Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027747.t1 | XP_003613090.1 | 96.8 | 533 | 14 | 1 | 1 | 530 | 1 | 533 | 3.50E-306 | 1060.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027747.t1 | Q8VYN6 | 78.5 | 512 | 108 | 2 | 20 | 530 | 27 | 537 | 8.2e-240 | 830.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027747.t1 | G7JXR3 | 96.8 | 533 | 14 | 1 | 1 | 530 | 1 | 533 | 2.5e-306 | 1060.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene40737 | MS.gene027747 | PPI |
| MS.gene014596 | MS.gene027747 | PPI |
| MS.gene40242 | MS.gene027747 | PPI |
| MS.gene69076 | MS.gene027747 | PPI |
| MS.gene014594 | MS.gene027747 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027747.t1 | MTR_5g032570 | 98.124 | 533 | 7 | 1 | 1 | 530 | 1 | 533 | 0.0 | 1085 |
| MS.gene027747.t1 | MTR_8g069040 | 79.811 | 530 | 100 | 2 | 3 | 530 | 5 | 529 | 0.0 | 878 |
| MS.gene027747.t1 | MTR_1g090300 | 47.380 | 458 | 208 | 7 | 79 | 530 | 90 | 520 | 6.78e-135 | 402 |
| MS.gene027747.t1 | MTR_6g090130 | 52.507 | 379 | 172 | 4 | 158 | 530 | 74 | 450 | 5.87e-134 | 398 |
| MS.gene027747.t1 | MTR_3g110395 | 52.507 | 379 | 172 | 4 | 158 | 530 | 78 | 454 | 1.20e-133 | 398 |
| MS.gene027747.t1 | MTR_8g102190 | 51.842 | 380 | 174 | 4 | 158 | 530 | 77 | 454 | 2.10e-132 | 393 |
| MS.gene027747.t1 | MTR_2g100710 | 45.098 | 459 | 217 | 6 | 79 | 530 | 23 | 453 | 7.72e-130 | 386 |
| MS.gene027747.t1 | MTR_4g134290 | 45.238 | 378 | 200 | 3 | 160 | 530 | 81 | 458 | 9.63e-116 | 350 |
| MS.gene027747.t1 | MTR_8g102190 | 52.174 | 299 | 134 | 4 | 158 | 449 | 77 | 373 | 4.51e-100 | 307 |
| MS.gene027747.t1 | MTR_8g102190 | 53.191 | 282 | 124 | 3 | 159 | 434 | 78 | 357 | 1.44e-96 | 298 |
| MS.gene027747.t1 | MTR_2g100710 | 44.904 | 363 | 165 | 7 | 79 | 434 | 23 | 357 | 4.04e-95 | 294 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene027747.t1 | AT2G22480 | 78.516 | 512 | 108 | 2 | 20 | 530 | 27 | 537 | 0.0 | 838 |
| MS.gene027747.t1 | AT5G56630 | 53.050 | 377 | 171 | 3 | 158 | 530 | 77 | 451 | 5.67e-137 | 405 |
| MS.gene027747.t1 | AT4G26270 | 53.018 | 381 | 166 | 5 | 158 | 530 | 77 | 452 | 3.96e-135 | 401 |
| MS.gene027747.t1 | AT4G32840 | 52.926 | 376 | 172 | 4 | 158 | 530 | 78 | 451 | 4.36e-134 | 397 |
| MS.gene027747.t1 | AT4G29220 | 45.969 | 459 | 212 | 7 | 79 | 530 | 24 | 453 | 1.39e-133 | 396 |
| MS.gene027747.t1 | AT5G61580 | 51.715 | 379 | 175 | 4 | 158 | 530 | 128 | 504 | 2.36e-131 | 392 |
| MS.gene027747.t1 | AT5G61580 | 52.231 | 381 | 169 | 6 | 158 | 530 | 128 | 503 | 1.80e-130 | 390 |
| MS.gene027747.t1 | AT5G47810 | 44.498 | 418 | 208 | 6 | 121 | 529 | 36 | 438 | 4.92e-117 | 353 |
Find 128 sgRNAs with CRISPR-Local
Find 328 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATGGCTGCCTTTACTTCTTC+TGG | 0.234836 | 5.2:+22543042 | None:intergenic |
| CCATGAAAGTCTCTAGTTAT+AGG | 0.260365 | 5.2:+22544545 | None:intergenic |
| CTCTCAGGTGGCAGCCTATT+AGG | 0.270534 | 5.2:-22542425 | MS.gene027747:CDS |
| CGGATCAAAGTGTGTGTTAT+TGG | 0.270583 | 5.2:-22541949 | MS.gene027747:CDS |
| GAGATTGTTGGTATTCCTTT+TGG | 0.274193 | 5.2:-22542633 | MS.gene027747:CDS |
| ACTTACATACCTCGGGAATT+AGG | 0.276615 | 5.2:+22541621 | None:intergenic |
| AATCGGGATTGTGAAATTAA+TGG | 0.277060 | 5.2:-22541705 | MS.gene027747:CDS |
| TAGTGAAATTGTGGATAGTT+TGG | 0.287015 | 5.2:-22542378 | MS.gene027747:CDS |
| GCTTTGGTATTGCAGGTTCA+TGG | 0.290416 | 5.2:-22539673 | MS.gene027747:intron |
| GAAGGGTGGTGGTGAGGTTA+GGG | 0.290525 | 5.2:+22545383 | None:intergenic |
| CTGATCCCTTTGATTCTATA+AGG | 0.291613 | 5.2:+22541473 | None:intergenic |
| CTATTGATGGACAAAACTTT+TGG | 0.291628 | 5.2:-22541898 | MS.gene027747:CDS |
| GAAAAGACGATGGTTGGTTT+TGG | 0.310529 | 5.2:+22545315 | None:intergenic |
| GCATTGATCCTGGCTGTAAT+TGG | 0.311570 | 5.2:-22543395 | MS.gene027747:CDS |
| TTTCATGGGAATTATGATTC+TGG | 0.312524 | 5.2:-22544530 | MS.gene027747:CDS |
| CAGGTTCATGGTGCATTTGC+TGG | 0.329427 | 5.2:-22539661 | MS.gene027747:CDS |
| CGATGCCACATTCGACTGTT+TGG | 0.331058 | 5.2:+22539550 | None:intergenic |
| TGAAGGGTGGTGGTGAGGTT+AGG | 0.342291 | 5.2:+22545382 | None:intergenic |
| TGCGATATTACTTCGGTGAT+TGG | 0.351808 | 5.2:+22539589 | None:intergenic |
| GTAATCACACTTGAAATATA+TGG | 0.362471 | 5.2:-22542663 | MS.gene027747:CDS |
| CTCTTTGTGTTGGGTGGAAA+TGG | 0.365286 | 5.2:-22542192 | MS.gene027747:CDS |
| GGCGCTCAGTGCATTGATCC+TGG | 0.376773 | 5.2:-22543405 | MS.gene027747:CDS |
| TTAAACTTATCTTTCCAATC+AGG | 0.379826 | 5.2:+22545217 | None:intergenic |
| TTGATTACAATGATCCTGAT+TGG | 0.380703 | 5.2:-22545231 | MS.gene027747:CDS |
| AGACAATGATATTCTATTGA+TGG | 0.383675 | 5.2:-22541911 | MS.gene027747:CDS |
| AATGCTAAACTTGGAGATAT+CGG | 0.387969 | 5.2:-22541245 | MS.gene027747:CDS |
| TTGATCCAACATACATGATT+CGG | 0.395697 | 5.2:-22540760 | MS.gene027747:CDS |
| AGTAATATCGCATCCTCAAT+TGG | 0.405969 | 5.2:-22539578 | MS.gene027747:CDS |
| CTCCGCGTGAAACTCCTAAT+AGG | 0.411712 | 5.2:+22542411 | None:intergenic |
| TGTTAGAGACTTTGAATGAA+TGG | 0.419132 | 5.2:+22545293 | None:intergenic |
| ATCAACATGCTCTTTGTGTT+GGG | 0.422869 | 5.2:-22542201 | MS.gene027747:CDS |
| AATAATAGCAAACCTCTTGT+TGG | 0.426233 | 5.2:+22541213 | None:intergenic |
| ATGCTAAACTTGGAGATATC+GGG | 0.438212 | 5.2:-22541244 | MS.gene027747:CDS |
| ATCGGGATTGTGAAATTAAT+GGG | 0.439443 | 5.2:-22541704 | MS.gene027747:CDS |
| TCAAATGAAGTCGGGTTGAC+CGG | 0.450420 | 5.2:+22539513 | None:intergenic |
| CCTATAACTAGAGACTTTCA+TGG | 0.455161 | 5.2:-22544545 | MS.gene027747:CDS |
| TGATCCAACATACATGATTC+GGG | 0.455405 | 5.2:-22540759 | MS.gene027747:CDS |
| ACTAATGATACCGATGCCTC+AGG | 0.456950 | 5.2:-22541269 | MS.gene027747:CDS |
| CATAGTGCATATCACGGAAT+CGG | 0.460277 | 5.2:-22541722 | MS.gene027747:CDS |
| CTGTTTGGATCCACCAATTG+AGG | 0.462985 | 5.2:+22539565 | None:intergenic |
| GAACGCATAGAAGAAGCATC+AGG | 0.466750 | 5.2:+22545145 | None:intergenic |
| CAAGTACCTTATAGAATCAA+AGG | 0.468839 | 5.2:-22541479 | MS.gene027747:CDS |
| CATTGATCCTGGCTGTAATT+GGG | 0.472888 | 5.2:-22543394 | MS.gene027747:CDS |
| ACTTGTGGAGGACTGTGTCC+TGG | 0.474252 | 5.2:-22543015 | MS.gene027747:CDS |
| GAAAATAATCAAATGAAGTC+GGG | 0.476259 | 5.2:+22539505 | None:intergenic |
| AAGGTTCCTTTCAATTTACA+TGG | 0.477045 | 5.2:-22541526 | MS.gene027747:CDS |
| AATAAATTCTGCATATATAG+AGG | 0.477305 | 5.2:-22541842 | MS.gene027747:intron |
| ATCAATCTGTCCACTGGCTA+AGG | 0.477541 | 5.2:+22541649 | None:intergenic |
| GGAGTTTCACGCGGAGGACC+TGG | 0.478048 | 5.2:-22542404 | MS.gene027747:CDS |
| TTCAATTTACATGGACCTCA+TGG | 0.479511 | 5.2:-22541517 | MS.gene027747:CDS |
| GGTGCATTTGCTGGATATAG+TGG | 0.480453 | 5.2:-22539652 | MS.gene027747:CDS |
| GATCAACATGCTCTTTGTGT+TGG | 0.483619 | 5.2:-22542202 | MS.gene027747:CDS |
| GTTTGTGTGGCAGAGGGAGC+AGG | 0.484756 | 5.2:-22541445 | MS.gene027747:CDS |
| TGTGGCAGAGGGAGCAGGAC+AGG | 0.492036 | 5.2:-22541440 | MS.gene027747:intron |
| GCCTCAGGGAATGCTAAACT+TGG | 0.493945 | 5.2:-22541254 | MS.gene027747:CDS |
| GTTGATTGATTGCAGGAAAG+AGG | 0.494138 | 5.2:-22542225 | MS.gene027747:intron |
| GTTCAAAACATTCATCTCTC+AGG | 0.497136 | 5.2:-22542440 | MS.gene027747:CDS |
| CAAAGAGTTGATGGAAATAC+CGG | 0.500018 | 5.2:-22542592 | MS.gene027747:intron |
| ATAGTGCATATCACGGAATC+GGG | 0.501886 | 5.2:-22541721 | MS.gene027747:CDS |
| TCTTAACGATGTCATTAGAC+AGG | 0.502961 | 5.2:-22542992 | MS.gene027747:intron |
| CTTCAAACCAGAAGAAGTAA+AGG | 0.503634 | 5.2:-22543049 | MS.gene027747:CDS |
| CTTTGTAGGGTTCATCGAGC+TGG | 0.505957 | 5.2:-22543090 | MS.gene027747:intron |
| AGAAAATAATCAAATGAAGT+CGG | 0.506105 | 5.2:+22539504 | None:intergenic |
| TAATGACAGAGTGCTTCTTA+AGG | 0.510674 | 5.2:-22544480 | MS.gene027747:intron |
| TTTAGCATTCCCTGAGGCAT+CGG | 0.516712 | 5.2:+22541259 | None:intergenic |
| AGCTGTAGTTTGTGTGGCAG+AGG | 0.521624 | 5.2:-22541452 | MS.gene027747:CDS |
| ACCTGGAGTTAGTGAAATTG+TGG | 0.529574 | 5.2:-22542387 | MS.gene027747:CDS |
| TTGATTGATTGCAGGAAAGA+GGG | 0.531805 | 5.2:-22542224 | MS.gene027747:intron |
| ATTATGATTCTGGTGAGGAA+TGG | 0.538440 | 5.2:-22544520 | MS.gene027747:CDS |
| CATTCATCACCTACATCTGC+TGG | 0.539977 | 5.2:-22543426 | MS.gene027747:CDS |
| CAGCAGATGTAGGTGATGAA+TGG | 0.540591 | 5.2:+22543427 | None:intergenic |
| AAATTAATGGGCCGTAGCAG+TGG | 0.542200 | 5.2:-22541692 | MS.gene027747:CDS |
| AAGGCAGCCATTGTTACTTG+TGG | 0.549028 | 5.2:-22543030 | MS.gene027747:CDS |
| AACATGCTCTTTGTGTTGGG+TGG | 0.552403 | 5.2:-22542198 | MS.gene027747:CDS |
| GGTGGAAATGGTACACATGC+TGG | 0.556073 | 5.2:-22542180 | MS.gene027747:CDS |
| CACGCCCGAATCATGTATGT+TGG | 0.556320 | 5.2:+22540755 | None:intergenic |
| TGAATGGAAAAGACGATGGT+TGG | 0.556929 | 5.2:+22545309 | None:intergenic |
| TGAGGTCCATGTAAATTGAA+AGG | 0.559778 | 5.2:+22541520 | None:intergenic |
| GGATATAGTGGCATTACAGT+AGG | 0.561938 | 5.2:-22539640 | MS.gene027747:CDS |
| TGAAATTGTGGATAGTTTGG+AGG | 0.562109 | 5.2:-22542375 | MS.gene027747:intron |
| CTTCATCATCATCATGTGCA+TGG | 0.564878 | 5.2:-22545364 | MS.gene027747:CDS |
| AAGTACCTTATAGAATCAAA+GGG | 0.565661 | 5.2:-22541478 | MS.gene027747:CDS |
| GCAGCCATTGTTACTTGTGG+AGG | 0.566120 | 5.2:-22543027 | MS.gene027747:CDS |
| TGTTCCACCCAATTACAGCC+AGG | 0.572176 | 5.2:+22543387 | None:intergenic |
| AAGGGTGGTGGTGAGGTTAG+GGG | 0.573747 | 5.2:+22545384 | None:intergenic |
| TCCACAATTTCACTAACTCC+AGG | 0.574739 | 5.2:+22542386 | None:intergenic |
| GCATACATCAATCTGTCCAC+TGG | 0.575151 | 5.2:+22541643 | None:intergenic |
| CACTGAGCGCCAGCAGATGT+AGG | 0.576254 | 5.2:+22543417 | None:intergenic |
| CGGGGTTTATATCCAACAAG+AGG | 0.576795 | 5.2:-22541225 | MS.gene027747:intron |
| GATTTCATTTACAGTTGTCA+AGG | 0.579795 | 5.2:-22542469 | MS.gene027747:intron |
| TTGCTATGAATCCACTGCTA+CGG | 0.580298 | 5.2:+22541681 | None:intergenic |
| TGTCGAGCAAATGCTTCAGA+TGG | 0.581648 | 5.2:-22540734 | MS.gene027747:CDS |
| CTAATGATACCGATGCCTCA+GGG | 0.586166 | 5.2:-22541268 | MS.gene027747:CDS |
| CATCGATGCTTAACTTCGAC+CGG | 0.587899 | 5.2:-22539532 | MS.gene027747:CDS |
| TATGGTGTAACTGAGATTGT+TGG | 0.587899 | 5.2:-22542645 | MS.gene027747:CDS |
| GGGAAAATATCAGTAACATG+AGG | 0.589366 | 5.2:+22545166 | None:intergenic |
| GGAAAATATCAGTAACATGA+GGG | 0.596785 | 5.2:+22545167 | None:intergenic |
| TTGAGGATGCGATATTACTT+CGG | 0.597150 | 5.2:+22539582 | None:intergenic |
| CATGCACATGATGATGATGA+AGG | 0.601136 | 5.2:+22545365 | None:intergenic |
| GCTGTAGTTTGTGTGGCAGA+GGG | 0.603354 | 5.2:-22541451 | MS.gene027747:CDS |
| CTAATGACATCGTTAAGACC+AGG | 0.614698 | 5.2:+22542997 | None:intergenic |
| TGCTAAACTTGGAGATATCG+GGG | 0.616169 | 5.2:-22541243 | MS.gene027747:CDS |
| GATTCTGGTGAGGAATGGAA+TGG | 0.617100 | 5.2:-22544515 | MS.gene027747:CDS |
| CACTGTACTTGGACAGAATG+CGG | 0.618998 | 5.2:-22540702 | MS.gene027747:intron |
| TCTTTGTGCTTCTTCAACCG+CGG | 0.622748 | 5.2:+22541867 | None:intergenic |
| GGGATCAGCTGTAGTTTGTG+TGG | 0.624112 | 5.2:-22541458 | MS.gene027747:CDS |
| CAGTCCTCCACAAGTAACAA+TGG | 0.624369 | 5.2:+22543023 | None:intergenic |
| GCTGTAATTGGGTGGAACAA+TGG | 0.626331 | 5.2:-22543383 | MS.gene027747:intron |
| CTATAACTAGAGACTTTCAT+GGG | 0.628864 | 5.2:-22544544 | MS.gene027747:CDS |
| CAAAACATTCATCTCTCAGG+TGG | 0.633928 | 5.2:-22542437 | MS.gene027747:CDS |
| AATATCGCATCCTCAATTGG+TGG | 0.636705 | 5.2:-22539575 | MS.gene027747:CDS |
| GATGATGAAGGGTGGTGGTG+AGG | 0.637750 | 5.2:+22545377 | None:intergenic |
| TGATCCTGGCTGTAATTGGG+TGG | 0.639090 | 5.2:-22543391 | MS.gene027747:CDS |
| ATGCAATCTTCCTTAGCCAG+TGG | 0.639507 | 5.2:-22541659 | MS.gene027747:CDS |
| TGGATCCAAACAGTCGAATG+TGG | 0.644484 | 5.2:-22539555 | MS.gene027747:CDS |
| AACGCATAGAAGAAGCATCA+GGG | 0.646346 | 5.2:+22545146 | None:intergenic |
| TGGGAATTATGATTCTGGTG+AGG | 0.647827 | 5.2:-22544525 | MS.gene027747:CDS |
| ATGATGATGATGAAGGGTGG+TGG | 0.656421 | 5.2:+22545372 | None:intergenic |
| TGATGTATGCCTAATTCCCG+AGG | 0.666643 | 5.2:-22541630 | MS.gene027747:intron |
| TAGGCACATAGTGCATATCA+CGG | 0.667976 | 5.2:-22541728 | MS.gene027747:CDS |
| ATGCACATGATGATGATGAA+GGG | 0.671280 | 5.2:+22545366 | None:intergenic |
| AGATGACTCAAAACTCCATG+AGG | 0.675700 | 5.2:+22541502 | None:intergenic |
| TGAATGAATGGAAAAGACGA+TGG | 0.676616 | 5.2:+22545305 | None:intergenic |
| CTATTAGGAGTTTCACGCGG+AGG | 0.683751 | 5.2:-22542410 | MS.gene027747:CDS |
| TGCAAATGCAATTCACGACG+AGG | 0.685123 | 5.2:-22542157 | MS.gene027747:intron |
| CACATGATGATGATGAAGGG+TGG | 0.713897 | 5.2:+22545369 | None:intergenic |
| TCCAAGTTTAGCATTCCCTG+AGG | 0.733572 | 5.2:+22541253 | None:intergenic |
| AGCCTATTAGGAGTTTCACG+CGG | 0.736304 | 5.2:-22542413 | MS.gene027747:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATATATATATATACAACAAT+GGG | + | chr5.2:22544266-22544285 | None:intergenic | 10.0% |
| !! | TACATATAAAATAAAAATCA+CGG | + | chr5.2:22542667-22542686 | None:intergenic | 10.0% |
| !! | TATTAAATAGAAAATAATAC+CGG | + | chr5.2:22543133-22543152 | None:intergenic | 10.0% |
| !!! | AAACTAAAGTATATTTTTTT+AGG | + | chr5.2:22540174-22540193 | None:intergenic | 10.0% |
| !!! | TTTAGTTTAAAAAAATAACA+CGG | - | chr5.2:22540186-22540205 | MS.gene027747:intron | 10.0% |
| !! | AAATGCAATTAACTAATATA+AGG | + | chr5.2:22542801-22542820 | None:intergenic | 15.0% |
| !! | AATCAATTTCATTAATAGAA+TGG | + | chr5.2:22542579-22542598 | None:intergenic | 15.0% |
| !! | AATGCAATTAACTAATATAA+GGG | + | chr5.2:22542800-22542819 | None:intergenic | 15.0% |
| !! | ATTAAATAGAAAATAATACC+GGG | + | chr5.2:22543132-22543151 | None:intergenic | 15.0% |
| !! | CATATATATATATACAACAA+TGG | + | chr5.2:22544267-22544286 | None:intergenic | 15.0% |
| !! | TAGAATTAACATAAAAACAA+GGG | - | chr5.2:22543850-22543869 | MS.gene027747:intron | 15.0% |
| !!! | AATATTTTACTTGTCTTATT+AGG | - | chr5.2:22543169-22543188 | MS.gene027747:intron | 15.0% |
| !!! | GTATTTATATTGATGATTTT+TGG | + | chr5.2:22540546-22540565 | None:intergenic | 15.0% |
| !!! | TATATTTTTTTAGGCAAATA+GGG | + | chr5.2:22540165-22540184 | None:intergenic | 15.0% |
| !!! | TATGATTTCACTTTTATTAT+TGG | - | chr5.2:22544283-22544302 | MS.gene027747:intron | 15.0% |
| !!! | TTTATGTTTTAATCTAGTTA+GGG | - | chr5.2:22540116-22540135 | MS.gene027747:intron | 15.0% |
| !! | AAATAATATAAAGCTAGATG+TGG | + | chr5.2:22544556-22544575 | None:intergenic | 20.0% |
| !! | AATAAATTCTGCATATATAG+AGG | - | chr5.2:22543074-22543093 | MS.gene027747:CDS | 20.0% |
| !! | AATATCGAATAACAAATGTA+CGG | + | chr5.2:22545215-22545234 | None:intergenic | 20.0% |
| !! | ACAGTTTCTTTCATTATATT+TGG | + | chr5.2:22543822-22543841 | None:intergenic | 20.0% |
| !! | AGTTTATGCTTTATAAGATT+AGG | - | chr5.2:22544838-22544857 | MS.gene027747:intron | 20.0% |
| !! | ATATCTAGTTGTTGAAAATA+CGG | - | chr5.2:22544980-22544999 | MS.gene027747:intron | 20.0% |
| !! | CTAACTAGATTAAAACATAA+AGG | + | chr5.2:22540117-22540136 | None:intergenic | 20.0% |
| !! | CTAGAATTAACATAAAAACA+AGG | - | chr5.2:22543849-22543868 | MS.gene027747:intron | 20.0% |
| !! | TGAATATTTACAATAAACTG+TGG | - | chr5.2:22544702-22544721 | MS.gene027747:intron | 20.0% |
| !! | TTGTAATCTATGATTTCTTA+AGG | - | chr5.2:22542833-22542852 | MS.gene027747:intron | 20.0% |
| !!! | AAATCTCTTTCAAAAGTTTT+TGG | - | chr5.2:22542031-22542050 | MS.gene027747:intron | 20.0% |
| !!! | AACTATTGTTCATAATTTTC+CGG | + | chr5.2:22541680-22541699 | None:intergenic | 20.0% |
| !!! | ACATCTTAAACAATTTTACA+TGG | + | chr5.2:22539917-22539936 | None:intergenic | 20.0% |
| !!! | ATATCATTGTCTATAGTTTT+CGG | + | chr5.2:22542997-22543016 | None:intergenic | 20.0% |
| !!! | ATCAATTCATTGTTGTTAAA+TGG | + | chr5.2:22540676-22540695 | None:intergenic | 20.0% |
| !!! | CTTTATGTTTTAATCTAGTT+AGG | - | chr5.2:22540115-22540134 | MS.gene027747:intron | 20.0% |
| !!! | CTTTTAACAGAAATAAAACT+AGG | + | chr5.2:22543999-22544018 | None:intergenic | 20.0% |
| !!! | GTATATTTTTTTAGGCAAAT+AGG | + | chr5.2:22540166-22540185 | None:intergenic | 20.0% |
| !!! | TAAGTTTAAAGAAGATTTTG+AGG | - | chr5.2:22539713-22539732 | MS.gene027747:intron | 20.0% |
| !!! | TAGATATTGGATATTGTTTT+AGG | - | chr5.2:22540729-22540748 | MS.gene027747:CDS | 20.0% |
| !!! | TTCTTTGGAAAAATATTTTC+AGG | + | chr5.2:22543555-22543574 | None:intergenic | 20.0% |
| !!! | TTGAAGTATATATTTTTTCG+AGG | + | chr5.2:22541853-22541872 | None:intergenic | 20.0% |
| !!! | TTTGTAATTCTTTTCATAGT+TGG | - | chr5.2:22539816-22539835 | MS.gene027747:intron | 20.0% |
| ! | AAAGCAGAAATCTTATATGT+AGG | + | chr5.2:22544811-22544830 | None:intergenic | 25.0% |
| ! | AAGTACCTTATAGAATCAAA+GGG | - | chr5.2:22543438-22543457 | MS.gene027747:CDS | 25.0% |
| ! | ACAATGAATTGATTATGAAG+AGG | - | chr5.2:22540683-22540702 | MS.gene027747:intron | 25.0% |
| ! | ACAGTATATCAATAGAAACT+TGG | + | chr5.2:22544630-22544649 | None:intergenic | 25.0% |
| ! | AGACAAATATTACTTCTGTA+TGG | + | chr5.2:22542605-22542624 | None:intergenic | 25.0% |
| ! | AGACAATGATATTCTATTGA+TGG | - | chr5.2:22543005-22543024 | MS.gene027747:CDS | 25.0% |
| ! | ATGTCTGATGATATATTCTT+TGG | + | chr5.2:22543570-22543589 | None:intergenic | 25.0% |
| ! | ATTAACATAAAAACAAGGGA+TGG | - | chr5.2:22543854-22543873 | MS.gene027747:intron | 25.0% |
| ! | GTAATCACACTTGAAATATA+TGG | - | chr5.2:22542253-22542272 | MS.gene027747:intron | 25.0% |
| ! | GTCTGAAAAAAAAAAGTTGT+TGG | + | chr5.2:22544089-22544108 | None:intergenic | 25.0% |
| ! | GTGCTTACAATAATGTAAAT+GGG | - | chr5.2:22543734-22543753 | MS.gene027747:intron | 25.0% |
| ! | TACAAAATGTTGTCAAATAG+TGG | - | chr5.2:22541143-22541162 | MS.gene027747:intron | 25.0% |
| ! | TATGCTTTATAAGATTAGGA+GGG | - | chr5.2:22544842-22544861 | MS.gene027747:intron | 25.0% |
| ! | TCAGACGAAAAATTATTTCA+AGG | - | chr5.2:22544103-22544122 | MS.gene027747:intron | 25.0% |
| ! | TGATCAAATAGTTTCTGATA+TGG | - | chr5.2:22541955-22541974 | MS.gene027747:CDS | 25.0% |
| ! | TGTATAAGGATGAAAAATGT+AGG | - | chr5.2:22544589-22544608 | MS.gene027747:intron | 25.0% |
| ! | TTAAAACATATGTTCGTTCT+TGG | - | chr5.2:22541245-22541264 | MS.gene027747:CDS | 25.0% |
| ! | TTAAACTTATCTTTCCAATC+AGG | + | chr5.2:22539702-22539721 | None:intergenic | 25.0% |
| ! | TTAAATACCAGATTGACATT+AGG | + | chr5.2:22541575-22541594 | None:intergenic | 25.0% |
| ! | TTACAATAAACTGTGGTAAA+TGG | - | chr5.2:22544709-22544728 | MS.gene027747:intron | 25.0% |
| ! | TTATGCTTTATAAGATTAGG+AGG | - | chr5.2:22544841-22544860 | MS.gene027747:intron | 25.0% |
| ! | TTGTACTAAATAACGTAACA+TGG | + | chr5.2:22544433-22544452 | None:intergenic | 25.0% |
| !! | AATTCATTGTTGTTAAATGG+TGG | + | chr5.2:22540673-22540692 | None:intergenic | 25.0% |
| !! | ACATTTTTCATCCTTATACA+TGG | + | chr5.2:22544589-22544608 | None:intergenic | 25.0% |
| !! | CATTTTTCATCCTTATACAT+GGG | + | chr5.2:22544588-22544607 | None:intergenic | 25.0% |
| !! | GTATTTTCAACAACTAGATA+TGG | + | chr5.2:22544981-22545000 | None:intergenic | 25.0% |
| !! | TCTTAAGGAAATCATCTTTT+TGG | - | chr5.2:22542848-22542867 | MS.gene027747:intron | 25.0% |
| !! | TTAAGGTAGTTTGCATTATT+TGG | - | chr5.2:22540453-22540472 | MS.gene027747:intron | 25.0% |
| !! | TTTTTAACAGCTGAAACAAA+CGG | + | chr5.2:22542013-22542032 | None:intergenic | 25.0% |
| !!! | AAAGAGTTGATATGAATACA+AGG | + | chr5.2:22544338-22544357 | None:intergenic | 25.0% |
| !!! | AAGTTTTTTGAGTAACTTCT+GGG | - | chr5.2:22542098-22542117 | MS.gene027747:intron | 25.0% |
| !!! | AATCATATTAGTCTTCTTTG+TGG | - | chr5.2:22540844-22540863 | MS.gene027747:intron | 25.0% |
| !!! | AGTTTTTAACTTACATACCT+CGG | + | chr5.2:22543306-22543325 | None:intergenic | 25.0% |
| !!! | ATATTGGATATTGTTTTAGG+TGG | - | chr5.2:22540732-22540751 | MS.gene027747:CDS | 25.0% |
| !!! | GAATCAATTGTTGTTTAGAA+GGG | + | chr5.2:22542363-22542382 | None:intergenic | 25.0% |
| !!! | GATGGTGATTTTAATATTCT+TGG | - | chr5.2:22543872-22543891 | MS.gene027747:intron | 25.0% |
| !!! | TAAGTTTTTTGAGTAACTTC+TGG | - | chr5.2:22542097-22542116 | MS.gene027747:intron | 25.0% |
| !!! | TGTTATTCGATATTGATTCT+CGG | - | chr5.2:22545221-22545240 | MS.gene027747:CDS | 25.0% |
| !!! | TTGTGATTATTTGTTTTGTG+TGG | - | chr5.2:22544892-22544911 | MS.gene027747:intron | 25.0% |
| AAACAGAAGATTCCAACTTA+AGG | + | chr5.2:22540989-22541008 | None:intergenic | 30.0% | |
| AAGGTTCCTTTCAATTTACA+TGG | - | chr5.2:22543390-22543409 | MS.gene027747:CDS | 30.0% | |
| AATAATAGCAAACCTCTTGT+TGG | + | chr5.2:22543706-22543725 | None:intergenic | 30.0% | |
| AATAGTTTCTGATATGGCTT+TGG | - | chr5.2:22541961-22541980 | MS.gene027747:CDS | 30.0% | |
| AATCGGGATTGTGAAATTAA+TGG | - | chr5.2:22543211-22543230 | MS.gene027747:intron | 30.0% | |
| AATGCTAAACTTGGAGATAT+CGG | - | chr5.2:22543671-22543690 | MS.gene027747:intron | 30.0% | |
| AGACATAGCATGATTTACAA+GGG | + | chr5.2:22544764-22544783 | None:intergenic | 30.0% | |
| ATCGGGATTGTGAAATTAAT+GGG | - | chr5.2:22543212-22543231 | MS.gene027747:intron | 30.0% | |
| ATGAATCAATTTGACAAACC+CGG | - | chr5.2:22543111-22543130 | MS.gene027747:intron | 30.0% | |
| ATTTAGAGATGAACATTCTC+CGG | - | chr5.2:22541658-22541677 | MS.gene027747:CDS | 30.0% | |
| CAAGTACCTTATAGAATCAA+AGG | - | chr5.2:22543437-22543456 | MS.gene027747:CDS | 30.0% | |
| CGATTATTTATTACCCGAAA+CGG | + | chr5.2:22540954-22540973 | None:intergenic | 30.0% | |
| CTAAAGAAACGTTCCAAATA+CGG | + | chr5.2:22540012-22540031 | None:intergenic | 30.0% | |
| CTATAACTAGAGACTTTCAT+GGG | - | chr5.2:22540372-22540391 | MS.gene027747:intron | 30.0% | |
| GACGTTAACGAATATATTTG+AGG | + | chr5.2:22542159-22542178 | None:intergenic | 30.0% | |
| GATTTCATTTACAGTTGTCA+AGG | - | chr5.2:22542447-22542466 | MS.gene027747:CDS | 30.0% | |
| GCTGTTGTTAATGTAGATAT+TGG | - | chr5.2:22540716-22540735 | MS.gene027747:CDS | 30.0% | |
| GGAAAATATCAGTAACATGA+GGG | + | chr5.2:22539752-22539771 | None:intergenic | 30.0% | |
| GGTGCTTACAATAATGTAAA+TGG | - | chr5.2:22543733-22543752 | MS.gene027747:intron | 30.0% | |
| TAGACATAGCATGATTTACA+AGG | + | chr5.2:22544765-22544784 | None:intergenic | 30.0% | |
| TAGTGAAATTGTGGATAGTT+TGG | - | chr5.2:22542538-22542557 | MS.gene027747:intron | 30.0% | |
| TCAATATAAATACGCCATTG+CGG | - | chr5.2:22540553-22540572 | MS.gene027747:intron | 30.0% | |
| TGTTAGAGACTTTGAATGAA+TGG | + | chr5.2:22539626-22539645 | None:intergenic | 30.0% | |
| TTCAATTGACAAAACTACTC+AGG | + | chr5.2:22545008-22545027 | None:intergenic | 30.0% | |
| TTGATCCAACATACATGATT+CGG | - | chr5.2:22544156-22544175 | MS.gene027747:intron | 30.0% | |
| TTGATTACAATGATCCTGAT+TGG | - | chr5.2:22539685-22539704 | MS.gene027747:intron | 30.0% | |
| TTGTACTAAATAGTGTATCG+TGG | + | chr5.2:22541128-22541147 | None:intergenic | 30.0% | |
| TTTCATGGGAATTATGATTC+TGG | - | chr5.2:22540386-22540405 | MS.gene027747:intron | 30.0% | |
| ! | GATATACTGTTTTCACAGAA+AGG | - | chr5.2:22544640-22544659 | MS.gene027747:intron | 30.0% |
| ! | GTATATTGTTGATTGATTGC+AGG | - | chr5.2:22542684-22542703 | MS.gene027747:intron | 30.0% |
| ! | TGATTTTCCTAATGTCAATC+TGG | - | chr5.2:22541565-22541584 | MS.gene027747:intron | 30.0% |
| ! | TTGGTTCATTGGTTGAAAAT+TGG | - | chr5.2:22541007-22541026 | MS.gene027747:intron | 30.0% |
| ! | TTTGAAGTAAATTCTGCATC+AGG | + | chr5.2:22543625-22543644 | None:intergenic | 30.0% |
| ! | TTTTAACAGCTGAAACAAAC+GGG | + | chr5.2:22542012-22542031 | None:intergenic | 30.0% |
| ! | TTTTTCACTTATCCTTGCAT+TGG | - | chr5.2:22541318-22541337 | MS.gene027747:intron | 30.0% |
| ! | TTTTTCTGACAAAGAGTTGA+TGG | - | chr5.2:22542315-22542334 | MS.gene027747:intron | 30.0% |
| !! | AAAGGTTCTGAAATCTTTGT+AGG | - | chr5.2:22541812-22541831 | MS.gene027747:intron | 30.0% |
| !! | AAGGTTCTGAAATCTTTGTA+GGG | - | chr5.2:22541813-22541832 | MS.gene027747:intron | 30.0% |
| !! | AATACAACAGTTCTAAAACG+CGG | + | chr5.2:22544471-22544490 | None:intergenic | 30.0% |
| !! | AGAAAAAGCATTAAAGACAG+TGG | + | chr5.2:22544869-22544888 | None:intergenic | 30.0% |
| !! | ATTGCAAGCAACTTGTTTTT+CGG | - | chr5.2:22541617-22541636 | MS.gene027747:intron | 30.0% |
| !! | CGAATCAATTGTTGTTTAGA+AGG | + | chr5.2:22542364-22542383 | None:intergenic | 30.0% |
| !! | CTATTGATGGACAAAACTTT+TGG | - | chr5.2:22543018-22543037 | MS.gene027747:CDS | 30.0% |
| !! | GATTGTGATTTGTTGATGTT+TGG | - | chr5.2:22540287-22540306 | MS.gene027747:intron | 30.0% |
| !! | GGTTTGCTATTATTTGCTTA+TGG | - | chr5.2:22543712-22543731 | MS.gene027747:intron | 30.0% |
| !! | TTAAGTTGGAATCTTCTGTT+TGG | - | chr5.2:22540988-22541007 | MS.gene027747:intron | 30.0% |
| !!! | CTACTTTTTGTCTCAAAATG+AGG | - | chr5.2:22539793-22539812 | MS.gene027747:intron | 30.0% |
| !!! | GTTTGCTTTTTTCTTTCACT+TGG | - | chr5.2:22540061-22540080 | MS.gene027747:intron | 30.0% |
| !!! | GTTTTTAACTTACATACCTC+GGG | + | chr5.2:22543305-22543324 | None:intergenic | 30.0% |
| !!! | TTAAAGAAGATTTTGAGGCA+CGG | - | chr5.2:22539718-22539737 | MS.gene027747:intron | 30.0% |
| AAGTAGTCAATCACAGATAG+CGG | + | chr5.2:22541222-22541241 | None:intergenic | 35.0% | |
| AAGTTCTATCTGTGGTTCAA+AGG | - | chr5.2:22543371-22543390 | MS.gene027747:intron | 35.0% | |
| ACAAAAGACATTCCAATGCA+AGG | + | chr5.2:22541333-22541352 | None:intergenic | 35.0% | |
| ACTGATACAAGTTCTATCTG+TGG | - | chr5.2:22543363-22543382 | MS.gene027747:intron | 35.0% | |
| AGCTATAAACTTCGTGTTTG+AGG | - | chr5.2:22540889-22540908 | MS.gene027747:intron | 35.0% | |
| AGTAATATCGCATCCTCAAT+TGG | - | chr5.2:22545338-22545357 | MS.gene027747:CDS | 35.0% | |
| ATAAACTTCGTGTTTGAGGA+TGG | - | chr5.2:22540893-22540912 | MS.gene027747:intron | 35.0% | |
| ATAAAGACAGAAAGCTAGCT+AGG | + | chr5.2:22543332-22543351 | None:intergenic | 35.0% | |
| ATCAACATGCTCTTTGTGTT+GGG | - | chr5.2:22542715-22542734 | MS.gene027747:intron | 35.0% | |
| ATCGAAATGAAGTGAAATGC+TGG | - | chr5.2:22541360-22541379 | MS.gene027747:intron | 35.0% | |
| ATGCTAAACTTGGAGATATC+GGG | - | chr5.2:22543672-22543691 | MS.gene027747:intron | 35.0% | |
| ATTATGATTCTGGTGAGGAA+TGG | - | chr5.2:22540396-22540415 | MS.gene027747:intron | 35.0% | |
| ATTCCTTCACAAACTTCCTA+TGG | - | chr5.2:22540599-22540618 | MS.gene027747:intron | 35.0% | |
| CATATGGCATTTCCACTTAT+GGG | - | chr5.2:22544954-22544973 | MS.gene027747:intron | 35.0% | |
| CCATGAAAGTCTCTAGTTAT+AGG | + | chr5.2:22540374-22540393 | None:intergenic | 35.0% | |
| CCTATAACTAGAGACTTTCA+TGG | - | chr5.2:22540371-22540390 | MS.gene027747:intron | 35.0% | |
| CTATGTTTCCTTTCGAATCA+AGG | - | chr5.2:22545169-22545188 | MS.gene027747:CDS | 35.0% | |
| CTCAAATTCTTGCCTTAAGT+TGG | - | chr5.2:22540974-22540993 | MS.gene027747:intron | 35.0% | |
| CTGATCCCTTTGATTCTATA+AGG | + | chr5.2:22543446-22543465 | None:intergenic | 35.0% | |
| CTTCAAACCAGAAGAAGTAA+AGG | - | chr5.2:22541867-22541886 | MS.gene027747:CDS | 35.0% | |
| GAACACGTGAAATATGATCA+TGG | + | chr5.2:22545132-22545151 | None:intergenic | 35.0% | |
| GAAGGGAAATATGAGATTAC+CGG | + | chr5.2:22542346-22542365 | None:intergenic | 35.0% | |
| GGGAAAATATCAGTAACATG+AGG | + | chr5.2:22539753-22539772 | None:intergenic | 35.0% | |
| GGGAATTGTATTCTCATTCA+AGG | + | chr5.2:22544921-22544940 | None:intergenic | 35.0% | |
| GTTCAAAACATTCATCTCTC+AGG | - | chr5.2:22542476-22542495 | MS.gene027747:intron | 35.0% | |
| TAACGTCATGTACGTTACAT+TGG | - | chr5.2:22542172-22542191 | MS.gene027747:CDS | 35.0% | |
| TAGACGCTATTTAACAACTC+TGG | + | chr5.2:22544376-22544395 | None:intergenic | 35.0% | |
| TATGGTGTAACTGAGATTGT+TGG | - | chr5.2:22542271-22542290 | MS.gene027747:intron | 35.0% | |
| TCTTAACGATGTCATTAGAC+AGG | - | chr5.2:22541924-22541943 | MS.gene027747:CDS | 35.0% | |
| TGAAATTGTGGATAGTTTGG+AGG | - | chr5.2:22542541-22542560 | MS.gene027747:intron | 35.0% | |
| TGAATGAATGGAAAAGACGA+TGG | + | chr5.2:22539614-22539633 | None:intergenic | 35.0% | |
| TGAGGTCCATGTAAATTGAA+AGG | + | chr5.2:22543399-22543418 | None:intergenic | 35.0% | |
| TGATCCAACATACATGATTC+GGG | - | chr5.2:22544157-22544176 | MS.gene027747:intron | 35.0% | |
| TGCTTCTATCCCTTAGTTAT+TGG | - | chr5.2:22542129-22542148 | MS.gene027747:intron | 35.0% | |
| TTATACTTCGCCCATGTATA+AGG | - | chr5.2:22544575-22544594 | MS.gene027747:intron | 35.0% | |
| TTCAATTTACATGGACCTCA+TGG | - | chr5.2:22543399-22543418 | MS.gene027747:CDS | 35.0% | |
| TTGAGGATGCGATATTACTT+CGG | + | chr5.2:22545337-22545356 | None:intergenic | 35.0% | |
| TTGATTGATTGCAGGAAAGA+GGG | - | chr5.2:22542692-22542711 | MS.gene027747:intron | 35.0% | |
| ! | AACAGAAACCTTGATTCGAA+AGG | + | chr5.2:22545180-22545199 | None:intergenic | 35.0% |
| ! | ATACTAGCGACTTTAGAAGT+AGG | + | chr5.2:22539874-22539893 | None:intergenic | 35.0% |
| ! | ATGCACATGATGATGATGAA+GGG | + | chr5.2:22539553-22539572 | None:intergenic | 35.0% |
| ! | ATTGGTTCTCAATTCTCCTA+TGG | - | chr5.2:22544301-22544320 | MS.gene027747:intron | 35.0% |
| ! | CGTATTTGGAACGTTTCTTT+AGG | - | chr5.2:22540010-22540029 | MS.gene027747:intron | 35.0% |
| ! | GAATCTTCTGTTTGGTTCAT+TGG | - | chr5.2:22540996-22541015 | MS.gene027747:intron | 35.0% |
| ! | GAGATTGTTGGTATTCCTTT+TGG | - | chr5.2:22542283-22542302 | MS.gene027747:intron | 35.0% |
| ! | GGAATTTTATGCACTGTACT+TGG | - | chr5.2:22544203-22544222 | MS.gene027747:intron | 35.0% |
| ! | GTTTTATGACTAGCGTAAAG+CGG | - | chr5.2:22541782-22541801 | MS.gene027747:intron | 35.0% |
| ! | GTTTTCAGTGCTGTAAAAGA+CGG | - | chr5.2:22542947-22542966 | MS.gene027747:intron | 35.0% |
| ! | TAATGACAGAGTGCTTCTTA+AGG | - | chr5.2:22540436-22540455 | MS.gene027747:intron | 35.0% |
| ! | TACAACAAACATTTTGCAGC+CGG | - | chr5.2:22545081-22545100 | MS.gene027747:intron | 35.0% |
| ! | TTGATTCGATGTTGTTGATG+CGG | - | chr5.2:22540506-22540525 | MS.gene027747:intron | 35.0% |
| ! | TTGTTGTTAAATGGTGGTCA+TGG | + | chr5.2:22540667-22540686 | None:intergenic | 35.0% |
| !! | AAGCAACTTGTTTTTCGGAA+AGG | - | chr5.2:22541622-22541641 | MS.gene027747:intron | 35.0% |
| !! | AGCAACTTGTTTTTCGGAAA+GGG | - | chr5.2:22541623-22541642 | MS.gene027747:intron | 35.0% |
| !! | CAAAGAGTTGATGGAAATAC+CGG | - | chr5.2:22542324-22542343 | MS.gene027747:intron | 35.0% |
| !! | TCTAGTTAGGGTGTTTTAGA+TGG | - | chr5.2:22540128-22540147 | MS.gene027747:intron | 35.0% |
| !!! | CTTGTTTTTGTGTGATGACA+GGG | - | chr5.2:22540346-22540365 | MS.gene027747:intron | 35.0% |
| !!! | CTTTTTTCTTTCACTTGGTC+AGG | - | chr5.2:22540066-22540085 | MS.gene027747:intron | 35.0% |
| !!! | TCTTGTTTTTGTGTGATGAC+AGG | - | chr5.2:22540345-22540364 | MS.gene027747:intron | 35.0% |
| AACTGTGGTAAATGGAACAC+TGG | - | chr5.2:22544717-22544736 | MS.gene027747:intron | 40.0% | |
| AATATCGCATCCTCAATTGG+TGG | - | chr5.2:22545341-22545360 | MS.gene027747:CDS | 40.0% | |
| ACCTGGAGTTAGTGAAATTG+TGG | - | chr5.2:22542529-22542548 | MS.gene027747:intron | 40.0% | |
| ACTAGATATGGACCCATAAG+TGG | + | chr5.2:22544969-22544988 | None:intergenic | 40.0% | |
| ACTTACATACCTCGGGAATT+AGG | + | chr5.2:22543298-22543317 | None:intergenic | 40.0% | |
| AGATGACTCAAAACTCCATG+AGG | + | chr5.2:22543417-22543436 | None:intergenic | 40.0% | |
| ATAGTGCATATCACGGAATC+GGG | - | chr5.2:22543195-22543214 | MS.gene027747:intron | 40.0% | |
| ATCAATTATGCCTACGTCTC+CGG | + | chr5.2:22545103-22545122 | None:intergenic | 40.0% | |
| ATGAAGTGAAATGCTGGACT+TGG | - | chr5.2:22541366-22541385 | MS.gene027747:intron | 40.0% | |
| ATGGAACACTGGAGTACAAT+AGG | - | chr5.2:22544728-22544747 | MS.gene027747:intron | 40.0% | |
| CAAAACATTCATCTCTCAGG+TGG | - | chr5.2:22542479-22542498 | MS.gene027747:intron | 40.0% | |
| CAAGGCTGATAAACTTCCAT+AGG | + | chr5.2:22544320-22544339 | None:intergenic | 40.0% | |
| CATAGTGCATATCACGGAAT+CGG | - | chr5.2:22543194-22543213 | MS.gene027747:intron | 40.0% | |
| CATTGATCCTGGCTGTAATT+GGG | - | chr5.2:22541522-22541541 | MS.gene027747:CDS | 40.0% | |
| CGGATCAAAGTGTGTGTTAT+TGG | - | chr5.2:22542967-22542986 | MS.gene027747:intron | 40.0% | |
| CTAATGACATCGTTAAGACC+AGG | + | chr5.2:22541922-22541941 | None:intergenic | 40.0% | |
| CTTCATCATCATCATGTGCA+TGG | - | chr5.2:22539552-22539571 | MS.gene027747:CDS | 40.0% | |
| GACATTACAGCACTATTGTG+AGG | - | chr5.2:22541171-22541190 | MS.gene027747:intron | 40.0% | |
| GATCAACATGCTCTTTGTGT+TGG | - | chr5.2:22542714-22542733 | MS.gene027747:intron | 40.0% | |
| GATGTTGTTGATGCGGAATA+TGG | - | chr5.2:22540513-22540532 | MS.gene027747:intron | 40.0% | |
| GCATATGGCATTTCCACTTA+TGG | - | chr5.2:22544953-22544972 | MS.gene027747:intron | 40.0% | |
| GGATATAGTGGCATTACAGT+AGG | - | chr5.2:22545276-22545295 | MS.gene027747:CDS | 40.0% | |
| GTGTATCGTGGAAAGAATAG+TGG | + | chr5.2:22541116-22541135 | None:intergenic | 40.0% | |
| GTTGATTGATTGCAGGAAAG+AGG | - | chr5.2:22542691-22542710 | MS.gene027747:intron | 40.0% | |
| TAGGCACATAGTGCATATCA+CGG | - | chr5.2:22543188-22543207 | MS.gene027747:intron | 40.0% | |
| TCAATTGTGGATCGCAGAAT+AGG | + | chr5.2:22544518-22544537 | None:intergenic | 40.0% | |
| TCCACAATTTCACTAACTCC+AGG | + | chr5.2:22542533-22542552 | None:intergenic | 40.0% | |
| TGAATGGAAAAGACGATGGT+TGG | + | chr5.2:22539610-22539629 | None:intergenic | 40.0% | |
| TGAGGTCTGCCAATAACTAA+GGG | + | chr5.2:22542141-22542160 | None:intergenic | 40.0% | |
| TGCGATATTACTTCGGTGAT+TGG | + | chr5.2:22545330-22545349 | None:intergenic | 40.0% | |
| TGCTAAACTTGGAGATATCG+GGG | - | chr5.2:22543673-22543692 | MS.gene027747:intron | 40.0% | |
| TGGAACACTGGAGTACAATA+GGG | - | chr5.2:22544729-22544748 | MS.gene027747:intron | 40.0% | |
| TGGGAATTATGATTCTGGTG+AGG | - | chr5.2:22540391-22540410 | MS.gene027747:intron | 40.0% | |
| TTGAGGTCTGCCAATAACTA+AGG | + | chr5.2:22542142-22542161 | None:intergenic | 40.0% | |
| TTGCTATGAATCCACTGCTA+CGG | + | chr5.2:22543238-22543257 | None:intergenic | 40.0% | |
| ! | CATGCACATGATGATGATGA+AGG | + | chr5.2:22539554-22539573 | None:intergenic | 40.0% |
| ! | CCATATGCATTTTGTGCTTG+GGG | + | chr5.2:22544941-22544960 | None:intergenic | 40.0% |
| ! | GCCATATGCATTTTGTGCTT+GGG | + | chr5.2:22544942-22544961 | None:intergenic | 40.0% |
| ! | TGCCATATGCATTTTGTGCT+TGG | + | chr5.2:22544943-22544962 | None:intergenic | 40.0% |
| !! | AACGCATAGAAGAAGCATCA+GGG | + | chr5.2:22539773-22539792 | None:intergenic | 40.0% |
| !! | TCGATATTGATTCTCGGCTT+TGG | - | chr5.2:22545227-22545246 | MS.gene027747:CDS | 40.0% |
| !!! | GAAAAGACGATGGTTGGTTT+TGG | + | chr5.2:22539604-22539623 | None:intergenic | 40.0% |
| !!! | GATGGTTGGTTTTGGAGTAA+CGG | + | chr5.2:22539596-22539615 | None:intergenic | 40.0% |
| AAATACGCCATTGCGGTATG+TGG | - | chr5.2:22540560-22540579 | MS.gene027747:intron | 45.0% | |
| AACATGCTCTTTGTGTTGGG+TGG | - | chr5.2:22542718-22542737 | MS.gene027747:intron | 45.0% | |
| ACACACGCAATTTGATTCCG+TGG | - | chr5.2:22539970-22539989 | MS.gene027747:intron | 45.0% | |
| ACTAATGATACCGATGCCTC+AGG | - | chr5.2:22543647-22543666 | MS.gene027747:intron | 45.0% | |
| AGCAGCAGTGTTGTCAATTG+TGG | + | chr5.2:22544531-22544550 | None:intergenic | 45.0% | |
| AGCCTATTAGGAGTTTCACG+CGG | - | chr5.2:22542503-22542522 | MS.gene027747:intron | 45.0% | |
| ATGACTAGCGTAAAGCGGTA+TGG | - | chr5.2:22541787-22541806 | MS.gene027747:intron | 45.0% | |
| ATGCAATCTTCCTTAGCCAG+TGG | - | chr5.2:22543257-22543276 | MS.gene027747:intron | 45.0% | |
| ATGGCTGCCTTTACTTCTTC+TGG | + | chr5.2:22541877-22541896 | None:intergenic | 45.0% | |
| CAATTTGATTCCGTGGTGTG+TGG | - | chr5.2:22539977-22539996 | MS.gene027747:intron | 45.0% | |
| CACTGTACTTGGACAGAATG+CGG | - | chr5.2:22544214-22544233 | MS.gene027747:intron | 45.0% | |
| CAGCAGATGTAGGTGATGAA+TGG | + | chr5.2:22541492-22541511 | None:intergenic | 45.0% | |
| CAGTCCTCCACAAGTAACAA+TGG | + | chr5.2:22541896-22541915 | None:intergenic | 45.0% | |
| CATCGATGCTTAACTTCGAC+CGG | - | chr5.2:22545384-22545403 | MS.gene027747:CDS | 45.0% | |
| CATTCATCACCTACATCTGC+TGG | - | chr5.2:22541490-22541509 | MS.gene027747:CDS | 45.0% | |
| CCCCAAGCACAAAATGCATA+TGG | - | chr5.2:22544938-22544957 | MS.gene027747:intron | 45.0% | |
| CCTCCATAGGAAGTTTGTGA+AGG | + | chr5.2:22540605-22540624 | None:intergenic | 45.0% | |
| CCTTCACAAACTTCCTATGG+AGG | - | chr5.2:22540602-22540621 | MS.gene027747:intron | 45.0% | |
| CGCTATAACGTAGCGAAGTT+TGG | - | chr5.2:22541085-22541104 | MS.gene027747:intron | 45.0% | |
| CGGGGTTTATATCCAACAAG+AGG | - | chr5.2:22543691-22543710 | MS.gene027747:intron | 45.0% | |
| CTAATGATACCGATGCCTCA+GGG | - | chr5.2:22543648-22543667 | MS.gene027747:intron | 45.0% | |
| CTCTTTGTGTTGGGTGGAAA+TGG | - | chr5.2:22542724-22542743 | MS.gene027747:intron | 45.0% | |
| CTGTTTGGATCCACCAATTG+AGG | + | chr5.2:22545354-22545373 | None:intergenic | 45.0% | |
| GAAAAACCGCGATAGCCAAA+AGG | + | chr5.2:22542301-22542320 | None:intergenic | 45.0% | |
| GATTCTGGTGAGGAATGGAA+TGG | - | chr5.2:22540401-22540420 | MS.gene027747:intron | 45.0% | |
| GCATACATCAATCTGTCCAC+TGG | + | chr5.2:22543276-22543295 | None:intergenic | 45.0% | |
| GCGTAAAGCGGTATGGTAAA+AGG | - | chr5.2:22541794-22541813 | MS.gene027747:intron | 45.0% | |
| GCTGTAATTGGGTGGAACAA+TGG | - | chr5.2:22541533-22541552 | MS.gene027747:intron | 45.0% | |
| GCTTTGGTATTGCAGGTTCA+TGG | - | chr5.2:22545243-22545262 | MS.gene027747:CDS | 45.0% | |
| GTGGTTGTTTGCTCCGTATT+TGG | - | chr5.2:22539996-22540015 | MS.gene027747:intron | 45.0% | |
| GTTGTTGATGCGGAATATGG+TGG | - | chr5.2:22540516-22540535 | MS.gene027747:intron | 45.0% | |
| TCCAAGTTTAGCATTCCCTG+AGG | + | chr5.2:22543666-22543685 | None:intergenic | 45.0% | |
| TCTTTGTGCTTCTTCAACCG+CGG | + | chr5.2:22543052-22543071 | None:intergenic | 45.0% | |
| TGATGTATGCCTAATTCCCG+AGG | - | chr5.2:22543286-22543305 | MS.gene027747:intron | 45.0% | |
| TGCAAATGCAATTCACGACG+AGG | - | chr5.2:22542759-22542778 | MS.gene027747:intron | 45.0% | |
| TGGATCCAAACAGTCGAATG+TGG | - | chr5.2:22545361-22545380 | MS.gene027747:CDS | 45.0% | |
| TGTCGAGCAAATGCTTCAGA+TGG | - | chr5.2:22544182-22544201 | MS.gene027747:intron | 45.0% | |
| TTGTGAAGGAATTCCCACCA+TGG | + | chr5.2:22540591-22540610 | None:intergenic | 45.0% | |
| TTTAGCATTCCCTGAGGCAT+CGG | + | chr5.2:22543660-22543679 | None:intergenic | 45.0% | |
| ! | AAATTAATGGGCCGTAGCAG+TGG | - | chr5.2:22543224-22543243 | MS.gene027747:intron | 45.0% |
| ! | AAGGCAGCCATTGTTACTTG+TGG | - | chr5.2:22541886-22541905 | MS.gene027747:CDS | 45.0% |
| ! | AGAATGGCATGGCGGTTTTT+GGG | + | chr5.2:22540632-22540651 | None:intergenic | 45.0% |
| ! | ATCAATCTGTCCACTGGCTA+AGG | + | chr5.2:22543270-22543289 | None:intergenic | 45.0% |
| ! | ATGATGATGATGAAGGGTGG+TGG | + | chr5.2:22539547-22539566 | None:intergenic | 45.0% |
| ! | ATTCTCGGCTTTGGTATTGC+AGG | - | chr5.2:22545236-22545255 | MS.gene027747:CDS | 45.0% |
| ! | CACATGATGATGATGAAGGG+TGG | + | chr5.2:22539550-22539569 | None:intergenic | 45.0% |
| ! | GCATTGATCCTGGCTGTAAT+TGG | - | chr5.2:22541521-22541540 | MS.gene027747:CDS | 45.0% |
| ! | GGTGCATTTGCTGGATATAG+TGG | - | chr5.2:22545264-22545283 | MS.gene027747:CDS | 45.0% |
| ! | GTGTCTTTTCAGAGCTGAAG+AGG | - | chr5.2:22539652-22539671 | MS.gene027747:CDS | 45.0% |
| ! | TTGATGCGGAATATGGTGGA+AGG | - | chr5.2:22540520-22540539 | MS.gene027747:intron | 45.0% |
| !! | CACAGATAGCGGAAAATAGC+AGG | + | chr5.2:22541211-22541230 | None:intergenic | 45.0% |
| !! | GAACGCATAGAAGAAGCATC+AGG | + | chr5.2:22539774-22539793 | None:intergenic | 45.0% |
| !! | GGTATTCCTTTTGGCTATCG+CGG | - | chr5.2:22542292-22542311 | MS.gene027747:intron | 45.0% |
| !! | TCAAATGAAGTCGGGTTGAC+CGG | + | chr5.2:22545406-22545425 | None:intergenic | 45.0% |
| !!! | AACTTTTGGCTTTGACACCG+CGG | - | chr5.2:22543032-22543051 | MS.gene027747:CDS | 45.0% |
| !!! | GTTTTTGGGACAACCTCCAT+AGG | + | chr5.2:22540618-22540637 | None:intergenic | 45.0% |
| CACGCCCGAATCATGTATGT+TGG | + | chr5.2:22544164-22544183 | None:intergenic | 50.0% | |
| CAGGTTCATGGTGCATTTGC+TGG | - | chr5.2:22545255-22545274 | MS.gene027747:CDS | 50.0% | |
| CGATGCCACATTCGACTGTT+TGG | + | chr5.2:22545369-22545388 | None:intergenic | 50.0% | |
| CTATTAGGAGTTTCACGCGG+AGG | - | chr5.2:22542506-22542525 | MS.gene027747:intron | 50.0% | |
| CTCCGCGTGAAACTCCTAAT+AGG | + | chr5.2:22542508-22542527 | None:intergenic | 50.0% | |
| CTTTGTAGGGTTCATCGAGC+TGG | - | chr5.2:22541826-22541845 | MS.gene027747:intron | 50.0% | |
| GAGCAAACAACCACACACCA+CGG | + | chr5.2:22539990-22540009 | None:intergenic | 50.0% | |
| GCCTCAGGGAATGCTAAACT+TGG | - | chr5.2:22543662-22543681 | MS.gene027747:intron | 50.0% | |
| GGTGGAAATGGTACACATGC+TGG | - | chr5.2:22542736-22542755 | MS.gene027747:intron | 50.0% | |
| GTGGCAGTTCATAGCCGTTT+CGG | - | chr5.2:22540937-22540956 | MS.gene027747:intron | 50.0% | |
| TGAAGGAATTCCCACCATGG+TGG | + | chr5.2:22540588-22540607 | None:intergenic | 50.0% | |
| TGATCCTGGCTGTAATTGGG+TGG | - | chr5.2:22541525-22541544 | MS.gene027747:CDS | 50.0% | |
| TGCCACTAAAACACTTCGCG+AGG | + | chr5.2:22540923-22540942 | None:intergenic | 50.0% | |
| TGGCAGTTCATAGCCGTTTC+GGG | - | chr5.2:22540938-22540957 | MS.gene027747:intron | 50.0% | |
| TGTTCCACCCAATTACAGCC+AGG | + | chr5.2:22541532-22541551 | None:intergenic | 50.0% | |
| ! | AGCTGTAGTTTGTGTGGCAG+AGG | - | chr5.2:22543464-22543483 | MS.gene027747:intron | 50.0% |
| ! | CAGAATGGCATGGCGGTTTT+TGG | + | chr5.2:22540633-22540652 | None:intergenic | 50.0% |
| ! | GCAGCCATTGTTACTTGTGG+AGG | - | chr5.2:22541889-22541908 | MS.gene027747:CDS | 50.0% |
| ! | GCTGTAGTTTGTGTGGCAGA+GGG | - | chr5.2:22543465-22543484 | MS.gene027747:intron | 50.0% |
| ! | GGGATCAGCTGTAGTTTGTG+TGG | - | chr5.2:22543458-22543477 | MS.gene027747:intron | 50.0% |
| !! | TGCCTCGCGAAGTGTTTTAG+TGG | - | chr5.2:22540918-22540937 | MS.gene027747:intron | 50.0% |
| ACTTGTGGAGGACTGTGTCC+TGG | - | chr5.2:22541901-22541920 | MS.gene027747:CDS | 55.0% | |
| CTCTCAGGTGGCAGCCTATT+AGG | - | chr5.2:22542491-22542510 | MS.gene027747:intron | 55.0% | |
| ! | AAGGGTGGTGGTGAGGTTAG+GGG | + | chr5.2:22539535-22539554 | None:intergenic | 55.0% |
| ! | CATTTTGCAGCCGGAGACGT+AGG | - | chr5.2:22545090-22545109 | MS.gene027747:intron | 55.0% |
| ! | GAAGGGTGGTGGTGAGGTTA+GGG | + | chr5.2:22539536-22539555 | None:intergenic | 55.0% |
| ! | GATGATGAAGGGTGGTGGTG+AGG | + | chr5.2:22539542-22539561 | None:intergenic | 55.0% |
| ! | TGAAGGGTGGTGGTGAGGTT+AGG | + | chr5.2:22539537-22539556 | None:intergenic | 55.0% |
| !! | ATGGTGCTGCCATGGCAGAA+TGG | + | chr5.2:22540648-22540667 | None:intergenic | 55.0% |
| ACCGCCATGCCATTCTGCCA+TGG | - | chr5.2:22540636-22540655 | MS.gene027747:intron | 60.0% | |
| CACTGAGCGCCAGCAGATGT+AGG | + | chr5.2:22541502-22541521 | None:intergenic | 60.0% | |
| GCCATGGCAGAATGGCATGG+CGG | + | chr5.2:22540640-22540659 | None:intergenic | 60.0% | |
| GCTGCCATGGCAGAATGGCA+TGG | + | chr5.2:22540643-22540662 | None:intergenic | 60.0% | |
| GTATGTGGCGCCACCATGGT+GGG | - | chr5.2:22540575-22540594 | MS.gene027747:intron | 60.0% | |
| GTTTGTGTGGCAGAGGGAGC+AGG | - | chr5.2:22543471-22543490 | MS.gene027747:intron | 60.0% | |
| ! | GGCGCTCAGTGCATTGATCC+TGG | - | chr5.2:22541511-22541530 | MS.gene027747:CDS | 60.0% |
| !! | TGGTGGTCATGGTGCTGCCA+TGG | + | chr5.2:22540656-22540675 | None:intergenic | 60.0% |
| GGAGTTTCACGCGGAGGACC+TGG | - | chr5.2:22542512-22542531 | MS.gene027747:intron | 65.0% | |
| GGTATGTGGCGCCACCATGG+TGG | - | chr5.2:22540574-22540593 | MS.gene027747:intron | 65.0% | |
| GGTGGCGCCACATACCGCAA+TGG | + | chr5.2:22540570-22540589 | None:intergenic | 65.0% | |
| TGCGGTATGTGGCGCCACCA+TGG | - | chr5.2:22540571-22540590 | MS.gene027747:intron | 65.0% | |
| TGTGGCAGAGGGAGCAGGAC+AGG | - | chr5.2:22543476-22543495 | MS.gene027747:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 22539513 | 22545425 | 22539513 | ID=MS.gene027747 |
| chr5.2 | mRNA | 22539513 | 22545425 | 22539513 | ID=MS.gene027747.t1;Parent=MS.gene027747 |
| chr5.2 | exon | 22545124 | 22545425 | 22545124 | ID=MS.gene027747.t1.exon1;Parent=MS.gene027747.t1 |
| chr5.2 | CDS | 22545124 | 22545425 | 22545124 | ID=cds.MS.gene027747.t1;Parent=MS.gene027747.t1 |
| chr5.2 | exon | 22544481 | 22544571 | 22544481 | ID=MS.gene027747.t1.exon2;Parent=MS.gene027747.t1 |
| chr5.2 | CDS | 22544481 | 22544571 | 22544481 | ID=cds.MS.gene027747.t1;Parent=MS.gene027747.t1 |
| chr5.2 | exon | 22543384 | 22543457 | 22543384 | ID=MS.gene027747.t1.exon3;Parent=MS.gene027747.t1 |
| chr5.2 | CDS | 22543384 | 22543457 | 22543384 | ID=cds.MS.gene027747.t1;Parent=MS.gene027747.t1 |
| chr5.2 | exon | 22542993 | 22543104 | 22542993 | ID=MS.gene027747.t1.exon4;Parent=MS.gene027747.t1 |
| chr5.2 | CDS | 22542993 | 22543104 | 22542993 | ID=cds.MS.gene027747.t1;Parent=MS.gene027747.t1 |
| chr5.2 | exon | 22542593 | 22542688 | 22542593 | ID=MS.gene027747.t1.exon5;Parent=MS.gene027747.t1 |
| chr5.2 | CDS | 22542593 | 22542688 | 22542593 | ID=cds.MS.gene027747.t1;Parent=MS.gene027747.t1 |
| chr5.2 | exon | 22542376 | 22542477 | 22542376 | ID=MS.gene027747.t1.exon6;Parent=MS.gene027747.t1 |
| chr5.2 | CDS | 22542376 | 22542477 | 22542376 | ID=cds.MS.gene027747.t1;Parent=MS.gene027747.t1 |
| chr5.2 | exon | 22542158 | 22542232 | 22542158 | ID=MS.gene027747.t1.exon7;Parent=MS.gene027747.t1 |
| chr5.2 | CDS | 22542158 | 22542232 | 22542158 | ID=cds.MS.gene027747.t1;Parent=MS.gene027747.t1 |
| chr5.2 | exon | 22541843 | 22541983 | 22541843 | ID=MS.gene027747.t1.exon8;Parent=MS.gene027747.t1 |
| chr5.2 | CDS | 22541843 | 22541983 | 22541843 | ID=cds.MS.gene027747.t1;Parent=MS.gene027747.t1 |
| chr5.2 | exon | 22541631 | 22541747 | 22541631 | ID=MS.gene027747.t1.exon9;Parent=MS.gene027747.t1 |
| chr5.2 | CDS | 22541631 | 22541747 | 22541631 | ID=cds.MS.gene027747.t1;Parent=MS.gene027747.t1 |
| chr5.2 | exon | 22541441 | 22541545 | 22541441 | ID=MS.gene027747.t1.exon10;Parent=MS.gene027747.t1 |
| chr5.2 | CDS | 22541441 | 22541545 | 22541441 | ID=cds.MS.gene027747.t1;Parent=MS.gene027747.t1 |
| chr5.2 | exon | 22541226 | 22541306 | 22541226 | ID=MS.gene027747.t1.exon11;Parent=MS.gene027747.t1 |
| chr5.2 | CDS | 22541226 | 22541306 | 22541226 | ID=cds.MS.gene027747.t1;Parent=MS.gene027747.t1 |
| chr5.2 | exon | 22540703 | 22540831 | 22540703 | ID=MS.gene027747.t1.exon12;Parent=MS.gene027747.t1 |
| chr5.2 | CDS | 22540703 | 22540831 | 22540703 | ID=cds.MS.gene027747.t1;Parent=MS.gene027747.t1 |
| chr5.2 | exon | 22539513 | 22539680 | 22539513 | ID=MS.gene027747.t1.exon13;Parent=MS.gene027747.t1 |
| chr5.2 | CDS | 22539513 | 22539680 | 22539513 | ID=cds.MS.gene027747.t1;Parent=MS.gene027747.t1 |
| Gene Sequence |
| Protein sequence |
