intergenic |
| GACTGAAGAAAATTTCGAGA+AGG | 0.599089 | 1.3:+61929623 | MS.gene07262:CDS |
| AAAAGGACAGCTTACTTCTG+AGG | 0.602957 | 1.3:+61932975 | MS.gene07262:CDS |
| GAGGAAGTTGAGAAGCTCAA+GGG | 0.606083 | 1.3:+61933257 | MS.gene07262:CDS |
| TGCCGACAAATATAGGGACC+TGG | 0.607166 | 1.3:+61932508 | MS.gene07262:CDS |
| AGCTGTAGCAATCTTCACAT+TGG | 0.611470 | 1.3:-61932018 | None:intergenic |
| GCTCCGGAATATGAAAAGCT+CGG | 0.615790 | 1.3:+61930799 | MS.gene07262:CDS |
| TTTGGGAAGAACTTCAAGGT+AGG | 0.618623 | 1.3:-61932859 | None:intergenic |
| GCAAGTGATTCTGCAGTGCG+TGG | 0.619080 | 1.3:-61931605 | None:intergenic |
| ATCAGTTTCAGCAGACGACG+TGG | 0.654164 | 1.3:+61929593 | MS.gene07262:CDS |
| GAGTTTGTAAACACAGAAGG+AGG | 0.682221 | 1.3:+61931629 | MS.gene07262:CDS |
| AAAGCCGGTGAAGATTATGG+AGG | 0.748922 | 1.3:+61932889 | MS.gene07262:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAAAATTAATGATTAAAAAA+TGG | - | chr1.3:61932168-61932187 | None:intergenic | 10.0% |
| !! | TAATTATCAAAACTAAATTT+CGG | - | chr1.3:61929866-61929885 | None:intergenic | 10.0% |
| !!! | TAGTTTTGATAATTAAATTA+AGG | + | chr1.3:61929871-61929890 | MS.gene07262:intron | 10.0% |
| !! | AGAACTTTAATTAATAATTC+AGG | + | chr1.3:61930514-61930533 | MS.gene07262:intron | 15.0% |
| !!! | AATATCTTTTAATAGAATGA+AGG | + | chr1.3:61930443-61930462 | MS.gene07262:intron | 15.0% |
| !!! | ATATCTTTTAATAGAATGAA+GGG | + | chr1.3:61930444-61930463 | MS.gene07262:intron | 15.0% |
| !!! | TTATACTCTTTTAATAGATA+AGG | + | chr1.3:61930337-61930356 | MS.gene07262:intron | 15.0% |
| !!! | TTTTCTTAATCTATAACAAA+TGG | - | chr1.3:61931016-61931035 | None:intergenic | 15.0% |
| !!! | TTTTTCATATAAAAAATTGG+CGG | + | chr1.3:61933052-61933071 | MS.gene07262:intron | 15.0% |
| !! | AATGGCAATATGATAATTAT+TGG | - | chr1.3:61932150-61932169 | None:intergenic | 20.0% |
| !! | ATGAATTGTTGTAAATGATA+CGG | + | chr1.3:61929776-61929795 | MS.gene07262:intron | 20.0% |
| !! | CCAACTTTAAATTGATAAAA+AGG | - | chr1.3:61932369-61932388 | None:intergenic | 20.0% |
| !! | GTTAATCTAATACTTGATTT+CGG | + | chr1.3:61931559-61931578 | MS.gene07262:intron | 20.0% |
| !! | TAAACTCTACTTATATAACA+TGG | - | chr1.3:61930046-61930065 | None:intergenic | 20.0% |
| !! | TATTAAATCATCAATGAGAA+CGG | - | chr1.3:61931304-61931323 | None:intergenic | 20.0% |
| !! | TCTACATTACAAATTACAAA+GGG | - | chr1.3:61930593-61930612 | None:intergenic | 20.0% |
| !! | TCTCTAATTATTTGATTGAA+GGG | - | chr1.3:61929951-61929970 | None:intergenic | 20.0% |
| !! | TTCACTTTATCTGTAATAAT+AGG | + | chr1.3:61930755-61930774 | MS.gene07262:intron | 20.0% |
| !! | TTCTCTAATTATTTGATTGA+AGG | - | chr1.3:61929952-61929971 | None:intergenic | 20.0% |
| !! | TTTAATTATTTGGTCGTTAA+AGG | + | chr1.3:61933706-61933725 | MS.gene07262:intron | 20.0% |
| !!! | AACTTTTTCATAAATCTGAA+GGG | - | chr1.3:61932441-61932460 | None:intergenic | 20.0% |
| !!! | ATTGCAAAAAAGTTATTTCA+AGG | - | chr1.3:61933661-61933680 | None:intergenic | 20.0% |
| !!! | ATTTCTCTGTATTTTTAGTA+AGG | + | chr1.3:61931044-61931063 | MS.gene07262:intron | 20.0% |
| !!! | CCTTTTTATCAATTTAAAGT+TGG | + | chr1.3:61932366-61932385 | MS.gene07262:intron | 20.0% |
| !!! | CTAACTTATTAATTTGCTAT+AGG | + | chr1.3:61931347-61931366 | MS.gene07262:intron | 20.0% |
| !!! | TAGTTTTATCATCTGATTTA+CGG | + | chr1.3:61929750-61929769 | MS.gene07262:intron | 20.0% |
| !!! | TATCATTTTCTAAAAAGTCA+AGG | - | chr1.3:61931479-61931498 | None:intergenic | 20.0% |
| !!! | TATTTTAATGCAAAACAAAG+AGG | - | chr1.3:61932198-61932217 | None:intergenic | 20.0% |
| !!! | TTGATATGATTTTATATCTC+AGG | + | chr1.3:61931499-61931518 | MS.gene07262:intron | 20.0% |
| !!! | TTGTAAAAATTTGATAATCG+TGG | + | chr1.3:61933756-61933775 | MS.gene07262:intron | 20.0% |
| !!! | TTTTTGAAGTACTTTAATGT+AGG | + | chr1.3:61931800-61931819 | MS.gene07262:intron | 20.0% |
| !!! | TTTTTTTTCTCCATTAGATA+CGG | + | chr1.3:61933445-61933464 | MS.gene07262:intron | 20.0% |
| ! | AAAAAATAGATGTGAAATGC+AGG | - | chr1.3:61931539-61931558 | None:intergenic | 25.0% |
| ! | ACGCATAAGTTTATTTACTA+TGG | - | chr1.3:61930277-61930296 | None:intergenic | 25.0% |
| ! | ATAGATATTACAGTAACAGA+TGG | - | chr1.3:61931675-61931694 | None:intergenic | 25.0% |
| ! | ATCATTTCAGAATATTGTCA+TGG | + | chr1.3:61933305-61933324 | MS.gene07262:intron | 25.0% |
| ! | ATTGTAAATTAGTAATGTCC+TGG | + | chr1.3:61932217-61932236 | MS.gene07262:intron | 25.0% |
| ! | CATCAAATCAAAAGCTAAAA+CGG | - | chr1.3:61929804-61929823 | None:intergenic | 25.0% |
| ! | CTCTACATTACAAATTACAA+AGG | - | chr1.3:61930594-61930613 | None:intergenic | 25.0% |
| ! | GTTAAACTTGAATTTCTCTT+TGG | + | chr1.3:61933633-61933652 | MS.gene07262:intron | 25.0% |
| ! | GTTAAGAATATAAATTTCCC+AGG | - | chr1.3:61931236-61931255 | None:intergenic | 25.0% |
| ! | TATTACAATGATAAGACAGT+AGG | + | chr1.3:61929989-61930008 | MS.gene07262:intron | 25.0% |
| ! | TGAAAGAGTTATGTTTAACT+TGG | + | chr1.3:61932402-61932421 | MS.gene07262:intron | 25.0% |
| ! | TTGCAATTGTACTATTGTAA+TGG | + | chr1.3:61931963-61931982 | MS.gene07262:intron | 25.0% |
| ! | TTTATCTGTAATAATAGGTG+TGG | + | chr1.3:61930760-61930779 | MS.gene07262:intron | 25.0% |
| ! | TTTCAGTTTAATAATCTCCT+CGG | - | chr1.3:61930974-61930993 | None:intergenic | 25.0% |
| !! | AAAAAAGTATATGATGCTAC+AGG | - | chr1.3:61931784-61931803 | None:intergenic | 25.0% |
| !! | AATTATTAACAATCTAGCTC+AGG | + | chr1.3:61929917-61929936 | MS.gene07262:intron | 25.0% |
| !! | AGACAATATGTTTTTCTTGA+GGG | - | chr1.3:61933843-61933862 | None:intergenic | 25.0% |
| !! | TAGACAATATGTTTTTCTTG+AGG | - | chr1.3:61933844-61933863 | None:intergenic | 25.0% |
| !!! | AACCAACTCTTTTTAAGATT+AGG | - | chr1.3:61932555-61932574 | None:intergenic | 25.0% |
| !!! | ACATGGTTATTTTGTGTTTA+CGG | - | chr1.3:61930029-61930048 | None:intergenic | 25.0% |
| !!! | ACGTAATTTTAAAGTAAAGG+CGG | + | chr1.3:61931194-61931213 | MS.gene07262:intron | 25.0% |
| !!! | ACTTATTAATTTGCTATAGG+TGG | + | chr1.3:61931350-61931369 | MS.gene07262:intron | 25.0% |
| !!! | ACTTTTTCATAAATCTGAAG+GGG | - | chr1.3:61932440-61932459 | None:intergenic | 25.0% |
| !!! | AGTAACAGATGGTTTTAAAA+CGG | - | chr1.3:61931664-61931683 | None:intergenic | 25.0% |
| !!! | CAACTTTTTCATAAATCTGA+AGG | - | chr1.3:61932442-61932461 | None:intergenic | 25.0% |
| !!! | CACACGTAATTTTAAAGTAA+AGG | + | chr1.3:61931191-61931210 | MS.gene07262:intron | 25.0% |
| !!! | GATTTTTTTAGTTTCTGTGA+TGG | + | chr1.3:61931881-61931900 | MS.gene07262:intron | 25.0% |
| !!! | TGAACTTTTGTTATTTTGCA+AGG | + | chr1.3:61932293-61932312 | MS.gene07262:intron | 25.0% |
| !!! | TTTTTTTCTCCATTAGATAC+GGG | + | chr1.3:61933446-61933465 | MS.gene07262:intron | 25.0% |
| AAAATACACAGAAGAGAGAA+AGG | - | chr1.3:61931941-61931960 | None:intergenic | 30.0% | |
| AAAATTCCTGTAGGTTTGAA+GGG | + | chr1.3:61931582-61931601 | MS.gene07262:intron | 30.0% | |
| AAATACACAGAAGAGAGAAA+GGG | - | chr1.3:61931940-61931959 | None:intergenic | 30.0% | |
| AAGATCGAGAAAATTACCAA+GGG | - | chr1.3:61929689-61929708 | None:intergenic | 30.0% | |
| AAGGAGATTAAGAATTGAAG+TGG | + | chr1.3:61933725-61933744 | MS.gene07262:intron | 30.0% | |
| AATGTAGGTACCAAAACAAA+TGG | + | chr1.3:61932673-61932692 | MS.gene07262:intron | 30.0% | |
| AGAATATAAATTTCCCAGGA+TGG | - | chr1.3:61931232-61931251 | None:intergenic | 30.0% | |
| AGTACTTCTTAGAAACTTTC+AGG | - | chr1.3:61933480-61933499 | None:intergenic | 30.0% | |
| ATGTAGGTACCAAAACAAAT+GGG | + | chr1.3:61932674-61932693 | MS.gene07262:intron | 30.0% | |
| ATTTGCATGCGTATACTTTA+TGG | + | chr1.3:61933365-61933384 | MS.gene07262:intron | 30.0% | |
| CAAATTAAACAGTTCTCAAG+GGG | - | chr1.3:61933350-61933369 | None:intergenic | 30.0% | |
| CAGATAAAATTTACTGAGCT+TGG | - | chr1.3:61930889-61930908 | None:intergenic | 30.0% | |
| CCAAAACACTATATCCATTA+AGG | + | chr1.3:61930475-61930494 | MS.gene07262:intron | 30.0% | |
| GCAAATTAAACAGTTCTCAA+GGG | - | chr1.3:61933351-61933370 | None:intergenic | 30.0% | |
| GTAGCAAGAAGAAATAATGT+AGG | + | chr1.3:61932658-61932677 | MS.gene07262:intron | 30.0% | |
| TAAAAAGTGAAGTCCAATAG+AGG | + | chr1.3:61932597-61932616 | MS.gene07262:intron | 30.0% | |
| TGAAACTTTGACATTTACCA+GGG | + | chr1.3:61930989-61931008 | MS.gene07262:intron | 30.0% | |
| TGCAAATTAAACAGTTCTCA+AGG | - | chr1.3:61933352-61933371 | None:intergenic | 30.0% | |
| TGCCTAATCTTAAAAAGAGT+TGG | + | chr1.3:61932550-61932569 | MS.gene07262:intron | 30.0% | |
| TTCCTACTCAAAAACCTTAA+TGG | - | chr1.3:61930492-61930511 | None:intergenic | 30.0% | |
| TTTCACAAACATTCCATGAT+TGG | - | chr1.3:61932249-61932268 | None:intergenic | 30.0% | |
| ! | AGCATTTTTCCCATTTGTTT+TGG | - | chr1.3:61932686-61932705 | None:intergenic | 30.0% |
| ! | AGTTGCTGCAGTTTTTAAAT+CGG | + | chr1.3:61932457-61932476 | MS.gene07262:CDS | 30.0% |
| ! | ATCTAAAACTCTAGTATCTC+AGG | - | chr1.3:61931835-61931854 | None:intergenic | 30.0% |
| ! | CTGGTTTGCATAAAATAAAC+TGG | + | chr1.3:61930248-61930267 | MS.gene07262:intron | 30.0% |
| ! | GAAGTACTTTAATGTAGGAT+TGG | + | chr1.3:61931805-61931824 | MS.gene07262:intron | 30.0% |
| ! | GAGAAATTCAAGTTTAACCA+TGG | - | chr1.3:61933631-61933650 | None:intergenic | 30.0% |
| ! | GCTTTTATCAATGAGAAATC+TGG | + | chr1.3:61932937-61932956 | MS.gene07262:CDS | 30.0% |
| ! | TCATAGGTCATTTGGTAATT+TGG | + | chr1.3:61930163-61930182 | MS.gene07262:intron | 30.0% |
| ! | TCATCTCGACTATTTGATTT+AGG | + | chr1.3:61930391-61930410 | MS.gene07262:intron | 30.0% |
| ! | TTCTGCAATAACTTTTATGC+AGG | + | chr1.3:61932818-61932837 | MS.gene07262:intron | 30.0% |
| ! | TTGCTTTAAGCAACATAACA+GGG | - | chr1.3:61933398-61933417 | None:intergenic | 30.0% |
| ! | TTTGCTTTAAGCAACATAAC+AGG | - | chr1.3:61933399-61933418 | None:intergenic | 30.0% |
| ! | TTTTCATTCACTAAGTGATG+TGG | - | chr1.3:61930131-61930150 | None:intergenic | 30.0% |
| !! | CCTTAATGGATATAGTGTTT+TGG | - | chr1.3:61930478-61930497 | None:intergenic | 30.0% |
| !! | GAAAGTTTCTAAGAAGTACT+TGG | + | chr1.3:61933480-61933499 | MS.gene07262:CDS | 30.0% |
| !! | TAATGGATTTCCTAAACAGA+GGG | + | chr1.3:61931980-61931999 | MS.gene07262:intron | 30.0% |
| !!! | ATCCATTAAGGTTTTTGAGT+AGG | + | chr1.3:61930487-61930506 | MS.gene07262:intron | 30.0% |
| !!! | TAATTTTAAAGTAAAGGCGG+AGG | + | chr1.3:61931197-61931216 | MS.gene07262:intron | 30.0% |
| !!! | TTTTGTTATTTTGCAAGGTG+TGG | + | chr1.3:61932298-61932317 | MS.gene07262:intron | 30.0% |
| AAAAACACATGCCTTGTCAT+AGG | + | chr1.3:61930147-61930166 | MS.gene07262:intron | 35.0% | |
| AAACTCAACCAAGACATCTT+TGG | - | chr1.3:61932102-61932121 | None:intergenic | 35.0% | |
| AAGTATATGATGCTACAGGA+TGG | - | chr1.3:61931780-61931799 | None:intergenic | 35.0% | |
| AATACACAGAAGAGAGAAAG+GGG | - | chr1.3:61931939-61931958 | None:intergenic | 35.0% | |
| AATAGAGGTCAGATTGTTTG+GGG | + | chr1.3:61932612-61932631 | MS.gene07262:intron | 35.0% | |
| AATCTATAACAAATGGACCC+TGG | - | chr1.3:61931009-61931028 | None:intergenic | 35.0% | |
| ACATGTTTGTGTAACTTCCA+AGG | + | chr1.3:61931718-61931737 | MS.gene07262:intron | 35.0% | |
| AGATCGAGAAAATTACCAAG+GGG | - | chr1.3:61929688-61929707 | None:intergenic | 35.0% | |
| AGTAAGTGTTATCTCTAGCT+TGG | + | chr1.3:61930649-61930668 | MS.gene07262:intron | 35.0% | |
| AGTATATGATGCTACAGGAT+GGG | - | chr1.3:61931779-61931798 | None:intergenic | 35.0% | |
| ATATAAAAAATTGGCGGCAG+TGG | + | chr1.3:61933058-61933077 | MS.gene07262:intron | 35.0% | |
| ATCAAGTTCAAGCACAAAGA+TGG | - | chr1.3:61931269-61931288 | None:intergenic | 35.0% | |
| ATTTGGATGCCGACAAATAT+AGG | + | chr1.3:61932501-61932520 | MS.gene07262:CDS | 35.0% | |
| CAATAGAGGTCAGATTGTTT+GGG | + | chr1.3:61932611-61932630 | MS.gene07262:intron | 35.0% | |
| CGATGTAGTGATTGCAAATT+TGG | + | chr1.3:61932484-61932503 | MS.gene07262:CDS | 35.0% | |
| CTGAAACTTTGACATTTACC+AGG | + | chr1.3:61930988-61931007 | MS.gene07262:intron | 35.0% | |
| CTGCAATGATATCAACTTAC+AGG | - | chr1.3:61932343-61932362 | None:intergenic | 35.0% | |
| CTTGGCAATCAAAACAGATT+TGG | - | chr1.3:61930842-61930861 | None:intergenic | 35.0% | |
| GAAAATTCCTGTAGGTTTGA+AGG | + | chr1.3:61931581-61931600 | MS.gene07262:intron | 35.0% | |
| GAAAATTTCGAGAAGGAAGT+TGG | + | chr1.3:61929630-61929649 | MS.gene07262:CDS | 35.0% | |
| GAAGATCGAGAAAATTACCA+AGG | - | chr1.3:61929690-61929709 | None:intergenic | 35.0% | |
| GACTGAAGAAAATTTCGAGA+AGG | + | chr1.3:61929623-61929642 | MS.gene07262:CDS | 35.0% | |
| GCATGAAATGATAAGTTCCA+TGG | + | chr1.3:61933611-61933630 | MS.gene07262:intron | 35.0% | |
| GTAAATCTTCCCGTATCTAA+TGG | - | chr1.3:61933458-61933477 | None:intergenic | 35.0% | |
| GTCTTTGTGATATTTCCGAA+GGG | - | chr1.3:61931757-61931776 | None:intergenic | 35.0% | |
| TCTCAACTTCCTCTTCAATT+CGG | - | chr1.3:61933250-61933269 | None:intergenic | 35.0% | |
| TGATTTCGGAAAATTCCTGT+AGG | + | chr1.3:61931573-61931592 | MS.gene07262:intron | 35.0% | |
| TGCATCAAGTGAAACTTTCA+AGG | - | chr1.3:61933594-61933613 | None:intergenic | 35.0% | |
| TGTTGAGCATAACTTTAGCA+TGG | + | chr1.3:61931904-61931923 | MS.gene07262:intron | 35.0% | |
| TTACCAAATGACCTATGACA+AGG | - | chr1.3:61930161-61930180 | None:intergenic | 35.0% | |
| TTATGCAGGTATGATGTAAG+TGG | + | chr1.3:61932832-61932851 | MS.gene07262:intron | 35.0% | |
| TTTGGATGCCGACAAATATA+GGG | + | chr1.3:61932502-61932521 | MS.gene07262:CDS | 35.0% | |
| ! | AAGGAAGTTGGTCAAGATAA+AGG | + | chr1.3:61929642-61929661 | MS.gene07262:CDS | 35.0% |
| ! | AATTTACTGAGCTTGGTAAC+AGG | - | chr1.3:61930882-61930901 | None:intergenic | 35.0% |
| ! | CGCACTTGATATTTCTGTAT+AGG | + | chr1.3:61933145-61933164 | MS.gene07262:intron | 35.0% |
| ! | CTTGATATTTCTGTATAGGC+TGG | + | chr1.3:61933149-61933168 | MS.gene07262:intron | 35.0% |
| ! | TTACCGAGCTTTTCATATTC+CGG | - | chr1.3:61930805-61930824 | None:intergenic | 35.0% |
| ! | TTTGGTAATTTGGCAACACA+TGG | + | chr1.3:61930173-61930192 | MS.gene07262:intron | 35.0% |
| !! | CTAAAACTTACTTTTCAGCC+AGG | - | chr1.3:61932529-61932548 | None:intergenic | 35.0% |
| !! | GATTCTCTTGGGTTGAATAT+AGG | + | chr1.3:61930305-61930324 | MS.gene07262:intron | 35.0% |
| !! | GTAATGGATTTCCTAAACAG+AGG | + | chr1.3:61931979-61931998 | MS.gene07262:intron | 35.0% |
| !! | TCTAAGAAGTACTTGGAGAA+AGG | + | chr1.3:61933487-61933506 | MS.gene07262:CDS | 35.0% |
| !! | TGCGCAGATTTTGATGATTT+AGG | - | chr1.3:61931858-61931877 | None:intergenic | 35.0% |
| !! | TTTTTCTGATTCGCTTCGAT+CGG | + | chr1.3:61929713-61929732 | MS.gene07262:intron | 35.0% |
| !!! | CAAATCTGTTTTGATTGCCA+AGG | + | chr1.3:61930840-61930859 | MS.gene07262:CDS | 35.0% |
| !!! | TCAAGGTCTTCTCACTTTTT+GGG | - | chr1.3:61931462-61931481 | None:intergenic | 35.0% |
| AAAAGGACAGCTTACTTCTG+AGG | + | chr1.3:61932975-61932994 | MS.gene07262:CDS | 40.0% | |
| AAATGGAGATGCATCAGATC+TGG | + | chr1.3:61929526-61929545 | MS.gene07262:CDS | 40.0% | |
| AACAAAGCCGGTGAAGATTA+TGG | + | chr1.3:61932886-61932905 | MS.gene07262:CDS | 40.0% | |
| AACCTTCAACGAAGTTGTCT+TGG | + | chr1.3:61932070-61932089 | MS.gene07262:CDS | 40.0% | |
| AAGAGACTTGGATGACTTTG+TGG | + | chr1.3:61932915-61932934 | MS.gene07262:CDS | 40.0% | |
| ACAACTTCGTTGAAGGTTTC+AGG | - | chr1.3:61932068-61932087 | None:intergenic | 40.0% | |
| ACCTTGAAGTTCTTCCCAAA+GGG | + | chr1.3:61932862-61932881 | MS.gene07262:CDS | 40.0% | |
| ACGATTCAGTGGTTTCCAAA+AGG | + | chr1.3:61931426-61931445 | MS.gene07262:CDS | 40.0% | |
| AGACTTGGACGAATTGGTAA+AGG | + | chr1.3:61933181-61933200 | MS.gene07262:CDS | 40.0% | |
| AGCTGTAGCAATCTTCACAT+TGG | - | chr1.3:61932021-61932040 | None:intergenic | 40.0% | |
| ATAAATACGACCATGTGCTC+TGG | + | chr1.3:61930229-61930248 | MS.gene07262:intron | 40.0% | |
| ATCATGCAGTTTGGTCTAGT+AGG | - | chr1.3:61932638-61932657 | None:intergenic | 40.0% | |
| ATCCAAGACAACTTCGTTGA+AGG | - | chr1.3:61932075-61932094 | None:intergenic | 40.0% | |
| ATGCCTTGTCATAGGTCATT+TGG | + | chr1.3:61930155-61930174 | MS.gene07262:intron | 40.0% | |
| CCAAACAATCTGACCTCTAT+TGG | - | chr1.3:61932613-61932632 | None:intergenic | 40.0% | |
| CCAATAGAGGTCAGATTGTT+TGG | + | chr1.3:61932610-61932629 | MS.gene07262:intron | 40.0% | |
| CCTAGAACGACTACTTGAAA+AGG | + | chr1.3:61933540-61933559 | MS.gene07262:CDS | 40.0% | |
| CGTCTCAATGTGATTCTCTT+GGG | + | chr1.3:61930294-61930313 | MS.gene07262:intron | 40.0% | |
| CTCAACTTCCTCTTCAATTC+GGG | - | chr1.3:61933249-61933268 | None:intergenic | 40.0% | |
| GAGTTTGTAAACACAGAAGG+AGG | + | chr1.3:61931629-61931648 | MS.gene07262:CDS | 40.0% | |
| GCTGAGTTTGTAAACACAGA+AGG | + | chr1.3:61931626-61931645 | MS.gene07262:CDS | 40.0% | |
| GGATGAAACCAAAGATGTCT+TGG | + | chr1.3:61932091-61932110 | MS.gene07262:CDS | 40.0% | |
| GGTCTTTGTGATATTTCCGA+AGG | - | chr1.3:61931758-61931777 | None:intergenic | 40.0% | |
| GTAAGTCAAACCCTCTGTTT+AGG | - | chr1.3:61931993-61932012 | None:intergenic | 40.0% | |
| GTTCTTATTGCGAAGCATGT+TGG | + | chr1.3:61930927-61930946 | MS.gene07262:intron | 40.0% | |
| TACCTTGAAGTTCTTCCCAA+AGG | + | chr1.3:61932861-61932880 | MS.gene07262:CDS | 40.0% | |
| TCTTGCTACATCATGCAGTT+TGG | - | chr1.3:61932647-61932666 | None:intergenic | 40.0% | |
| TGCTGATGACAAAGAGAAGA+AGG | + | chr1.3:61933214-61933233 | MS.gene07262:CDS | 40.0% | |
| TTCCATGATTGGATGAAACC+AGG | - | chr1.3:61932238-61932257 | None:intergenic | 40.0% | |
| TTCTGTATAGGCTGGTATAG+TGG | + | chr1.3:61933157-61933176 | MS.gene07262:intron | 40.0% | |
| TTGGAAACCACTGAATCGTT+GGG | - | chr1.3:61931425-61931444 | None:intergenic | 40.0% | |
| TTTATGCAAACCAGAGCACA+TGG | - | chr1.3:61930242-61930261 | None:intergenic | 40.0% | |
| TTTCTTGAGGGTCAATTCGT+CGG | - | chr1.3:61933831-61933850 | None:intergenic | 40.0% | |
| TTTGGAAACCACTGAATCGT+TGG | - | chr1.3:61931426-61931445 | None:intergenic | 40.0% | |
| TTTGGGAAGAACTTCAAGGT+AGG | - | chr1.3:61932862-61932881 | None:intergenic | 40.0% | |
| TTTGTGATATTTCCGAAGGG+TGG | - | chr1.3:61931754-61931773 | None:intergenic | 40.0% | |
| ! | AAACAGAGGGTTTGACTTAC+AGG | + | chr1.3:61931993-61932012 | MS.gene07262:intron | 40.0% |
| ! | AAGAGTGTGTGCAGCAAATA+TGG | + | chr1.3:61931387-61931406 | MS.gene07262:CDS | 40.0% |
| ! | TGCTGCAGTTTTTAAATCGG+AGG | + | chr1.3:61932460-61932479 | MS.gene07262:CDS | 40.0% |
| !! | GTCAAGGTCTTCTCACTTTT+TGG | - | chr1.3:61931463-61931482 | None:intergenic | 40.0% |
| !! | TGGTTGAGTTTTATGCACCA+TGG | + | chr1.3:61932111-61932130 | MS.gene07262:CDS | 40.0% |
| !!! | CCTTTTCAAGTAGTCGTTCT+AGG | - | chr1.3:61933543-61933562 | None:intergenic | 40.0% |
| !!! | TTGGGTTCTAGAGATCCTTT+TGG | - | chr1.3:61931444-61931463 | None:intergenic | 40.0% |
| AAAGCCGGTGAAGATTATGG+AGG | + | chr1.3:61932889-61932908 | MS.gene07262:CDS | 45.0% | |
| ACACACACACAGAATGCAGA+AGG | - | chr1.3:61931092-61931111 | None:intergenic | 45.0% | |
| AGAGGAAGTTGAGAAGCTCA+AGG | + | chr1.3:61933256-61933275 | MS.gene07262:CDS | 45.0% | |
| AGCCAGGTCCCTATATTTGT+CGG | - | chr1.3:61932513-61932532 | None:intergenic | 45.0% | |
| AGCTGCAGTTAGTGAAGACT+TGG | + | chr1.3:61932759-61932778 | MS.gene07262:intron | 45.0% | |
| AGTGGAAGACTTGGACGAAT+TGG | + | chr1.3:61933175-61933194 | MS.gene07262:CDS | 45.0% | |
| AGTTAGTGAAGACTTGGAGG+TGG | + | chr1.3:61932765-61932784 | MS.gene07262:intron | 45.0% | |
| ATTGCGAAGCATGTTGGTGT+TGG | + | chr1.3:61930933-61930952 | MS.gene07262:intron | 45.0% | |
| CTCTTCAATTCGGGCAAACA+CGG | - | chr1.3:61933240-61933259 | None:intergenic | 45.0% | |
| GAGGAAGTTGAGAAGCTCAA+GGG | + | chr1.3:61933257-61933276 | MS.gene07262:CDS | 45.0% | |
| GCGTCTCAATGTGATTCTCT+TGG | + | chr1.3:61930293-61930312 | MS.gene07262:intron | 45.0% | |
| GCTCCGGAATATGAAAAGCT+CGG | + | chr1.3:61930799-61930818 | MS.gene07262:CDS | 45.0% | |
| GGAACAAGTCGAGATGCAAA+AGG | + | chr1.3:61932958-61932977 | MS.gene07262:CDS | 45.0% | |
| GTCCTGGTTTCATCCAATCA+TGG | + | chr1.3:61932233-61932252 | MS.gene07262:intron | 45.0% | |
| GTTAGCACCACTACATGAGA+TGG | - | chr1.3:61932044-61932063 | None:intergenic | 45.0% | |
| TACAGCTCCATCTCATGTAG+TGG | + | chr1.3:61932034-61932053 | MS.gene07262:CDS | 45.0% | |
| TCCACCTCCATAATCTTCAC+CGG | - | chr1.3:61932896-61932915 | None:intergenic | 45.0% | |
| TGCAGTTAGTGAAGACTTGG+AGG | + | chr1.3:61932762-61932781 | MS.gene07262:intron | 45.0% | |
| TTATGGAGGTGGAAGAGACT+TGG | + | chr1.3:61932903-61932922 | MS.gene07262:CDS | 45.0% | |
| TTGGTGAGTAGTGAGTACCA+TGG | - | chr1.3:61932131-61932150 | None:intergenic | 45.0% | |
| ! | AATCTCCTCGGTTTGTAGAC+AGG | - | chr1.3:61930962-61930981 | None:intergenic | 45.0% |
| ! | ACACTGCAAAAAGCTTGCTC+CGG | + | chr1.3:61930783-61930802 | MS.gene07262:CDS | 45.0% |
| ! | AGCTTGGTAACAGGAAAACC+AGG | - | chr1.3:61930873-61930892 | None:intergenic | 45.0% |
| ! | CTTGGTAACAGGAAAACCAG+GGG | - | chr1.3:61930871-61930890 | None:intergenic | 45.0% |
| ! | GCTTGGTAACAGGAAAACCA+GGG | - | chr1.3:61930872-61930891 | None:intergenic | 45.0% |
| ! | TTGGTAACAGGAAAACCAGG+GGG | - | chr1.3:61930870-61930889 | None:intergenic | 45.0% |
| !!! | ATTTTTTTCATATAAAAAAT+TGG | + | chr1.3:61933049-61933068 | MS.gene07262:intron | 5.0% |
| !!! | TTTTACAAATTTTAATTATT+TGG | + | chr1.3:61933696-61933715 | MS.gene07262:intron | 5.0% |
| AAAATTGGCGGCAGTGGACA+TGG | + | chr1.3:61933064-61933083 | MS.gene07262:intron | 50.0% | |
| AAGTAAAGGCGGAGGAGAGT+TGG | + | chr1.3:61931205-61931224 | MS.gene07262:intron | 50.0% | |
| AGCTCAAGGGTTCTGCTTCT+AGG | + | chr1.3:61933270-61933289 | MS.gene07262:CDS | 50.0% | |
| AGGGTGGCACTATGTTTCCT+TGG | - | chr1.3:61931738-61931757 | None:intergenic | 50.0% | |
| ATCAGTTTCAGCAGACGACG+TGG | + | chr1.3:61929593-61929612 | MS.gene07262:CDS | 50.0% | |
| CGTGTTTGCCCGAATTGAAG+AGG | + | chr1.3:61933238-61933257 | MS.gene07262:CDS | 50.0% | |
| GCAGCAAATATGGCGTCTCT+GGG | + | chr1.3:61931397-61931416 | MS.gene07262:CDS | 50.0% | |
| GGAAACATAGTGCCACCCTT+CGG | + | chr1.3:61931739-61931758 | MS.gene07262:intron | 50.0% | |
| GGATACCTGTCTACAAACCG+AGG | + | chr1.3:61930954-61930973 | MS.gene07262:intron | 50.0% | |
| TCAATTCGTCGGCCTTAGCA+GGG | - | chr1.3:61933820-61933839 | None:intergenic | 50.0% | |
| TGCAGCAAATATGGCGTCTC+TGG | + | chr1.3:61931396-61931415 | MS.gene07262:CDS | 50.0% | |
| TGCCGACAAATATAGGGACC+TGG | + | chr1.3:61932508-61932527 | MS.gene07262:CDS | 50.0% | |
| TTCCCAAAGGGCAACAAAGC+CGG | + | chr1.3:61932874-61932893 | MS.gene07262:CDS | 50.0% | |
| ! | GCCCTTTGGGAAGAACTTCA+AGG | - | chr1.3:61932866-61932885 | None:intergenic | 50.0% |
| ! | GGCTGGTATAGTGGAAGACT+TGG | + | chr1.3:61933166-61933185 | MS.gene07262:intron | 50.0% |
| CTGGGTACCCAACGATTCAG+TGG | + | chr1.3:61931415-61931434 | MS.gene07262:CDS | 55.0% | |
| GAGGAGAGTTGGACCATCCT+GGG | + | chr1.3:61931216-61931235 | MS.gene07262:intron | 55.0% | |
| GCAAGTGATTCTGCAGTGCG+TGG | - | chr1.3:61931608-61931627 | None:intergenic | 55.0% | |
| GCAGTCTATCAGCCCTGCTA+AGG | + | chr1.3:61933805-61933824 | MS.gene07262:intron | 55.0% | |
| GCAGTGGACATGGTGGCTTT+GGG | + | chr1.3:61933074-61933093 | MS.gene07262:intron | 55.0% | |
| GCCGGTGAAGATTATGGAGG+TGG | + | chr1.3:61932892-61932911 | MS.gene07262:CDS | 55.0% | |
| GTCAATTCGTCGGCCTTAGC+AGG | - | chr1.3:61933821-61933840 | None:intergenic | 55.0% | |
| TCGTTGAGTTCTACGCCCCT+TGG | + | chr1.3:61929670-61929689 | MS.gene07262:CDS | 55.0% | |
| ! | CAGTGGACATGGTGGCTTTG+GGG | + | chr1.3:61933075-61933094 | MS.gene07262:intron | 55.0% |
| !! | CACCGGCTTTGTTGCCCTTT+GGG | - | chr1.3:61932879-61932898 | None:intergenic | 55.0% |
| !! | TCACCGGCTTTGTTGCCCTT+TGG | - | chr1.3:61932880-61932899 | None:intergenic | 55.0% |
| ATTGGCGGCAGTGGACATGG+TGG | + | chr1.3:61933067-61933086 | MS.gene07262:intron | 60.0% | |
| GAAAACCAGGGGGCTGACCT+TGG | - | chr1.3:61930860-61930879 | None:intergenic | 60.0% | |
| GCGTGGCCCTTCAAACCTAC+AGG | - | chr1.3:61931591-61931610 | None:intergenic | 60.0% | |
| GGAGGAGAGTTGGACCATCC+TGG | + | chr1.3:61931215-61931234 | MS.gene07262:intron | 60.0% | |
| GGCAGTGGACATGGTGGCTT+TGG | + | chr1.3:61933073-61933092 | MS.gene07262:intron | 60.0% | |
| !! | GGACATGGTGGCTTTGGGGT+GGG | + | chr1.3:61933079-61933098 | MS.gene07262:intron | 60.0% |
| !! | GGTGGCTTTGGGGTGGGATA+AGG | + | chr1.3:61933085-61933104 | MS.gene07262:intron | 60.0% |
| !! | TGGACATGGTGGCTTTGGGG+TGG | + | chr1.3:61933078-61933097 | MS.gene07262:intron | 60.0% |
| GATTGCCAAGGTCAGCCCCC+TGG | + | chr1.3:61930852-61930871 | MS.gene07262:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 61929522 | 61933874 | 61929522 | ID=MS.gene07262 |
| chr1.3 | mRNA | 61929522 | 61933874 | 61929522 | ID=MS.gene07262.t1;Parent=MS.gene07262 |
| chr1.3 | exon | 61929522 | 61929691 | 61929522 | ID=MS.gene07262.t1.exon1;Parent=MS.gene07262.t1 |
| chr1.3 | CDS | 61929522 | 61929691 | 61929522 | ID=cds.MS.gene07262.t1;Parent=MS.gene07262.t1 |
| chr1.3 | exon | 61930777 | 61930861 | 61930777 | ID=MS.gene07262.t1.exon2;Parent=MS.gene07262.t1 |
| chr1.3 | CDS | 61930777 | 61930861 | 61930777 | ID=cds.MS.gene07262.t1;Parent=MS.gene07262.t1 |
| chr1.3 | exon | 61931369 | 61931466 | 61931369 | ID=MS.gene07262.t1.exon3;Parent=MS.gene07262.t1 |
| chr1.3 | CDS | 61931369 | 61931466 | 61931369 | ID=cds.MS.gene07262.t1;Parent=MS.gene07262.t1 |
| chr1.3 | exon | 61931595 | 61931650 | 61931595 | ID=MS.gene07262.t1.exon4;Parent=MS.gene07262.t1 |
| chr1.3 | CDS | 61931595 | 61931650 | 61931595 | ID=cds.MS.gene07262.t1;Parent=MS.gene07262.t1 |
| chr1.3 | exon | 61932015 | 61932132 | 61932015 | ID=MS.gene07262.t1.exon5;Parent=MS.gene07262.t1 |
| chr1.3 | CDS | 61932015 | 61932132 | 61932015 | ID=cds.MS.gene07262.t1;Parent=MS.gene07262.t1 |
| chr1.3 | exon | 61932315 | 61932342 | 61932315 | ID=MS.gene07262.t1.exon6;Parent=MS.gene07262.t1 |
| chr1.3 | CDS | 61932315 | 61932342 | 61932315 | ID=cds.MS.gene07262.t1;Parent=MS.gene07262.t1 |
| chr1.3 | exon | 61932446 | 61932537 | 61932446 | ID=MS.gene07262.t1.exon7;Parent=MS.gene07262.t1 |
| chr1.3 | CDS | 61932446 | 61932537 | 61932446 | ID=cds.MS.gene07262.t1;Parent=MS.gene07262.t1 |
| chr1.3 | exon | 61932840 | 61932996 | 61932840 | ID=MS.gene07262.t1.exon8;Parent=MS.gene07262.t1 |
| chr1.3 | CDS | 61932840 | 61932996 | 61932840 | ID=cds.MS.gene07262.t1;Parent=MS.gene07262.t1 |
| chr1.3 | exon | 61933167 | 61933291 | 61933167 | ID=MS.gene07262.t1.exon9;Parent=MS.gene07262.t1 |
| chr1.3 | CDS | 61933167 | 61933291 | 61933167 | ID=cds.MS.gene07262.t1;Parent=MS.gene07262.t1 |
| chr1.3 | exon | 61933462 | 61933561 | 61933462 | ID=MS.gene07262.t1.exon10;Parent=MS.gene07262.t1 |
| chr1.3 | CDS | 61933462 | 61933561 | 61933462 | ID=cds.MS.gene07262.t1;Parent=MS.gene07262.t1 |
| chr1.3 | exon | 61933809 | 61933874 | 61933809 | ID=MS.gene07262.t1.exon11;Parent=MS.gene07262.t1 |
| chr1.3 | CDS | 61933809 | 61933874 | 61933809 | ID=cds.MS.gene07262.t1;Parent=MS.gene07262.t1 |
| Gene Sequence |
| Protein sequence |