AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene02774

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02774.t1 MTR_8g043650 88.608 237 27 0 1 237 1 237 3.76e-158 438
MS.gene02774.t1 MTR_1g105910 88.608 237 27 0 1 237 1 237 1.91e-150 418
MS.gene02774.t1 MTR_1g105920 90.868 219 20 0 1 219 1 219 2.00e-150 418
MS.gene02774.t1 MTR_2g030740 90.295 237 23 0 1 237 1 237 1.13e-149 416
MS.gene02774.t1 MTR_1g012570 88.186 237 28 0 1 237 1 237 2.46e-144 403
MS.gene02774.t1 MTR_3g052920 86.301 219 30 0 1 219 1 219 4.17e-143 400
MS.gene02774.t1 MTR_1g105905 82.273 220 39 0 18 237 1 220 2.61e-135 379
MS.gene02774.t1 MTR_3g052870 81.279 219 22 1 1 219 1 200 4.92e-127 358
MS.gene02774.t1 MTR_3g030770 74.894 235 41 3 1 225 1 227 2.33e-123 349
MS.gene02774.t1 MTR_1g108510 74.894 235 41 3 1 225 1 227 9.15e-123 348
MS.gene02774.t1 MTR_0121s0080 71.730 237 66 1 1 237 1 236 2.31e-122 347
MS.gene02774.t1 MTR_1g077360 71.556 225 64 0 1 225 1 225 2.63e-120 342
MS.gene02774.t1 MTR_2g093190 74.043 235 43 3 1 225 1 227 2.85e-120 342
MS.gene02774.t1 MTR_5g055100 67.089 237 78 0 1 237 1 237 3.94e-120 342
MS.gene02774.t1 MTR_2g085280 67.373 236 77 0 1 236 1 236 1.01e-119 340
MS.gene02774.t1 MTR_2g085250 67.373 236 77 0 1 236 1 236 3.02e-119 339
MS.gene02774.t1 MTR_1g075600 71.556 225 64 0 1 225 1 225 3.02e-119 339
MS.gene02774.t1 MTR_1g106070 89.011 182 20 0 1 182 1 182 5.92e-119 337
MS.gene02774.t1 MTR_5g045560 70.886 237 69 0 1 237 1 237 6.40e-117 333
MS.gene02774.t1 MTR_1g108580 71.915 235 48 3 1 225 1 227 1.25e-116 332
MS.gene02774.t1 MTR_5g053390 68.889 225 70 0 1 225 1 225 1.81e-113 325
MS.gene02774.t1 MTR_7g062350 66.368 223 73 2 16 237 27 248 1.16e-101 295
MS.gene02774.t1 MTR_1g075570 65.169 178 48 1 18 195 1 164 8.69e-72 216
MS.gene02774.t1 MTR_0121s0100 76.562 128 30 0 1 128 1 128 1.43e-66 202
MS.gene02774.t1 MTR_3g080940 53.514 185 76 1 7 191 7 181 7.93e-66 203
MS.gene02774.t1 MTR_3g030780 74.419 129 33 0 1 129 1 129 5.09e-64 196
MS.gene02774.t1 MTR_3g067910 68.627 102 32 0 21 122 2 103 4.94e-46 149
MS.gene02774.t1 MTR_2g105290 40.351 171 92 2 5 172 8 171 5.93e-42 141
MS.gene02774.t1 MTR_8g086290 40.964 166 88 2 5 167 8 166 5.90e-40 135
MS.gene02774.t1 MTR_7g028448 44.516 155 74 3 5 159 8 150 7.76e-35 122
MS.gene02774.t1 MTR_4g036915 44.516 155 74 3 5 159 8 150 7.76e-35 122
MS.gene02774.t1 MTR_4g127140 38.043 184 94 4 5 175 8 184 4.85e-32 115
MS.gene02774.t1 MTR_1g108500 57.522 113 25 2 8 118 94 185 1.92e-30 115
MS.gene02774.t1 MTR_3g067875 83.929 56 9 0 18 73 1 56 1.81e-27 100
MS.gene02774.t1 MTR_3g067915 65.672 67 23 0 60 126 30 96 1.11e-24 94.0
MS.gene02774.t1 MTR_8g051580 45.238 126 64 4 9 131 2 125 1.53e-24 96.3
MS.gene02774.t1 MTR_1g047550 62.319 69 26 0 9 77 2 70 1.60e-24 96.3
MS.gene02774.t1 MTR_8g079502 62.319 69 26 0 9 77 2 70 3.80e-24 95.5
MS.gene02774.t1 MTR_8g046350 43.860 114 57 2 9 122 2 108 5.15e-24 94.4
MS.gene02774.t1 MTR_3g067870 70.492 61 18 0 16 76 83 143 1.56e-23 93.2
MS.gene02774.t1 MTR_4g131030 40.517 116 54 2 9 109 2 117 2.32e-23 94.0
MS.gene02774.t1 MTR_1g063160 46.429 112 55 3 9 118 2 110 2.82e-23 92.8
MS.gene02774.t1 MTR_1g054265 55.844 77 34 0 9 85 2 78 4.29e-23 92.0
MS.gene02774.t1 MTR_4g094632 40.708 113 64 2 9 120 2 112 1.05e-20 85.5
MS.gene02774.t1 MTR_3g005530 52.941 68 32 0 9 76 2 69 8.70e-19 82.0
MS.gene02774.t1 MTR_4g094638 41.509 106 61 1 9 113 2 107 1.04e-18 80.9
MS.gene02774.t1 MTR_4g093970 33.333 165 87 3 10 153 29 191 1.14e-18 82.0
MS.gene02774.t1 MTR_3g452380 51.351 74 36 0 3 76 11 84 3.80e-18 80.9
MS.gene02774.t1 MTR_8g033220 27.948 229 125 6 10 220 3 209 4.30e-18 80.5
MS.gene02774.t1 MTR_4g102530 50.685 73 36 0 10 82 3 75 4.54e-18 79.7
MS.gene02774.t1 MTR_8g033220 27.948 229 125 6 10 220 3 209 4.85e-18 80.1
MS.gene02774.t1 MTR_1g053070 49.383 81 41 0 9 89 2 82 6.01e-18 80.5
MS.gene02774.t1 MTR_8g022970 33.544 158 92 3 8 159 17 167 7.94e-18 78.6
MS.gene02774.t1 MTR_5g066180 51.471 68 33 0 9 76 2 69 1.95e-17 78.6
MS.gene02774.t1 MTR_5g032520 28.638 213 128 6 9 201 2 210 1.96e-17 78.6
MS.gene02774.t1 MTR_8g033270 51.471 68 33 0 9 76 2 69 4.07e-17 78.2
MS.gene02774.t1 MTR_8g087860 51.471 68 33 0 9 76 18 85 7.39e-17 77.4
MS.gene02774.t1 MTR_2g017865 29.730 185 101 5 9 167 17 198 7.62e-17 77.8
MS.gene02774.t1 MTR_6g464720 49.275 69 34 1 9 76 2 70 1.82e-16 76.3
MS.gene02774.t1 MTR_1g101970 50.000 68 34 0 9 76 2 69 2.04e-16 75.1
MS.gene02774.t1 MTR_4g109830 47.826 69 35 1 9 76 2 70 2.12e-16 75.9
MS.gene02774.t1 MTR_3g102570 41.346 104 58 3 9 111 2 103 2.55e-16 77.0
MS.gene02774.t1 MTR_7g075870 38.182 110 66 1 10 119 3 110 2.94e-16 75.1
MS.gene02774.t1 MTR_2g009890 48.529 68 35 0 9 76 2 69 5.69e-16 75.5
MS.gene02774.t1 MTR_5g032150 47.059 68 36 0 9 76 2 69 6.88e-16 74.3
MS.gene02774.t1 MTR_0003s0590 51.471 68 33 0 9 76 2 69 7.57e-16 74.7
MS.gene02774.t1 MTR_5g031000 48.529 68 35 0 9 76 2 69 1.06e-15 73.9
MS.gene02774.t1 MTR_5g031000 48.529 68 35 0 9 76 2 69 1.10e-15 73.9
MS.gene02774.t1 MTR_6g015975 49.275 69 34 1 9 76 2 70 1.93e-15 73.6
MS.gene02774.t1 MTR_7g016600 49.275 69 34 1 9 76 2 70 2.17e-15 73.6
MS.gene02774.t1 MTR_8g066260 35.514 107 65 2 9 115 2 104 2.25e-15 73.2
MS.gene02774.t1 MTR_2g461710 55.357 56 25 0 9 64 2 57 2.42e-15 68.6
MS.gene02774.t1 MTR_3g437790 34.266 143 77 4 26 159 30 164 2.49e-15 72.0
MS.gene02774.t1 MTR_5g021270 50.000 70 33 1 9 76 2 71 4.65e-15 72.4
MS.gene02774.t1 MTR_5g021270 50.000 70 33 1 9 76 2 71 4.82e-15 72.0
MS.gene02774.t1 MTR_4g084740 46.053 76 39 2 9 83 2 76 4.97e-15 73.6
MS.gene02774.t1 MTR_5g046790 45.070 71 36 1 9 79 2 69 5.14e-15 71.6
MS.gene02774.t1 MTR_7g016630 28.704 216 134 7 9 207 2 214 5.37e-15 72.4
MS.gene02774.t1 MTR_7g075870 37.838 111 66 2 10 119 3 111 5.59e-15 71.6
MS.gene02774.t1 MTR_5g046870 47.826 69 35 1 9 76 2 70 1.12e-14 68.6
MS.gene02774.t1 MTR_1g038300 47.143 70 35 1 9 76 2 71 1.82e-14 70.5
MS.gene02774.t1 MTR_3g109930 32.857 140 78 3 27 159 20 150 2.13e-14 69.3
MS.gene02774.t1 MTR_3g088615 44.286 70 37 1 9 76 2 71 2.67e-14 69.3
MS.gene02774.t1 MTR_5g066960 49.123 57 29 0 9 65 2 58 4.16e-14 65.5
MS.gene02774.t1 MTR_1g029670 46.970 66 34 1 9 74 2 66 5.04e-14 68.6
MS.gene02774.t1 MTR_4g109810 28.862 246 130 13 9 230 2 226 5.10e-14 69.7
MS.gene02774.t1 MTR_7g075850 45.714 70 36 1 9 76 2 71 8.67e-14 68.9
MS.gene02774.t1 MTR_3g084980 55.357 56 25 0 9 64 2 57 1.07e-13 68.6
MS.gene02774.t1 MTR_8g097090 46.377 69 36 1 9 76 2 70 1.09e-13 68.6
MS.gene02774.t1 MTR_3g113030 47.619 63 33 0 9 71 2 64 1.91e-13 67.8
MS.gene02774.t1 MTR_4g051538 30.288 208 124 6 5 208 5 195 1.79e-12 65.1
MS.gene02774.t1 MTR_4g093030 47.541 61 32 0 9 69 2 62 2.31e-12 63.5
MS.gene02774.t1 MTR_4g108720 28.977 176 103 9 9 172 2 167 5.01e-12 65.1
MS.gene02774.t1 MTR_4g036050 40.000 70 41 1 9 77 2 71 4.04e-11 60.5
MS.gene02774.t1 MTR_4g036050 40.000 70 41 1 9 77 2 71 4.32e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene02774.t1 AT5G60440 55.319 188 77 3 5 189 3 186 4.31e-63 199
MS.gene02774.t1 AT2G24840 49.390 164 72 4 6 163 60 218 6.91e-44 149
MS.gene02774.t1 AT1G65360 39.111 225 126 6 5 225 3 220 4.19e-42 143
MS.gene02774.t1 AT1G01530 43.750 192 96 4 4 192 2 184 7.87e-41 140
MS.gene02774.t1 AT4G36590 46.296 162 81 2 5 160 3 164 1.17e-38 135
MS.gene02774.t1 AT3G04100 34.969 163 100 4 2 159 7 168 6.90e-27 103
MS.gene02774.t1 AT2G34440 36.747 166 93 4 9 169 2 160 9.56e-27 102
MS.gene02774.t1 AT3G66656 42.748 131 70 2 9 134 2 132 3.59e-26 100
MS.gene02774.t1 AT1G72350 34.211 152 67 3 9 160 43 161 1.56e-22 92.4
MS.gene02774.t1 AT4G22950 41.818 110 61 1 10 119 3 109 6.61e-20 84.0
MS.gene02774.t1 AT4G22950 33.333 168 90 3 10 167 3 158 1.31e-19 84.3
MS.gene02774.t1 AT4G22950 33.333 168 90 3 10 167 3 158 1.31e-19 84.3
MS.gene02774.t1 AT4G09960 46.512 86 45 1 9 93 2 87 5.86e-19 82.4
MS.gene02774.t1 AT2G45660 33.929 168 83 6 10 162 3 157 6.15e-19 80.9
MS.gene02774.t1 AT4G09960 46.512 86 45 1 9 93 3 88 7.27e-19 82.4
MS.gene02774.t1 AT4G09960 46.512 86 45 1 9 93 2 87 7.29e-19 82.4
MS.gene02774.t1 AT1G28460 28.655 171 114 3 5 169 4 172 9.35e-19 81.3
MS.gene02774.t1 AT4G09960 46.512 86 45 1 9 93 12 97 1.00e-18 82.4
MS.gene02774.t1 AT1G29962 29.070 172 115 4 5 169 4 175 1.25e-18 80.9
MS.gene02774.t1 AT4G09960 46.512 86 45 1 9 93 28 113 1.47e-18 82.4
MS.gene02774.t1 AT2G45650 52.941 68 32 0 9 76 2 69 1.84e-18 82.0
MS.gene02774.t1 AT2G22540 39.130 138 64 5 9 132 2 133 2.06e-18 81.6
MS.gene02774.t1 AT2G22540 39.130 138 64 5 9 132 2 133 2.06e-18 81.6
MS.gene02774.t1 AT2G45660 33.735 166 82 6 10 160 3 155 2.63e-18 80.9
MS.gene02774.t1 AT4G09960 46.512 86 45 1 9 93 97 182 3.79e-18 82.4
MS.gene02774.t1 AT4G18960 46.154 91 47 2 5 94 15 104 1.86e-17 79.3
MS.gene02774.t1 AT5G51870 53.731 67 31 0 10 76 3 69 2.21e-17 77.4
MS.gene02774.t1 AT5G51870 53.731 67 31 0 10 76 3 69 2.94e-17 77.8
MS.gene02774.t1 AT5G51870 50.000 72 36 0 5 76 21 92 4.38e-17 77.0
MS.gene02774.t1 AT4G24540 33.758 157 69 5 9 156 2 132 5.17e-17 77.4
MS.gene02774.t1 AT5G51870 53.731 67 31 0 10 76 3 69 5.69e-17 77.4
MS.gene02774.t1 AT3G61120 51.471 68 33 0 9 76 2 69 5.94e-17 77.8
MS.gene02774.t1 AT5G10140 50.725 69 33 1 9 76 2 70 6.42e-17 75.9
MS.gene02774.t1 AT5G51870 53.731 67 31 0 10 76 13 79 6.68e-17 77.4
MS.gene02774.t1 AT3G57230 47.059 68 36 0 9 76 2 69 6.89e-17 75.1
MS.gene02774.t1 AT2G42830 47.368 76 40 0 1 76 9 84 7.58e-17 77.4
MS.gene02774.t1 AT5G62165 49.254 67 34 0 10 76 3 69 7.81e-17 73.9
MS.gene02774.t1 AT2G42830 47.368 76 40 0 1 76 9 84 8.14e-17 77.4
MS.gene02774.t1 AT3G58780 50.704 71 35 0 6 76 14 84 8.82e-17 77.4
MS.gene02774.t1 AT3G58780 50.704 71 35 0 6 76 20 90 9.34e-17 77.4
MS.gene02774.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.02e-16 75.1
MS.gene02774.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.02e-16 75.1
MS.gene02774.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.02e-16 75.1
MS.gene02774.t1 AT5G10140 50.725 69 33 1 9 76 2 70 1.03e-16 75.9
MS.gene02774.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.16e-16 74.7
MS.gene02774.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.16e-16 74.7
MS.gene02774.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.16e-16 74.7
MS.gene02774.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.16e-16 74.7
MS.gene02774.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.16e-16 74.7
MS.gene02774.t1 AT5G10140 50.725 69 33 1 9 76 2 70 1.16e-16 75.9
MS.gene02774.t1 AT5G10140 50.725 69 33 1 9 76 2 70 1.18e-16 75.9
MS.gene02774.t1 AT3G58780 50.704 71 35 0 6 76 14 84 1.65e-16 77.0
MS.gene02774.t1 AT4G37940 48.529 68 35 0 9 76 2 69 1.65e-16 76.3
MS.gene02774.t1 AT4G37940 48.529 68 35 0 9 76 2 69 1.69e-16 75.9
MS.gene02774.t1 AT3G57390 50.000 68 34 0 9 76 2 69 1.81e-16 75.9
MS.gene02774.t1 AT4G37940 48.529 68 35 0 9 76 2 69 1.84e-16 74.7
MS.gene02774.t1 AT1G22130 36.190 105 66 1 9 112 2 106 1.86e-16 77.4
MS.gene02774.t1 AT1G17310 53.165 79 35 1 8 86 47 123 2.10e-16 75.5
MS.gene02774.t1 AT1G17310 53.165 79 35 1 8 86 58 134 2.80e-16 75.5
MS.gene02774.t1 AT5G51860 52.239 67 32 0 10 76 3 69 3.16e-16 74.7
MS.gene02774.t1 AT5G13790 51.471 68 33 0 9 76 2 69 3.39e-16 75.9
MS.gene02774.t1 AT5G13790 51.471 68 33 0 9 76 2 69 3.45e-16 75.9
MS.gene02774.t1 AT3G57230 47.059 68 36 0 9 76 2 69 3.70e-16 75.5
MS.gene02774.t1 AT3G57230 47.059 68 36 0 9 76 2 69 3.70e-16 75.5
MS.gene02774.t1 AT5G62165 49.254 67 34 0 10 76 3 69 4.05e-16 74.3
MS.gene02774.t1 AT5G62165 49.254 67 34 0 10 76 3 69 4.05e-16 74.3
MS.gene02774.t1 AT3G57390 50.000 68 34 0 9 76 2 69 4.08e-16 75.5
MS.gene02774.t1 AT5G62165 49.254 67 34 0 10 76 3 69 4.26e-16 74.7
MS.gene02774.t1 AT5G62165 49.254 67 34 0 10 76 3 69 4.26e-16 74.7
MS.gene02774.t1 AT5G62165 49.254 67 34 0 10 76 3 69 4.26e-16 74.7
MS.gene02774.t1 AT1G77980 37.143 105 65 1 9 112 2 106 4.27e-16 76.6
MS.gene02774.t1 AT5G51860 52.239 67 32 0 10 76 3 69 4.42e-16 74.7
MS.gene02774.t1 AT3G54340 37.600 125 67 4 9 122 2 126 4.62e-16 75.1
MS.gene02774.t1 AT4G11880 48.611 72 36 1 10 80 3 74 5.66e-16 73.6
MS.gene02774.t1 AT4G11880 48.611 72 36 1 10 80 3 74 5.66e-16 73.6
MS.gene02774.t1 AT2G22540 38.406 138 60 6 9 132 2 128 5.81e-16 74.7
MS.gene02774.t1 AT2G22630 47.059 68 36 0 9 76 2 69 8.96e-16 74.3
MS.gene02774.t1 AT2G22630 47.059 68 36 0 9 76 2 69 8.96e-16 74.3
MS.gene02774.t1 AT1G69120 40.659 91 51 1 9 99 2 89 9.30e-16 74.3
MS.gene02774.t1 AT4G11880 48.611 72 36 1 10 80 3 74 1.11e-15 73.9
MS.gene02774.t1 AT4G11880 48.611 72 36 1 10 80 3 74 1.11e-15 73.9
MS.gene02774.t1 AT5G60910 49.296 71 33 1 9 79 2 69 1.17e-15 73.9
MS.gene02774.t1 AT3G30260 46.377 69 36 1 9 76 2 70 1.53e-15 73.9
MS.gene02774.t1 AT1G69120 40.659 91 51 1 9 99 2 89 1.90e-15 73.9
MS.gene02774.t1 AT1G26310 47.826 69 35 1 9 76 2 70 1.95e-15 73.6
MS.gene02774.t1 AT1G77950 44.737 76 40 2 9 83 2 76 2.46e-15 73.6
MS.gene02774.t1 AT1G77950 44.737 76 40 2 9 83 2 76 2.46e-15 73.6
MS.gene02774.t1 AT1G77950 44.737 76 40 2 9 83 2 76 2.46e-15 73.6
MS.gene02774.t1 AT1G77950 44.737 76 40 2 9 83 2 76 2.46e-15 73.6
MS.gene02774.t1 AT5G20240 47.143 70 35 1 9 76 2 71 3.03e-15 70.9
MS.gene02774.t1 AT5G20240 47.143 70 35 1 9 76 2 71 5.01e-15 71.6
MS.gene02774.t1 AT5G15800 49.275 69 34 1 9 76 2 70 5.06e-15 72.4
MS.gene02774.t1 AT1G28450 26.437 174 118 4 5 168 4 177 5.52e-15 71.2
MS.gene02774.t1 AT5G23260 44.681 94 44 3 5 90 12 105 6.91e-15 72.4
MS.gene02774.t1 AT5G23260 44.681 94 44 3 5 90 12 105 7.04e-15 72.4
MS.gene02774.t1 AT5G15800 49.275 69 34 1 9 76 2 70 7.54e-15 72.0
MS.gene02774.t1 AT2G14210 46.377 69 36 1 9 76 2 70 7.78e-15 71.6
MS.gene02774.t1 AT5G65050 46.377 69 36 1 9 76 2 70 8.47e-15 70.5
MS.gene02774.t1 AT2G14210 46.377 69 36 1 9 76 2 70 1.01e-14 71.2
MS.gene02774.t1 AT5G23260 44.318 88 43 2 9 90 2 89 1.15e-14 71.2
MS.gene02774.t1 AT5G23260 44.318 88 43 2 9 90 2 89 1.20e-14 71.6
MS.gene02774.t1 AT5G65050 46.377 69 36 1 9 76 2 70 1.54e-14 70.1
MS.gene02774.t1 AT5G65050 46.377 69 36 1 9 76 2 70 1.74e-14 69.7
MS.gene02774.t1 AT5G65050 46.377 69 36 1 9 76 2 70 1.75e-14 70.1
MS.gene02774.t1 AT5G65060 46.377 69 36 1 9 76 2 70 2.53e-14 69.3
MS.gene02774.t1 AT5G65060 46.377 69 36 1 9 76 2 70 2.72e-14 69.3
MS.gene02774.t1 AT3G02310 47.826 69 35 1 9 76 2 70 3.41e-14 69.3
MS.gene02774.t1 AT5G65060 46.377 69 36 1 9 76 2 70 3.49e-14 69.3
MS.gene02774.t1 AT3G58780 52.459 61 29 0 6 66 14 74 3.68e-14 70.1
MS.gene02774.t1 AT1G47760 34.483 116 61 3 9 123 2 103 4.10e-14 68.9
MS.gene02774.t1 AT2G03710 53.571 56 26 0 9 64 2 57 5.37e-14 68.6
MS.gene02774.t1 AT3G58780 52.459 61 29 0 6 66 14 74 5.47e-14 70.1
MS.gene02774.t1 AT3G02310 47.826 69 35 1 9 76 2 70 8.30e-14 68.9
MS.gene02774.t1 AT1G24260 46.377 69 36 1 9 76 2 70 1.35e-13 68.2
MS.gene02774.t1 AT1G24260 46.377 69 36 1 9 76 2 70 1.37e-13 68.6
MS.gene02774.t1 AT2G03710 47.143 70 35 2 9 76 2 71 1.41e-13 68.6
MS.gene02774.t1 AT5G65070 42.029 69 39 1 9 76 2 70 1.45e-13 66.2
MS.gene02774.t1 AT1G24260 46.377 69 36 1 9 76 2 70 1.47e-13 68.6
MS.gene02774.t1 AT2G03710 47.143 70 35 2 9 76 2 71 1.48e-13 68.6
MS.gene02774.t1 AT5G65070 42.029 69 39 1 9 76 2 70 2.89e-13 66.6
MS.gene02774.t1 AT1G71692 44.286 70 38 1 9 77 2 71 3.08e-13 67.0
MS.gene02774.t1 AT5G65070 42.029 69 39 1 9 76 2 70 5.85e-13 66.6
MS.gene02774.t1 AT5G65070 42.029 69 39 1 9 76 2 70 6.25e-13 65.9
MS.gene02774.t1 AT5G65070 47.368 57 30 0 9 65 2 58 2.82e-12 64.7
MS.gene02774.t1 AT5G27130 41.176 85 46 2 2 82 6 90 1.16e-11 63.5
MS.gene02774.t1 AT1G18750 37.333 75 45 1 9 81 2 76 1.43e-11 63.9
MS.gene02774.t1 AT5G65080 42.667 75 40 2 5 76 3 77 1.66e-11 61.6
MS.gene02774.t1 AT1G18750 36.364 77 47 1 9 83 2 78 1.73e-11 63.5
MS.gene02774.t1 AT1G18750 37.333 75 45 1 9 81 2 76 1.77e-11 63.5
MS.gene02774.t1 AT4G37435 40.278 72 42 1 9 79 2 73 2.71e-11 61.2
MS.gene02774.t1 AT5G65080 48.148 54 28 0 9 62 9 62 4.74e-11 60.8
MS.gene02774.t1 AT1G46408 35.294 119 68 4 10 119 5 123 6.13e-11 61.2
MS.gene02774.t1 AT1G69540 32.727 110 66 3 9 117 2 104 7.21e-11 61.6
MS.gene02774.t1 AT5G49420 35.106 94 54 2 5 91 3 96 7.44e-11 61.6
MS.gene02774.t1 AT1G69540 32.727 110 66 3 9 117 2 104 7.71e-11 61.6

Find 64 sgRNAs with CRISPR-Local

Find 76 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TTTGTTTGGCTTCAACAATA+TGG 0.291497 2.3:-59306727 MS.gene02774:CDS
ATGGGCGGAGGAGGTGGATA+TGG 0.308161 2.3:-59306708 MS.gene02774:CDS
ATCTGAGCTTGTGGAGGATT+TGG 0.314155 2.3:+59306792 None:intergenic
TTGTTGCTCATCATGCTAAT+AGG 0.316248 2.3:-59306899 MS.gene02774:CDS
ATTGCATGGTACCATTGTTT+TGG 0.337688 2.3:+59307135 None:intergenic
AGGCGACTGAGACTCAATTT+TGG 0.352324 2.3:-59306998 MS.gene02774:CDS
TGGTGGGCTTGTCCCGTTGA+TGG 0.374570 2.3:-59306978 MS.gene02774:CDS
TGCTAATAGGCTTGTAATCC+AGG 0.391884 2.3:-59306886 MS.gene02774:CDS
AACAATATGGGCGGAGGAGG+TGG 0.400658 2.3:-59306714 MS.gene02774:CDS
TTGTTTGGCTTCAACAATAT+GGG 0.407022 2.3:-59306726 MS.gene02774:CDS
TCTTCTCGATGTCCAATAGT+TGG 0.408255 2.3:+59307051 None:intergenic
AACAAATGCGGTTGCAACAT+TGG 0.409051 2.3:+59306744 None:intergenic
ACAAATGCGGTTGCAACATT+GGG 0.429373 2.3:+59306745 None:intergenic
GTCCCGTTGATGGGATGAAT+AGG 0.432754 2.3:-59306968 MS.gene02774:CDS
TCCCGTTGATGGGATGAATA+GGG 0.437027 2.3:-59306967 MS.gene02774:CDS
ATGTTGCAACCGCATTTGTT+TGG 0.438589 2.3:-59306741 MS.gene02774:CDS
TCTATGACCGTATCAACATT+GGG 0.442152 2.3:+59307182 None:intergenic
CTTCTTGAATAATTCAAGTT+GGG 0.442228 2.3:+59306944 None:intergenic
TGAATTATTCAAGAAGGCTC+TGG 0.442548 2.3:-59306937 MS.gene02774:CDS
GTGGAGGATTTGGTTGATGA+TGG 0.460225 2.3:+59306802 None:intergenic
GACTCAGATCAACCAACTAT+TGG 0.460516 2.3:-59307063 MS.gene02774:CDS
GCCCTATTCATCCCATCAAC+GGG 0.481029 2.3:+59306966 None:intergenic
GGTGGGCTTGTCCCGTTGAT+GGG 0.493797 2.3:-59306977 MS.gene02774:CDS
TTCAACAATATGGGCGGAGG+AGG 0.500330 2.3:-59306717 MS.gene02774:CDS
ATGATGGAGAGGCATGTTAG+AGG 0.501643 2.3:+59306818 None:intergenic
ATCTATGACCGTATCAACAT+TGG 0.506195 2.3:+59307181 None:intergenic
CCTTCTTGAATAATTCAAGT+TGG 0.516494 2.3:+59306943 None:intergenic
TCTCAGTCGCCTTGTGCAAG+TGG 0.520485 2.3:+59307009 None:intergenic
ACAGAGGGTGCAAAGCTCAC+TGG 0.525840 2.3:+59307265 None:intergenic
GGCTTCAACAATATGGGCGG+AGG 0.534065 2.3:-59306720 MS.gene02774:CDS
CCAACTTGAATTATTCAAGA+AGG 0.535705 2.3:-59306943 MS.gene02774:CDS
GGCCCTATTCATCCCATCAA+CGG 0.536262 2.3:+59306965 None:intergenic
GGAGGTGGATATGGACCCTC+CGG 0.542914 2.3:-59306699 MS.gene02774:CDS
AGGCTCGGATCAAAAGAATC+CGG 0.544225 2.3:+59306680 None:intergenic
TGGCCACCCCAATGTTGATA+CGG 0.545005 2.3:-59307189 MS.gene02774:CDS
GATCGCGCACGTTGGCGCTA+CGG 0.547232 2.3:+59307099 None:intergenic
CTTTCTCGAAGCGCCGTAGT+GGG 0.553366 2.3:-59307301 MS.gene02774:CDS
AATGAAAATACCTTCTCTCC+AGG 0.563686 2.3:+59307212 None:intergenic
ACTTTCTCGAAGCGCCGTAG+TGG 0.571963 2.3:-59307302 MS.gene02774:CDS
GATGGAAACATCTGAGCTTG+TGG 0.573604 2.3:+59306783 None:intergenic
AGTGAGCTTTGCACCCTCTG+TGG 0.587031 2.3:-59307263 MS.gene02774:CDS
CTTCAACCATGTCAAGTGGA+AGG 0.599332 2.3:-59307388 None:intergenic
AGCAACATTTGCACCACAGA+GGG 0.601570 2.3:+59307250 None:intergenic
TGTGCTTCAACCATGTCAAG+TGG 0.603608 2.3:-59307392 None:intergenic
AGTATTGAGATCGCGCACGT+TGG 0.603712 2.3:+59307091 None:intergenic
GGGTTTGAGTAGGAGCACCC+TGG 0.605264 2.3:+59306868 None:intergenic
AGATCTGAGCCACTTGCACA+AGG 0.605846 2.3:-59307018 MS.gene02774:CDS
CTTTCTTGAAGAGCCCACTA+CGG 0.610979 2.3:+59307288 None:intergenic
ATTATTCAAGAAGGCTCTGG+AGG 0.616746 2.3:-59306934 MS.gene02774:CDS
GGGTTATGATAAAACTGTGA+TGG 0.616862 2.3:+59306765 None:intergenic
TGGTACCATGCAATTCATTG+AGG 0.638950 2.3:-59307126 MS.gene02774:CDS
CGAGTCCCACCCCAAAACAA+TGG 0.639467 2.3:-59307146 MS.gene02774:CDS
GTGAGCCTCAATGAATTGCA+TGG 0.640763 2.3:+59307121 None:intergenic
GCTAATAGGCTTGTAATCCA+GGG 0.641442 2.3:-59306885 MS.gene02774:CDS
GGATTTGGTTGATGATGGAG+AGG 0.642684 2.3:+59306807 None:intergenic
CTCGGATCAAAAGAATCCGG+AGG 0.648853 2.3:+59306683 None:intergenic
TTTGGCTTCAACAATATGGG+CGG 0.655383 2.3:-59306723 MS.gene02774:CDS
TTGTTGAAGCCAAACAAATG+CGG 0.665432 2.3:+59306732 None:intergenic
TGACCGTATCAACATTGGGG+TGG 0.665619 2.3:+59307186 None:intergenic
TCGGATCAAAAGAATCCGGA+GGG 0.668804 2.3:+59306684 None:intergenic
GGAAACATCTGAGCTTGTGG+AGG 0.688544 2.3:+59306786 None:intergenic
TCAAGTGGAAGGAAAAGCCG+AGG 0.705721 2.3:-59307377 MS.gene02774:CDS
CTATGACCGTATCAACATTG+GGG 0.709949 2.3:+59307183 None:intergenic
GAGCAACATTTGCACCACAG+AGG 0.713006 2.3:+59307249 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTTTTCATTTCAATCTTT+TGG + chr2.3:59306721-59306740 None:intergenic 15.0%
!! CTTCTTGAATAATTCAAGTT+GGG + chr2.3:59307128-59307147 None:intergenic 25.0%
CCAACTTGAATTATTCAAGA+AGG - chr2.3:59307126-59307145 MS.gene02774:CDS 30.0%
CCTTCTTGAATAATTCAAGT+TGG + chr2.3:59307129-59307148 None:intergenic 30.0%
! TTGTTTGGCTTCAACAATAT+GGG - chr2.3:59307343-59307362 MS.gene02774:CDS 30.0%
! TTTGTTTGGCTTCAACAATA+TGG - chr2.3:59307342-59307361 MS.gene02774:CDS 30.0%
AATGAAAATACCTTCTCTCC+AGG + chr2.3:59306860-59306879 None:intergenic 35.0%
ATCTATGACCGTATCAACAT+TGG + chr2.3:59306891-59306910 None:intergenic 35.0%
GAACCGTTTCCAACAAAAAA+CGG + chr2.3:59307229-59307248 None:intergenic 35.0%
GGGTTATGATAAAACTGTGA+TGG + chr2.3:59307307-59307326 None:intergenic 35.0%
GTTTCCAACAAAAAACGGAA+GGG + chr2.3:59307224-59307243 None:intergenic 35.0%
TCTATGACCGTATCAACATT+GGG + chr2.3:59306890-59306909 None:intergenic 35.0%
TGAATTATTCAAGAAGGCTC+TGG - chr2.3:59307132-59307151 MS.gene02774:CDS 35.0%
TTGTTGAAGCCAAACAAATG+CGG + chr2.3:59307340-59307359 None:intergenic 35.0%
TTGTTGCTCATCATGCTAAT+AGG - chr2.3:59307170-59307189 MS.gene02774:CDS 35.0%
! ATTGCATGGTACCATTGTTT+TGG + chr2.3:59306937-59306956 None:intergenic 35.0%
! TTGCATGGTACCATTGTTTT+GGG + chr2.3:59306936-59306955 None:intergenic 35.0%
!!! CTTCCGTTTTTTGTTGGAAA+CGG - chr2.3:59307223-59307242 MS.gene02774:CDS 35.0%
!!! GGAGAGAAGGTATTTTCATT+TGG - chr2.3:59306860-59306879 MS.gene02774:CDS 35.0%
AAAAACGGAAGGGTTTGAGT+AGG + chr2.3:59307214-59307233 None:intergenic 40.0%
AACAAATGCGGTTGCAACAT+TGG + chr2.3:59307328-59307347 None:intergenic 40.0%
ACAAATGCGGTTGCAACATT+GGG + chr2.3:59307327-59307346 None:intergenic 40.0%
ATGTTGCAACCGCATTTGTT+TGG - chr2.3:59307328-59307347 MS.gene02774:CDS 40.0%
CGTTTCCAACAAAAAACGGA+AGG + chr2.3:59307225-59307244 None:intergenic 40.0%
CTATGACCGTATCAACATTG+GGG + chr2.3:59306889-59306908 None:intergenic 40.0%
GACTCAGATCAACCAACTAT+TGG - chr2.3:59307006-59307025 MS.gene02774:CDS 40.0%
GCTAATAGGCTTGTAATCCA+GGG - chr2.3:59307184-59307203 MS.gene02774:CDS 40.0%
TCTTCTCGATGTCCAATAGT+TGG + chr2.3:59307021-59307040 None:intergenic 40.0%
TGCTAATAGGCTTGTAATCC+AGG - chr2.3:59307183-59307202 MS.gene02774:CDS 40.0%
TGGTACCATGCAATTCATTG+AGG - chr2.3:59306943-59306962 MS.gene02774:CDS 40.0%
! ATTATTCAAGAAGGCTCTGG+AGG - chr2.3:59307135-59307154 MS.gene02774:CDS 40.0%
! TTTCAATCTTTTGGCGACCT+CGG + chr2.3:59306712-59306731 None:intergenic 40.0%
! TTTGGCTTCAACAATATGGG+CGG - chr2.3:59307346-59307365 MS.gene02774:CDS 40.0%
!! GACTGAGACTCAATTTTGGT+GGG - chr2.3:59307075-59307094 MS.gene02774:CDS 40.0%
!! TGCATGGTACCATTGTTTTG+GGG + chr2.3:59306935-59306954 None:intergenic 40.0%
!!! CAAACCCTTCCGTTTTTTGT+TGG - chr2.3:59307217-59307236 MS.gene02774:CDS 40.0%
AGCAACATTTGCACCACAGA+GGG + chr2.3:59306822-59306841 None:intergenic 45.0%
ATCTGAGCTTGTGGAGGATT+TGG + chr2.3:59307280-59307299 None:intergenic 45.0%
CTTTCTTGAAGAGCCCACTA+CGG + chr2.3:59306784-59306803 None:intergenic 45.0%
GATGGAAACATCTGAGCTTG+TGG + chr2.3:59307289-59307308 None:intergenic 45.0%
GTGAGCCTCAATGAATTGCA+TGG + chr2.3:59306951-59306970 None:intergenic 45.0%
! AGGCGACTGAGACTCAATTT+TGG - chr2.3:59307071-59307090 MS.gene02774:CDS 45.0%
! ATGATGGAGAGGCATGTTAG+AGG + chr2.3:59307254-59307273 None:intergenic 45.0%
! CGACTGAGACTCAATTTTGG+TGG - chr2.3:59307074-59307093 MS.gene02774:CDS 45.0%
! TCCCGTTGATGGGATGAATA+GGG - chr2.3:59307102-59307121 MS.gene02774:CDS 45.0%
! TGTTTTCTCACCTGGAGAGA+AGG - chr2.3:59306847-59306866 MS.gene02774:CDS 45.0%
!! GGATTTGGTTGATGATGGAG+AGG + chr2.3:59307265-59307284 None:intergenic 45.0%
!! GTGGAGGATTTGGTTGATGA+TGG + chr2.3:59307270-59307289 None:intergenic 45.0%
!!! ATGGTACCATTGTTTTGGGG+TGG + chr2.3:59306932-59306951 None:intergenic 45.0%
!!! TGGTACCATTGTTTTGGGGT+GGG + chr2.3:59306931-59306950 None:intergenic 45.0%
AGATCTGAGCCACTTGCACA+AGG - chr2.3:59307051-59307070 MS.gene02774:CDS 50.0%
GAGCAACATTTGCACCACAG+AGG + chr2.3:59306823-59306842 None:intergenic 50.0%
GCCCTATTCATCCCATCAAC+GGG + chr2.3:59307106-59307125 None:intergenic 50.0%
GGAAACATCTGAGCTTGTGG+AGG + chr2.3:59307286-59307305 None:intergenic 50.0%
GGCCCTATTCATCCCATCAA+CGG + chr2.3:59307107-59307126 None:intergenic 50.0%
TCAAGTGGAAGGAAAAGCCG+AGG - chr2.3:59306692-59306711 MS.gene02774:CDS 50.0%
TGACCGTATCAACATTGGGG+TGG + chr2.3:59306886-59306905 None:intergenic 50.0%
TGGCCACCCCAATGTTGATA+CGG - chr2.3:59306880-59306899 MS.gene02774:CDS 50.0%
TTCAACAATATGGGCGGAGG+AGG - chr2.3:59307352-59307371 MS.gene02774:CDS 50.0%
! AGTATTGAGATCGCGCACGT+TGG + chr2.3:59306981-59307000 None:intergenic 50.0%
! GTCCCGTTGATGGGATGAAT+AGG - chr2.3:59307101-59307120 MS.gene02774:CDS 50.0%
!! GCTCTCGTTGTTTTCTCACC+TGG - chr2.3:59306839-59306858 MS.gene02774:CDS 50.0%
AACAATATGGGCGGAGGAGG+TGG - chr2.3:59307355-59307374 MS.gene02774:CDS 55.0%
AGTGAGCTTTGCACCCTCTG+TGG - chr2.3:59306806-59306825 MS.gene02774:CDS 55.0%
CGAGTCCCACCCCAAAACAA+TGG - chr2.3:59306923-59306942 MS.gene02774:CDS 55.0%
GGCTTCAACAATATGGGCGG+AGG - chr2.3:59307349-59307368 MS.gene02774:CDS 55.0%
TCTCAGTCGCCTTGTGCAAG+TGG + chr2.3:59307063-59307082 None:intergenic 55.0%
! ACAGAGGGTGCAAAGCTCAC+TGG + chr2.3:59306807-59306826 None:intergenic 55.0%
!! ACTTTCTCGAAGCGCCGTAG+TGG - chr2.3:59306767-59306786 MS.gene02774:CDS 55.0%
!! CTTTCTCGAAGCGCCGTAGT+GGG - chr2.3:59306768-59306787 MS.gene02774:CDS 55.0%
ATGGGCGGAGGAGGTGGATA+TGG - chr2.3:59307361-59307380 MS.gene02774:CDS 60.0%
GGAGGTGGATATGGACCCTC+CGG - chr2.3:59307370-59307389 MS.gene02774:CDS 60.0%
! GGTGGGCTTGTCCCGTTGAT+GGG - chr2.3:59307092-59307111 MS.gene02774:CDS 60.0%
!! GGGTTTGAGTAGGAGCACCC+TGG + chr2.3:59307204-59307223 None:intergenic 60.0%
!! TGGTGGGCTTGTCCCGTTGA+TGG - chr2.3:59307091-59307110 MS.gene02774:CDS 60.0%
GATCGCGCACGTTGGCGCTA+CGG + chr2.3:59306973-59306992 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 59306689 59307402 59306689 ID=MS.gene02774
chr2.3 mRNA 59306689 59307402 59306689 ID=MS.gene02774.t1;Parent=MS.gene02774
chr2.3 exon 59306689 59307402 59306689 ID=MS.gene02774.t1.exon1;Parent=MS.gene02774.t1
chr2.3 CDS 59306689 59307402 59306689 ID=cds.MS.gene02774.t1;Parent=MS.gene02774.t1
Gene Sequence

>MS.gene02774

ATGTCAAGTGGAAGGAAAAGCCGAGGTCGCCAAAAGATTGAAATGAAAAAAATGAGCAACGAGAGCAACTTGCAAGTGACTTTCTCGAAGCGCCGTAGTGGGCTCTTCAAGAAAGCCAGTGAGCTTTGCACCCTCTGTGGTGCAAATGTTGCTCTCGTTGTTTTCTCACCTGGAGAGAAGGTATTTTCATTTGGCCACCCCAATGTTGATACGGTCATAGATCGTTATCTCTCTCGAGTCCCACCCCAAAACAATGGTACCATGCAATTCATTGAGGCTCACCGTAGCGCCAACGTGCGCGATCTCAATACTCAGCTGACTCAGATCAACCAACTATTGGACATCGAGAAGAAACGTGCTGAAGATCTGAGCCACTTGCACAAGGCGACTGAGACTCAATTTTGGTGGGCTTGTCCCGTTGATGGGATGAATAGGGCCCAACTTGAATTATTCAAGAAGGCTCTGGAGGAGCTTAAGAAACTTGTTGCTCATCATGCTAATAGGCTTGTAATCCAGGGTGCTCCTACTCAAACCCTTCCGTTTTTTGTTGGAAACGGTTCATCCTCTAACATGCCTCTCCATCATCAACCAAATCCTCCACAAGCTCAGATGTTTCCATCACAGTTTTATCATAACCCAATGTTGCAACCGCATTTGTTTGGCTTCAACAATATGGGCGGAGGAGGTGGATATGGACCCTCCGGATTCTTTTGA
Protein sequence

>MS.gene02774.t1

MSSGRKSRGRQKIEMKKMSNESNLQVTFSKRRSGLFKKASELCTLCGANVALVVFSPGEKVFSFGHPNVDTVIDRYLSRVPPQNNGTMQFIEAHRSANVRDLNTQLTQINQLLDIEKKRAEDLSHLHKATETQFWWACPVDGMNRAQLELFKKALEELKKLVAHHANRLVIQGAPTQTLPFFVGNGSSSNMPLHHQPNPPQAQMFPSQFYHNPMLQPHLFGFNNMGGGGGYGPSGFF