AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene027345

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene027345.t1 MTR_7g053200 97.902 429 7 2 1 429 1 427 0.0 848
MS.gene027345.t1 MTR_8g011780 62.827 382 133 5 7 381 14 393 5.86e-169 481
MS.gene027345.t1 MTR_4g065080 39.378 386 210 8 8 374 10 390 3.94e-93 287
MS.gene027345.t1 MTR_2g098240 41.761 352 172 6 6 352 10 333 1.03e-88 275
MS.gene027345.t1 MTR_1g060790 39.623 371 194 9 1 352 462 821 9.30e-75 250
MS.gene027345.t1 MTR_2g062850 38.859 368 189 11 8 352 166 520 8.08e-74 241
MS.gene027345.t1 MTR_2g018990 36.538 364 200 10 8 352 74 425 7.23e-73 236
MS.gene027345.t1 MTR_7g104180 39.516 372 195 10 1 353 484 844 1.31e-72 244
MS.gene027345.t1 MTR_6g004720 35.979 378 215 9 8 367 248 616 8.48e-72 238
MS.gene027345.t1 MTR_8g089420 36.074 377 190 11 6 352 68 423 1.77e-70 229
MS.gene027345.t1 MTR_7g081665 35.941 409 226 11 8 396 361 753 1.84e-70 237
MS.gene027345.t1 MTR_3g010260 36.939 379 193 11 3 353 409 769 3.24e-70 237
MS.gene027345.t1 MTR_2g027240 36.022 372 204 9 7 353 200 562 8.54e-70 232
MS.gene027345.t1 MTR_4g113790 36.118 407 206 12 1 366 83 476 2.92e-68 225
MS.gene027345.t1 MTR_7g033640 35.200 375 209 9 8 357 229 594 4.00e-67 225
MS.gene027345.t1 MTR_8g006870 35.714 364 204 8 8 351 367 720 1.59e-66 226
MS.gene027345.t1 MTR_8g070530 36.080 352 177 8 5 349 591 901 4.38e-66 227
MS.gene027345.t1 MTR_2g085065 37.322 351 186 9 12 339 90 429 5.81e-66 218
MS.gene027345.t1 MTR_8g446990 35.829 374 196 9 8 354 129 485 1.26e-65 219
MS.gene027345.t1 MTR_2g069990 36.236 356 188 9 8 351 91 419 7.12e-65 216
MS.gene027345.t1 MTR_2g095980 35.795 352 185 8 5 349 365 682 4.22e-64 219
MS.gene027345.t1 MTR_2g095980 35.593 354 187 8 5 351 620 939 6.01e-63 219
MS.gene027345.t1 MTR_2g095980 35.593 354 187 8 5 351 620 939 1.05e-62 218
MS.gene027345.t1 MTR_4g061610 34.262 359 171 10 5 351 638 943 2.38e-60 211
MS.gene027345.t1 MTR_6g470940 33.994 353 182 9 12 355 876 1186 4.59e-49 179
MS.gene027345.t1 MTR_5g069000 31.944 360 197 8 10 362 760 1078 5.05e-47 174
MS.gene027345.t1 MTR_4g035835 31.944 360 197 8 10 362 756 1074 1.35e-46 172
MS.gene027345.t1 MTR_1g069735 29.945 364 214 11 12 366 119 450 1.82e-43 158
MS.gene027345.t1 MTR_1g069735 29.945 364 214 11 12 366 119 450 2.78e-43 158
MS.gene027345.t1 MTR_4g107280 30.447 358 162 11 12 354 88 373 6.56e-43 156
MS.gene027345.t1 MTR_1g069735 29.945 364 214 11 12 366 119 450 1.03e-42 158
MS.gene027345.t1 MTR_1g019340 32.647 340 188 12 16 345 111 419 6.53e-42 154
MS.gene027345.t1 MTR_7g073520 28.940 349 168 9 12 352 147 423 1.55e-41 153
MS.gene027345.t1 MTR_1g019340 32.647 340 188 12 16 345 111 419 2.83e-41 153
MS.gene027345.t1 MTR_1g075880 29.121 364 218 11 12 366 116 448 3.49e-39 148
MS.gene027345.t1 MTR_7g097150 29.464 336 198 9 12 339 119 423 1.13e-38 146
MS.gene027345.t1 MTR_1g442790 29.444 360 215 11 16 366 113 442 1.24e-38 146
MS.gene027345.t1 MTR_1g442790 29.444 360 215 11 16 366 113 442 2.36e-38 145
MS.gene027345.t1 MTR_1g042700 29.360 344 208 9 16 353 118 432 5.35e-38 144
MS.gene027345.t1 MTR_3g104700 29.545 352 198 11 12 345 93 412 7.25e-38 144
MS.gene027345.t1 MTR_2g040150 29.023 348 199 11 12 342 112 428 8.54e-36 138
MS.gene027345.t1 MTR_3g104700 28.726 369 196 13 12 345 93 429 4.32e-35 136
MS.gene027345.t1 MTR_1g090917 31.270 307 147 8 42 342 78 326 5.10e-33 130
MS.gene027345.t1 MTR_1g090917 31.270 307 147 8 42 342 78 326 5.50e-33 130
MS.gene027345.t1 MTR_4g107280 27.762 353 139 11 12 354 88 334 1.76e-31 124
MS.gene027345.t1 MTR_1g090917 31.496 254 115 6 95 342 1 201 9.23e-27 110
MS.gene027345.t1 MTR_1g090917 31.496 254 115 6 95 342 1 201 1.03e-26 110
MS.gene027345.t1 MTR_2g020380 26.738 374 199 11 15 385 6 307 4.76e-26 111
MS.gene027345.t1 MTR_3g110405 26.959 319 157 8 19 334 43 288 1.83e-25 105
MS.gene027345.t1 MTR_4g128820 29.373 303 143 9 35 335 30 263 5.08e-24 103
MS.gene027345.t1 MTR_5g045190 25.455 330 169 9 14 339 240 496 2.37e-22 100
MS.gene027345.t1 MTR_2g100030 25.356 351 197 9 8 343 13 313 9.14e-19 89.0
MS.gene027345.t1 MTR_3g072320 25.786 318 151 8 19 328 18 258 1.16e-17 85.1
MS.gene027345.t1 MTR_7g072605 26.923 338 176 9 10 343 13 283 2.14e-17 84.3
MS.gene027345.t1 MTR_3g088715 36.111 108 62 2 233 335 21 126 4.13e-17 78.2
MS.gene027345.t1 MTR_4g051648 25.000 344 176 11 14 352 9 275 6.74e-17 84.0
MS.gene027345.t1 MTR_3g466480 31.111 180 112 4 18 195 26 195 7.32e-17 82.8
MS.gene027345.t1 MTR_8g035890 36.449 107 61 2 234 335 164 268 3.54e-16 79.0
MS.gene027345.t1 MTR_8g035890 33.758 157 93 4 12 167 15 161 3.97e-15 75.9
MS.gene027345.t1 MTR_8g086380 33.557 149 89 3 19 167 32 170 3.97e-16 80.9
MS.gene027345.t1 MTR_7g113490 30.263 152 102 2 19 170 74 221 3.44e-15 78.2
MS.gene027345.t1 MTR_7g092360 22.671 322 174 8 14 331 17 267 4.05e-15 77.8
MS.gene027345.t1 MTR_6g087000 34.783 115 69 3 234 342 909 1023 1.05e-14 77.0
MS.gene027345.t1 MTR_6g006770 24.581 358 181 12 8 348 11 296 1.23e-14 76.3
MS.gene027345.t1 MTR_8g040300 35.922 103 59 2 234 331 158 258 1.24e-14 74.3
MS.gene027345.t1 MTR_8g040300 26.941 219 137 5 12 222 9 212 1.94e-12 67.8
MS.gene027345.t1 MTR_1g105290 30.519 154 99 4 19 170 61 208 1.82e-14 75.9
MS.gene027345.t1 MTR_2g078740 22.393 326 178 9 16 338 18 271 1.91e-14 75.9
MS.gene027345.t1 MTR_2g078740 22.393 326 178 9 16 338 18 271 1.98e-14 75.9
MS.gene027345.t1 MTR_2g016340 26.486 185 124 4 7 189 6 180 2.02e-14 75.1
MS.gene027345.t1 MTR_2g078740 22.393 326 178 9 16 338 18 271 2.14e-14 75.9
MS.gene027345.t1 MTR_1g105290 30.519 154 99 4 19 170 61 208 2.27e-14 75.5
MS.gene027345.t1 MTR_1g105290 30.519 154 99 4 19 170 61 208 2.51e-14 75.5
MS.gene027345.t1 MTR_3g096230 29.936 157 101 4 19 174 250 398 4.73e-14 74.3
MS.gene027345.t1 MTR_4g029020 28.902 173 111 4 19 189 18 180 7.30e-14 73.6
MS.gene027345.t1 MTR_3g096230 29.936 157 101 4 19 174 250 398 7.82e-14 73.9
MS.gene027345.t1 MTR_8g024590 21.944 319 179 7 18 335 22 271 9.43e-14 73.2
MS.gene027345.t1 MTR_3g466400 28.188 149 97 3 19 167 20 158 9.81e-14 73.2
MS.gene027345.t1 MTR_3g466400 33.333 120 76 3 218 335 152 269 6.13e-12 67.8
MS.gene027345.t1 MTR_1g052115 28.824 170 110 4 10 177 1 161 2.47e-13 72.8
MS.gene027345.t1 MTR_1g100250 27.922 154 102 4 19 171 417 562 2.64e-13 72.4
MS.gene027345.t1 MTR_5g075060 26.816 179 119 4 19 195 18 186 2.89e-13 71.6
MS.gene027345.t1 MTR_5g075060 39.394 99 58 2 239 335 169 267 3.87e-11 65.1
MS.gene027345.t1 MTR_8g093730 28.758 153 100 4 19 170 305 449 2.92e-13 72.0
MS.gene027345.t1 MTR_3g076540 26.923 182 94 3 102 283 77 219 3.19e-13 70.9
MS.gene027345.t1 MTR_3g076540 26.923 182 94 3 102 283 94 236 3.46e-13 70.9
MS.gene027345.t1 MTR_7g116390 36.975 119 67 3 236 348 170 286 3.55e-13 70.1
MS.gene027345.t1 MTR_3g076540 26.531 196 102 4 102 297 176 329 4.17e-13 71.2
MS.gene027345.t1 MTR_5g026960 25.177 282 136 9 14 294 5 212 4.37e-13 71.2
MS.gene027345.t1 MTR_4g006970 30.380 158 100 3 10 167 17 164 4.43e-13 71.2
MS.gene027345.t1 MTR_1g103760 32.432 148 90 3 19 166 18 155 5.01e-13 70.9
MS.gene027345.t1 MTR_1g013700 31.169 154 94 4 60 207 53 200 6.88e-13 70.5
MS.gene027345.t1 MTR_1g013700 38.835 103 60 3 242 341 173 275 6.71e-11 64.3
MS.gene027345.t1 MTR_5g075100 32.215 149 92 3 19 167 29 168 9.03e-13 70.1
MS.gene027345.t1 MTR_5g075100 35.354 99 62 2 239 335 181 279 2.13e-11 65.9
MS.gene027345.t1 MTR_1g077800 37.838 111 54 3 239 338 174 280 1.04e-12 70.5
MS.gene027345.t1 MTR_1g077800 37.838 111 54 3 239 338 174 280 1.06e-12 70.5
MS.gene027345.t1 MTR_1g076370 27.326 172 117 4 64 229 65 234 1.26e-12 69.7
MS.gene027345.t1 MTR_7g106710 37.931 116 64 3 236 344 291 405 2.09e-12 68.9
MS.gene027345.t1 MTR_7g095450 21.779 326 180 8 14 335 5 259 2.35e-12 69.3
MS.gene027345.t1 MTR_7g106710 37.931 116 64 3 236 344 291 405 2.54e-12 68.9
MS.gene027345.t1 MTR_5g024270 27.018 285 170 12 102 370 125 387 2.94e-12 68.6
MS.gene027345.t1 MTR_1g101630 31.250 160 93 6 19 172 47 195 3.76e-12 68.6
MS.gene027345.t1 MTR_7g106710 37.931 116 64 3 236 344 291 405 4.09e-12 68.6
MS.gene027345.t1 MTR_7g106710 37.931 116 64 3 236 344 291 405 4.35e-12 68.6
MS.gene027345.t1 MTR_7g072575 28.324 173 112 4 19 189 18 180 4.62e-12 68.2
MS.gene027345.t1 MTR_5g008860 23.239 284 145 7 16 296 143 356 4.93e-12 68.2
MS.gene027345.t1 MTR_4g104620 27.869 183 91 5 102 283 86 228 5.18e-12 67.0
MS.gene027345.t1 MTR_4g104620 27.869 183 91 5 102 283 77 219 5.23e-12 67.0
MS.gene027345.t1 MTR_1g034030 36.893 103 57 4 240 334 178 280 5.43e-12 67.4
MS.gene027345.t1 MTR_1g081000 21.713 327 179 9 14 335 5 259 6.21e-12 67.8
MS.gene027345.t1 MTR_1g081000 21.713 327 179 9 14 335 5 259 6.58e-12 67.8
MS.gene027345.t1 MTR_8g098425 30.065 153 94 5 19 168 414 556 7.32e-12 67.8
MS.gene027345.t1 MTR_4g005730 35.200 125 66 3 225 338 169 289 8.62e-12 67.4
MS.gene027345.t1 MTR_8g024600 21.944 319 179 8 18 335 22 271 8.72e-12 67.0
MS.gene027345.t1 MTR_4g005730 35.200 125 66 3 225 338 169 289 8.84e-12 67.4
MS.gene027345.t1 MTR_4g104620 27.869 183 91 5 102 283 180 322 8.90e-12 67.0
MS.gene027345.t1 MTR_4g005730 35.200 125 66 3 225 338 169 289 9.13e-12 67.4
MS.gene027345.t1 MTR_8g100085 25.000 164 113 3 7 168 127 282 9.39e-12 67.0
MS.gene027345.t1 MTR_5g019700 29.143 175 101 7 3 169 33 192 1.14e-11 66.6
MS.gene027345.t1 MTR_1g080020 34.653 101 61 1 236 331 161 261 1.16e-11 65.5
MS.gene027345.t1 MTR_4g131060 26.667 150 100 3 18 167 23 162 1.17e-11 66.6
MS.gene027345.t1 MTR_7g011800 28.571 182 114 5 3 180 110 279 1.33e-11 67.0
MS.gene027345.t1 MTR_8g024100 27.650 217 130 8 19 223 21 222 1.85e-11 66.6
MS.gene027345.t1 MTR_4g114670 30.464 151 96 3 19 167 13 156 1.94e-11 65.9
MS.gene027345.t1 MTR_4g114670 30.464 151 96 3 19 167 13 156 2.47e-11 65.9
MS.gene027345.t1 MTR_5g024270 29.091 220 128 9 102 301 125 336 2.93e-11 65.1
MS.gene027345.t1 MTR_7g114300 23.016 252 132 3 45 293 128 320 3.03e-11 65.1
MS.gene027345.t1 MTR_7g114300 23.016 252 132 3 45 293 128 320 3.25e-11 65.1
MS.gene027345.t1 MTR_2g045470 28.333 180 118 4 18 195 25 195 3.38e-11 65.5
MS.gene027345.t1 MTR_6g007603 27.517 149 89 4 64 194 118 265 3.39e-11 65.1
MS.gene027345.t1 MTR_1g052530 35.455 110 61 3 236 338 208 314 4.18e-11 64.7
MS.gene027345.t1 MTR_0464s0040 29.605 152 99 2 39 190 36 179 4.44e-11 62.4
MS.gene027345.t1 MTR_4g075410 24.699 166 117 2 19 184 26 183 5.33e-11 65.5
MS.gene027345.t1 MTR_4g075410 24.699 166 117 2 19 184 26 183 5.40e-11 65.5
MS.gene027345.t1 MTR_3g099920 35.354 99 62 2 239 335 174 272 6.03e-11 64.7
MS.gene027345.t1 MTR_3g099767 28.324 173 106 6 18 189 117 272 6.83e-11 64.3
MS.gene027345.t1 MTR_8g071230 22.191 356 171 11 14 337 5 286 6.97e-11 64.3
MS.gene027345.t1 MTR_1g052530 35.455 110 61 3 236 338 208 314 7.43e-11 64.3
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene027345.t1 AT3G25250 51.732 433 177 11 7 429 11 421 1.93e-134 393
MS.gene027345.t1 AT4G13000 56.334 371 136 7 7 375 14 360 9.51e-133 387
MS.gene027345.t1 AT3G20830 40.166 361 187 8 6 352 14 359 8.93e-84 263
MS.gene027345.t1 AT1G51170 39.402 368 192 8 8 361 17 367 5.69e-83 260
MS.gene027345.t1 AT3G12690 39.247 372 180 9 5 352 177 526 6.69e-77 250
MS.gene027345.t1 AT3G12690 39.247 372 180 9 5 352 177 526 6.69e-77 250
MS.gene027345.t1 AT3G12690 39.247 372 180 9 5 352 177 526 6.69e-77 250
MS.gene027345.t1 AT2G34650 37.432 366 198 9 6 357 68 416 8.04e-76 243
MS.gene027345.t1 AT5G03640 38.381 383 185 11 3 352 531 895 7.61e-74 248
MS.gene027345.t1 AT5G03640 38.381 383 185 11 3 352 531 895 7.61e-74 248
MS.gene027345.t1 AT3G52890 38.564 376 190 10 7 352 532 896 7.23e-73 246
MS.gene027345.t1 AT3G52890 38.564 376 190 10 7 352 532 896 7.23e-73 246
MS.gene027345.t1 AT3G52890 38.564 376 190 10 7 352 532 896 7.23e-73 246
MS.gene027345.t1 AT3G52890 38.564 376 190 10 7 352 532 896 7.23e-73 246
MS.gene027345.t1 AT1G79250 36.951 387 214 10 5 371 138 514 8.61e-73 238
MS.gene027345.t1 AT1G79250 36.951 387 214 10 5 371 138 514 8.61e-73 238
MS.gene027345.t1 AT1G79250 36.951 387 214 10 5 371 138 514 8.61e-73 238
MS.gene027345.t1 AT1G79250 36.951 387 214 10 5 371 138 514 8.61e-73 238
MS.gene027345.t1 AT1G16440 38.133 375 213 8 5 370 105 469 1.13e-72 236
MS.gene027345.t1 AT2G36350 38.235 374 192 9 7 352 553 915 1.39e-71 243
MS.gene027345.t1 AT5G40030 38.978 372 186 12 6 353 107 461 2.29e-71 233
MS.gene027345.t1 AT2G26700 31.839 446 228 9 5 384 79 514 5.21e-70 230
MS.gene027345.t1 AT5G58140 35.772 369 186 9 1 360 565 891 8.63e-70 237
MS.gene027345.t1 AT5G58140 35.772 369 186 9 1 360 565 891 8.63e-70 237
MS.gene027345.t1 AT5G58140 35.772 369 186 9 1 360 565 891 8.63e-70 237
MS.gene027345.t1 AT5G58140 35.772 369 186 9 1 360 565 891 8.63e-70 237
MS.gene027345.t1 AT5G58140 35.772 369 186 9 1 360 565 891 8.63e-70 237
MS.gene027345.t1 AT5G47750 36.216 370 202 9 8 353 186 545 2.08e-69 230
MS.gene027345.t1 AT5G55910 34.759 374 211 8 3 353 101 464 2.77e-69 228
MS.gene027345.t1 AT5G55910 34.759 374 211 8 3 353 101 464 2.77e-69 228
MS.gene027345.t1 AT5G58140 36.599 347 170 8 1 339 565 869 1.64e-68 234
MS.gene027345.t1 AT4G26610 34.232 371 213 8 3 353 115 474 1.74e-68 226
MS.gene027345.t1 AT1G53700 37.360 356 184 8 8 351 88 416 1.20e-66 220
MS.gene027345.t1 AT3G44610 35.345 348 202 6 19 343 75 422 3.22e-66 218
MS.gene027345.t1 AT3G27580 35.389 373 205 10 5 353 174 534 1.37e-65 220
MS.gene027345.t1 AT3G27580 35.389 373 205 10 5 353 174 534 1.37e-65 220
MS.gene027345.t1 AT2G44830 35.659 387 214 11 8 370 358 733 4.05e-65 223
MS.gene027345.t1 AT2G44830 35.659 387 214 11 8 370 358 733 4.05e-65 223
MS.gene027345.t1 AT2G44830 35.659 387 214 11 8 370 358 733 4.05e-65 223
MS.gene027345.t1 AT3G14370 35.795 352 192 9 8 349 83 410 4.93e-63 211
MS.gene027345.t1 AT3G45780 33.708 356 185 7 5 351 655 968 1.42e-62 218
MS.gene027345.t1 AT3G45780 33.708 356 185 7 5 351 655 968 1.42e-62 218
MS.gene027345.t1 AT1G45160 33.799 358 180 9 8 355 665 975 6.56e-50 182
MS.gene027345.t1 AT1G45160 34.181 354 176 9 12 355 669 975 8.40e-50 182
MS.gene027345.t1 AT5G62310 29.880 415 240 9 10 413 751 1125 6.29e-48 176
MS.gene027345.t1 AT1G48490 30.730 397 217 11 3 389 818 1166 2.10e-47 175
MS.gene027345.t1 AT1G48490 30.730 397 217 11 3 389 818 1166 2.10e-47 175
MS.gene027345.t1 AT1G48490 30.730 397 217 11 3 389 818 1166 2.10e-47 175
MS.gene027345.t1 AT1G48490 30.730 397 217 11 3 389 819 1167 2.21e-47 175
MS.gene027345.t1 AT3G17850 31.492 362 197 8 3 355 872 1191 2.05e-46 172
MS.gene027345.t1 AT1G30640 31.143 350 206 10 12 353 26 348 2.50e-42 155
MS.gene027345.t1 AT1G30640 31.143 350 206 10 12 353 119 441 6.46e-42 156
MS.gene027345.t1 AT1G30640 31.143 350 206 10 12 353 119 441 6.46e-42 156
MS.gene027345.t1 AT5G09890 31.287 342 200 10 12 345 101 415 1.57e-40 151
MS.gene027345.t1 AT5G09890 31.287 342 200 10 12 345 101 415 1.58e-40 151
MS.gene027345.t1 AT3G10540 30.599 317 156 8 42 352 72 330 1.06e-39 149
MS.gene027345.t1 AT3G08730 29.341 334 158 9 12 339 133 394 1.24e-39 148
MS.gene027345.t1 AT3G08730 29.341 334 158 9 12 339 133 394 1.24e-39 148
MS.gene027345.t1 AT2G20470 27.926 376 213 11 8 366 119 453 2.29e-39 148
MS.gene027345.t1 AT3G08720 29.204 339 162 9 7 339 134 400 2.37e-39 147
MS.gene027345.t1 AT3G08720 29.204 339 162 9 7 339 134 400 2.37e-39 147
MS.gene027345.t1 AT3G08720 29.204 339 162 9 7 339 134 400 2.37e-39 147
MS.gene027345.t1 AT3G08720 29.204 339 162 9 7 339 134 400 2.37e-39 147
MS.gene027345.t1 AT2G20470 27.926 376 213 11 8 366 119 453 3.49e-39 148
MS.gene027345.t1 AT2G20470 27.926 376 213 11 8 366 119 453 3.49e-39 148
MS.gene027345.t1 AT4G14350 28.652 356 195 11 16 353 122 436 1.03e-37 144
MS.gene027345.t1 AT4G14350 28.652 356 195 11 16 353 122 436 1.09e-37 144
MS.gene027345.t1 AT4G14350 28.652 356 195 11 16 353 122 436 1.09e-37 144
MS.gene027345.t1 AT4G14350 28.652 356 195 11 16 353 122 436 1.09e-37 144
MS.gene027345.t1 AT2G19400 28.329 353 203 11 12 345 104 425 3.16e-37 142
MS.gene027345.t1 AT5G04510 29.338 317 160 8 42 352 71 329 5.46e-37 140
MS.gene027345.t1 AT5G04510 29.338 317 160 8 42 352 71 329 1.25e-36 140
MS.gene027345.t1 AT1G03920 26.810 373 218 10 12 368 23 356 5.38e-36 138
MS.gene027345.t1 AT1G03920 27.346 373 216 10 12 368 136 469 8.54e-36 139
MS.gene027345.t1 AT1G03920 27.346 373 216 10 12 368 136 469 8.54e-36 139
MS.gene027345.t1 AT3G23310 28.453 362 190 11 16 353 123 439 9.71e-36 139
MS.gene027345.t1 AT4G33080 28.457 376 214 14 12 366 93 434 1.03e-35 138
MS.gene027345.t1 AT4G33080 28.531 354 200 12 12 345 93 413 1.21e-35 138
MS.gene027345.t1 AT5G04510 29.455 275 135 7 42 315 71 287 2.79e-31 122
MS.gene027345.t1 AT2G25090 26.936 297 157 6 41 335 41 279 1.46e-25 108
MS.gene027345.t1 AT2G30360 27.564 312 157 7 19 328 27 271 7.37e-25 106
MS.gene027345.t1 AT1G29230 27.273 319 161 7 19 335 80 329 8.59e-25 107
MS.gene027345.t1 AT2G25880 26.646 319 158 8 19 334 31 276 2.36e-24 102
MS.gene027345.t1 AT2G25880 26.899 316 155 8 19 331 44 286 3.06e-24 102
MS.gene027345.t1 AT2G25880 26.899 316 155 8 19 331 92 334 8.30e-24 102
MS.gene027345.t1 AT4G32830 26.332 319 159 8 19 334 37 282 1.02e-23 100
MS.gene027345.t1 AT2G34180 26.019 319 165 7 19 335 63 312 1.19e-22 100
MS.gene027345.t1 AT1G18350 23.615 343 180 9 1 335 36 304 2.94e-22 97.1
MS.gene027345.t1 AT5G18700 36.364 165 88 5 15 177 6 155 3.02e-21 97.4
MS.gene027345.t1 AT5G01820 26.829 328 169 8 10 335 19 277 3.26e-20 92.8
MS.gene027345.t1 AT1G69220 25.076 327 170 8 16 338 252 507 5.05e-20 93.2
MS.gene027345.t1 AT4G04700 23.967 363 181 12 8 360 22 299 1.63e-19 90.9
MS.gene027345.t1 AT1G69220 24.845 322 167 8 21 338 230 480 1.08e-18 89.4
MS.gene027345.t1 AT3G29160 25.959 339 171 12 2 335 10 273 8.13e-18 84.7
MS.gene027345.t1 AT2G38490 26.269 335 175 8 19 350 34 299 8.29e-18 85.5
MS.gene027345.t1 AT3G29160 25.959 339 171 12 2 335 10 273 1.78e-17 85.1
MS.gene027345.t1 AT3G29160 25.959 339 171 12 2 335 10 273 1.78e-17 85.1
MS.gene027345.t1 AT2G45490 36.449 107 62 2 234 334 167 273 4.76e-17 81.6
MS.gene027345.t1 AT2G45490 28.111 217 137 7 12 222 21 224 4.76e-14 72.8
MS.gene027345.t1 AT1G73500 22.609 345 179 8 4 335 38 307 7.25e-17 81.3
MS.gene027345.t1 AT4G26070 23.894 339 175 9 8 335 63 329 8.45e-17 81.6
MS.gene027345.t1 AT4G26070 23.894 339 175 9 8 335 63 329 8.45e-17 81.6
MS.gene027345.t1 AT3G20860 22.531 324 177 8 15 335 6 258 8.50e-17 82.4
MS.gene027345.t1 AT4G26070 23.894 339 175 9 8 335 50 316 8.70e-17 81.6
MS.gene027345.t1 AT1G09000 29.605 152 103 2 19 170 75 222 8.74e-17 83.2
MS.gene027345.t1 AT1G54960 30.128 156 97 4 19 170 74 221 8.85e-17 83.2
MS.gene027345.t1 AT1G54960 30.128 156 97 4 19 170 74 221 8.85e-17 83.2
MS.gene027345.t1 AT1G09000 29.605 152 103 2 19 170 75 222 1.06e-16 82.8
MS.gene027345.t1 AT4G26070 23.894 339 175 9 8 335 62 328 1.14e-16 81.3
MS.gene027345.t1 AT4G18700 34.899 149 87 3 19 167 32 170 1.16e-16 82.4
MS.gene027345.t1 AT4G18700 39.394 99 58 2 239 335 183 281 4.03e-11 65.1
MS.gene027345.t1 AT5G45810 35.570 149 86 3 19 167 34 172 2.07e-16 81.6
MS.gene027345.t1 AT2G20050 37.069 116 66 3 234 342 928 1043 4.22e-16 81.3
MS.gene027345.t1 AT2G20050 37.069 116 66 3 234 342 931 1046 4.38e-16 81.3
MS.gene027345.t1 AT3G06030 31.579 152 100 2 19 170 74 221 4.77e-16 80.9
MS.gene027345.t1 AT3G44200 24.159 327 171 9 14 335 9 263 2.85e-15 78.6
MS.gene027345.t1 AT3G44200 24.159 327 171 9 14 335 9 263 2.85e-15 78.6
MS.gene027345.t1 AT5G25110 32.215 149 91 3 19 167 49 187 2.92e-15 78.2
MS.gene027345.t1 AT5G45820 29.319 191 122 5 1 189 1 180 6.53e-15 76.6
MS.gene027345.t1 AT1G53165 23.220 323 173 8 19 338 21 271 1.33e-14 76.3
MS.gene027345.t1 AT1G53165 23.220 323 173 8 19 338 21 271 1.58e-14 76.3
MS.gene027345.t1 AT5G01810 28.125 192 125 5 19 207 18 199 1.64e-14 75.5
MS.gene027345.t1 AT5G01810 28.125 192 125 5 19 207 18 199 1.64e-14 75.5
MS.gene027345.t1 AT1G53165 23.220 323 173 8 19 338 21 271 1.71e-14 76.3
MS.gene027345.t1 AT5G57630 30.488 164 103 4 33 195 30 183 1.99e-14 75.1
MS.gene027345.t1 AT5G57630 30.488 164 103 4 33 195 30 183 2.11e-14 75.1
MS.gene027345.t1 AT5G01810 29.480 173 110 4 19 189 18 180 2.27e-14 74.7
MS.gene027345.t1 AT2G45490 28.111 217 137 7 12 222 21 224 2.39e-14 73.2
MS.gene027345.t1 AT2G45490 36.364 88 50 2 234 315 167 254 1.15e-11 65.1
MS.gene027345.t1 AT5G10930 33.333 129 79 2 39 167 36 157 2.80e-14 74.7
MS.gene027345.t1 AT5G58140 31.452 124 78 2 1 124 565 681 2.81e-14 75.5
MS.gene027345.t1 AT1G54510 21.196 368 210 9 16 373 7 304 6.53e-14 74.3
MS.gene027345.t1 AT1G54510 21.196 368 210 9 16 373 7 304 6.53e-14 74.3
MS.gene027345.t1 AT1G54510 21.196 368 210 9 16 373 7 304 6.53e-14 74.3
MS.gene027345.t1 AT1G54510 21.196 368 210 9 16 373 7 304 6.53e-14 74.3
MS.gene027345.t1 AT4G26070 24.042 287 145 7 8 293 63 277 9.43e-14 72.0
MS.gene027345.t1 AT1G53570 28.571 154 101 4 19 171 220 365 1.84e-13 72.4
MS.gene027345.t1 AT1G53570 28.571 154 101 4 19 171 220 365 1.90e-13 72.4
MS.gene027345.t1 AT1G53570 28.571 154 101 4 19 171 220 365 2.24e-13 72.4
MS.gene027345.t1 AT1G53570 28.571 154 101 4 19 171 220 365 2.24e-13 72.4
MS.gene027345.t1 AT1G53570 28.571 154 101 4 19 171 220 365 2.26e-13 72.4
MS.gene027345.t1 AT1G53570 28.571 154 101 4 19 171 220 365 2.30e-13 72.4
MS.gene027345.t1 AT3G15220 23.220 323 173 8 19 338 21 271 2.35e-13 72.4
MS.gene027345.t1 AT3G61960 28.241 216 130 7 19 223 16 217 3.09e-13 72.0
MS.gene027345.t1 AT3G01085 29.121 182 113 5 3 180 105 274 3.87e-13 71.6
MS.gene027345.t1 AT3G01085 29.121 182 113 5 3 180 105 274 4.01e-13 71.6
MS.gene027345.t1 AT3G01085 29.121 182 113 5 3 180 105 274 4.01e-13 71.6
MS.gene027345.t1 AT3G61960 28.241 216 130 7 19 223 16 217 4.03e-13 71.6
MS.gene027345.t1 AT4G19110 22.753 356 169 11 14 337 5 286 8.03e-13 70.5
MS.gene027345.t1 AT4G19110 22.753 356 169 11 14 337 5 286 8.85e-13 70.5
MS.gene027345.t1 AT1G08650 36.190 105 62 1 236 335 170 274 9.31e-13 68.9
MS.gene027345.t1 AT5G39440 41.935 93 53 1 243 334 178 270 1.79e-12 69.3
MS.gene027345.t1 AT1G08650 38.144 97 55 1 236 327 170 266 1.83e-12 67.8
MS.gene027345.t1 AT4G04720 39.604 101 55 2 241 336 241 340 1.88e-12 69.3
MS.gene027345.t1 AT4G04720 39.604 101 55 2 241 336 241 340 1.88e-12 69.3
MS.gene027345.t1 AT3G07980 20.000 335 196 8 3 335 11 275 2.08e-12 70.1
MS.gene027345.t1 AT5G58950 27.083 144 94 3 30 167 219 357 2.09e-12 69.3
MS.gene027345.t1 AT4G10730 36.000 125 65 3 225 338 192 312 2.32e-12 69.3
MS.gene027345.t1 AT4G10730 36.000 125 65 3 225 338 172 292 2.36e-12 69.3
MS.gene027345.t1 AT3G07980 20.000 335 196 8 3 335 11 275 2.62e-12 69.7
MS.gene027345.t1 AT1G30270 32.283 127 79 2 41 167 57 176 3.24e-12 68.6
MS.gene027345.t1 AT1G30270 32.283 127 79 2 41 167 57 176 3.84e-12 68.2
MS.gene027345.t1 AT4G33950 36.893 103 57 4 240 334 175 277 4.23e-12 67.4
MS.gene027345.t1 AT1G53050 30.147 136 92 1 48 180 158 293 4.32e-12 68.6
MS.gene027345.t1 AT1G53050 30.147 136 92 1 48 180 158 293 4.32e-12 68.6
MS.gene027345.t1 AT5G66850 27.273 154 104 4 19 171 352 498 4.55e-12 68.6
MS.gene027345.t1 AT4G29810 31.858 113 67 2 232 334 227 339 5.43e-12 67.4
MS.gene027345.t1 AT5G66850 27.273 154 104 4 19 171 352 498 5.72e-12 68.2
MS.gene027345.t1 AT4G29810 31.858 113 67 2 232 334 218 330 5.73e-12 67.4
MS.gene027345.t1 AT4G33950 36.893 103 57 4 240 334 175 277 6.65e-12 67.0
MS.gene027345.t1 AT5G58380 26.012 173 116 4 19 189 18 180 6.93e-12 67.4
MS.gene027345.t1 AT3G13530 24.725 182 128 3 3 184 11 183 7.72e-12 68.2
MS.gene027345.t1 AT2G25880 30.612 98 65 1 237 331 144 241 8.15e-12 65.5
MS.gene027345.t1 AT5G45430 22.472 356 168 11 15 337 6 286 8.69e-12 67.4
MS.gene027345.t1 AT5G45430 23.675 283 141 9 15 296 6 214 8.97e-12 67.4
MS.gene027345.t1 AT5G28290 22.812 320 170 9 14 328 5 252 1.05e-11 67.0
MS.gene027345.t1 AT5G28290 22.812 320 170 9 14 328 5 252 1.16e-11 67.0
MS.gene027345.t1 AT5G28290 22.812 320 170 9 14 328 5 252 1.16e-11 67.0
MS.gene027345.t1 AT5G07070 27.746 173 113 4 19 189 18 180 1.28e-11 66.6
MS.gene027345.t1 AT3G04810 30.061 163 101 5 12 171 3 155 1.42e-11 67.0
MS.gene027345.t1 AT3G04810 30.061 163 101 5 12 171 3 155 1.42e-11 67.0
MS.gene027345.t1 AT3G04810 30.061 163 101 5 12 171 3 155 1.42e-11 67.0
MS.gene027345.t1 AT4G24100 34.400 125 67 3 225 338 194 314 2.10e-11 66.6
MS.gene027345.t1 AT4G24100 34.400 125 67 3 225 338 178 298 2.11e-11 66.2
MS.gene027345.t1 AT4G24100 34.400 125 67 3 225 338 178 298 2.12e-11 66.2
MS.gene027345.t1 AT4G14580 26.667 180 120 5 19 195 27 197 2.13e-11 65.9
MS.gene027345.t1 AT4G24100 34.400 125 67 3 225 338 194 314 2.15e-11 66.2
MS.gene027345.t1 AT4G21940 33.824 136 78 4 212 336 228 362 2.20e-11 65.9
MS.gene027345.t1 AT4G04740 39.000 100 55 2 242 336 231 329 2.23e-11 66.2
MS.gene027345.t1 AT4G30960 30.769 104 69 1 64 167 68 168 2.24e-11 65.9
MS.gene027345.t1 AT2G26980 29.333 150 97 3 18 167 19 159 2.44e-11 65.5
MS.gene027345.t1 AT2G26980 29.333 150 97 3 18 167 19 159 2.54e-11 65.9
MS.gene027345.t1 AT4G04740 39.000 100 55 2 242 336 231 329 2.59e-11 65.9
MS.gene027345.t1 AT4G04740 39.000 100 55 2 242 336 231 329 2.59e-11 65.9
MS.gene027345.t1 AT4G04740 39.000 100 55 2 242 336 231 329 2.59e-11 65.9
MS.gene027345.t1 AT4G04740 39.000 100 55 2 242 336 231 329 2.59e-11 65.9
MS.gene027345.t1 AT4G04740 39.000 100 55 2 242 336 231 329 2.59e-11 65.9
MS.gene027345.t1 AT4G04740 39.000 100 55 2 242 336 231 329 2.59e-11 65.9
MS.gene027345.t1 AT4G21940 33.824 136 78 4 212 336 228 362 2.61e-11 65.9
MS.gene027345.t1 AT2G26980 29.333 150 97 3 18 167 29 169 2.65e-11 65.5
MS.gene027345.t1 AT4G21940 33.824 136 78 4 212 336 228 362 2.70e-11 65.9
MS.gene027345.t1 AT2G26980 27.222 180 120 4 18 195 19 189 3.43e-11 65.1
MS.gene027345.t1 AT1G79640 34.400 125 67 3 225 338 158 278 3.81e-11 65.5
MS.gene027345.t1 AT1G79640 34.400 125 67 3 225 338 158 278 3.84e-11 65.5
MS.gene027345.t1 AT1G63700 26.752 157 106 4 19 174 406 554 4.12e-11 65.5
MS.gene027345.t1 AT1G63700 26.752 157 106 4 19 174 406 554 4.12e-11 65.5
MS.gene027345.t1 AT1G79640 34.400 125 67 3 225 338 161 281 4.12e-11 65.5
MS.gene027345.t1 AT1G79640 34.400 125 67 3 225 338 158 278 4.30e-11 65.5
MS.gene027345.t1 AT1G79640 34.400 125 67 3 225 338 158 278 4.30e-11 65.5
MS.gene027345.t1 AT1G79640 34.400 125 67 3 225 338 158 278 4.30e-11 65.5
MS.gene027345.t1 AT5G21326 30.233 129 83 2 39 167 37 158 4.30e-11 65.1
MS.gene027345.t1 AT5G14720 32.800 125 69 3 225 338 161 281 4.59e-11 65.5
MS.gene027345.t1 AT5G14720 32.800 125 69 3 225 338 161 281 4.59e-11 65.5
MS.gene027345.t1 AT2G26980 27.222 180 120 4 18 195 19 189 4.66e-11 63.5
MS.gene027345.t1 AT5G39420 25.281 178 125 2 3 180 95 264 5.78e-11 65.1
MS.gene027345.t1 AT3G23000 27.933 179 119 4 19 196 31 200 6.14e-11 64.3
MS.gene027345.t1 AT4G40010 37.864 103 56 3 240 334 158 260 7.10e-11 63.9
MS.gene027345.t1 AT3G04530 32.710 107 67 1 236 337 166 272 8.80e-11 62.8

Find 81 sgRNAs with CRISPR-Local

Find 131 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCAATGAGTTTGGTGATTT+TGG 0.015954 7.4:-50027732 None:intergenic
TTTCAAACTGAAAAGCTTAT+TGG 0.148224 7.4:+50026862 MS.gene027345:CDS
CCTCTCTTGCCTAGGTTTAA+AGG 0.151835 7.4:+50026835 MS.gene027345:CDS
AAGGGTCATGATTTCTTTAA+AGG 0.154605 7.4:+50028203 MS.gene027345:CDS
TTAGGGAATGGACATAATTT+TGG 0.205600 7.4:+50027978 MS.gene027345:CDS
GTGGCACCTGAAGTTATATT+AGG 0.227326 7.4:+50027960 MS.gene027345:CDS
TGACTCAATGATTCAAATTT+CGG 0.238923 7.4:-50027855 None:intergenic
TTGGAGTATCTACACAATTT+AGG 0.242514 7.4:+50027615 MS.gene027345:CDS
ATATCAACTCGGTTTGTAAA+AGG 0.283970 7.4:+50027883 MS.gene027345:CDS
TGAAACGTTTCCTTCCTATT+TGG 0.287338 7.4:-50028068 None:intergenic
TGTTTCGCCGCCGTGATTCA+TGG 0.360362 7.4:-50026602 None:intergenic
ACTTCATTCTGTGGAATATA+CGG 0.360417 7.4:-50028263 None:intergenic
GATTGAAGTTGATGAAATAA+AGG 0.368422 7.4:+50028184 MS.gene027345:CDS
TTGGATTAAGTTTCTTTGAT+AGG 0.376257 7.4:-50027713 None:intergenic
AACAATGGAGGTTGAACAAA+AGG 0.379746 7.4:+50028100 MS.gene027345:CDS
TGGCACCTGAAGTTATATTA+GGG 0.404506 7.4:+50027961 MS.gene027345:CDS
ATTCTTGTAATTCCTATGTT+GGG 0.407852 7.4:+50027829 MS.gene027345:CDS
GGTGTTGATTGGTGGTCATT+TGG 0.413313 7.4:+50027999 MS.gene027345:CDS
TTCCTATTTGGACTACTAAA+CGG 0.415189 7.4:-50028056 None:intergenic
AAATATCATGATTCAACAAA+CGG 0.426253 7.4:+50027665 MS.gene027345:CDS
ATTGAAGTTGATGAAATAAA+GGG 0.427215 7.4:+50028185 MS.gene027345:CDS
TATTCTTGTAATTCCTATGT+TGG 0.435398 7.4:+50027828 MS.gene027345:CDS
CCATTCCCTAATATAACTTC+AGG 0.445354 7.4:-50027966 None:intergenic
CGCCGTTTAGTAGTCCAAAT+AGG 0.447354 7.4:+50028054 MS.gene027345:CDS
CGCCGTCGGTCGTGGCGCAA+AGG 0.449924 7.4:+50026654 MS.gene027345:CDS
TTGATCATCCTCTCTTGCCT+AGG 0.457608 7.4:+50026827 MS.gene027345:CDS
GCCGTCGGTCGTGGCGCAAA+GGG 0.465289 7.4:+50026655 MS.gene027345:CDS
AATGAAGTTGAGGACAAACC+TGG 0.466922 7.4:+50028278 MS.gene027345:CDS
GATGTTGAGTCCTTTGTACA+TGG 0.475322 7.4:+50028314 MS.gene027345:CDS
GAATCACGGCGGCGAAACAT+TGG 0.475611 7.4:+50026606 MS.gene027345:CDS
GTTGAGTCAGACTCAAACTA+AGG 0.480419 7.4:+50028463 MS.gene027345:CDS
TTTGCTATTGATTATTGTCA+TGG 0.483556 7.4:+50026886 MS.gene027345:CDS
GGGTGAATCAACACCGTTGA+AGG 0.484693 7.4:+50028121 MS.gene027345:CDS
TGAAAAGCTCCTTTAAACCT+AGG 0.487325 7.4:-50026844 None:intergenic
ATCAACTTCAATCCTACGAT+CGG 0.496191 7.4:-50028174 None:intergenic
GAAAGAATGGTGAATGCAAA+AGG 0.496992 7.4:+50026773 MS.gene027345:CDS
AATATCATGATTCAACAAAC+GGG 0.499507 7.4:+50027666 MS.gene027345:CDS
TTGTCCTCAACTTCATTCTG+TGG 0.505759 7.4:-50028272 None:intergenic
ACCCTTTGCGCCACGACCGA+CGG 0.506004 7.4:-50026656 None:intergenic
TAAAGGTGTGAAGTGGAATA+CGG 0.506683 7.4:+50028220 MS.gene027345:CDS
TTGAGTTCCAACTCGTCACC+AGG 0.507046 7.4:+50027750 MS.gene027345:CDS
GAGTTGGAACTCAATGAGTT+TGG 0.516698 7.4:-50027741 None:intergenic
AATTCTCTGAAGAAACCATC+AGG 0.520550 7.4:+50026950 MS.gene027345:CDS
TTTGGTGGTGAGTTGGAACC+TGG 0.523219 7.4:-50027768 None:intergenic
GAATGAGAAGGAGAAGGAGA+AGG 0.528547 7.4:+50028406 MS.gene027345:CDS
AAATTTCGGTTTCCCAACAT+AGG 0.528638 7.4:-50027841 None:intergenic
AGAGGGGAATGAGAAGGAGA+AGG 0.537837 7.4:+50028400 MS.gene027345:CDS
ATGATAATAATAAGAATGTG+TGG 0.538450 7.4:+50028432 MS.gene027345:CDS
GTGTTTCTTTCAAGAACCTA+CGG 0.544643 7.4:+50026682 MS.gene027345:CDS
TGAAAAGTCAAACTCGTTCG+TGG 0.546520 7.4:+50027923 MS.gene027345:CDS
CCTTTAAACCTAGGCAAGAG+AGG 0.548188 7.4:-50026835 None:intergenic
ATTTCTTTAAAGGTGTGAAG+TGG 0.552950 7.4:+50028213 MS.gene027345:CDS
TCAACTTCAATCCTACGATC+GGG 0.554072 7.4:-50028173 None:intergenic
CCTGAAGTTATATTAGGGAA+TGG 0.555674 7.4:+50027966 MS.gene027345:CDS
CTATTGATTATTGTCATGGT+GGG 0.561164 7.4:+50026890 MS.gene027345:CDS
ATCATCGAAAGAAGAATGGT+TGG 0.568810 7.4:+50026705 MS.gene027345:CDS
AAAAGAAGAGGGGAATGAGA+AGG 0.572565 7.4:+50028394 MS.gene027345:CDS
TTCTTCTTTCGATGATCCGT+AGG 0.576905 7.4:-50026698 None:intergenic
ACAATGGAGGTTGAACAAAA+GGG 0.583595 7.4:+50028101 MS.gene027345:CDS
TGTGAAGTGGAATACGGTGT+TGG 0.584499 7.4:+50028226 MS.gene027345:CDS
AGTTTATAGAGATTTGAAGC+CGG 0.590893 7.4:+50027641 MS.gene027345:CDS
ACGGATCATCGAAAGAAGAA+TGG 0.592361 7.4:+50026701 MS.gene027345:CDS
TTTGCAATCAAGTCCTTCAA+CGG 0.604524 7.4:-50028134 None:intergenic
GAAAAGTCAAACTCGTTCGT+GGG 0.611855 7.4:+50027924 MS.gene027345:CDS
CTTACCTCTGCCATGAATCA+CGG 0.612014 7.4:+50026592 None:intergenic
AGTGGAATTGGTGTTAGCAT+TGG 0.614201 7.4:+50027596 MS.gene027345:CDS
GTTTAGTAGTCCAAATAGGA+AGG 0.623212 7.4:+50028058 MS.gene027345:CDS
ATGTTGAGTCCTTTGTACAT+GGG 0.629402 7.4:+50028315 MS.gene027345:CDS
GTTGGAACCTGGTGACGAGT+TGG 0.630791 7.4:-50027757 None:intergenic
GAGTCAAATTGATATCAACT+CGG 0.631076 7.4:+50027872 MS.gene027345:CDS
TATTCCACAGAATGAAGTTG+AGG 0.632677 7.4:+50028268 MS.gene027345:CDS
CGTGGGAACTGAGGATTACG+TGG 0.637947 7.4:+50027941 MS.gene027345:CDS
CTTTGCGCCACGACCGACGG+CGG 0.638099 7.4:-50026653 None:intergenic
AAAGAATGGTGAATGCAAAA+GGG 0.638261 7.4:+50026774 MS.gene027345:CDS
GCTATTGATTATTGTCATGG+TGG 0.639438 7.4:+50026889 MS.gene027345:CDS
TTGAGAAAGATCCCGATCGT+AGG 0.641636 7.4:+50028162 MS.gene027345:CDS
AAACTCGTTCGTGGGAACTG+AGG 0.645067 7.4:+50027932 MS.gene027345:CDS
ATGAAGTTGAGGACAAACCT+GGG 0.646470 7.4:+50028279 MS.gene027345:CDS
TGATAATAATAAGAATGTGT+GGG 0.668196 7.4:+50028433 MS.gene027345:CDS
TCATTCTGTGGAATATACGG+TGG 0.687121 7.4:-50028260 None:intergenic
ACCTCTGCCATGAATCACGG+CGG 0.774611 7.4:+50026595 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATATTTAAAATTTACAAAAC+TGG - chr7.4:50027024-50027043 None:intergenic 10.0%
!!! TATTTAAAATTTACAAAACT+GGG - chr7.4:50027023-50027042 None:intergenic 10.0%
!!! AATGTTGAAAAACAATTTTT+TGG + chr7.4:50027378-50027397 MS.gene027345:intron 15.0%
!! AAATATCATGATTCAACAAA+CGG + chr7.4:50027665-50027684 MS.gene027345:CDS 20.0%
!! ATGATAATAATAAGAATGTG+TGG + chr7.4:50028432-50028451 MS.gene027345:CDS 20.0%
!! TGATAATAATAAGAATGTGT+GGG + chr7.4:50028433-50028452 MS.gene027345:CDS 20.0%
!!! AAAATTTTCAGTCATTTTCT+TGG + chr7.4:50027506-50027525 MS.gene027345:intron 20.0%
!!! AAACAATTTTTTGGATTTTG+TGG + chr7.4:50027387-50027406 MS.gene027345:intron 20.0%
!!! ATTGAAGTTGATGAAATAAA+GGG + chr7.4:50028185-50028204 MS.gene027345:CDS 20.0%
!!! CACTCTTATTTTTATTCTTT+GGG - chr7.4:50028349-50028368 None:intergenic 20.0%
!!! TCACTCTTATTTTTATTCTT+TGG - chr7.4:50028350-50028369 None:intergenic 20.0%
!!! TGTTAATTTTTCTTTTGTGA+AGG + chr7.4:50027565-50027584 MS.gene027345:intron 20.0%
!!! TTATACAAAATTTTGTTGTG+TGG + chr7.4:50027255-50027274 MS.gene027345:intron 20.0%
!!! TTATGAAATATTTTACCTGA+TGG - chr7.4:50026968-50026987 None:intergenic 20.0%
! AATATCATGATTCAACAAAC+GGG + chr7.4:50027666-50027685 MS.gene027345:CDS 25.0%
! AATGAGGTAAAAAAAGAAGA+GGG + chr7.4:50028383-50028402 MS.gene027345:CDS 25.0%
! ATTCTTGTAATTCCTATGTT+GGG + chr7.4:50027829-50027848 MS.gene027345:CDS 25.0%
! GAAGATTGATATGAACAATT+AGG - chr7.4:50027186-50027205 None:intergenic 25.0%
! TAATGAGGTAAAAAAAGAAG+AGG + chr7.4:50028382-50028401 MS.gene027345:CDS 25.0%
! TATTATAGCGTAATTTGATC+AGG + chr7.4:50027058-50027077 MS.gene027345:intron 25.0%
! TATTCTTGTAATTCCTATGT+TGG + chr7.4:50027828-50027847 MS.gene027345:CDS 25.0%
! TGACTCAATGATTCAAATTT+CGG - chr7.4:50027858-50027877 None:intergenic 25.0%
! TGAGAAAGAGAAAAATAATG+AGG + chr7.4:50028367-50028386 MS.gene027345:CDS 25.0%
! TTGGATTAAGTTTCTTTGAT+AGG - chr7.4:50027716-50027735 None:intergenic 25.0%
! TTTCAAACTGAAAAGCTTAT+TGG + chr7.4:50026862-50026881 MS.gene027345:CDS 25.0%
!! AGGAAAAATAATGGAAAGAA+TGG + chr7.4:50026760-50026779 MS.gene027345:CDS 25.0%
!! TGTTGAATCATGATATTTTC+CGG - chr7.4:50027663-50027682 None:intergenic 25.0%
!!! CGGATAAAATTTTAAGGTTT+CGG - chr7.4:50026636-50026655 None:intergenic 25.0%
!!! CTTCTTTTGAGGAAAAATAA+TGG + chr7.4:50026751-50026770 MS.gene027345:CDS 25.0%
!!! GATTGAAGTTGATGAAATAA+AGG + chr7.4:50028184-50028203 MS.gene027345:CDS 25.0%
!!! GTTTCACAAGATTTTAACAA+TGG + chr7.4:50028085-50028104 MS.gene027345:CDS 25.0%
!!! GTTTTGTATGAGTTGTTTTA+TGG + chr7.4:50028026-50028045 MS.gene027345:CDS 25.0%
!!! TTCCTTCTGTTTTTTGTATT+TGG - chr7.4:50027789-50027808 None:intergenic 25.0%
!!! TTTGCTATTGATTATTGTCA+TGG + chr7.4:50026886-50026905 MS.gene027345:CDS 25.0%
AAAGAATGGTGAATGCAAAA+GGG + chr7.4:50026774-50026793 MS.gene027345:CDS 30.0%
AACAATCATGATTTGAGAGA+TGG + chr7.4:50027442-50027461 MS.gene027345:intron 30.0%
AAGGGTCATGATTTCTTTAA+AGG + chr7.4:50028203-50028222 MS.gene027345:CDS 30.0%
ACTTCATTCTGTGGAATATA+CGG - chr7.4:50028266-50028285 None:intergenic 30.0%
ATGAGGTAAAAAAAGAAGAG+GGG + chr7.4:50028384-50028403 MS.gene027345:CDS 30.0%
CACCAAATACAAAAAACAGA+AGG + chr7.4:50027784-50027803 MS.gene027345:CDS 30.0%
GAAAAATATCCCATGTACAA+AGG - chr7.4:50028327-50028346 None:intergenic 30.0%
GAGTCAAATTGATATCAACT+CGG + chr7.4:50027872-50027891 MS.gene027345:CDS 30.0%
TTCCTATTTGGACTACTAAA+CGG - chr7.4:50028059-50028078 None:intergenic 30.0%
! AAATCTTTTTCCAAGTGGAT+CGG - chr7.4:50027087-50027106 None:intergenic 30.0%
! AGTTTATAGAGATTTGAAGC+CGG + chr7.4:50027641-50027660 MS.gene027345:CDS 30.0%
! ATATCAACTCGGTTTGTAAA+AGG + chr7.4:50027883-50027902 MS.gene027345:CDS 30.0%
! ATTTCTTTAAAGGTGTGAAG+TGG + chr7.4:50028213-50028232 MS.gene027345:CDS 30.0%
! CTATTGATTATTGTCATGGT+GGG + chr7.4:50026890-50026909 MS.gene027345:CDS 30.0%
! TATCTAAAGAGCTTCTTTTG+AGG + chr7.4:50026740-50026759 MS.gene027345:CDS 30.0%
! TTAGGGAATGGACATAATTT+TGG + chr7.4:50027978-50027997 MS.gene027345:CDS 30.0%
! TTGGAGTATCTACACAATTT+AGG + chr7.4:50027615-50027634 MS.gene027345:CDS 30.0%
!! TCACAAGATTTTAACAATGG+AGG + chr7.4:50028088-50028107 MS.gene027345:CDS 30.0%
!!! ATAATTTTGGTGTTGATTGG+TGG + chr7.4:50027991-50028010 MS.gene027345:CDS 30.0%
!!! CTTCTGTTTTTTGTATTTGG+TGG - chr7.4:50027786-50027805 None:intergenic 30.0%
!!! GACATAATTTTGGTGTTGAT+TGG + chr7.4:50027988-50028007 MS.gene027345:CDS 30.0%
!!! TCTTCAGAGAATTTTTTCTC+AGG - chr7.4:50026943-50026962 None:intergenic 30.0%
AAATTTCGGTTTCCCAACAT+AGG - chr7.4:50027844-50027863 None:intergenic 35.0%
AACAATGGAGGTTGAACAAA+AGG + chr7.4:50028100-50028119 MS.gene027345:CDS 35.0%
ACAATGGAGGTTGAACAAAA+GGG + chr7.4:50028101-50028120 MS.gene027345:CDS 35.0%
ATCAACTTCAATCCTACGAT+CGG - chr7.4:50028177-50028196 None:intergenic 35.0%
ATCATCGAAAGAAGAATGGT+TGG + chr7.4:50026705-50026724 MS.gene027345:CDS 35.0%
ATGTTGAGTCCTTTGTACAT+GGG + chr7.4:50028315-50028334 MS.gene027345:CDS 35.0%
CAAAAAACAGAAGGAAGAGA+TGG + chr7.4:50027793-50027812 MS.gene027345:CDS 35.0%
CCATTCCCTAATATAACTTC+AGG - chr7.4:50027969-50027988 None:intergenic 35.0%
CCTGAAGTTATATTAGGGAA+TGG + chr7.4:50027966-50027985 MS.gene027345:CDS 35.0%
GAAAGAATGGTGAATGCAAA+AGG + chr7.4:50026773-50026792 MS.gene027345:CDS 35.0%
GTGTTTCTTTCAAGAACCTA+CGG + chr7.4:50026682-50026701 MS.gene027345:CDS 35.0%
GTTTAGTAGTCCAAATAGGA+AGG + chr7.4:50028058-50028077 MS.gene027345:CDS 35.0%
TATTCCACAGAATGAAGTTG+AGG + chr7.4:50028268-50028287 MS.gene027345:CDS 35.0%
TGAAAAGCTCCTTTAAACCT+AGG - chr7.4:50026847-50026866 None:intergenic 35.0%
TGAAACGTTTCCTTCCTATT+TGG - chr7.4:50028071-50028090 None:intergenic 35.0%
TGACATTAGGGAATCAAACT+AGG - chr7.4:50027219-50027238 None:intergenic 35.0%
TGATTCCCTAATGTCAATTC+AGG + chr7.4:50027223-50027242 MS.gene027345:intron 35.0%
TGGCACCTGAAGTTATATTA+GGG + chr7.4:50027961-50027980 MS.gene027345:CDS 35.0%
TTTGCAATCAAGTCCTTCAA+CGG - chr7.4:50028137-50028156 None:intergenic 35.0%
! AATTCTCTGAAGAAACCATC+AGG + chr7.4:50026950-50026969 MS.gene027345:CDS 35.0%
! CAGCAAAATCTTTTTCCAAG+TGG - chr7.4:50027092-50027111 None:intergenic 35.0%
! CTTAAAATTTTATCCGCCGT+CGG + chr7.4:50026640-50026659 MS.gene027345:CDS 35.0%
! GCTATTGATTATTGTCATGG+TGG + chr7.4:50026889-50026908 MS.gene027345:CDS 35.0%
! TAAAGGTGTGAAGTGGAATA+CGG + chr7.4:50028220-50028239 MS.gene027345:CDS 35.0%
!! AAGGTTTTATGCAGTGGAAT+TGG + chr7.4:50027584-50027603 MS.gene027345:intron 35.0%
!! CTCAATGAGTTTGGTGATTT+TGG - chr7.4:50027735-50027754 None:intergenic 35.0%
!! CTCATCGATTTGTTAGTTTC+TGG + chr7.4:50027307-50027326 MS.gene027345:intron 35.0%
!! TTTGTGAAGGTTTTATGCAG+TGG + chr7.4:50027578-50027597 MS.gene027345:intron 35.0%
!!! TTTTGTATTTGGTGGTGAGT+TGG - chr7.4:50027778-50027797 None:intergenic 35.0%
AAAAGAAGAGGGGAATGAGA+AGG + chr7.4:50028394-50028413 MS.gene027345:CDS 40.0%
AACCCACCTGAATTGACATT+AGG - chr7.4:50027232-50027251 None:intergenic 40.0%
AATGAAGTTGAGGACAAACC+TGG + chr7.4:50028278-50028297 MS.gene027345:CDS 40.0%
ACCCACCTGAATTGACATTA+GGG - chr7.4:50027231-50027250 None:intergenic 40.0%
ACGGATCATCGAAAGAAGAA+TGG + chr7.4:50026701-50026720 MS.gene027345:CDS 40.0%
ATGAAGTTGAGGACAAACCT+GGG + chr7.4:50028279-50028298 MS.gene027345:CDS 40.0%
GAAAAGTCAAACTCGTTCGT+GGG + chr7.4:50027924-50027943 MS.gene027345:CDS 40.0%
GAGTTGGAACTCAATGAGTT+TGG - chr7.4:50027744-50027763 None:intergenic 40.0%
GATGTTGAGTCCTTTGTACA+TGG + chr7.4:50028314-50028333 MS.gene027345:CDS 40.0%
GTGGCACCTGAAGTTATATT+AGG + chr7.4:50027960-50027979 MS.gene027345:CDS 40.0%
GTTGAGTCAGACTCAAACTA+AGG + chr7.4:50028463-50028482 MS.gene027345:CDS 40.0%
TCAACTTCAATCCTACGATC+GGG - chr7.4:50028176-50028195 None:intergenic 40.0%
TCATTCTGTGGAATATACGG+TGG - chr7.4:50028263-50028282 None:intergenic 40.0%
TCCCTAATGTCAATTCAGGT+GGG + chr7.4:50027227-50027246 MS.gene027345:intron 40.0%
TGAAAAGTCAAACTCGTTCG+TGG + chr7.4:50027923-50027942 MS.gene027345:CDS 40.0%
TTCCCTAATGTCAATTCAGG+TGG + chr7.4:50027226-50027245 MS.gene027345:intron 40.0%
TTCTTCTTTCGATGATCCGT+AGG - chr7.4:50026701-50026720 None:intergenic 40.0%
TTGTCCTCAACTTCATTCTG+TGG - chr7.4:50028275-50028294 None:intergenic 40.0%
! ACATCTTTTCTCGAAAACCC+AGG - chr7.4:50028299-50028318 None:intergenic 40.0%
! CGACGGCGGATAAAATTTTA+AGG - chr7.4:50026642-50026661 None:intergenic 40.0%
!! AGTGGAATTGGTGTTAGCAT+TGG + chr7.4:50027596-50027615 MS.gene027345:CDS 40.0%
CCTCTCTTGCCTAGGTTTAA+AGG + chr7.4:50026835-50026854 MS.gene027345:CDS 45.0%
CCTTTAAACCTAGGCAAGAG+AGG - chr7.4:50026838-50026857 None:intergenic 45.0%
CGCCGTTTAGTAGTCCAAAT+AGG + chr7.4:50028054-50028073 MS.gene027345:CDS 45.0%
GAATGAGAAGGAGAAGGAGA+AGG + chr7.4:50028406-50028425 MS.gene027345:CDS 45.0%
TGTGAAGTGGAATACGGTGT+TGG + chr7.4:50028226-50028245 MS.gene027345:CDS 45.0%
TTGAGAAAGATCCCGATCGT+AGG + chr7.4:50028162-50028181 MS.gene027345:CDS 45.0%
TTGATCATCCTCTCTTGCCT+AGG + chr7.4:50026827-50026846 MS.gene027345:CDS 45.0%
!! GGTGTTGATTGGTGGTCATT+TGG + chr7.4:50027999-50028018 MS.gene027345:CDS 45.0%
AAACTCGTTCGTGGGAACTG+AGG + chr7.4:50027932-50027951 MS.gene027345:CDS 50.0%
AGAGGGGAATGAGAAGGAGA+AGG + chr7.4:50028400-50028419 MS.gene027345:CDS 50.0%
CTAATGCCACCATGCACTTC+AGG - chr7.4:50027286-50027305 None:intergenic 50.0%
GATCAACCTGAAGTGCATGG+TGG + chr7.4:50027277-50027296 MS.gene027345:intron 50.0%
GGGTGAATCAACACCGTTGA+AGG + chr7.4:50028121-50028140 MS.gene027345:CDS 50.0%
GTGGATCAACCTGAAGTGCA+TGG + chr7.4:50027274-50027293 MS.gene027345:intron 50.0%
TTGAGTTCCAACTCGTCACC+AGG + chr7.4:50027750-50027769 MS.gene027345:CDS 50.0%
!! TTTGGTGGTGAGTTGGAACC+TGG - chr7.4:50027771-50027790 None:intergenic 50.0%
CGTGGGAACTGAGGATTACG+TGG + chr7.4:50027941-50027960 MS.gene027345:CDS 55.0%
GAATCACGGCGGCGAAACAT+TGG + chr7.4:50026606-50026625 MS.gene027345:CDS 55.0%
GATCAGGTAGCCGATCCACT+TGG + chr7.4:50027074-50027093 MS.gene027345:intron 55.0%
! ATTTTATCCGCCGTCGGTCG+TGG + chr7.4:50026646-50026665 MS.gene027345:CDS 55.0%
! GTTGGAACCTGGTGACGAGT+TGG - chr7.4:50027760-50027779 None:intergenic 55.0%
ACCCTTTGCGCCACGACCGA+CGG - chr7.4:50026659-50026678 None:intergenic 65.0%
CTTTGCGCCACGACCGACGG+CGG - chr7.4:50026656-50026675 None:intergenic 70.0%
GCCGTCGGTCGTGGCGCAAA+GGG + chr7.4:50026655-50026674 MS.gene027345:CDS 70.0%
CGCCGTCGGTCGTGGCGCAA+AGG + chr7.4:50026654-50026673 MS.gene027345:CDS 75.0%


Chromosome Type Strat End Strand Name
chr7.4 gene 50026604 50028508 50026604 ID=MS.gene027345
chr7.4 mRNA 50026604 50028508 50026604 ID=MS.gene027345.t1;Parent=MS.gene027345
chr7.4 exon 50026604 50026971 50026604 ID=MS.gene027345.t1.exon1;Parent=MS.gene027345.t1
chr7.4 CDS 50026604 50026971 50026604 ID=cds.MS.gene027345.t1;Parent=MS.gene027345.t1
chr7.4 exon 50027587 50028508 50027587 ID=MS.gene027345.t1.exon2;Parent=MS.gene027345.t1
chr7.4 CDS 50027587 50028508 50027587 ID=cds.MS.gene027345.t1;Parent=MS.gene027345.t1
Gene Sequence

>MS.gene027345

ATGAATCACGGCGGCGAAACATTGGACTTCCGAAACCTTAAAATTTTATCCGCCGTCGGTCGTGGCGCAAAGGGTGTCGTGTTTCTTTCAAGAACCTACGGATCATCGAAAGAAGAATGGTTGGCATTGAAAGTGATATCTAAAGAGCTTCTTTTGAGGAAAAATAATGGAAAGAATGGTGAATGCAAAAGGGTGAAATTTGAACAACAAATACTACGTCGTTTTGATCATCCTCTCTTGCCTAGGTTTAAAGGAGCTTTTCAAACTGAAAAGCTTATTGGATTTGCTATTGATTATTGTCATGGTGGGAATTTGCATTCTCTTAGAAAGAAACAGCCTGAGAAAAAATTCTCTGAAGAAACCATCAGGTAAAATATTTCATAATGAAAAAACAACATTGTGTTTCTTTTTTTTTTCCCAGTTTTGTAAATTTTAAATATGATGTATGATAGAATATTATAGCGTAATTTGATCAGGTAGCCGATCCACTTGGAAAAAGATTTTGCTGTTGTTGTTCTGTTACATTTTAATACGTTTTCTGTAATATGTAATTACAATGAGTCTAGAAGATGATTATTGCCTAATTGTTCATATCAATCTTCTAGATTTAATCCTAGTTTGATTCCCTAATGTCAATTCAGGTGGGTTAGTTTATACAAAATTTTGTTGTGTGGATCAACCTGAAGTGCATGGTGGCATTAGACTCATCGATTTGTTAGTTTCTGGATTCGAGAAATTTTTAATTTATTTTTGTCATGCATTGCAAATTGTTCAAATGTTGAAAAACAATTTTTTGGATTTTGTGGTTTAGTTAATTCAATAGATTTTTGCAATATATAACAATCATGATTTGAGAGATGGATTAAGTTTAAATTTTGATTATTTATTTGAGAAGAAATTTCAAAATTTTCAGTCATTTTCTTGGTAACAATGAAGAATTTTGTGTTTAATTTAACGTGATTGTTAATTTTTCTTTTGTGAAGGTTTTATGCAGTGGAATTGGTGTTAGCATTGGAGTATCTACACAATTTAGGAGTAGTTTATAGAGATTTGAAGCCGGAAAATATCATGATTCAACAAACGGGTCACATAATGATCGTAGATTTCGACCTATCAAAGAAACTTAATCCAAAATCACCAAACTCATTGAGTTCCAACTCGTCACCAGGTTCCAACTCACCACCAAATACAAAAAACAGAAGGAAGAGATGGTTATCAAAGTTCTATTCTTGTAATTCCTATGTTGGGAAACCGAAATTTGAATCATTGAGTCAAATTGATATCAACTCGGTTTGTAAAAGGAGTGAGTCAGACTCAGTTGAAAAGTCAAACTCGTTCGTGGGAACTGAGGATTACGTGGCACCTGAAGTTATATTAGGGAATGGACATAATTTTGGTGTTGATTGGTGGTCATTTGGCGTCGTTTTGTATGAGTTGTTTTATGGAACGACGCCGTTTAGTAGTCCAAATAGGAAGGAAACGTTTCACAAGATTTTAACAATGGAGGTTGAACAAAAGGGTGAATCAACACCGTTGAAGGACTTGATTGCAAAGTTGCTTGAGAAAGATCCCGATCGTAGGATTGAAGTTGATGAAATAAAGGGTCATGATTTCTTTAAAGGTGTGAAGTGGAATACGGTGTTGGATATTGTGCGTCCACCGTATATTCCACAGAATGAAGTTGAGGACAAACCTGGGTTTTCGAGAAAAGATGTTGAGTCCTTTGTACATGGGATATTTTTCCCAAAGAATAAAAATAAGAGTGAGAAAGAGAAAAATAATGAGGTAAAAAAAGAAGAGGGGAATGAGAAGGAGAAGGAGAAGGAGAATGATAATAATAAGAATGTGTGGGTTGAGAAGTTGAGTCAGACTCAAACTAAGGATGAAAATTTTTTGATTTTTTGA
Protein sequence

>MS.gene027345.t1

MNHGGETLDFRNLKILSAVGRGAKGVVFLSRTYGSSKEEWLALKVISKELLLRKNNGKNGECKRVKFEQQILRRFDHPLLPRFKGAFQTEKLIGFAIDYCHGGNLHSLRKKQPEKKFSEETIRFYAVELVLALEYLHNLGVVYRDLKPENIMIQQTGHIMIVDFDLSKKLNPKSPNSLSSNSSPGSNSPPNTKNRRKRWLSKFYSCNSYVGKPKFESLSQIDINSVCKRSESDSVEKSNSFVGTEDYVAPEVILGNGHNFGVDWWSFGVVLYELFYGTTPFSSPNRKETFHKILTMEVEQKGESTPLKDLIAKLLEKDPDRRIEVDEIKGHDFFKGVKWNTVLDIVRPPYIPQNEVEDKPGFSRKDVESFVHGIFFPKNKNKSEKEKNNEVKKEEGNEKEKEKENDNNKNVWVEKLSQTQTKDENFLIF