Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene40737.t1 | XP_013462064.1 | 99.6 | 451 | 2 | 0 | 1 | 451 | 1 | 451 | 4.00E-263 | 916.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene40737.t1 | Q94AA4 | 83.3 | 449 | 74 | 1 | 3 | 451 | 2 | 449 | 6.3e-225 | 781.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene40737.t1 | A0A072V223 | 99.6 | 451 | 2 | 0 | 1 | 451 | 1 | 451 | 2.9e-263 | 916.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene052015 | MS.gene40737 | 0.833516 | 5.10E-56 | -1.69E-46 |
MS.gene053108 | MS.gene40737 | 0.826418 | 2.74E-54 | -1.69E-46 |
MS.gene053421 | MS.gene40737 | 0.857127 | 2.02E-62 | -1.69E-46 |
MS.gene05470 | MS.gene40737 | -0.812202 | 4.77E-51 | -1.69E-46 |
MS.gene055577 | MS.gene40737 | -0.804701 | 1.90E-49 | -1.69E-46 |
MS.gene05914 | MS.gene40737 | -0.826372 | 2.81E-54 | -1.69E-46 |
MS.gene060602 | MS.gene40737 | 0.816103 | 6.57E-52 | -1.69E-46 |
MS.gene061226 | MS.gene40737 | 0.815395 | 9.45E-52 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene40737 | MS.gene027747 | PPI |
MS.gene030334 | MS.gene40737 | PPI |
MS.gene40737 | MS.gene042072 | PPI |
MS.gene40737 | MS.gene95074 | PPI |
MS.gene40737 | MS.gene86239 | PPI |
MS.gene44272 | MS.gene40737 | PPI |
MS.gene40737 | MS.gene75027 | PPI |
MS.gene40737 | MS.gene012768 | PPI |
MS.gene66384 | MS.gene40737 | PPI |
MS.gene40737 | MS.gene067909 | PPI |
MS.gene065196 | MS.gene40737 | PPI |
MS.gene40737 | MS.gene43456 | PPI |
MS.gene40737 | MS.gene008899 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene40737.t1 | MTR_3g110395 | 99.557 | 451 | 2 | 0 | 1 | 451 | 1 | 451 | 0.0 | 934 |
MS.gene40737.t1 | MTR_6g090130 | 84.459 | 444 | 69 | 0 | 8 | 451 | 4 | 447 | 0.0 | 799 |
MS.gene40737.t1 | MTR_8g102190 | 82.183 | 449 | 79 | 1 | 4 | 451 | 3 | 451 | 0.0 | 786 |
MS.gene40737.t1 | MTR_2g100710 | 77.880 | 434 | 94 | 2 | 19 | 451 | 18 | 450 | 0.0 | 706 |
MS.gene40737.t1 | MTR_1g090300 | 73.288 | 438 | 117 | 0 | 14 | 451 | 80 | 517 | 0.0 | 694 |
MS.gene40737.t1 | MTR_8g102190 | 81.402 | 371 | 68 | 1 | 4 | 373 | 3 | 373 | 0.0 | 639 |
MS.gene40737.t1 | MTR_8g102190 | 82.254 | 355 | 62 | 1 | 4 | 357 | 3 | 357 | 0.0 | 618 |
MS.gene40737.t1 | MTR_2g100710 | 78.235 | 340 | 73 | 1 | 19 | 357 | 18 | 357 | 0.0 | 559 |
MS.gene40737.t1 | MTR_4g134290 | 54.943 | 435 | 186 | 5 | 21 | 451 | 27 | 455 | 1.37e-172 | 492 |
MS.gene40737.t1 | MTR_8g069040 | 53.867 | 375 | 165 | 4 | 79 | 451 | 158 | 526 | 1.33e-133 | 395 |
MS.gene40737.t1 | MTR_5g032570 | 52.267 | 375 | 171 | 4 | 79 | 451 | 162 | 530 | 3.63e-131 | 389 |
MS.gene40737.t1 | MTR_2g100670 | 59.341 | 91 | 22 | 2 | 268 | 357 | 31 | 107 | 2.82e-24 | 104 |
MS.gene40737.t1 | MTR_2g066850 | 70.270 | 74 | 21 | 1 | 167 | 240 | 389 | 461 | 1.10e-23 | 105 |
MS.gene40737.t1 | MTR_4g062050 | 64.815 | 54 | 19 | 0 | 356 | 409 | 8 | 61 | 8.40e-17 | 78.6 |
MS.gene40737.t1 | MTR_4g079180 | 76.316 | 38 | 9 | 0 | 372 | 409 | 56 | 93 | 9.34e-12 | 62.0 |
MS.gene40737.t1 | MTR_2g025020 | 26.842 | 190 | 132 | 3 | 97 | 279 | 98 | 287 | 1.36e-11 | 67.0 |
MS.gene40737.t1 | MTR_4g132700 | 27.083 | 192 | 129 | 3 | 97 | 279 | 102 | 291 | 2.71e-11 | 65.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene40737.t1 | AT4G26270 | 83.370 | 451 | 73 | 2 | 1 | 451 | 1 | 449 | 0.0 | 793 |
MS.gene40737.t1 | AT4G29220 | 82.965 | 452 | 74 | 2 | 1 | 451 | 1 | 450 | 0.0 | 782 |
MS.gene40737.t1 | AT4G32840 | 82.262 | 451 | 77 | 1 | 1 | 451 | 1 | 448 | 0.0 | 781 |
MS.gene40737.t1 | AT5G56630 | 82.705 | 451 | 75 | 3 | 1 | 451 | 1 | 448 | 0.0 | 777 |
MS.gene40737.t1 | AT5G61580 | 75.917 | 436 | 105 | 0 | 16 | 451 | 66 | 501 | 0.0 | 715 |
MS.gene40737.t1 | AT5G61580 | 75.917 | 436 | 104 | 1 | 16 | 451 | 66 | 500 | 0.0 | 709 |
MS.gene40737.t1 | AT5G47810 | 55.288 | 416 | 183 | 2 | 39 | 451 | 21 | 436 | 1.02e-166 | 477 |
MS.gene40737.t1 | AT2G22480 | 54.133 | 375 | 164 | 4 | 79 | 451 | 166 | 534 | 3.02e-137 | 405 |
MS.gene40737.t1 | AT4G04040 | 27.670 | 206 | 141 | 4 | 82 | 279 | 86 | 291 | 2.07e-12 | 69.7 |
MS.gene40737.t1 | AT1G12000 | 26.531 | 196 | 125 | 3 | 97 | 279 | 100 | 289 | 2.98e-11 | 65.9 |
Find 110 sgRNAs with CRISPR-Local
Find 342 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TACTTCAAGATGTTGGTTTA+TGG | 0.202635 | 3.3:+91368041 | MS.gene40737:CDS |
TTCAACATGTGCTGCATTAA+TGG | 0.206437 | 3.3:-91367571 | None:intergenic |
GAATCGTTCCTCCACGCTTA+TGG | 0.286336 | 3.3:-91365631 | None:intergenic |
TACCGGGATGTCATTATCTA+TGG | 0.300219 | 3.3:-91367367 | None:intergenic |
TGGATGTCATTGACCACTTT+AGG | 0.304572 | 3.3:-91365611 | None:intergenic |
TTGGTTCAGGTTTATATCAT+TGG | 0.329391 | 3.3:+91365871 | MS.gene40737:intron |
TGTTTCCAGAAGCATCCTTC+TGG | 0.336049 | 3.3:-91368015 | None:intergenic |
CAGGCAGTACTTTGTGCATA+TGG | 0.344963 | 3.3:+91364226 | MS.gene40737:intron |
CTTGCTCAGAGTGCAGTTCA+TGG | 0.350658 | 3.3:+91368843 | MS.gene40737:CDS |
ACCCTTCCCTTCAAGGTAGA+AGG | 0.353106 | 3.3:-91367882 | None:intergenic |
GGTGCAATGGCTGGGTATAC+TGG | 0.356523 | 3.3:+91368864 | MS.gene40737:CDS |
CACAACGTTGTTCATCTTCT+CGG | 0.359054 | 3.3:-91369254 | None:intergenic |
AAGCGTGGAGGAACGATTCT+TGG | 0.367428 | 3.3:+91365635 | MS.gene40737:CDS |
GGATTAGATCGAAGTGGATT+AGG | 0.375412 | 3.3:-91364083 | None:intergenic |
GCCATTGTTCTTAAATATAT+AGG | 0.384279 | 3.3:+91368666 | MS.gene40737:CDS |
AAAGTCCACCCTTCCCTTCA+AGG | 0.386654 | 3.3:-91367889 | None:intergenic |
ATCTAGTAACTTACGTTGAA+TGG | 0.388848 | 3.3:-91368927 | None:intergenic |
TTGGGTTTCAAAAGCTTGGC+TGG | 0.389822 | 3.3:-91369318 | None:intergenic |
CATTGGTGTTGTAAAGCTAA+TGG | 0.401351 | 3.3:+91367614 | MS.gene40737:CDS |
CGTCGAAAATGAACACCTCT+TGG | 0.402495 | 3.3:-91364796 | None:intergenic |
CCTGATTAATTCCCCGATCC+TGG | 0.409242 | 3.3:-91365703 | None:intergenic |
TAGGTTATCGACAGGTCCTT+TGG | 0.411323 | 3.3:+91367516 | MS.gene40737:intron |
AGTTGACAGCATCCAGGATC+GGG | 0.419001 | 3.3:+91365691 | MS.gene40737:CDS |
TTTACACAGGGTGGTTATAG+AGG | 0.429359 | 3.3:+91365557 | MS.gene40737:intron |
GCAGTTCATGGTGCAATGGC+TGG | 0.433123 | 3.3:+91368855 | MS.gene40737:CDS |
CCAGGATCGGGGAATTAATC+AGG | 0.433988 | 3.3:+91365703 | MS.gene40737:CDS |
GGGTATACTGGATTCACTGC+TGG | 0.434313 | 3.3:+91368876 | MS.gene40737:CDS |
TAGGTTGTTGTTCACAAAGA+TGG | 0.437604 | 3.3:+91364772 | MS.gene40737:intron |
GAGTCACCCTTCTACCTTGA+AGG | 0.442197 | 3.3:+91367875 | MS.gene40737:CDS |
CAGATCCAACTTACATGATC+CGG | 0.445131 | 3.3:+91368778 | MS.gene40737:intron |
CTGGCCTCAACACTGTCATA+AGG | 0.454068 | 3.3:+91364988 | MS.gene40737:CDS |
ATGGACCAGAAGGATGCTTC+TGG | 0.455785 | 3.3:+91368010 | MS.gene40737:CDS |
TGGCCTCAACACTGTCATAA+GGG | 0.467515 | 3.3:+91364989 | MS.gene40737:CDS |
TTTATGAATTTATTACGAAA+AGG | 0.468687 | 3.3:+91367909 | MS.gene40737:CDS |
GTTTATATCATTGGAGGAGA+TGG | 0.470046 | 3.3:+91365880 | MS.gene40737:CDS |
AACAAGCTACTTCAAGATGT+TGG | 0.473799 | 3.3:+91368034 | MS.gene40737:CDS |
GGATGACACCGTTCCTCAAA+AGG | 0.474449 | 3.3:+91364247 | MS.gene40737:CDS |
CTTATGACAGTGTTGAGGCC+AGG | 0.477976 | 3.3:-91364987 | None:intergenic |
TTCACTGCTGGACTTGTGAA+TGG | 0.485445 | 3.3:+91368888 | MS.gene40737:CDS |
AGCGTGGAGGAACGATTCTT+GGG | 0.486903 | 3.3:+91365636 | MS.gene40737:CDS |
ACGTGCAGGACCTCGGCAAA+AGG | 0.487268 | 3.3:+91364816 | MS.gene40737:CDS |
TACTTAACAACCGAGTAAGC+TGG | 0.487814 | 3.3:-91364104 | None:intergenic |
GCTGAAAGAAAGTGGACATA+TGG | 0.488751 | 3.3:+91367931 | MS.gene40737:CDS |
GGTCTGAAAGTAGCAATTGC+TGG | 0.489039 | 3.3:+91367333 | MS.gene40737:CDS |
ACATGTGGTGGTCTCTGCCC+TGG | 0.490445 | 3.3:+91364969 | MS.gene40737:CDS |
TCAAGGTAGAAGGGTGACTC+TGG | 0.491308 | 3.3:-91367872 | None:intergenic |
CATTACTTTAACTCCTAAAG+TGG | 0.494917 | 3.3:+91365598 | MS.gene40737:CDS |
AAGCTAATGGGTCGTTATAG+TGG | 0.497189 | 3.3:+91367627 | MS.gene40737:CDS |
TCGATCTAATCCAGCTTACT+CGG | 0.498259 | 3.3:+91364094 | MS.gene40737:CDS |
GTTCAGGTTTATATCATTGG+AGG | 0.500202 | 3.3:+91365874 | MS.gene40737:intron |
GTCGAAAATGAACACCTCTT+GGG | 0.504803 | 3.3:-91364795 | None:intergenic |
TTATGACAGTGTTGAGGCCA+GGG | 0.506099 | 3.3:-91364986 | None:intergenic |
AAAATCGTCCATGGCGACGC+TGG | 0.506999 | 3.3:+91363918 | MS.gene40737:CDS |
ATGCATTGCTTGGAATTGCC+CGG | 0.523008 | 3.3:-91368797 | None:intergenic |
ATTGGTGTTGTAAAGCTAAT+GGG | 0.524626 | 3.3:+91367615 | MS.gene40737:CDS |
TGTTTGATTAGGTTATCGAC+AGG | 0.526843 | 3.3:+91367508 | MS.gene40737:intron |
ACACTGTCTGATGCATTGCT+TGG | 0.537565 | 3.3:-91368807 | None:intergenic |
ATGGATATCTCATAAGATCA+AGG | 0.539762 | 3.3:+91368060 | MS.gene40737:CDS |
ACCCTTCTACCTTGAAGGGA+AGG | 0.543653 | 3.3:+91367880 | MS.gene40737:CDS |
AGGAGCTGCTGTGATTTATG+AGG | 0.550657 | 3.3:+91365912 | MS.gene40737:CDS |
CCCTTCCCTTCAAGGTAGAA+GGG | 0.551850 | 3.3:-91367881 | None:intergenic |
TAGTTGACAGCATCCAGGAT+CGG | 0.553341 | 3.3:+91365690 | MS.gene40737:CDS |
ATTGCCCGGATCATGTAAGT+TGG | 0.554329 | 3.3:-91368783 | None:intergenic |
ACGAAAAGGCTGAAAGAAAG+TGG | 0.554398 | 3.3:+91367923 | MS.gene40737:CDS |
CAAGATAGTTGACAGCATCC+AGG | 0.555399 | 3.3:+91365685 | MS.gene40737:CDS |
ACGATTCTTGGGACATCCCG+AGG | 0.556156 | 3.3:+91365647 | MS.gene40737:CDS |
ATAGTTATAGCTGAGGGAGC+AGG | 0.560671 | 3.3:+91367956 | MS.gene40737:CDS |
AGATCCAACTTACATGATCC+GGG | 0.560914 | 3.3:+91368779 | MS.gene40737:intron |
TGTGGTCTTTCTTACATGTA+CGG | 0.563095 | 3.3:+91365020 | MS.gene40737:CDS |
AACCATAGATAATGACATCC+CGG | 0.563261 | 3.3:+91367365 | MS.gene40737:CDS |
CATGCAAGACATGGACCAGA+AGG | 0.565078 | 3.3:+91368000 | MS.gene40737:CDS |
CACTTTAGGAGTTAAAGTAA+TGG | 0.565776 | 3.3:-91365597 | None:intergenic |
TACGGTGTCGACAAAGTCCT+CGG | 0.575472 | 3.3:+91365038 | MS.gene40737:CDS |
CGATTCTTGGGACATCCCGA+GGG | 0.578094 | 3.3:+91365648 | MS.gene40737:CDS |
GTATGTAACCAGCGTCGCCA+TGG | 0.578458 | 3.3:-91363926 | None:intergenic |
TACAGAAAGCATGCAAGACA+TGG | 0.580338 | 3.3:+91367991 | MS.gene40737:CDS |
AGTCACCCTTCTACCTTGAA+GGG | 0.585876 | 3.3:+91367876 | MS.gene40737:CDS |
CAGTTCATGGTGCAATGGCT+GGG | 0.590436 | 3.3:+91368856 | MS.gene40737:CDS |
ACCTATATATTTAAGAACAA+TGG | 0.594094 | 3.3:-91368667 | None:intergenic |
CCCTTCTACCTTGAAGGGAA+GGG | 0.594930 | 3.3:+91367881 | MS.gene40737:CDS |
TTCTACCTTGAAGGGAAGGG+TGG | 0.595567 | 3.3:+91367884 | MS.gene40737:CDS |
TTGTGATTACTGACAGAATG+TGG | 0.596485 | 3.3:+91369272 | MS.gene40737:CDS |
AGGAAGATTTGGAACGTAGT+CGG | 0.608157 | 3.3:-91363970 | None:intergenic |
GTCAATGACATCCATAAGCG+TGG | 0.610080 | 3.3:+91365620 | MS.gene40737:CDS |
TTCTTGGGACATCCCGAGGG+GGG | 0.614995 | 3.3:+91365651 | MS.gene40737:CDS |
GAAAGTGTTGAGAATGGCAT+TGG | 0.625093 | 3.3:+91367597 | MS.gene40737:CDS |
TTTCCCTTATGACAGTGTTG+AGG | 0.626794 | 3.3:-91364992 | None:intergenic |
GAGTGCAGTTCATGGTGCAA+TGG | 0.628896 | 3.3:+91368851 | MS.gene40737:CDS |
ATTCTTGGGACATCCCGAGG+GGG | 0.629130 | 3.3:+91365650 | MS.gene40737:CDS |
TCACAGATGAAAATCGTCCA+TGG | 0.630554 | 3.3:+91363909 | MS.gene40737:CDS |
ATGGTCATAGTTATAGCTGA+GGG | 0.632087 | 3.3:+91367950 | MS.gene40737:CDS |
TACTCTTGCTAGTAGAGATG+TGG | 0.632402 | 3.3:+91367835 | MS.gene40737:CDS |
AACTGCGGTATCAAAACCAA+AGG | 0.633694 | 3.3:-91367532 | None:intergenic |
TATGGTCATAGTTATAGCTG+AGG | 0.638112 | 3.3:+91367949 | MS.gene40737:CDS |
GGAACGTAGTCGGAGAGATG+AGG | 0.638776 | 3.3:-91363960 | None:intergenic |
GAAGCTGAAAGTGTTGAGAA+TGG | 0.642124 | 3.3:+91367591 | MS.gene40737:CDS |
TTATCATACAGGAAGTTAGA+CGG | 0.646291 | 3.3:+91367307 | MS.gene40737:intron |
TAAGCTGGATTAGATCGAAG+TGG | 0.651196 | 3.3:-91364089 | None:intergenic |
GCTTGTATCGTCACATGTGG+TGG | 0.651363 | 3.3:+91364957 | MS.gene40737:CDS |
AGCCACTCACATCTATGCCG+AGG | 0.660208 | 3.3:-91365055 | None:intergenic |
GTTGACAGCATCCAGGATCG+GGG | 0.664069 | 3.3:+91365692 | MS.gene40737:CDS |
GTTCACAAAGATGGCCCAAG+AGG | 0.667902 | 3.3:+91364781 | MS.gene40737:CDS |
GATTCTTGGGACATCCCGAG+GGG | 0.672975 | 3.3:+91365649 | MS.gene40737:CDS |
GGAGGAGATGGAACACAGCG+AGG | 0.687653 | 3.3:+91365892 | MS.gene40737:CDS |
ATACAGGAAGTTAGACGGCG+AGG | 0.691856 | 3.3:+91367312 | MS.gene40737:intron |
ACGTTGAGCCTCCTCAACTG+CGG | 0.700198 | 3.3:-91367547 | None:intergenic |
GTTGCTTGTATCGTCACATG+TGG | 0.709509 | 3.3:+91364954 | MS.gene40737:CDS |
TGTGATTACTGACAGAATGT+GGG | 0.717274 | 3.3:+91369273 | MS.gene40737:CDS |
GTCATAAGGGAAATTGTGTG+TGG | 0.728717 | 3.3:+91365002 | MS.gene40737:CDS |
AATGACATCCATAAGCGTGG+AGG | 0.732879 | 3.3:+91365623 | MS.gene40737:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATGAAATAATAAATGATTT+GGG | - | chr3.3:91366895-91366914 | None:intergenic | 10.0% |
!! | ATCTTAGAAAAATAAAAAAT+TGG | - | chr3.3:91369178-91369197 | None:intergenic | 10.0% |
!! | GTAAATAAATATAAAAAAAC+TGG | - | chr3.3:91368523-91368542 | None:intergenic | 10.0% |
! | CCCCCCCCCCCCCCCCCCCC+CGG | + | chr3.3:91366574-91366593 | MS.gene40737:intron | 100.0% |
! | CCCCCCCCCCCCCCCCCCCC+GGG | + | chr3.3:91366574-91366593 | MS.gene40737:intron | 100.0% |
! | CCCGGGGGGGGGGGGGGGGG+GGG | - | chr3.3:91366581-91366600 | None:intergenic | 100.0% |
! | CCGGGGGGGGGGGGGGGGGG+GGG | - | chr3.3:91366580-91366599 | None:intergenic | 100.0% |
! | CGGGGGGGGGGGGGGGGGGG+GGG | - | chr3.3:91366579-91366598 | None:intergenic | 100.0% |
! | GGGGGGGGGGGGGGGGGGCG+CGG | - | chr3.3:91366572-91366591 | None:intergenic | 100.0% |
! | GGGGGGGGGGGGGGGGGGGG+GGG | - | chr3.3:91366574-91366593 | None:intergenic | 100.0% |
!! | AAGTTGAATGTTTATTAAAA+GGG | - | chr3.3:91368609-91368628 | None:intergenic | 15.0% |
!! | ATAAAAATTAAGATGTAGAA+TGG | + | chr3.3:91368319-91368338 | MS.gene40737:intron | 15.0% |
!! | ATGAAATAATAAATGATTTG+GGG | - | chr3.3:91366894-91366913 | None:intergenic | 15.0% |
!! | ATTGAAATTTGAATATTACA+AGG | + | chr3.3:91366979-91366998 | MS.gene40737:intron | 15.0% |
!! | GAATGAAATAATAAATGATT+TGG | - | chr3.3:91366896-91366915 | None:intergenic | 15.0% |
!! | TAAAAAAACTAATCCAAATA+GGG | - | chr3.3:91368282-91368301 | None:intergenic | 15.0% |
!! | TAATAGAATATTCCTTTATT+TGG | + | chr3.3:91365957-91365976 | MS.gene40737:intron | 15.0% |
!! | TACAGAATTCAAAATTAATT+TGG | - | chr3.3:91366153-91366172 | None:intergenic | 15.0% |
!! | TCCTAAAAATTAAAAAGAAA+CGG | - | chr3.3:91366798-91366817 | None:intergenic | 15.0% |
!! | TTAAAAGTAGTTATGATTAA+AGG | + | chr3.3:91364488-91364507 | MS.gene40737:intron | 15.0% |
!! | TTTATGAATTTATTACGAAA+AGG | + | chr3.3:91367909-91367928 | MS.gene40737:CDS | 15.0% |
!!! | ATTTTTGTAAATTATTCTTG+GGG | + | chr3.3:91365209-91365228 | MS.gene40737:intron | 15.0% |
!!! | CATTTTTGTAAATTATTCTT+GGG | + | chr3.3:91365208-91365227 | MS.gene40737:intron | 15.0% |
!!! | TCATTTTTGTAAATTATTCT+TGG | + | chr3.3:91365207-91365226 | MS.gene40737:intron | 15.0% |
!!! | TTATGCTATATAATTTGTTT+AGG | - | chr3.3:91368158-91368177 | None:intergenic | 15.0% |
!! | AAAAAAACTAATCCAAATAG+GGG | - | chr3.3:91368281-91368300 | None:intergenic | 20.0% |
!! | AAAAGTAGAAAATCAACATT+TGG | - | chr3.3:91364198-91364217 | None:intergenic | 20.0% |
!! | AATTTGAATATTACAAGGAA+CGG | + | chr3.3:91366984-91367003 | MS.gene40737:intron | 20.0% |
!! | ACCTATATATTTAAGAACAA+TGG | - | chr3.3:91368670-91368689 | None:intergenic | 20.0% |
!! | ATAAAAAATTGGATGCAAAT+AGG | - | chr3.3:91369167-91369186 | None:intergenic | 20.0% |
!! | CAAAATAGAAAACATATGTA+CGG | - | chr3.3:91367213-91367232 | None:intergenic | 20.0% |
!! | CAAATGTAACTGAAAAAATT+GGG | - | chr3.3:91364016-91364035 | None:intergenic | 20.0% |
!! | CTAAAAAAACTAATCCAAAT+AGG | - | chr3.3:91368283-91368302 | None:intergenic | 20.0% |
!! | TATAATAATGTGTACTAAGT+TGG | - | chr3.3:91365254-91365273 | None:intergenic | 20.0% |
!! | TGTTATTGATATATATCAAG+TGG | + | chr3.3:91369002-91369021 | MS.gene40737:intron | 20.0% |
!! | TTGAAAAGAAGAAAAAACAA+GGG | - | chr3.3:91366430-91366449 | None:intergenic | 20.0% |
!! | TTTGAAAAGAAGAAAAAACA+AGG | - | chr3.3:91366431-91366450 | None:intergenic | 20.0% |
!!! | AATATTTTAGTCATTACGTT+TGG | - | chr3.3:91367729-91367748 | None:intergenic | 20.0% |
!!! | CAAGTTGAATGTTTATTAAA+AGG | - | chr3.3:91368610-91368629 | None:intergenic | 20.0% |
!!! | CTGAATGTTTGTTATTATTA+CGG | + | chr3.3:91364657-91364676 | MS.gene40737:intron | 20.0% |
!!! | TATATAATTTGTTTAGGAAG+AGG | - | chr3.3:91368152-91368171 | None:intergenic | 20.0% |
!!! | TCCGTTTCTTTTTAATTTTT+AGG | + | chr3.3:91366794-91366813 | MS.gene40737:intron | 20.0% |
!!! | TTTAAAGTAACAAACATGAA+TGG | - | chr3.3:91364473-91364492 | None:intergenic | 20.0% |
!!! | TTTTTTTTTTCGTGTTGTAA+TGG | + | chr3.3:91367778-91367797 | MS.gene40737:intron | 20.0% |
! | AAAACGAACTTGATTTATAC+AGG | - | chr3.3:91369101-91369120 | None:intergenic | 25.0% |
! | AAATATTGAAAAGGAACAGT+GGG | + | chr3.3:91367050-91367069 | MS.gene40737:intron | 25.0% |
! | AATGAAGAAAATGAACAAAC+AGG | - | chr3.3:91364303-91364322 | None:intergenic | 25.0% |
! | ACACATTATTATATGTTCTC+TGG | + | chr3.3:91365261-91365280 | MS.gene40737:intron | 25.0% |
! | ACTTCAGTAGATATATAACA+AGG | - | chr3.3:91366740-91366759 | None:intergenic | 25.0% |
! | ATACAACGAATAGATCAAAA+TGG | - | chr3.3:91368717-91368736 | None:intergenic | 25.0% |
! | ATTGAACATAATCGTGAATT+TGG | + | chr3.3:91366761-91366780 | MS.gene40737:intron | 25.0% |
! | CACAAAAAATACTACATACA+TGG | + | chr3.3:91368463-91368482 | MS.gene40737:intron | 25.0% |
! | CATTTAAATAAGTTACTGAC+AGG | + | chr3.3:91366269-91366288 | MS.gene40737:intron | 25.0% |
! | CCATAAAAGTGAAATTTGAA+TGG | + | chr3.3:91366642-91366661 | MS.gene40737:intron | 25.0% |
! | GCAAATGTAACTGAAAAAAT+TGG | - | chr3.3:91364017-91364036 | None:intergenic | 25.0% |
! | GCCATTGTTCTTAAATATAT+AGG | + | chr3.3:91368666-91368685 | MS.gene40737:CDS | 25.0% |
! | GTAAGAAGACTTTATAATGA+CGG | + | chr3.3:91364562-91364581 | MS.gene40737:intron | 25.0% |
! | GTAGATATATAACAAGGAAA+CGG | - | chr3.3:91366734-91366753 | None:intergenic | 25.0% |
! | TAAAATTAGATATAGCTCAG+TGG | - | chr3.3:91365541-91365560 | None:intergenic | 25.0% |
! | TACCTATACAACAATTTACT+AGG | - | chr3.3:91364913-91364932 | None:intergenic | 25.0% |
! | TCTTCACAATACAATTGATT+AGG | + | chr3.3:91366123-91366142 | MS.gene40737:intron | 25.0% |
! | TTCAAAAATGGAAAAGGATA+TGG | - | chr3.3:91365328-91365347 | None:intergenic | 25.0% |
!! | AGCTATATCTAATTTTACAC+AGG | + | chr3.3:91365544-91365563 | MS.gene40737:intron | 25.0% |
!! | ATATCAATGTTAACTTGAGT+AGG | + | chr3.3:91365812-91365831 | MS.gene40737:intron | 25.0% |
!! | ATGTCATTATCTATGGTTTT+TGG | - | chr3.3:91367363-91367382 | None:intergenic | 25.0% |
!! | GCATTTGAAGTTTAAGATTA+AGG | - | chr3.3:91366708-91366727 | None:intergenic | 25.0% |
!! | GCTATATCTAATTTTACACA+GGG | + | chr3.3:91365545-91365564 | MS.gene40737:intron | 25.0% |
!! | TATTTAGTATCTTCTGAAAG+TGG | - | chr3.3:91368423-91368442 | None:intergenic | 25.0% |
!! | TGTATATGATTTTCACTTGA+AGG | - | chr3.3:91366684-91366703 | None:intergenic | 25.0% |
!! | TTGGAAACTTTTGTAGAATA+TGG | - | chr3.3:91365750-91365769 | None:intergenic | 25.0% |
!! | TTTGGAATAACTAACACATT+TGG | - | chr3.3:91364180-91364199 | None:intergenic | 25.0% |
!!! | ACAAAATTTGTTGATCATCT+TGG | - | chr3.3:91366834-91366853 | None:intergenic | 25.0% |
!!! | AGTATTTTTTGTGCATTGAA+TGG | - | chr3.3:91368456-91368475 | None:intergenic | 25.0% |
!!! | CCATTCAAATTTCACTTTTA+TGG | - | chr3.3:91366645-91366664 | None:intergenic | 25.0% |
!!! | GATTAGTTTTTTTAGCAGAT+GGG | + | chr3.3:91368288-91368307 | MS.gene40737:intron | 25.0% |
!!! | TATCCTTTTCCATTTTTGAA+AGG | + | chr3.3:91365328-91365347 | MS.gene40737:intron | 25.0% |
!!! | TTCAATTACTTTTGTCCATT+TGG | - | chr3.3:91365359-91365378 | None:intergenic | 25.0% |
!!! | TTTCTACTTTTTGTGATTTC+AGG | + | chr3.3:91364207-91364226 | MS.gene40737:intron | 25.0% |
AAAGAAGAAAAAACAAGGGA+AGG | - | chr3.3:91366426-91366445 | None:intergenic | 30.0% | |
AAGAAGAAAAAACAAGGGAA+GGG | - | chr3.3:91366425-91366444 | None:intergenic | 30.0% | |
AATTAAAAAGAAACGGAGAG+TGG | - | chr3.3:91366791-91366810 | None:intergenic | 30.0% | |
AATTGACTGTTCTTGATAGA+TGG | - | chr3.3:91368571-91368590 | None:intergenic | 30.0% | |
ACTAACTGATGCTTACATTA+AGG | + | chr3.3:91364613-91364632 | MS.gene40737:intron | 30.0% | |
AGAAAGAGAGAGAAAAATAC+AGG | - | chr3.3:91363993-91364012 | None:intergenic | 30.0% | |
AGTTGCATTTCTTGATTCAT+TGG | + | chr3.3:91365510-91365529 | MS.gene40737:intron | 30.0% | |
ATATATAACAAGGAAACGGA+AGG | - | chr3.3:91366730-91366749 | None:intergenic | 30.0% | |
ATCTAGTAACTTACGTTGAA+TGG | - | chr3.3:91368930-91368949 | None:intergenic | 30.0% | |
ATGCAACTATGATAATCTAC+AGG | - | chr3.3:91368493-91368512 | None:intergenic | 30.0% | |
ATGCCTTTCAAAAATGGAAA+AGG | - | chr3.3:91365334-91365353 | None:intergenic | 30.0% | |
ATGGATATCTCATAAGATCA+AGG | + | chr3.3:91368060-91368079 | MS.gene40737:CDS | 30.0% | |
ATTATATGTTCTCTGGTTAC+TGG | + | chr3.3:91365268-91365287 | MS.gene40737:intron | 30.0% | |
ATTCCATCATTCAGTATCAT+TGG | - | chr3.3:91365769-91365788 | None:intergenic | 30.0% | |
CAAATATTGAAAAGGAACAG+TGG | + | chr3.3:91367049-91367068 | MS.gene40737:intron | 30.0% | |
CAAATTTGAGCTAAAGTTGT+TGG | + | chr3.3:91366318-91366337 | MS.gene40737:intron | 30.0% | |
CATCAGTTAGTAATCAATCA+AGG | - | chr3.3:91364604-91364623 | None:intergenic | 30.0% | |
CATTACTTTAACTCCTAAAG+TGG | + | chr3.3:91365598-91365617 | MS.gene40737:CDS | 30.0% | |
GACCTAGTAAATTGTTGTAT+AGG | + | chr3.3:91364908-91364927 | MS.gene40737:intron | 30.0% | |
GAGAAAAATACAGGAAGATT+TGG | - | chr3.3:91363984-91364003 | None:intergenic | 30.0% | |
GGCAAATGCAAATATTGAAA+AGG | + | chr3.3:91367041-91367060 | MS.gene40737:intron | 30.0% | |
TATGGCTAGATTTCTTAACT+GGG | + | chr3.3:91368747-91368766 | MS.gene40737:intron | 30.0% | |
TCTCTTTGCAATAAATCACT+GGG | + | chr3.3:91366924-91366943 | MS.gene40737:intron | 30.0% | |
TGCAACTATGATAATCTACA+GGG | - | chr3.3:91368492-91368511 | None:intergenic | 30.0% | |
TGCACAATAACAAATGCTTA+AGG | + | chr3.3:91369139-91369158 | MS.gene40737:intron | 30.0% | |
TGCCAAAAAATTATGTTCCT+CGG | - | chr3.3:91367025-91367044 | None:intergenic | 30.0% | |
TTAACTAGTTAACCTGTAGT+TGG | - | chr3.3:91368232-91368251 | None:intergenic | 30.0% | |
TTATCATACAGGAAGTTAGA+CGG | + | chr3.3:91367307-91367326 | MS.gene40737:intron | 30.0% | |
TTCTCTTTGCAATAAATCAC+TGG | + | chr3.3:91366923-91366942 | MS.gene40737:intron | 30.0% | |
TTTACTGAAATCAGAGAAAG+AGG | + | chr3.3:91364687-91364706 | MS.gene40737:intron | 30.0% | |
TTTCCAATGATACTGAATGA+TGG | + | chr3.3:91365763-91365782 | MS.gene40737:intron | 30.0% | |
TTTGGAAATAAGAAAGAACC+CGG | - | chr3.3:91366599-91366618 | None:intergenic | 30.0% | |
! | AACAGATATAGAACCTTTTG+AGG | - | chr3.3:91364263-91364282 | None:intergenic | 30.0% |
! | ATATCTAATTTTACACAGGG+TGG | + | chr3.3:91365548-91365567 | MS.gene40737:intron | 30.0% |
! | ATTTGGGGTATTATAAGAAG+GGG | - | chr3.3:91366879-91366898 | None:intergenic | 30.0% |
! | CAACAACTTTAGCTCAAATT+TGG | - | chr3.3:91366320-91366339 | None:intergenic | 30.0% |
! | CACTTTAGGAGTTAAAGTAA+TGG | - | chr3.3:91365600-91365619 | None:intergenic | 30.0% |
! | CATTACATTATTTGTTGCTC+TGG | + | chr3.3:91365107-91365126 | MS.gene40737:intron | 30.0% |
! | CGTTTTTCTTCTGTTTGATT+AGG | + | chr3.3:91367497-91367516 | MS.gene40737:intron | 30.0% |
! | CTTTAGCTCAAATTTGGAAA+AGG | - | chr3.3:91366314-91366333 | None:intergenic | 30.0% |
! | GAAATAGGATCATTTTGCAA+AGG | + | chr3.3:91368632-91368651 | MS.gene40737:intron | 30.0% |
! | GAGTGAACTAAACAAACTTT+TGG | + | chr3.3:91365428-91365447 | MS.gene40737:intron | 30.0% |
! | GATTTGGGGTATTATAAGAA+GGG | - | chr3.3:91366880-91366899 | None:intergenic | 30.0% |
! | TAACCTTGTCATTTGAGTTA+CGG | + | chr3.3:91367429-91367448 | MS.gene40737:intron | 30.0% |
! | TAAGCATTCTGAGCATATTT+TGG | + | chr3.3:91367284-91367303 | MS.gene40737:intron | 30.0% |
! | TGATTTGGGGTATTATAAGA+AGG | - | chr3.3:91366881-91366900 | None:intergenic | 30.0% |
! | TTGGTTCAGGTTTATATCAT+TGG | + | chr3.3:91365871-91365890 | MS.gene40737:intron | 30.0% |
! | TTGTTTGTACACGTGTTATT+AGG | + | chr3.3:91364851-91364870 | MS.gene40737:intron | 30.0% |
! | TTTTAGTCATTACGTTTGGA+TGG | - | chr3.3:91367725-91367744 | None:intergenic | 30.0% |
! | TTTTGCAAAGGAGAATAAGA+TGG | + | chr3.3:91368644-91368663 | MS.gene40737:CDS | 30.0% |
!! | AACATTCAACTTGCTGAAAT+AGG | + | chr3.3:91368617-91368636 | MS.gene40737:intron | 30.0% |
!! | ATATAGAACCTTTTGAGGAA+CGG | - | chr3.3:91364258-91364277 | None:intergenic | 30.0% |
!! | ATTGGTGTTGTAAAGCTAAT+GGG | + | chr3.3:91367615-91367634 | MS.gene40737:CDS | 30.0% |
!! | ATTTTCACTGTTTGGGTTAT+TGG | + | chr3.3:91365852-91365871 | MS.gene40737:intron | 30.0% |
!! | CAATATGTTGGTTTCCAAAA+AGG | + | chr3.3:91367093-91367112 | MS.gene40737:intron | 30.0% |
!! | TACTTCAAGATGTTGGTTTA+TGG | + | chr3.3:91368041-91368060 | MS.gene40737:CDS | 30.0% |
!!! | AACCGAGGAACATAATTTTT+TGG | + | chr3.3:91367020-91367039 | MS.gene40737:intron | 30.0% |
!!! | CACTTTACTTTTTGTCACAT+CGG | + | chr3.3:91365475-91365494 | MS.gene40737:intron | 30.0% |
!!! | CTCTTTTAACTTACTCTCAT+TGG | + | chr3.3:91365083-91365102 | MS.gene40737:intron | 30.0% |
!!! | GCATATTTTGGTTATCATAC+AGG | + | chr3.3:91367296-91367315 | MS.gene40737:intron | 30.0% |
!!! | GGATTAGTTTTTTTAGCAGA+TGG | + | chr3.3:91368287-91368306 | MS.gene40737:intron | 30.0% |
!!! | TATGCTCTTATTTTCCTTAC+TGG | - | chr3.3:91365986-91366005 | None:intergenic | 30.0% |
AAACAGTTTCCAGAAGACAT+TGG | - | chr3.3:91366494-91366513 | None:intergenic | 35.0% | |
AAATGACAAGGTTAGAGTTC+TGG | - | chr3.3:91367423-91367442 | None:intergenic | 35.0% | |
AACAAGCTACTTCAAGATGT+TGG | + | chr3.3:91368034-91368053 | MS.gene40737:CDS | 35.0% | |
AACCATAGATAATGACATCC+CGG | + | chr3.3:91367365-91367384 | MS.gene40737:CDS | 35.0% | |
ACATGAATGGTTGTGATTTG+CGG | - | chr3.3:91364460-91364479 | None:intergenic | 35.0% | |
ACTACATCAGTGCAATATGT+TGG | + | chr3.3:91367081-91367100 | MS.gene40737:intron | 35.0% | |
ACTTTATTGTCCCTTTCCAT+AGG | + | chr3.3:91364753-91364772 | MS.gene40737:intron | 35.0% | |
AGTAGGTTATTGTCATGACA+TGG | + | chr3.3:91365829-91365848 | MS.gene40737:intron | 35.0% | |
ATATGCTACTGTTGTTGAGA+TGG | + | chr3.3:91369064-91369083 | MS.gene40737:intron | 35.0% | |
ATGGTCATAGTTATAGCTGA+GGG | + | chr3.3:91367950-91367969 | MS.gene40737:CDS | 35.0% | |
CCTTACTGGAATCCAAATAA+AGG | - | chr3.3:91365972-91365991 | None:intergenic | 35.0% | |
CGAATAGATCAAAATGGAAG+AGG | - | chr3.3:91368711-91368730 | None:intergenic | 35.0% | |
CGATGTGACAAAAAGTAAAG+TGG | - | chr3.3:91365477-91365496 | None:intergenic | 35.0% | |
CGTTGTATCTTAGACTACTA+TGG | + | chr3.3:91368729-91368748 | MS.gene40737:intron | 35.0% | |
CTATGGCTAGATTTCTTAAC+TGG | + | chr3.3:91368746-91368765 | MS.gene40737:intron | 35.0% | |
CTCTTTGCAATAAATCACTG+GGG | + | chr3.3:91366925-91366944 | MS.gene40737:intron | 35.0% | |
GGAGGAATTAAAAATAACCG+AGG | + | chr3.3:91367005-91367024 | MS.gene40737:intron | 35.0% | |
GTTAGTTAACCAATGTCTTC+TGG | + | chr3.3:91366482-91366501 | MS.gene40737:intron | 35.0% | |
GTTTATATCATTGGAGGAGA+TGG | + | chr3.3:91365880-91365899 | MS.gene40737:CDS | 35.0% | |
TAACCGTAACTCAAATGACA+AGG | - | chr3.3:91367435-91367454 | None:intergenic | 35.0% | |
TACGAGGAATTAAGAACTCA+AGG | + | chr3.3:91368195-91368214 | MS.gene40737:intron | 35.0% | |
TAGGGTTCAATTAAACTCAG+AGG | - | chr3.3:91367696-91367715 | None:intergenic | 35.0% | |
TATGGTCATAGTTATAGCTG+AGG | + | chr3.3:91367949-91367968 | MS.gene40737:CDS | 35.0% | |
TCAGATTATAAAACTGTGCG+AGG | - | chr3.3:91368955-91368974 | None:intergenic | 35.0% | |
TCTTTGCAATAAATCACTGG+GGG | + | chr3.3:91366926-91366945 | MS.gene40737:intron | 35.0% | |
TCTTTGTGAACAACAACCTA+TGG | - | chr3.3:91364772-91364791 | None:intergenic | 35.0% | |
TGAACAACAACCTATGGAAA+GGG | - | chr3.3:91364766-91364785 | None:intergenic | 35.0% | |
TGTGATTACTGACAGAATGT+GGG | + | chr3.3:91369273-91369292 | MS.gene40737:CDS | 35.0% | |
TGTGGTCTTTCTTACATGTA+CGG | + | chr3.3:91365020-91365039 | MS.gene40737:CDS | 35.0% | |
TGTTTGATTAGGTTATCGAC+AGG | + | chr3.3:91367508-91367527 | MS.gene40737:intron | 35.0% | |
TTCAACATGTGCTGCATTAA+TGG | - | chr3.3:91367574-91367593 | None:intergenic | 35.0% | |
TTGAATATTACAAGGAACGG+AGG | + | chr3.3:91366987-91367006 | MS.gene40737:intron | 35.0% | |
TTGGAAATAAGAAAGAACCC+GGG | - | chr3.3:91366598-91366617 | None:intergenic | 35.0% | |
TTGGTCATGCCTTTCAAAAA+TGG | - | chr3.3:91365340-91365359 | None:intergenic | 35.0% | |
TTGTGATTACTGACAGAATG+TGG | + | chr3.3:91369272-91369291 | MS.gene40737:CDS | 35.0% | |
TTTATGTTCAAGGAACAGCT+GGG | + | chr3.3:91367163-91367182 | MS.gene40737:intron | 35.0% | |
! | AAAAGGTGGTTTGTATGGTT+CGG | + | chr3.3:91367110-91367129 | MS.gene40737:intron | 35.0% |
! | AACCATACAAACCACCTTTT+TGG | - | chr3.3:91367110-91367129 | None:intergenic | 35.0% |
! | ATGATTTTCACTTGAAGGCA+TGG | - | chr3.3:91366679-91366698 | None:intergenic | 35.0% |
! | CCTTTATTTGGATTCCAGTA+AGG | + | chr3.3:91365969-91365988 | MS.gene40737:intron | 35.0% |
! | GACATGGATTTTCACTGTTT+GGG | + | chr3.3:91365845-91365864 | MS.gene40737:intron | 35.0% |
! | GTTCAGGTTTATATCATTGG+AGG | + | chr3.3:91365874-91365893 | MS.gene40737:intron | 35.0% |
! | TAGGTCAAGCTTTATGTTCA+AGG | + | chr3.3:91367153-91367172 | MS.gene40737:intron | 35.0% |
! | TAGGTTGTTGTTCACAAAGA+TGG | + | chr3.3:91364772-91364791 | MS.gene40737:intron | 35.0% |
! | TCTTGGCATCTTTTTGACAT+GGG | + | chr3.3:91367258-91367277 | MS.gene40737:intron | 35.0% |
! | TGACATGGATTTTCACTGTT+TGG | + | chr3.3:91365844-91365863 | MS.gene40737:intron | 35.0% |
! | TGCAAATGATGATAGTGTAG+TGG | + | chr3.3:91366454-91366473 | MS.gene40737:intron | 35.0% |
! | TTCCAAAAAGGTGGTTTGTA+TGG | + | chr3.3:91367105-91367124 | MS.gene40737:intron | 35.0% |
! | TTCTTGGCATCTTTTTGACA+TGG | + | chr3.3:91367257-91367276 | MS.gene40737:intron | 35.0% |
!! | CATTGGTGTTGTAAAGCTAA+TGG | + | chr3.3:91367614-91367633 | MS.gene40737:CDS | 35.0% |
!! | GATTGACTTGTTATCGTTCT+TGG | + | chr3.3:91367241-91367260 | MS.gene40737:intron | 35.0% |
!! | GTAATGGATACTATAACTGC+AGG | + | chr3.3:91367794-91367813 | MS.gene40737:intron | 35.0% |
!! | TATGTTGGTTTCCAAAAAGG+TGG | + | chr3.3:91367096-91367115 | MS.gene40737:intron | 35.0% |
!! | TTTTGAAAGGCATGACCAAA+TGG | + | chr3.3:91365341-91365360 | MS.gene40737:intron | 35.0% |
AACTGCGGTATCAAAACCAA+AGG | - | chr3.3:91367535-91367554 | None:intergenic | 40.0% | |
AAGAAAAAACAAGGGAAGGG+TGG | - | chr3.3:91366422-91366441 | None:intergenic | 40.0% | |
AATGGAAAAGGATATGGTCC+AGG | - | chr3.3:91365322-91365341 | None:intergenic | 40.0% | |
ACATAGAGATTGAGCATACC+GGG | - | chr3.3:91367386-91367405 | None:intergenic | 40.0% | |
ACGAAAAGGCTGAAAGAAAG+TGG | + | chr3.3:91367923-91367942 | MS.gene40737:CDS | 40.0% | |
AGAAAAAACAAGGGAAGGGT+GGG | - | chr3.3:91366421-91366440 | None:intergenic | 40.0% | |
AGATCCAACTTACATGATCC+GGG | + | chr3.3:91368779-91368798 | MS.gene40737:intron | 40.0% | |
CACAACGTTGTTCATCTTCT+CGG | - | chr3.3:91369257-91369276 | None:intergenic | 40.0% | |
CAGATCCAACTTACATGATC+CGG | + | chr3.3:91368778-91368797 | MS.gene40737:intron | 40.0% | |
CATAAAGCTTGACCTATCAG+AGG | - | chr3.3:91367149-91367168 | None:intergenic | 40.0% | |
CTGCTGTGATTTATGAGGTA+TGG | + | chr3.3:91365917-91365936 | MS.gene40737:intron | 40.0% | |
CTTTATGTTCAAGGAACAGC+TGG | + | chr3.3:91367162-91367181 | MS.gene40737:intron | 40.0% | |
GACATAGAGATTGAGCATAC+CGG | - | chr3.3:91367387-91367406 | None:intergenic | 40.0% | |
GAGGAATTAAGAACTCAAGG+AGG | + | chr3.3:91368198-91368217 | MS.gene40737:intron | 40.0% | |
GATTCATTGATGCCCCTATT+TGG | + | chr3.3:91368266-91368285 | MS.gene40737:intron | 40.0% | |
GCTGAAAGAAAGTGGACATA+TGG | + | chr3.3:91367931-91367950 | MS.gene40737:CDS | 40.0% | |
GTCATAAGGGAAATTGTGTG+TGG | + | chr3.3:91365002-91365021 | MS.gene40737:CDS | 40.0% | |
GTCGAAAATGAACACCTCTT+GGG | - | chr3.3:91364798-91364817 | None:intergenic | 40.0% | |
GTGAACAACAACCTATGGAA+AGG | - | chr3.3:91364767-91364786 | None:intergenic | 40.0% | |
GTGAAGTACATCTTTGTCTC+TGG | + | chr3.3:91365174-91365193 | MS.gene40737:intron | 40.0% | |
GTTGGTTGACTAATGTCTTC+TGG | + | chr3.3:91366336-91366355 | MS.gene40737:intron | 40.0% | |
TACCGGGATGTCATTATCTA+TGG | - | chr3.3:91367370-91367389 | None:intergenic | 40.0% | |
TACGGTTACATCTGATGAGT+CGG | + | chr3.3:91367447-91367466 | MS.gene40737:intron | 40.0% | |
TACTCTTGCTAGTAGAGATG+TGG | + | chr3.3:91367835-91367854 | MS.gene40737:CDS | 40.0% | |
TACTTAACAACCGAGTAAGC+TGG | - | chr3.3:91364107-91364126 | None:intergenic | 40.0% | |
TAGTCATTACGTTTGGATGG+AGG | - | chr3.3:91367722-91367741 | None:intergenic | 40.0% | |
TATCAGTGCTATCTCTGTGA+GGG | - | chr3.3:91366228-91366247 | None:intergenic | 40.0% | |
TATGAGGTATGGTGATTCAG+AGG | + | chr3.3:91365928-91365947 | MS.gene40737:intron | 40.0% | |
TCACAGATGAAAATCGTCCA+TGG | + | chr3.3:91363909-91363928 | MS.gene40737:CDS | 40.0% | |
TCGATCTAATCCAGCTTACT+CGG | + | chr3.3:91364094-91364113 | MS.gene40737:CDS | 40.0% | |
TGGAAATAAGAAAGAACCCG+GGG | - | chr3.3:91366597-91366616 | None:intergenic | 40.0% | |
TGGATGTCATTGACCACTTT+AGG | - | chr3.3:91365614-91365633 | None:intergenic | 40.0% | |
TTATCAGTGCTATCTCTGTG+AGG | - | chr3.3:91366229-91366248 | None:intergenic | 40.0% | |
TTTACACAGGGTGGTTATAG+AGG | + | chr3.3:91365557-91365576 | MS.gene40737:intron | 40.0% | |
TTTCCCTTATGACAGTGTTG+AGG | - | chr3.3:91364995-91365014 | None:intergenic | 40.0% | |
TTTGCACAAGTTTGGAAACC+TGG | + | chr3.3:91365301-91365320 | MS.gene40737:intron | 40.0% | |
! | AAGCTAATGGGTCGTTATAG+TGG | + | chr3.3:91367627-91367646 | MS.gene40737:CDS | 40.0% |
! | AGGAAGATTTGGAACGTAGT+CGG | - | chr3.3:91363973-91363992 | None:intergenic | 40.0% |
! | GGATTAGATCGAAGTGGATT+AGG | - | chr3.3:91364086-91364105 | None:intergenic | 40.0% |
! | GTATCTTCTGAAAGTGGAGA+AGG | - | chr3.3:91368417-91368436 | None:intergenic | 40.0% |
! | TAAGCTGGATTAGATCGAAG+TGG | - | chr3.3:91364092-91364111 | None:intergenic | 40.0% |
! | TACAGAAAGCATGCAAGACA+TGG | + | chr3.3:91367991-91368010 | MS.gene40737:CDS | 40.0% |
!! | ACTGTTTGGGTTATTGGTTC+AGG | + | chr3.3:91365858-91365877 | MS.gene40737:intron | 40.0% |
!! | GAAAGTGTTGAGAATGGCAT+TGG | + | chr3.3:91367597-91367616 | MS.gene40737:CDS | 40.0% |
!! | GAAGCTGAAAGTGTTGAGAA+TGG | + | chr3.3:91367591-91367610 | MS.gene40737:CDS | 40.0% |
!! | GACTAATGTCTTCTGGAATG+TGG | + | chr3.3:91366343-91366362 | MS.gene40737:intron | 40.0% |
AAAAAACAAGGGAAGGGTGG+GGG | - | chr3.3:91366419-91366438 | None:intergenic | 45.0% | |
AAATAAGAAAGAACCCGGGG+GGG | - | chr3.3:91366594-91366613 | None:intergenic | 45.0% | |
AATGACATCCATAAGCGTGG+AGG | + | chr3.3:91365623-91365642 | MS.gene40737:CDS | 45.0% | |
ACACTGTCTGATGCATTGCT+TGG | - | chr3.3:91368810-91368829 | None:intergenic | 45.0% | |
ACGTTTGGATGGAGGAAGTA+GGG | - | chr3.3:91367714-91367733 | None:intergenic | 45.0% | |
ACTACCTCAGTACCTCTGAT+AGG | + | chr3.3:91367134-91367153 | MS.gene40737:intron | 45.0% | |
AGGAGCTGCTGTGATTTATG+AGG | + | chr3.3:91365912-91365931 | MS.gene40737:CDS | 45.0% | |
AGTCACCCTTCTACCTTGAA+GGG | + | chr3.3:91367876-91367895 | MS.gene40737:CDS | 45.0% | |
ATAGTTATAGCTGAGGGAGC+AGG | + | chr3.3:91367956-91367975 | MS.gene40737:CDS | 45.0% | |
ATGCATTGCTTGGAATTGCC+CGG | - | chr3.3:91368800-91368819 | None:intergenic | 45.0% | |
ATTGCCCGGATCATGTAAGT+TGG | - | chr3.3:91368786-91368805 | None:intergenic | 45.0% | |
CAAGATAGTTGACAGCATCC+AGG | + | chr3.3:91365685-91365704 | MS.gene40737:CDS | 45.0% | |
CAGGCAGTACTTTGTGCATA+TGG | + | chr3.3:91364226-91364245 | MS.gene40737:intron | 45.0% | |
CATAGTAAACACGACGATCG+AGG | - | chr3.3:91364333-91364352 | None:intergenic | 45.0% | |
CATCTTCTCGGTGATTCTCT+GGG | - | chr3.3:91369245-91369264 | None:intergenic | 45.0% | |
CGTCGAAAATGAACACCTCT+TGG | - | chr3.3:91364799-91364818 | None:intergenic | 45.0% | |
CTATCATCGCTTGCACTGTT+TGG | - | chr3.3:91366617-91366636 | None:intergenic | 45.0% | |
GAAAAAACAAGGGAAGGGTG+GGG | - | chr3.3:91366420-91366439 | None:intergenic | 45.0% | |
GAAATAAGAAAGAACCCGGG+GGG | - | chr3.3:91366595-91366614 | None:intergenic | 45.0% | |
GGAAATAAGAAAGAACCCGG+GGG | - | chr3.3:91366596-91366615 | None:intergenic | 45.0% | |
GGTCTGAAAGTAGCAATTGC+TGG | + | chr3.3:91367333-91367352 | MS.gene40737:CDS | 45.0% | |
GTCAATGACATCCATAAGCG+TGG | + | chr3.3:91365620-91365639 | MS.gene40737:CDS | 45.0% | |
GTGCATTGAATGGTATGCAG+AGG | - | chr3.3:91368446-91368465 | None:intergenic | 45.0% | |
GTTGCTTGTATCGTCACATG+TGG | + | chr3.3:91364954-91364973 | MS.gene40737:CDS | 45.0% | |
TACGTTTGGATGGAGGAAGT+AGG | - | chr3.3:91367715-91367734 | None:intergenic | 45.0% | |
TAGGTTATCGACAGGTCCTT+TGG | + | chr3.3:91367516-91367535 | MS.gene40737:intron | 45.0% | |
TAGTTGACAGCATCCAGGAT+CGG | + | chr3.3:91365690-91365709 | MS.gene40737:CDS | 45.0% | |
TCATCTTCTCGGTGATTCTC+TGG | - | chr3.3:91369246-91369265 | None:intergenic | 45.0% | |
TGGCCTCAACACTGTCATAA+GGG | + | chr3.3:91364989-91365008 | MS.gene40737:CDS | 45.0% | |
TTCACTGCTGGACTTGTGAA+TGG | + | chr3.3:91368888-91368907 | MS.gene40737:CDS | 45.0% | |
! | AGCGAAATAACCTTTTGCCG+AGG | - | chr3.3:91364829-91364848 | None:intergenic | 45.0% |
! | CAGTCTGATTTGTGCTAGGA+AGG | + | chr3.3:91365136-91365155 | MS.gene40737:intron | 45.0% |
! | CGGATCATGTAAGTTGGATC+TGG | - | chr3.3:91368780-91368799 | None:intergenic | 45.0% |
! | TGCACAGTCTGATTTGTGCT+AGG | + | chr3.3:91365132-91365151 | MS.gene40737:intron | 45.0% |
! | TTATGACAGTGTTGAGGCCA+GGG | - | chr3.3:91364989-91365008 | None:intergenic | 45.0% |
! | TTTTGATACCGCAGTTGAGG+AGG | + | chr3.3:91367539-91367558 | MS.gene40737:CDS | 45.0% |
!! | TGTTTCCAGAAGCATCCTTC+TGG | - | chr3.3:91368018-91368037 | None:intergenic | 45.0% |
!! | TTGACCTATCAGAGGTACTG+AGG | - | chr3.3:91367141-91367160 | None:intergenic | 45.0% |
!!! | TGGTTTTGATACCGCAGTTG+AGG | + | chr3.3:91367536-91367555 | MS.gene40737:CDS | 45.0% |
AAAGTCCACCCTTCCCTTCA+AGG | - | chr3.3:91367892-91367911 | None:intergenic | 50.0% | |
AAGCGTGGAGGAACGATTCT+TGG | + | chr3.3:91365635-91365654 | MS.gene40737:CDS | 50.0% | |
AATAAGAAAGAACCCGGGGG+GGG | - | chr3.3:91366593-91366612 | None:intergenic | 50.0% | |
ACCCTTCCCTTCAAGGTAGA+AGG | - | chr3.3:91367885-91367904 | None:intergenic | 50.0% | |
ACCCTTCTACCTTGAAGGGA+AGG | + | chr3.3:91367880-91367899 | MS.gene40737:CDS | 50.0% | |
AGCGTGGAGGAACGATTCTT+GGG | + | chr3.3:91365636-91365655 | MS.gene40737:CDS | 50.0% | |
AGTTGACAGCATCCAGGATC+GGG | + | chr3.3:91365691-91365710 | MS.gene40737:CDS | 50.0% | |
ATACAGGAAGTTAGACGGCG+AGG | + | chr3.3:91367312-91367331 | MS.gene40737:intron | 50.0% | |
ATGGACCAGAAGGATGCTTC+TGG | + | chr3.3:91368010-91368029 | MS.gene40737:CDS | 50.0% | |
CAGTTCATGGTGCAATGGCT+GGG | + | chr3.3:91368856-91368875 | MS.gene40737:CDS | 50.0% | |
CATGCAAGACATGGACCAGA+AGG | + | chr3.3:91368000-91368019 | MS.gene40737:CDS | 50.0% | |
CCAGGATCGGGGAATTAATC+AGG | + | chr3.3:91365703-91365722 | MS.gene40737:CDS | 50.0% | |
CCCTTCCCTTCAAGGTAGAA+GGG | - | chr3.3:91367884-91367903 | None:intergenic | 50.0% | |
CCCTTCTACCTTGAAGGGAA+GGG | + | chr3.3:91367881-91367900 | MS.gene40737:CDS | 50.0% | |
CCTGATTAATTCCCCGATCC+TGG | - | chr3.3:91365706-91365725 | None:intergenic | 50.0% | |
CTGGCCTCAACACTGTCATA+AGG | + | chr3.3:91364988-91365007 | MS.gene40737:CDS | 50.0% | |
CTTGCTCAGAGTGCAGTTCA+TGG | + | chr3.3:91368843-91368862 | MS.gene40737:CDS | 50.0% | |
GAATCGTTCCTCCACGCTTA+TGG | - | chr3.3:91365634-91365653 | None:intergenic | 50.0% | |
GAGTCACCCTTCTACCTTGA+AGG | + | chr3.3:91367875-91367894 | MS.gene40737:CDS | 50.0% | |
GAGTGCAGTTCATGGTGCAA+TGG | + | chr3.3:91368851-91368870 | MS.gene40737:CDS | 50.0% | |
GCGTGCTCTTTGCACAAGTT+TGG | + | chr3.3:91365293-91365312 | MS.gene40737:intron | 50.0% | |
GCTTGTATCGTCACATGTGG+TGG | + | chr3.3:91364957-91364976 | MS.gene40737:CDS | 50.0% | |
GGATGACACCGTTCCTCAAA+AGG | + | chr3.3:91364247-91364266 | MS.gene40737:CDS | 50.0% | |
GGGTATACTGGATTCACTGC+TGG | + | chr3.3:91368876-91368895 | MS.gene40737:CDS | 50.0% | |
GTTCACAAAGATGGCCCAAG+AGG | + | chr3.3:91364781-91364800 | MS.gene40737:CDS | 50.0% | |
TCAAGGTAGAAGGGTGACTC+TGG | - | chr3.3:91367875-91367894 | None:intergenic | 50.0% | |
TTCTACCTTGAAGGGAAGGG+TGG | + | chr3.3:91367884-91367903 | MS.gene40737:CDS | 50.0% | |
! | ATTTTCGACGTGCAGGACCT+CGG | + | chr3.3:91364809-91364828 | MS.gene40737:CDS | 50.0% |
! | CTTATGACAGTGTTGAGGCC+AGG | - | chr3.3:91364990-91365009 | None:intergenic | 50.0% |
! | GGTGTTCATTTTCGACGTGC+AGG | + | chr3.3:91364802-91364821 | MS.gene40737:CDS | 50.0% |
!! | TACGGTGTCGACAAAGTCCT+CGG | + | chr3.3:91365038-91365057 | MS.gene40737:CDS | 50.0% |
AAAATCGTCCATGGCGACGC+TGG | + | chr3.3:91363918-91363937 | MS.gene40737:CDS | 55.0% | |
ACGATTCTTGGGACATCCCG+AGG | + | chr3.3:91365647-91365666 | MS.gene40737:CDS | 55.0% | |
ACGTTGAGCCTCCTCAACTG+CGG | - | chr3.3:91367550-91367569 | None:intergenic | 55.0% | |
AGCCACTCACATCTATGCCG+AGG | - | chr3.3:91365058-91365077 | None:intergenic | 55.0% | |
ATAAGAAAGAACCCGGGGGG+GGG | - | chr3.3:91366592-91366611 | None:intergenic | 55.0% | |
ATTCTTGGGACATCCCGAGG+GGG | + | chr3.3:91365650-91365669 | MS.gene40737:CDS | 55.0% | |
CGATTCTTGGGACATCCCGA+GGG | + | chr3.3:91365648-91365667 | MS.gene40737:CDS | 55.0% | |
GAGGAGCTCTCACCAACTAC+AGG | + | chr3.3:91368217-91368236 | MS.gene40737:intron | 55.0% | |
GATTCTTGGGACATCCCGAG+GGG | + | chr3.3:91365649-91365668 | MS.gene40737:CDS | 55.0% | |
GCAGTTCATGGTGCAATGGC+TGG | + | chr3.3:91368855-91368874 | MS.gene40737:CDS | 55.0% | |
GGAACGTAGTCGGAGAGATG+AGG | - | chr3.3:91363963-91363982 | None:intergenic | 55.0% | |
GGTGCAATGGCTGGGTATAC+TGG | + | chr3.3:91368864-91368883 | MS.gene40737:CDS | 55.0% | |
GTATGTAACCAGCGTCGCCA+TGG | - | chr3.3:91363929-91363948 | None:intergenic | 55.0% | |
GTCCTCGGCATAGATGTGAG+TGG | + | chr3.3:91365053-91365072 | MS.gene40737:intron | 55.0% | |
GTTGACAGCATCCAGGATCG+GGG | + | chr3.3:91365692-91365711 | MS.gene40737:CDS | 55.0% | |
ACATGTGGTGGTCTCTGCCC+TGG | + | chr3.3:91364969-91364988 | MS.gene40737:CDS | 60.0% | |
ACGTGCAGGACCTCGGCAAA+AGG | + | chr3.3:91364816-91364835 | MS.gene40737:CDS | 60.0% | |
GGAGGAGATGGAACACAGCG+AGG | + | chr3.3:91365892-91365911 | MS.gene40737:CDS | 60.0% | |
TAAGAAAGAACCCGGGGGGG+GGG | - | chr3.3:91366591-91366610 | None:intergenic | 60.0% | |
TGCCAGTATCATGCCCCCCT+CGG | - | chr3.3:91365667-91365686 | None:intergenic | 60.0% | |
TTCTTGGGACATCCCGAGGG+GGG | + | chr3.3:91365651-91365670 | MS.gene40737:CDS | 60.0% | |
AAGAAAGAACCCGGGGGGGG+GGG | - | chr3.3:91366590-91366609 | None:intergenic | 65.0% | |
GCCAGTATCATGCCCCCCTC+GGG | - | chr3.3:91365666-91365685 | None:intergenic | 65.0% | |
! | TCCCGAGGGGGGCATGATAC+TGG | + | chr3.3:91365662-91365681 | MS.gene40737:CDS | 65.0% |
AGAAAGAACCCGGGGGGGGG+GGG | - | chr3.3:91366589-91366608 | None:intergenic | 70.0% | |
AAAGAACCCGGGGGGGGGGG+GGG | - | chr3.3:91366587-91366606 | None:intergenic | 75.0% | |
GAAAGAACCCGGGGGGGGGG+GGG | - | chr3.3:91366588-91366607 | None:intergenic | 75.0% | |
! | AAGAACCCGGGGGGGGGGGG+GGG | - | chr3.3:91366586-91366605 | None:intergenic | 80.0% |
! | AGAACCCGGGGGGGGGGGGG+GGG | - | chr3.3:91366585-91366604 | None:intergenic | 85.0% |
! | AACCCGGGGGGGGGGGGGGG+GGG | - | chr3.3:91366583-91366602 | None:intergenic | 90.0% |
! | GAACCCGGGGGGGGGGGGGG+GGG | - | chr3.3:91366584-91366603 | None:intergenic | 90.0% |
! | ACCCGGGGGGGGGGGGGGGG+GGG | - | chr3.3:91366582-91366601 | None:intergenic | 95.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.3 | gene | 91363888 | 91369325 | 91363888 | ID=MS.gene40737 |
chr3.3 | mRNA | 91363888 | 91369325 | 91363888 | ID=MS.gene40737.t1;Parent=MS.gene40737 |
chr3.3 | exon | 91363888 | 91363992 | 91363888 | ID=MS.gene40737.t1.exon1;Parent=MS.gene40737.t1 |
chr3.3 | CDS | 91363888 | 91363992 | 91363888 | ID=cds.MS.gene40737.t1;Parent=MS.gene40737.t1 |
chr3.3 | exon | 91364077 | 91364123 | 91364077 | ID=MS.gene40737.t1.exon2;Parent=MS.gene40737.t1 |
chr3.3 | CDS | 91364077 | 91364123 | 91364077 | ID=cds.MS.gene40737.t1;Parent=MS.gene40737.t1 |
chr3.3 | exon | 91364229 | 91364268 | 91364229 | ID=MS.gene40737.t1.exon3;Parent=MS.gene40737.t1 |
chr3.3 | CDS | 91364229 | 91364268 | 91364229 | ID=cds.MS.gene40737.t1;Parent=MS.gene40737.t1 |
chr3.3 | exon | 91364775 | 91364837 | 91364775 | ID=MS.gene40737.t1.exon4;Parent=MS.gene40737.t1 |
chr3.3 | CDS | 91364775 | 91364837 | 91364775 | ID=cds.MS.gene40737.t1;Parent=MS.gene40737.t1 |
chr3.3 | exon | 91364930 | 91365067 | 91364930 | ID=MS.gene40737.t1.exon5;Parent=MS.gene40737.t1 |
chr3.3 | CDS | 91364930 | 91365067 | 91364930 | ID=cds.MS.gene40737.t1;Parent=MS.gene40737.t1 |
chr3.3 | exon | 91365566 | 91365724 | 91365566 | ID=MS.gene40737.t1.exon6;Parent=MS.gene40737.t1 |
chr3.3 | CDS | 91365566 | 91365724 | 91365566 | ID=cds.MS.gene40737.t1;Parent=MS.gene40737.t1 |
chr3.3 | exon | 91365880 | 91365933 | 91365880 | ID=MS.gene40737.t1.exon7;Parent=MS.gene40737.t1 |
chr3.3 | CDS | 91365880 | 91365933 | 91365880 | ID=cds.MS.gene40737.t1;Parent=MS.gene40737.t1 |
chr3.3 | exon | 91367318 | 91367386 | 91367318 | ID=MS.gene40737.t1.exon8;Parent=MS.gene40737.t1 |
chr3.3 | CDS | 91367318 | 91367386 | 91367318 | ID=cds.MS.gene40737.t1;Parent=MS.gene40737.t1 |
chr3.3 | exon | 91367519 | 91367648 | 91367519 | ID=MS.gene40737.t1.exon9;Parent=MS.gene40737.t1 |
chr3.3 | CDS | 91367519 | 91367648 | 91367519 | ID=cds.MS.gene40737.t1;Parent=MS.gene40737.t1 |
chr3.3 | exon | 91367816 | 91368081 | 91367816 | ID=MS.gene40737.t1.exon10;Parent=MS.gene40737.t1 |
chr3.3 | CDS | 91367816 | 91368081 | 91367816 | ID=cds.MS.gene40737.t1;Parent=MS.gene40737.t1 |
chr3.3 | exon | 91368639 | 91368687 | 91368639 | ID=MS.gene40737.t1.exon11;Parent=MS.gene40737.t1 |
chr3.3 | CDS | 91368639 | 91368687 | 91368639 | ID=cds.MS.gene40737.t1;Parent=MS.gene40737.t1 |
chr3.3 | exon | 91368781 | 91368935 | 91368781 | ID=MS.gene40737.t1.exon12;Parent=MS.gene40737.t1 |
chr3.3 | CDS | 91368781 | 91368935 | 91368781 | ID=cds.MS.gene40737.t1;Parent=MS.gene40737.t1 |
chr3.3 | exon | 91369247 | 91369325 | 91369247 | ID=MS.gene40737.t1.exon13;Parent=MS.gene40737.t1 |
chr3.3 | CDS | 91369247 | 91369325 | 91369247 | ID=cds.MS.gene40737.t1;Parent=MS.gene40737.t1 |
Gene Sequence |
Protein sequence |