AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene028031

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene028031.t1 MTR_5g027510 98.373 799 13 0 1 799 1 799 0.0 1620
MS.gene028031.t1 MTR_5g086610 59.157 759 302 2 1 759 1 751 0.0 956
MS.gene028031.t1 MTR_7g094570 59.589 730 294 1 1 729 1 730 0.0 917
MS.gene028031.t1 MTR_4g132570 55.239 773 339 3 1 767 1 772 0.0 907
MS.gene028031.t1 MTR_6g012870 31.163 722 467 10 4 722 3 697 1.25e-130 406
MS.gene028031.t1 MTR_7g011610 32.444 712 448 10 9 715 8 691 5.54e-130 407
MS.gene028031.t1 MTR_2g018780 32.159 681 427 8 22 689 21 679 1.72e-120 380
MS.gene028031.t1 MTR_4g082340 31.564 697 437 12 2 690 5 669 2.13e-115 366
MS.gene028031.t1 MTR_1g017170 29.262 786 492 14 10 763 9 762 4.89e-115 367
MS.gene028031.t1 MTR_5g042560 32.591 718 449 14 2 715 5 691 4.14e-114 363
MS.gene028031.t1 MTR_4g082340 31.548 691 433 12 2 684 5 663 1.47e-113 360
MS.gene028031.t1 MTR_4g082340 30.715 713 453 11 2 701 5 689 2.62e-113 361
MS.gene028031.t1 MTR_3g019070 31.163 722 464 14 10 724 9 704 2.79e-111 355
MS.gene028031.t1 MTR_6g012870 30.795 604 394 8 4 607 3 582 4.34e-110 348
MS.gene028031.t1 MTR_3g103560 29.799 698 442 11 10 695 9 670 1.49e-93 309
MS.gene028031.t1 MTR_1g017170 29.784 601 387 9 10 607 9 577 1.29e-92 303
MS.gene028031.t1 MTR_4g082340 30.293 614 388 12 2 607 5 586 2.84e-91 299
MS.gene028031.t1 MTR_4g082340 32.919 483 302 8 214 690 37 503 1.74e-86 285
MS.gene028031.t1 MTR_4g082340 32.780 482 302 8 215 690 36 501 6.12e-86 283
MS.gene028031.t1 MTR_8g074970 21.896 443 284 13 86 476 75 507 6.30e-12 69.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene028031.t1 AT1G32090 72.311 809 208 6 1 796 1 806 0.0 1154
MS.gene028031.t1 AT4G22120 58.562 765 309 3 1 757 1 765 0.0 950
MS.gene028031.t1 AT4G22120 58.562 765 309 3 1 757 1 765 0.0 950
MS.gene028031.t1 AT4G22120 58.562 765 309 3 1 757 1 765 0.0 950
MS.gene028031.t1 AT4G22120 58.562 765 309 3 1 757 1 765 0.0 950
MS.gene028031.t1 AT4G22120 58.562 765 309 3 1 757 1 765 0.0 950
MS.gene028031.t1 AT4G22120 58.562 765 309 3 1 757 1 765 0.0 950
MS.gene028031.t1 AT3G21620 61.043 729 283 1 1 729 1 728 0.0 947
MS.gene028031.t1 AT4G02900 59.470 755 305 1 1 755 1 754 0.0 937
MS.gene028031.t1 AT4G02900 59.470 755 305 1 1 755 1 754 0.0 937
MS.gene028031.t1 AT4G02900 59.470 755 305 1 1 755 1 754 0.0 937
MS.gene028031.t1 AT1G11960 57.839 759 319 1 1 758 1 759 0.0 934
MS.gene028031.t1 AT1G11960 57.839 759 319 1 1 758 1 759 0.0 934
MS.gene028031.t1 AT4G04340 60.918 719 278 2 1 716 1 719 0.0 924
MS.gene028031.t1 AT4G04340 60.918 719 278 2 1 716 1 719 0.0 924
MS.gene028031.t1 AT4G04340 60.918 719 278 2 1 716 1 719 0.0 924
MS.gene028031.t1 AT1G62320 58.540 767 310 3 1 759 1 767 0.0 921
MS.gene028031.t1 AT1G62320 58.540 767 310 3 1 759 1 767 0.0 921
MS.gene028031.t1 AT1G62320 58.279 767 310 4 1 759 1 765 0.0 914
MS.gene028031.t1 AT4G15430 58.621 725 299 1 1 724 1 725 0.0 905
MS.gene028031.t1 AT4G15430 58.540 726 299 2 1 724 1 726 0.0 899
MS.gene028031.t1 AT1G62320 57.497 767 309 5 1 759 1 758 0.0 894
MS.gene028031.t1 AT1G11960 60.033 608 242 1 1 607 1 608 0.0 778
MS.gene028031.t1 AT1G62320 60.855 608 237 1 1 607 1 608 0.0 765
MS.gene028031.t1 AT4G02900 58.853 593 244 0 163 755 1 593 0.0 758
MS.gene028031.t1 AT3G01100 32.068 711 455 8 10 717 9 694 1.90e-134 416
MS.gene028031.t1 AT3G01100 32.068 711 455 8 10 717 55 740 1.28e-133 415
MS.gene028031.t1 AT1G69450 31.198 718 456 12 2 714 5 689 2.27e-127 397
MS.gene028031.t1 AT1G69450 31.198 718 456 12 2 714 5 689 2.27e-127 397
MS.gene028031.t1 AT1G69450 30.067 745 456 13 2 714 5 716 6.43e-122 384
MS.gene028031.t1 AT3G01100 32.546 593 382 6 128 717 2 579 3.32e-115 362
MS.gene028031.t1 AT1G58520 32.558 688 428 10 10 690 9 667 9.15e-112 357
MS.gene028031.t1 AT1G58520 32.558 688 428 10 10 690 9 667 9.15e-112 357
MS.gene028031.t1 AT1G58520 32.558 688 428 10 10 690 9 667 9.15e-112 357
MS.gene028031.t1 AT1G58520 32.558 688 428 10 10 690 9 667 9.15e-112 357
MS.gene028031.t1 AT1G58520 32.558 688 428 10 10 690 9 667 9.15e-112 357
MS.gene028031.t1 AT3G54510 31.609 696 434 14 3 690 2 663 2.55e-110 353
MS.gene028031.t1 AT3G01100 31.104 598 390 6 10 607 9 584 7.62e-108 343
MS.gene028031.t1 AT1G10090 31.358 692 440 9 10 696 9 670 1.13e-105 342
MS.gene028031.t1 AT1G30360 32.084 667 416 12 75 724 61 707 1.32e-103 335
MS.gene028031.t1 AT1G58520 33.037 563 357 7 133 690 2 549 1.87e-94 308
MS.gene028031.t1 AT3G54510 31.703 593 369 13 106 690 4 568 4.51e-94 307
MS.gene028031.t1 AT3G54510 31.703 593 369 13 106 690 4 568 4.51e-94 307
MS.gene028031.t1 AT3G54510 31.158 613 380 14 3 607 2 580 6.80e-89 292
MS.gene028031.t1 AT3G54510 32.871 505 306 12 194 690 5 484 8.34e-82 272
MS.gene028031.t1 AT3G54510 31.176 510 315 13 106 607 4 485 4.13e-73 247
MS.gene028031.t1 AT4G35870 22.345 452 290 17 86 487 92 532 2.35e-14 77.8

Find 170 sgRNAs with CRISPR-Local

Find 349 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGTTCAATCCCTTGCAAATT+TGG 0.134209 5.3:-17121553 MS.gene028031:CDS
ATGTTCCGCCTAAATCTTTA+AGG 0.144840 5.3:-17123684 MS.gene028031:intron
GTTCTTTGCCTTTGCATATT+TGG 0.154654 5.3:-17120685 MS.gene028031:CDS
GACTGGATGTTTAGGGCTTT+GGG 0.172806 5.3:-17122336 MS.gene028031:CDS
CTTCAACTATATTTCCTTCT+TGG 0.194974 5.3:-17120756 MS.gene028031:CDS
CCACCACTAATATACCATTT+AGG 0.197947 5.3:+17125173 None:intergenic
ACAGAGTTTATTTCCCTAAA+TGG 0.214084 5.3:-17125187 MS.gene028031:CDS
CTAAATATGCCTTTATGTTT+AGG 0.214986 5.3:+17119580 None:intergenic
ACAAAATTTGCAGAGCTTCT+TGG 0.225744 5.3:+17125140 None:intergenic
TCACGACCAATTCTCTTCTT+AGG 0.230855 5.3:+17123734 None:intergenic
ATTAATGAGATTGCATTTCT+TGG 0.245647 5.3:-17123394 MS.gene028031:CDS
TGAAGACTCGGAAGAGTTTC+GGG 0.248849 5.3:+17120774 None:intergenic
AGACTGGATGTTTAGGGCTT+TGG 0.249261 5.3:-17122337 MS.gene028031:CDS
TATTCATACCTTAAAGATTT+AGG 0.252033 5.3:+17123676 None:intergenic
TTCACTTACAATTCTATTAC+TGG 0.255562 5.3:+17121498 None:intergenic
ACAACGTTATTACAAGTTTC+CGG 0.275610 5.3:+17121619 None:intergenic
GATGGCTGGGCTGGAATTGC+TGG 0.289571 5.3:-17120906 MS.gene028031:CDS
TGGAATACATGTTAACAATA+TGG 0.299556 5.3:-17123455 MS.gene028031:CDS
CACCACTAATATACCATTTA+GGG 0.310330 5.3:+17125174 None:intergenic
ATGGAAACTCCAATTGTTCT+AGG 0.310906 5.3:+17120969 None:intergenic
AGGAATGTCCCTCGTATTTC+TGG 0.310960 5.3:-17123212 MS.gene028031:CDS
GCCACTGGCAAAATAGATTT+AGG 0.312597 5.3:+17121792 None:intergenic
AAAGAGATAGACTTCAAAAT+TGG 0.320726 5.3:-17122783 MS.gene028031:CDS
TTGAAGACTCGGAAGAGTTT+CGG 0.321291 5.3:+17120773 None:intergenic
CAGCTTAAAGATGTTTATTC+CGG 0.327398 5.3:-17123818 MS.gene028031:CDS
TTCTTGGGAAGCATTATAAC+TGG 0.330877 5.3:-17121141 MS.gene028031:CDS
GCAAGCCAAACAGAAGAATC+TGG 0.335055 5.3:+17120476 None:intergenic
ATGAAAGTGCTGCTGCATTT+TGG 0.337038 5.3:-17120540 MS.gene028031:CDS
CTTCTTTATAACTTACATAA+TGG 0.340191 5.3:-17120931 MS.gene028031:CDS
TTCTCAGAATTTACACTCTT+GGG 0.344073 5.3:-17124998 MS.gene028031:intron
TGTTAAGGAACTTGATAAAC+TGG 0.350242 5.3:-17122276 MS.gene028031:intron
ATAACTTACATAATGGTTGA+TGG 0.352191 5.3:-17120924 MS.gene028031:CDS
TTTCTCAGAATTTACACTCT+TGG 0.352893 5.3:-17124999 MS.gene028031:CDS
TATAGAATTCCTAGAACAAT+TGG 0.359730 5.3:-17120978 MS.gene028031:intron
CAGAGCCACGTGACATATAT+TGG 0.362521 5.3:-17121677 MS.gene028031:CDS
AACCACCCAGATCATTATAT+TGG 0.363209 5.3:-17123149 MS.gene028031:CDS
TTAACATCACATACCTCAAC+AGG 0.367084 5.3:+17120340 None:intergenic
CAGCACTTTCATATCGTTGA+TGG 0.371692 5.3:+17120551 None:intergenic
CTATCCCAGATTCTTCTGTT+TGG 0.376714 5.3:-17120481 MS.gene028031:CDS
TGCTGTCCAATATAATGATC+TGG 0.380778 5.3:+17123143 None:intergenic
GAACCAGGCTCACTCAATAT+TGG 0.382638 5.3:+17119441 None:intergenic
TTCCCTAAATGGTATATTAG+TGG 0.385018 5.3:-17125176 MS.gene028031:CDS
CGAGGAAAGGCCATGGATCC+AGG 0.387525 5.3:-17120810 MS.gene028031:CDS
ATAAAGAAGGTAGCCTTCAT+TGG 0.391823 5.3:+17120945 None:intergenic
CTACACTCTGGTTGACTGAT+TGG 0.399366 5.3:-17121704 MS.gene028031:CDS
TGAAATGCAAATGTCAATAT+TGG 0.405924 5.3:+17120406 None:intergenic
AGCAATGGCTAAGGATATAC+TGG 0.406064 5.3:-17119622 MS.gene028031:CDS
TTGACAGTTGGCCTTGTATC+CGG 0.409375 5.3:+17122727 None:intergenic
AAATAAACTCTGTCATTGAT+TGG 0.409673 5.3:+17125197 None:intergenic
TACACTCTGGTTGACTGATT+GGG 0.413645 5.3:-17121703 MS.gene028031:CDS
AAGGTTGATGCTGGTGTTGA+TGG 0.413776 5.3:+17119397 None:intergenic
TGGAGTTTCCATTCCAATGA+AGG 0.420175 5.3:-17120958 MS.gene028031:CDS
ATATTTGGTTTATCGTCATC+AGG 0.421215 5.3:-17120670 MS.gene028031:intron
GGCCTTTCCTCGATCTCTCT+CGG 0.423810 5.3:+17120821 None:intergenic
CATTTGTTTCTTTAACTGTC+CGG 0.434471 5.3:-17121638 MS.gene028031:CDS
TAATAATACTCGGGAGGTAA+AGG 0.436923 5.3:+17119351 None:intergenic
CAGGCGTGTAGAGCAATTTA+CGG 0.443174 5.3:-17123361 MS.gene028031:intron
CAATATATGTCACGTGGCTC+TGG 0.443766 5.3:+17121678 None:intergenic
GCATAATGAGTAGGGGAGGT+TGG 0.455060 5.3:+17119324 None:intergenic
ATAATGGTTGATGGCTGGGC+TGG 0.456275 5.3:-17120915 MS.gene028031:CDS
ATTGATAGGCATAATGAGTA+GGG 0.460012 5.3:+17119316 None:intergenic
GTACTATGACAAACATGTTA+AGG 0.460628 5.3:-17122291 MS.gene028031:CDS
CGGACAGTTAAAGAAACAAA+TGG 0.467228 5.3:+17121639 None:intergenic
CCCTCGTATTTCTGGTCACT+CGG 0.467875 5.3:-17123204 MS.gene028031:CDS
TATGCCTTTATGTTTAGGTC+CGG 0.473453 5.3:+17119585 None:intergenic
AAAATATTATTACTTTATGC+TGG 0.475588 5.3:-17121172 MS.gene028031:CDS
CTTACATAATGGTTGATGGC+TGG 0.475746 5.3:-17120920 MS.gene028031:CDS
CGAAGTTGAAGAAGAGGAAC+TGG 0.475756 5.3:-17119523 MS.gene028031:CDS
CAATCCCTTGCAAATTTGGA+TGG 0.477041 5.3:-17121549 MS.gene028031:CDS
TCTTTCATTCAACTCACGTT+GGG 0.478282 5.3:-17121766 MS.gene028031:CDS
ATTTCTTGGCCTCACAGCGC+AGG 0.478578 5.3:-17123380 MS.gene028031:CDS
AATAATACTCGGGAGGTAAA+GGG 0.478949 5.3:+17119352 None:intergenic
GATTGCTGCAGGTAGTTGTC+AGG 0.480805 5.3:-17123232 MS.gene028031:intron
GACTAGCAACATGATGAGTT+TGG 0.483095 5.3:+17119463 None:intergenic
AGATAGACTTCAAAATTGGC+TGG 0.489980 5.3:-17122779 MS.gene028031:CDS
TTCATCAAGTCCTTTCTACA+AGG 0.490540 5.3:-17121312 MS.gene028031:CDS
ATCCACACTCCCTGGATCCA+TGG 0.491554 5.3:+17120800 None:intergenic
TCGGGAAAATCCACACTCCC+TGG 0.492669 5.3:+17120792 None:intergenic
AGAACCGGACCTAAACATAA+AGG 0.496261 5.3:-17119589 MS.gene028031:CDS
GATGTTTAGGGCTTTGGGGT+AGG 0.497161 5.3:-17122331 MS.gene028031:CDS
AGTATGAAAGGAAGAAGGAT+TGG 0.497454 5.3:+17120711 None:intergenic
GAAGGTAGCCTTCATTGGAA+TGG 0.498492 5.3:+17120950 None:intergenic
ATCATTCGAAGTTGAAGAAG+AGG 0.498829 5.3:-17119529 MS.gene028031:CDS
AACGTTGTCAGTGTTTGCCT+TGG 0.499535 5.3:-17121604 MS.gene028031:CDS
CAAGACCATCCAAATTTGCA+AGG 0.501112 5.3:+17121544 None:intergenic
ACTGGAGAAAACCACAGAAC+CGG 0.511818 5.3:-17119604 MS.gene028031:CDS
AATGAGTAGGGGAGGTTGGA+TGG 0.511873 5.3:+17119328 None:intergenic
ATCAGAAGCATCCGGATACA+AGG 0.511875 5.3:-17122738 MS.gene028031:CDS
TATGTTTAGGTCCGGTTCTG+TGG 0.515597 5.3:+17119593 None:intergenic
AGGGATTGAACAAAAGCAAT+GGG 0.516576 5.3:+17121564 None:intergenic
GATTCTCAGATTAAAGCCAT+TGG 0.518478 5.3:-17120880 MS.gene028031:CDS
AAATTACATACCTTGACAGT+TGG 0.518886 5.3:+17122715 None:intergenic
TTACATAATGGTTGATGGCT+GGG 0.521446 5.3:-17120919 MS.gene028031:CDS
GACATAATCATCAGAACTGA+TGG 0.521806 5.3:+17121246 None:intergenic
TTCTTTCATTCAACTCACGT+TGG 0.523734 5.3:-17121767 MS.gene028031:CDS
ACTGAAATTATTAATCATGC+TGG 0.525634 5.3:-17125038 MS.gene028031:CDS
AGATCATTATATTGGACAGC+AGG 0.531821 5.3:-17123141 MS.gene028031:intron
GATGCTTCTGATACTTGATC+CGG 0.532516 5.3:+17122749 None:intergenic
TCACTCATTCTCAAAGCTTG+AGG 0.532681 5.3:+17125062 None:intergenic
AGTTAAAGAAACAAATGGTA+TGG 0.532928 5.3:+17121644 None:intergenic
AGTCCAATATTGAGTGAGCC+TGG 0.534008 5.3:-17119444 MS.gene028031:CDS
GTCCCACTTGATACATTGAC+TGG 0.534438 5.3:+17123766 None:intergenic
ACTTCGAATGATCTTAAGAT+CGG 0.535823 5.3:+17119540 None:intergenic
TCATTGTAATGAGGCGGTGA+AGG 0.536265 5.3:+17119378 None:intergenic
ACAGGGTACTTCCTAAATGC+TGG 0.536427 5.3:+17120358 None:intergenic
CAAGCCAAACAGAAGAATCT+GGG 0.538336 5.3:+17120477 None:intergenic
TGTGGTGGTGAAGGTGAACC+AGG 0.540389 5.3:+17119426 None:intergenic
AAAATTGGCTGGACTACTAC+CGG 0.541063 5.3:-17122768 MS.gene028031:CDS
TATTGATAGGCATAATGAGT+AGG 0.544158 5.3:+17119315 None:intergenic
GCAAAGAACACAAGTATGAA+AGG 0.544166 5.3:+17120699 None:intergenic
ATGTATTGTGCAGATGTCAT+TGG 0.546338 5.3:-17121838 MS.gene028031:intron
CTCTACACGCCTGCGCTGTG+AGG 0.550335 5.3:+17123371 None:intergenic
AGGAAATATAGTTGAAGACT+CGG 0.552639 5.3:+17120762 None:intergenic
GTTTATTCCGGTGACAATTG+TGG 0.553997 5.3:-17123806 MS.gene028031:CDS
ACTGGATGTTTAGGGCTTTG+GGG 0.556288 5.3:-17122335 MS.gene028031:CDS
GGCCATGGATCCAGGGAGTG+TGG 0.559197 5.3:-17120802 MS.gene028031:CDS
TTAAGATGATATATAACCAA+TGG 0.560625 5.3:+17120864 None:intergenic
CATTATGTAAGTTATAAAGA+AGG 0.562057 5.3:+17120932 None:intergenic
AAGACCATCCAAATTTGCAA+GGG 0.563432 5.3:+17121545 None:intergenic
GAGAGATCGAGGAAAGGCCA+TGG 0.565449 5.3:-17120817 MS.gene028031:CDS
GGGAAGAAAACCTTGTAGAA+AGG 0.568920 5.3:+17121302 None:intergenic
TCTATTACTGGTCTGAGGAA+AGG 0.569151 5.3:+17121510 None:intergenic
TGGACATGATGTGGTGGTGA+AGG 0.570685 5.3:+17119417 None:intergenic
ATTGGTAACATTATAAGCAA+AGG 0.575298 5.3:+17120424 None:intergenic
GGATACAAGGCCAACTGTCA+AGG 0.577134 5.3:-17122725 MS.gene028031:intron
GATCAAGTATCAGAAGCATC+CGG 0.578609 5.3:-17122746 MS.gene028031:CDS
AAGGGATTGAACAAAAGCAA+TGG 0.581677 5.3:+17121563 None:intergenic
TATTCAGGAAGCAATGGCTA+AGG 0.583268 5.3:-17119631 MS.gene028031:intron
ACACAAGTATGAAAGGAAGA+AGG 0.589413 5.3:+17120706 None:intergenic
ATTCCAGTCAATGTATCAAG+TGG 0.590572 5.3:-17123769 MS.gene028031:CDS
CCTAAATGGTATATTAGTGG+TGG 0.591348 5.3:-17125173 MS.gene028031:CDS
CAGCATACACAACACCAAGA+AGG 0.592677 5.3:+17120742 None:intergenic
ATTTAGGAAGTACCCTGTTG+AGG 0.593328 5.3:-17120353 MS.gene028031:intron
TTGACCTATTCAGGAAGCAA+TGG 0.593825 5.3:-17119637 MS.gene028031:intron
AATAACAAAACATACTGTGT+AGG 0.595294 5.3:+17121078 None:intergenic
GGTTGGATGGTAATAATACT+CGG 0.596727 5.3:+17119341 None:intergenic
GGAACTGGTCGAGCTAGAAA+CGG 0.596988 5.3:-17119508 MS.gene028031:CDS
ACGATAAACCAAATATGCAA+AGG 0.598915 5.3:+17120677 None:intergenic
GCTGTCCAATATAATGATCT+GGG 0.601815 5.3:+17123144 None:intergenic
AGGAGTGCCACAATTGTCAC+CGG 0.602637 5.3:+17123799 None:intergenic
CAATCAGTCAACCAGAGTGT+AGG 0.605255 5.3:+17121705 None:intergenic
TCATACCTTAAAGATTTAGG+CGG 0.607235 5.3:+17123679 None:intergenic
CATTGACTGGAATAAGAATG+AGG 0.607470 5.3:+17123779 None:intergenic
ACAATTCTATTACTGGTCTG+AGG 0.612788 5.3:+17121505 None:intergenic
GTATTAAGCTTGCGATGATG+CGG 0.613231 5.3:+17120503 None:intergenic
AACCGAGAGAGATCGAGGAA+AGG 0.613495 5.3:-17120823 MS.gene028031:CDS
TTGAATGAAAGAAAAGCCAC+TGG 0.615968 5.3:+17121777 None:intergenic
ATGGCAACTCTTCAAGACAT+TGG 0.616464 5.3:-17125290 MS.gene028031:CDS
GTTAAAACCGAGAGAGATCG+AGG 0.618456 5.3:-17120828 MS.gene028031:CDS
ATGATGCGGCTGTGAACTTG+TGG 0.621469 5.3:+17120517 None:intergenic
AAAGGGTAGTCATTGTAATG+AGG 0.622010 5.3:+17119369 None:intergenic
GAGGAAAGGCCATGGATCCA+GGG 0.622176 5.3:-17120809 MS.gene028031:CDS
ATAGGCATAATGAGTAGGGG+AGG 0.624339 5.3:+17119320 None:intergenic
TTGATAGGCATAATGAGTAG+GGG 0.627933 5.3:+17119317 None:intergenic
GAGGCGGTGAAGGTTGATGC+TGG 0.632289 5.3:+17119388 None:intergenic
TTCCAGTCAATGTATCAAGT+GGG 0.644171 5.3:-17123768 MS.gene028031:CDS
TCACTCGGTATCAGATAGTG+TGG 0.644469 5.3:-17123189 MS.gene028031:CDS
TGGTGTTGATGGACATGATG+TGG 0.645171 5.3:+17119408 None:intergenic
GTTGGATGGTAATAATACTC+GGG 0.651526 5.3:+17119342 None:intergenic
GGGTAGTCATTGTAATGAGG+CGG 0.655813 5.3:+17119372 None:intergenic
AAATGCTAACAAGAATGCAA+AGG 0.657265 5.3:+17125238 None:intergenic
TGTTGATGGACATGATGTGG+TGG 0.659291 5.3:+17119411 None:intergenic
GGATGGTAATAATACTCGGG+AGG 0.670756 5.3:+17119345 None:intergenic
TTGCATTATCAACACTCGAG+CGG 0.680054 5.3:-17121206 MS.gene028031:CDS
TTTCGCCAATATATGTCACG+TGG 0.703206 5.3:+17121672 None:intergenic
AATCATGTAGAAGAATACCA+AGG 0.704931 5.3:+17121587 None:intergenic
CCGAGTGACCAGAAATACGA+GGG 0.706704 5.3:+17123204 None:intergenic
ACCGAGTGACCAGAAATACG+AGG 0.719464 5.3:+17123203 None:intergenic
GTCCAATATAATGATCTGGG+TGG 0.744963 5.3:+17123147 None:intergenic
TAACATCACATACCTCAACA+GGG 0.746574 5.3:+17120341 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! AATATATAAAAATATTTTAA+GGG + chr5.3:17123320-17123339 None:intergenic 0.0%
!! AATATTATACTTATTTGAAA+CGG + chr5.3:17121646-17121665 None:intergenic 10.0%
!!! AAAATTAATAAACTCATTTT+TGG - chr5.3:17124328-17124347 MS.gene028031:intron 10.0%
!!! TAATTTGATAAAATTGATTT+TGG - chr5.3:17120303-17120322 MS.gene028031:intron 10.0%
!!! TATATGATTATGTTTTTATT+AGG - chr5.3:17124570-17124589 MS.gene028031:intron 10.0%
!!! TTGTTTTAATTATGTTAAAA+AGG - chr5.3:17119756-17119775 MS.gene028031:intron 10.0%
!! AAAACATAATCATATACATA+TGG + chr5.3:17124566-17124585 None:intergenic 15.0%
!! AAAATATTATTACTTTATGC+TGG - chr5.3:17123417-17123436 MS.gene028031:CDS 15.0%
!! AATGCAAATAAAAATGTTAT+TGG + chr5.3:17124476-17124495 None:intergenic 15.0%
!! ATAATATTTATACATGATGT+TGG - chr5.3:17121658-17121677 MS.gene028031:CDS 15.0%
!! CTTAATTAAGAAAATAAATC+TGG + chr5.3:17124607-17124626 None:intergenic 15.0%
!! TTTAATATTTGATAGAATCA+GGG + chr5.3:17123181-17123200 None:intergenic 15.0%
!! TTTCTTTAACAATTTATGTT+TGG - chr5.3:17120384-17120403 MS.gene028031:CDS 15.0%
!!! CAGATTTATTTTCTTAATTA+AGG - chr5.3:17124605-17124624 MS.gene028031:intron 15.0%
!!! GTTAAAAAGGTTTAATTTTT+AGG - chr5.3:17119769-17119788 MS.gene028031:intron 15.0%
!!! TAAACTCTAGTTTAATATTA+TGG - chr5.3:17123197-17123216 MS.gene028031:CDS 15.0%
!!! TAATTTTTTCCATGTTTTTT+CGG - chr5.3:17123547-17123566 MS.gene028031:intron 15.0%
!!! TCTGATTTTTAAAACATTAA+TGG - chr5.3:17122138-17122157 MS.gene028031:intron 15.0%
!!! TTTTTATTTATATTCAAGAC+TGG + chr5.3:17124312-17124331 None:intergenic 15.0%
!!! TTTTTTATATTATTTAACCG+TGG + chr5.3:17121971-17121990 None:intergenic 15.0%
!! AAATAATATGAAACAGCTTA+TGG + chr5.3:17122466-17122485 None:intergenic 20.0%
!! AGAATTTAAATGAACTAGAA+GGG + chr5.3:17121311-17121330 None:intergenic 20.0%
!! ATGATTATGTCAAAAATTGA+GGG - chr5.3:17123355-17123374 MS.gene028031:intron 20.0%
!! CATTATGTAAGTTATAAAGA+AGG + chr5.3:17123660-17123679 None:intergenic 20.0%
!! CTTCTTTATAACTTACATAA+TGG - chr5.3:17123658-17123677 MS.gene028031:intron 20.0%
!! GAAATATTCAAATAACAATG+AGG + chr5.3:17122633-17122652 None:intergenic 20.0%
!! GGAATAATAATCTGTAATAT+TGG + chr5.3:17124291-17124310 None:intergenic 20.0%
!! GTTTAATATTTGATAGAATC+AGG + chr5.3:17123182-17123201 None:intergenic 20.0%
!! TATTCATACCTTAAAGATTT+AGG + chr5.3:17120916-17120935 None:intergenic 20.0%
!! TGTTTACTATTATTAGCATA+AGG + chr5.3:17122690-17122709 None:intergenic 20.0%
!! TTAAGATGATATATAACCAA+TGG + chr5.3:17123728-17123747 None:intergenic 20.0%
!! TTTATAATCAAAACTACACA+AGG + chr5.3:17124637-17124656 None:intergenic 20.0%
!! TTTCTTTGACTATATGAAAA+AGG - chr5.3:17124764-17124783 MS.gene028031:intron 20.0%
!!! CAATTTATGTTTGGATATTT+TGG - chr5.3:17120393-17120412 MS.gene028031:CDS 20.0%
!!! CTTATTTGACTTTTCTTAAT+TGG - chr5.3:17119501-17119520 MS.gene028031:CDS 20.0%
!!! GTTTTCATGAAAAAAAGTTT+AGG - chr5.3:17124730-17124749 MS.gene028031:intron 20.0%
!!! TAGGATCTTTTATAATTTTC+TGG + chr5.3:17122781-17122800 None:intergenic 20.0%
!!! TGTTTTTATTAGGATTGATT+TGG - chr5.3:17124580-17124599 MS.gene028031:intron 20.0%
!!! TTTTCCAATGTTTTAGAAAT+TGG - chr5.3:17121895-17121914 MS.gene028031:intron 20.0%
!!! TTTTCTATGCAATATGTTAA+GGG - chr5.3:17122350-17122369 MS.gene028031:intron 20.0%
!!! TTTTTAGCTTAACTCATAAT+GGG - chr5.3:17119703-17119722 MS.gene028031:intron 20.0%
!!! TTTTTCTATGCAATATGTTA+AGG - chr5.3:17122349-17122368 MS.gene028031:intron 20.0%
! AAAAATGTGGAAACAAACAT+AGG - chr5.3:17120606-17120625 MS.gene028031:intron 25.0%
! AAAGAAAGTTGAAAACTACA+CGG + chr5.3:17120049-17120068 None:intergenic 25.0%
! AAAGAGATAGACTTCAAAAT+TGG - chr5.3:17121806-17121825 MS.gene028031:CDS 25.0%
! AAATAAACTCTGTCATTGAT+TGG + chr5.3:17119395-17119414 None:intergenic 25.0%
! AAATTCTTAACATCTTCACA+AGG + chr5.3:17119995-17120014 None:intergenic 25.0%
! AATAACAAAACATACTGTGT+AGG + chr5.3:17123514-17123533 None:intergenic 25.0%
! ACAAAAAAGTGACTTATGTT+TGG - chr5.3:17120341-17120360 MS.gene028031:intron 25.0%
! ACTGAAATTATTAATCATGC+TGG - chr5.3:17119551-17119570 MS.gene028031:CDS 25.0%
! AGTTAAAGAAACAAATGGTA+TGG + chr5.3:17122948-17122967 None:intergenic 25.0%
! ATAACTTACATAATGGTTGA+TGG - chr5.3:17123665-17123684 MS.gene028031:intron 25.0%
! ATGTTAACATGCAATGTATT+AGG - chr5.3:17124265-17124284 MS.gene028031:intron 25.0%
! ATTAAATTGTTTATCCAGAC+AGG - chr5.3:17122599-17122618 MS.gene028031:intron 25.0%
! ATTAATGAGATTGCATTTCT+TGG - chr5.3:17121195-17121214 MS.gene028031:CDS 25.0%
! CATAATCATATACATATGGA+AGG + chr5.3:17124562-17124581 None:intergenic 25.0%
! CTAAATATGCCTTTATGTTT+AGG + chr5.3:17125012-17125031 None:intergenic 25.0%
! GAATTTAAATGAACTAGAAG+GGG + chr5.3:17121310-17121329 None:intergenic 25.0%
! GAGAATTTAAATGAACTAGA+AGG + chr5.3:17121312-17121331 None:intergenic 25.0%
! GATGATTATGTCAAAAATTG+AGG - chr5.3:17123354-17123373 MS.gene028031:intron 25.0%
! GGAAAAATGAATTTGACAAT+AGG + chr5.3:17121739-17121758 None:intergenic 25.0%
! TATAGAATTCCTAGAACAAT+TGG - chr5.3:17123611-17123630 MS.gene028031:intron 25.0%
! TATTAAAATCCAGAATCTGA+TGG - chr5.3:17122208-17122227 MS.gene028031:intron 25.0%
! TGAAATGCAAATGTCAATAT+TGG + chr5.3:17124186-17124205 None:intergenic 25.0%
! TGGAATACATGTTAACAATA+TGG - chr5.3:17121134-17121153 MS.gene028031:CDS 25.0%
! TTAAATTGTTTATCCAGACA+GGG - chr5.3:17122600-17122619 MS.gene028031:intron 25.0%
! TTCACTTACAATTCTATTAC+TGG + chr5.3:17123094-17123113 None:intergenic 25.0%
! TTTGACTATATGAAAAAGGT+TGG - chr5.3:17124768-17124787 MS.gene028031:intron 25.0%
!! AACTCATTTTCTTTTGCTTT+TGG - chr5.3:17123247-17123266 MS.gene028031:intron 25.0%
!! AATTGACTTATTTGAGCTTA+TGG - chr5.3:17122387-17122406 MS.gene028031:intron 25.0%
!! ACTGTTTTCAAAAGTTATCT+TGG + chr5.3:17122500-17122519 None:intergenic 25.0%
!! ATTGGTAACATTATAAGCAA+AGG + chr5.3:17124168-17124187 None:intergenic 25.0%
!! ATTTTTCCTAAGAAGAGAAT+TGG - chr5.3:17120849-17120868 MS.gene028031:CDS 25.0%
!! TTTCATGAAAACTCATTTTC+AGG + chr5.3:17124722-17124741 None:intergenic 25.0%
!! TTTTCAGACAAAAACGTTAT+AGG + chr5.3:17123951-17123970 None:intergenic 25.0%
!!! AATTTTTAGGCACATTGTTT+AGG - chr5.3:17119782-17119801 MS.gene028031:intron 25.0%
!!! AGGTTGATTTTGATATTGAT+AGG + chr5.3:17125290-17125309 None:intergenic 25.0%
!!! ATTTTTTGTTCACATAGGAT+TGG - chr5.3:17121114-17121133 MS.gene028031:CDS 25.0%
!!! CTTTTAGATAGAATTGACTT+CGG - chr5.3:17120495-17120514 MS.gene028031:CDS 25.0%
!!! GTGAAACATTGTTTTTAAGA+TGG - chr5.3:17119921-17119940 MS.gene028031:intron 25.0%
!!! GTTTTTAGCTTAACTCATAA+TGG - chr5.3:17119702-17119721 MS.gene028031:intron 25.0%
!!! TTCAGATTTTTTGTTCACAT+AGG - chr5.3:17121109-17121128 MS.gene028031:CDS 25.0%
!!! TTTTAGATAGAATTGACTTC+GGG - chr5.3:17120496-17120515 MS.gene028031:CDS 25.0%
AAAACAGTGTGATCAAATAG+TGG - chr5.3:17121523-17121542 MS.gene028031:CDS 30.0%
AAATGCTAACAAGAATGCAA+AGG + chr5.3:17119354-17119373 None:intergenic 30.0%
AAATTACATACCTTGACAGT+TGG + chr5.3:17121877-17121896 None:intergenic 30.0%
AAGCCAAACGTAACAATTTA+TGG - chr5.3:17120542-17120561 MS.gene028031:CDS 30.0%
AATCATGTAGAAGAATACCA+AGG + chr5.3:17123005-17123024 None:intergenic 30.0%
ACAACGTTATTACAAGTTTC+CGG + chr5.3:17122973-17122992 None:intergenic 30.0%
ACAGAGTTTATTTCCCTAAA+TGG - chr5.3:17119402-17119421 MS.gene028031:CDS 30.0%
ACGATAAACCAAATATGCAA+AGG + chr5.3:17123915-17123934 None:intergenic 30.0%
ACTTCGAATGATCTTAAGAT+CGG + chr5.3:17125052-17125071 None:intergenic 30.0%
AGAAAGAATCAGTTTGGAAA+GGG - chr5.3:17124863-17124882 MS.gene028031:intron 30.0%
AGCAACACTCATATAGTATA+TGG - chr5.3:17120675-17120694 MS.gene028031:CDS 30.0%
AGCAAGCAATTACATTAGTA+TGG + chr5.3:17124896-17124915 None:intergenic 30.0%
AGGAAATATAGTTGAAGACT+CGG + chr5.3:17123830-17123849 None:intergenic 30.0%
ATGCACTTTCCTTATTACTT+GGG - chr5.3:17122717-17122736 MS.gene028031:intron 30.0%
ATTGATAGGCATAATGAGTA+GGG + chr5.3:17125276-17125295 None:intergenic 30.0%
CACCACTAATATACCATTTA+GGG + chr5.3:17119418-17119437 None:intergenic 30.0%
CAGCTTAAAGATGTTTATTC+CGG - chr5.3:17120771-17120790 MS.gene028031:CDS 30.0%
CATAAATTGAGCAAGATTGA+AGG + chr5.3:17120173-17120192 None:intergenic 30.0%
CTACTAGACAATTGTATTGA+AGG + chr5.3:17123223-17123242 None:intergenic 30.0%
CTATTATTAGCATAAGGACA+AGG + chr5.3:17122684-17122703 None:intergenic 30.0%
CTTCAACTATATTTCCTTCT+TGG - chr5.3:17123833-17123852 MS.gene028031:intron 30.0%
GGAAGGAAGTAATATATACA+AGG + chr5.3:17124545-17124564 None:intergenic 30.0%
GTACTATGACAAACATGTTA+AGG - chr5.3:17122298-17122317 MS.gene028031:CDS 30.0%
TACAATCCTTATGTTAGAAG+AGG - chr5.3:17120646-17120665 MS.gene028031:intron 30.0%
TACTGTACTTCTTGTATTCA+TGG + chr5.3:17122170-17122189 None:intergenic 30.0%
TATCATATTGAGCATGTGAT+TGG - chr5.3:17120248-17120267 MS.gene028031:intron 30.0%
TATTGATAGGCATAATGAGT+AGG + chr5.3:17125277-17125296 None:intergenic 30.0%
TCATACCTTAAAGATTTAGG+CGG + chr5.3:17120913-17120932 None:intergenic 30.0%
TGACCATAAATTGTTACGTT+TGG + chr5.3:17120548-17120567 None:intergenic 30.0%
TGTGTTGTGAAAATTGTTGA+AGG - chr5.3:17119945-17119964 MS.gene028031:intron 30.0%
TGTTAAGGAACTTGATAAAC+TGG - chr5.3:17122313-17122332 MS.gene028031:CDS 30.0%
TTCCCTAAATGGTATATTAG+TGG - chr5.3:17119413-17119432 MS.gene028031:CDS 30.0%
TTCTCAGAATTTACACTCTT+GGG - chr5.3:17119591-17119610 MS.gene028031:CDS 30.0%
TTTCTCAGAATTTACACTCT+TGG - chr5.3:17119590-17119609 MS.gene028031:CDS 30.0%
! AACAACTTATGAGACTGTTT+TGG - chr5.3:17122411-17122430 MS.gene028031:intron 30.0%
! ATATTTGGTTTATCGTCATC+AGG - chr5.3:17123919-17123938 MS.gene028031:intron 30.0%
! ATTTTGTAGACTGGATGTTT+AGG - chr5.3:17122245-17122264 MS.gene028031:intron 30.0%
! ATTTTTCTCTTGACCTATTC+AGG - chr5.3:17124943-17124962 MS.gene028031:intron 30.0%
! CATTTGTTTCTTTAACTGTC+CGG - chr5.3:17122951-17122970 MS.gene028031:intron 30.0%
! TCTCTTTTCATTTTGTAGAC+TGG - chr5.3:17122236-17122255 MS.gene028031:intron 30.0%
! TTTTGTAGACTGGATGTTTA+GGG - chr5.3:17122246-17122265 MS.gene028031:intron 30.0%
!! AAATATTTTAAGGGCCAAAC+CGG + chr5.3:17123311-17123330 None:intergenic 30.0%
!! CAAATTCATTTTTCCCTTTC+AGG - chr5.3:17121744-17121763 MS.gene028031:CDS 30.0%
!! GCTAATATTTCTAGTTTCTG+TGG + chr5.3:17120476-17120495 None:intergenic 30.0%
!! TGTAGGATTTTTGCTTTGTT+GGG + chr5.3:17122870-17122889 None:intergenic 30.0%
!! TTGGTTTTCATACTGTACAT+TGG - chr5.3:17120953-17120972 MS.gene028031:CDS 30.0%
!! TTTTAAAAATCAGACCGAAC+TGG + chr5.3:17122132-17122151 None:intergenic 30.0%
AAAGCAAAAATCCTACACTC+TGG - chr5.3:17122873-17122892 MS.gene028031:intron 35.0%
AAAGGGTAGTCATTGTAATG+AGG + chr5.3:17125223-17125242 None:intergenic 35.0%
AACCACCCAGATCATTATAT+TGG - chr5.3:17121440-17121459 MS.gene028031:intron 35.0%
AAGACCATCCAAATTTGCAA+GGG + chr5.3:17123047-17123066 None:intergenic 35.0%
AAGGGATTGAACAAAAGCAA+TGG + chr5.3:17123029-17123048 None:intergenic 35.0%
AATAATACTCGGGAGGTAAA+GGG + chr5.3:17125240-17125259 None:intergenic 35.0%
AATGTAGCTACAACCATGAA+AGG + chr5.3:17121022-17121041 None:intergenic 35.0%
ACAAAATTTGCAGAGCTTCT+TGG + chr5.3:17119452-17119471 None:intergenic 35.0%
ACACAAGTATGAAAGGAAGA+AGG + chr5.3:17123886-17123905 None:intergenic 35.0%
AGAATTTACACTCTTGGGTA+AGG - chr5.3:17119596-17119615 MS.gene028031:CDS 35.0%
AGATAGACTTCAAAATTGGC+TGG - chr5.3:17121810-17121829 MS.gene028031:CDS 35.0%
AGATCATTATATTGGACAGC+AGG - chr5.3:17121448-17121467 MS.gene028031:intron 35.0%
AGCTGTTAGATAACTAAGAG+AGG + chr5.3:17121076-17121095 None:intergenic 35.0%
AGGGATTGAACAAAAGCAAT+GGG + chr5.3:17123028-17123047 None:intergenic 35.0%
AGTATGAAAGGAAGAAGGAT+TGG + chr5.3:17123881-17123900 None:intergenic 35.0%
ATAAAGAAGGTAGCCTTCAT+TGG + chr5.3:17123647-17123666 None:intergenic 35.0%
ATCATTCGAAGTTGAAGAAG+AGG - chr5.3:17125060-17125079 MS.gene028031:CDS 35.0%
ATCCACAAAAATCTGTCACA+TGG + chr5.3:17123579-17123598 None:intergenic 35.0%
ATGGAAACTCCAATTGTTCT+AGG + chr5.3:17123623-17123642 None:intergenic 35.0%
ATGTATTGTGCAGATGTCAT+TGG - chr5.3:17122751-17122770 MS.gene028031:CDS 35.0%
ATGTTCCGCCTAAATCTTTA+AGG - chr5.3:17120905-17120924 MS.gene028031:CDS 35.0%
ATTCCAGTCAATGTATCAAG+TGG - chr5.3:17120820-17120839 MS.gene028031:CDS 35.0%
ATTGTTCCTCCCATTAATTG+CGG - chr5.3:17121278-17121297 MS.gene028031:CDS 35.0%
CATGCACTTTCCTTATTACT+TGG - chr5.3:17122716-17122735 MS.gene028031:intron 35.0%
CCACCACTAATATACCATTT+AGG + chr5.3:17119419-17119438 None:intergenic 35.0%
CCTAAATGGTATATTAGTGG+TGG - chr5.3:17119416-17119435 MS.gene028031:CDS 35.0%
CGGACAGTTAAAGAAACAAA+TGG + chr5.3:17122953-17122972 None:intergenic 35.0%
GAAAATAGCATTTGTGTTGC+AGG + chr5.3:17121593-17121612 None:intergenic 35.0%
GACATAATCATCAGAACTGA+TGG + chr5.3:17123346-17123365 None:intergenic 35.0%
GAGAAAGAATCAGTTTGGAA+AGG - chr5.3:17124862-17124881 MS.gene028031:intron 35.0%
GATTCTCAGATTAAAGCCAT+TGG - chr5.3:17123709-17123728 MS.gene028031:CDS 35.0%
GATTCTGGTAGGTAAAAATG+TGG - chr5.3:17120593-17120612 MS.gene028031:intron 35.0%
GCAAAGAACACAAGTATGAA+AGG + chr5.3:17123893-17123912 None:intergenic 35.0%
GCTGTCCAATATAATGATCT+GGG + chr5.3:17121448-17121467 None:intergenic 35.0%
GGTTGGATGGTAATAATACT+CGG + chr5.3:17125251-17125270 None:intergenic 35.0%
GTACAGTATGAAAACCAACT+TGG + chr5.3:17120951-17120970 None:intergenic 35.0%
GTAGCACAAACTTATCATCA+TGG + chr5.3:17121051-17121070 None:intergenic 35.0%
GTGTGTTCAATCATAGATCT+TGG + chr5.3:17121615-17121634 None:intergenic 35.0%
GTTCTTTGCCTTTGCATATT+TGG - chr5.3:17123904-17123923 MS.gene028031:intron 35.0%
GTTGAAGGAACAATAATGTC+TGG - chr5.3:17119960-17119979 MS.gene028031:intron 35.0%
GTTGGATGGTAATAATACTC+GGG + chr5.3:17125250-17125269 None:intergenic 35.0%
TAACATCACATACCTCAACA+GGG + chr5.3:17124251-17124270 None:intergenic 35.0%
TAATAATACTCGGGAGGTAA+AGG + chr5.3:17125241-17125260 None:intergenic 35.0%
TAGTTCACAACATTCCAAGT+TGG - chr5.3:17120934-17120953 MS.gene028031:CDS 35.0%
TATGCCTTTATGTTTAGGTC+CGG + chr5.3:17125007-17125026 None:intergenic 35.0%
TCTTTCATTCAACTCACGTT+GGG - chr5.3:17122823-17122842 MS.gene028031:CDS 35.0%
TGCACTTTCCTTATTACTTG+GGG - chr5.3:17122718-17122737 MS.gene028031:intron 35.0%
TGCTGTCCAATATAATGATC+TGG + chr5.3:17121449-17121468 None:intergenic 35.0%
TGTTAGATAACTAAGAGAGG+CGG + chr5.3:17121073-17121092 None:intergenic 35.0%
TGTTCAATCCCTTGCAAATT+TGG - chr5.3:17123036-17123055 MS.gene028031:intron 35.0%
TTAACATCACATACCTCAAC+AGG + chr5.3:17124252-17124271 None:intergenic 35.0%
TTCATCAAGTCCTTTCTACA+AGG - chr5.3:17123277-17123296 MS.gene028031:intron 35.0%
TTCCAGTCAATGTATCAAGT+GGG - chr5.3:17120821-17120840 MS.gene028031:CDS 35.0%
TTCTTTCATTCAACTCACGT+TGG - chr5.3:17122822-17122841 MS.gene028031:CDS 35.0%
TTGAATGAAAGAAAAGCCAC+TGG + chr5.3:17122815-17122834 None:intergenic 35.0%
TTGATAGGCATAATGAGTAG+GGG + chr5.3:17125275-17125294 None:intergenic 35.0%
! ACAATTCTATTACTGGTCTG+AGG + chr5.3:17123087-17123106 None:intergenic 35.0%
! AGAAGCTCTGCAAATTTTGT+TGG - chr5.3:17119452-17119471 MS.gene028031:CDS 35.0%
! ATGCTGGTGAATGTTTTCTT+GGG - chr5.3:17123433-17123452 MS.gene028031:CDS 35.0%
! CATTGACTGGAATAAGAATG+AGG + chr5.3:17120813-17120832 None:intergenic 35.0%
! GTGTAGGATTTTTGCTTTGT+TGG + chr5.3:17122871-17122890 None:intergenic 35.0%
! TATGCTGGTGAATGTTTTCT+TGG - chr5.3:17123432-17123451 MS.gene028031:CDS 35.0%
! TCCTAAATCTATTTTGCCAG+TGG - chr5.3:17122796-17122815 MS.gene028031:CDS 35.0%
! TTCTCTTTTCGAAATCCTCA+TGG - chr5.3:17121327-17121346 MS.gene028031:intron 35.0%
! TTTCTACAAGGTTTTCTTCC+CGG - chr5.3:17123289-17123308 MS.gene028031:intron 35.0%
!! AATATTTTAAGGGCCAAACC+GGG + chr5.3:17123310-17123329 None:intergenic 35.0%
!! CATTTTCTTTTGCTTTTGGC+AGG - chr5.3:17123251-17123270 MS.gene028031:intron 35.0%
!! CGGTCCAATTTCTAAAACAT+TGG + chr5.3:17121902-17121921 None:intergenic 35.0%
!! GATTTGTTTTCTGCTCTACA+AGG - chr5.3:17121156-17121175 MS.gene028031:CDS 35.0%
!! TTACATAATGGTTGATGGCT+GGG - chr5.3:17123670-17123689 MS.gene028031:intron 35.0%
!! TTCTTGGGAAGCATTATAAC+TGG - chr5.3:17123448-17123467 MS.gene028031:CDS 35.0%
!! TTGGTGTTTTTGTTCCATGT+GGG - chr5.3:17120125-17120144 MS.gene028031:intron 35.0%
!!! CAGCTTTTGTTTTTTGCTTG+AGG - chr5.3:17120080-17120099 MS.gene028031:intron 35.0%
!!! GTTTCTAGCTTTTCCTTTCA+TGG - chr5.3:17121006-17121025 MS.gene028031:intron 35.0%
!!! TCTCGGTTTTAACTATGAAC+AGG + chr5.3:17123754-17123773 None:intergenic 35.0%
!!! TTTGGTGTTTTTGTTCCATG+TGG - chr5.3:17120124-17120143 MS.gene028031:intron 35.0%
AAAAATCAGACCGAACTGGA+TGG + chr5.3:17122128-17122147 None:intergenic 40.0%
AAAATTGGCTGGACTACTAC+CGG - chr5.3:17121821-17121840 MS.gene028031:CDS 40.0%
AACCAAAACGTGATTCTGGT+AGG - chr5.3:17120582-17120601 MS.gene028031:intron 40.0%
AAGTTATAATCAACGCCAGC+TGG - chr5.3:17124840-17124859 MS.gene028031:intron 40.0%
AATTGGACCGAATATCGAAC+TGG - chr5.3:17121912-17121931 MS.gene028031:intron 40.0%
AGAACCGGACCTAAACATAA+AGG - chr5.3:17125000-17125019 MS.gene028031:CDS 40.0%
AGCAATGGCTAAGGATATAC+TGG - chr5.3:17124967-17124986 MS.gene028031:intron 40.0%
AGCACTCCTCTTCTAACATA+AGG + chr5.3:17120655-17120674 None:intergenic 40.0%
AGCTGGAGAAAGAATCAGTT+TGG - chr5.3:17124857-17124876 MS.gene028031:intron 40.0%
ATGGCAACTCTTCAAGACAT+TGG - chr5.3:17119299-17119318 MS.gene028031:CDS 40.0%
CAAAATCCGCAATTAATGGG+AGG + chr5.3:17121287-17121306 None:intergenic 40.0%
CAAGACCATCCAAATTTGCA+AGG + chr5.3:17123048-17123067 None:intergenic 40.0%
CAAGCCAAACAGAAGAATCT+GGG + chr5.3:17124115-17124134 None:intergenic 40.0%
CAATCCCTTGCAAATTTGGA+TGG - chr5.3:17123040-17123059 MS.gene028031:intron 40.0%
CACAAAAATCTGTCACATGG+AGG + chr5.3:17123576-17123595 None:intergenic 40.0%
CAGCAATCATGAAAACCATG+AGG + chr5.3:17121345-17121364 None:intergenic 40.0%
CAGCACTTTCATATCGTTGA+TGG + chr5.3:17124041-17124060 None:intergenic 40.0%
CCTTTGTGTCATGGTTCAAT+CGG - chr5.3:17121940-17121959 MS.gene028031:intron 40.0%
CGATTGAACCATGACACAAA+GGG + chr5.3:17121942-17121961 None:intergenic 40.0%
CTATCCCAGATTCTTCTGTT+TGG - chr5.3:17124108-17124127 MS.gene028031:intron 40.0%
GACTAACCAAAACGTGATTC+TGG - chr5.3:17120578-17120597 MS.gene028031:intron 40.0%
GACTAGCAACATGATGAGTT+TGG + chr5.3:17125129-17125148 None:intergenic 40.0%
GATGCTTCTGATACTTGATC+CGG + chr5.3:17121843-17121862 None:intergenic 40.0%
GCACTTTCCTTATTACTTGG+GGG - chr5.3:17122719-17122738 MS.gene028031:intron 40.0%
GCCACTGGCAAAATAGATTT+AGG + chr5.3:17122800-17122819 None:intergenic 40.0%
GGGAAGAAAACCTTGTAGAA+AGG + chr5.3:17123290-17123309 None:intergenic 40.0%
GGGCAAAATCCGCAATTAAT+GGG + chr5.3:17121290-17121309 None:intergenic 40.0%
GTATTAAGCTTGCGATGATG+CGG + chr5.3:17124089-17124108 None:intergenic 40.0%
GTCCAATATAATGATCTGGG+TGG + chr5.3:17121445-17121464 None:intergenic 40.0%
GTTGAACTTGAACCTAATGC+TGG - chr5.3:17122039-17122058 MS.gene028031:intron 40.0%
GTTTATTCCGGTGACAATTG+TGG - chr5.3:17120783-17120802 MS.gene028031:CDS 40.0%
TACACTCTGGTTGACTGATT+GGG - chr5.3:17122886-17122905 MS.gene028031:intron 40.0%
TATTCAGGAAGCAATGGCTA+AGG - chr5.3:17124958-17124977 MS.gene028031:intron 40.0%
TCAACTAGGACCAAACCAAT+CGG - chr5.3:17122078-17122097 MS.gene028031:intron 40.0%
TCACGACCAATTCTCTTCTT+AGG + chr5.3:17120858-17120877 None:intergenic 40.0%
TCACTCATTCTCAAAGCTTG+AGG + chr5.3:17119530-17119549 None:intergenic 40.0%
TGGAGTTTCCATTCCAATGA+AGG - chr5.3:17123631-17123650 MS.gene028031:intron 40.0%
TTAGCCATTGCTTCCTGAAT+AGG + chr5.3:17124959-17124978 None:intergenic 40.0%
TTGAAGACTCGGAAGAGTTT+CGG + chr5.3:17123819-17123838 None:intergenic 40.0%
TTGACCTATTCAGGAAGCAA+TGG - chr5.3:17124952-17124971 MS.gene028031:intron 40.0%
TTGCATTATCAACACTCGAG+CGG - chr5.3:17123383-17123402 MS.gene028031:CDS 40.0%
TTTCAGGACACTCGAGAATT+GGG + chr5.3:17124706-17124725 None:intergenic 40.0%
TTTCGCCAATATATGTCACG+TGG + chr5.3:17122920-17122939 None:intergenic 40.0%
TTTCGTGTGAGCTTAAGCTT+TGG - chr5.3:17120106-17120125 MS.gene028031:intron 40.0%
TTTGTGTTGCAGGACAAAAG+TGG + chr5.3:17121583-17121602 None:intergenic 40.0%
! AAACTGATTCTTTCTCCAGC+TGG + chr5.3:17124858-17124877 None:intergenic 40.0%
! ATAGAATTGACTTCGGGACT+AGG - chr5.3:17120502-17120521 MS.gene028031:CDS 40.0%
! ATGGTTTTCATGATTGCTGC+AGG - chr5.3:17121346-17121365 MS.gene028031:intron 40.0%
! CAAAGTACCCCCAAGTAATA+AGG + chr5.3:17122729-17122748 None:intergenic 40.0%
! CTCCATGTGACAGATTTTTG+TGG - chr5.3:17123574-17123593 MS.gene028031:intron 40.0%
! TACCTACCAGAATCACGTTT+TGG + chr5.3:17120587-17120606 None:intergenic 40.0%
! TCTATTACTGGTCTGAGGAA+AGG + chr5.3:17123082-17123101 None:intergenic 40.0%
!! ATTTAGGAAGTACCCTGTTG+AGG - chr5.3:17124236-17124255 MS.gene028031:intron 40.0%
!! CTTACATAATGGTTGATGGC+TGG - chr5.3:17123669-17123688 MS.gene028031:intron 40.0%
!! GATCAAGTATCAGAAGCATC+CGG - chr5.3:17121843-17121862 MS.gene028031:intron 40.0%
!! TGGCTTGCTTAGCACAAAAA+AGG - chr5.3:17124128-17124147 MS.gene028031:intron 40.0%
!! TGGTGTTTTTGTTCCATGTG+GGG - chr5.3:17120126-17120145 MS.gene028031:intron 40.0%
!! TTTTCAGGACACTCGAGAAT+TGG + chr5.3:17124707-17124726 None:intergenic 40.0%
!!! AGACTGTTTTGGAGAGCTTA+TGG - chr5.3:17122422-17122441 MS.gene028031:intron 40.0%
!!! ATGAAAGTGCTGCTGCATTT+TGG - chr5.3:17124049-17124068 MS.gene028031:intron 40.0%
AAATACAGCTACACCCCACA+TGG + chr5.3:17120142-17120161 None:intergenic 45.0%
AACGTTGTCAGTGTTTGCCT+TGG - chr5.3:17122985-17123004 MS.gene028031:intron 45.0%
AACTAGACTGCGGTTCAACT+AGG - chr5.3:17122064-17122083 MS.gene028031:intron 45.0%
AATGCTGGTCAACTAGACTG+CGG - chr5.3:17122054-17122073 MS.gene028031:intron 45.0%
ACTGGAGAAAACCACAGAAC+CGG - chr5.3:17124985-17125004 MS.gene028031:intron 45.0%
AGGAATGTCCCTCGTATTTC+TGG - chr5.3:17121377-17121396 MS.gene028031:intron 45.0%
AGTCCAATATTGAGTGAGCC+TGG - chr5.3:17125145-17125164 MS.gene028031:CDS 45.0%
ATAGGCATAATGAGTAGGGG+AGG + chr5.3:17125272-17125291 None:intergenic 45.0%
CAATATATGTCACGTGGCTC+TGG + chr5.3:17122914-17122933 None:intergenic 45.0%
CAATCAGTCAACCAGAGTGT+AGG + chr5.3:17122887-17122906 None:intergenic 45.0%
CAGAGCCACGTGACATATAT+TGG - chr5.3:17122912-17122931 MS.gene028031:intron 45.0%
CAGCATACACAACACCAAGA+AGG + chr5.3:17123850-17123869 None:intergenic 45.0%
CAGGCGTGTAGAGCAATTTA+CGG - chr5.3:17121228-17121247 MS.gene028031:CDS 45.0%
CAGTCTAGTTGACCAGCATT+AGG + chr5.3:17122054-17122073 None:intergenic 45.0%
CCGATTGAACCATGACACAA+AGG + chr5.3:17121943-17121962 None:intergenic 45.0%
CGAAGTTGAAGAAGAGGAAC+TGG - chr5.3:17125066-17125085 MS.gene028031:CDS 45.0%
CTACACTCTGGTTGACTGAT+TGG - chr5.3:17122885-17122904 MS.gene028031:intron 45.0%
GAACCAGGCTCACTCAATAT+TGG + chr5.3:17125151-17125170 None:intergenic 45.0%
GAAGGTAGCCTTCATTGGAA+TGG + chr5.3:17123642-17123661 None:intergenic 45.0%
GAGAGAACACCATCAGATTC+TGG + chr5.3:17122220-17122239 None:intergenic 45.0%
GCAAGCCAAACAGAAGAATC+TGG + chr5.3:17124116-17124135 None:intergenic 45.0%
GCATTGTAGACAGCCTGAAA+GGG + chr5.3:17121760-17121779 None:intergenic 45.0%
GGATGGTAATAATACTCGGG+AGG + chr5.3:17125247-17125266 None:intergenic 45.0%
GGGGCAAAATCCGCAATTAA+TGG + chr5.3:17121291-17121310 None:intergenic 45.0%
GGGTAGTCATTGTAATGAGG+CGG + chr5.3:17125220-17125239 None:intergenic 45.0%
GTCCCACTTGATACATTGAC+TGG + chr5.3:17120826-17120845 None:intergenic 45.0%
GTTAAAACCGAGAGAGATCG+AGG - chr5.3:17123761-17123780 MS.gene028031:CDS 45.0%
TATGTTTAGGTCCGGTTCTG+TGG + chr5.3:17124999-17125018 None:intergenic 45.0%
TCACTCGGTATCAGATAGTG+TGG - chr5.3:17121400-17121419 MS.gene028031:intron 45.0%
TCATTGTAATGAGGCGGTGA+AGG + chr5.3:17125214-17125233 None:intergenic 45.0%
TGAAGACTCGGAAGAGTTTC+GGG + chr5.3:17123818-17123837 None:intergenic 45.0%
TGCATTGTAGACAGCCTGAA+AGG + chr5.3:17121761-17121780 None:intergenic 45.0%
TGGAGGCAACCGAAAAAACA+TGG + chr5.3:17123559-17123578 None:intergenic 45.0%
! ACAAGGTTTTCTTCCCGGTT+TGG - chr5.3:17123294-17123313 MS.gene028031:intron 45.0%
! ACAGGGTACTTCCTAAATGC+TGG + chr5.3:17124234-17124253 None:intergenic 45.0%
! ACTGGATGTTTAGGGCTTTG+GGG - chr5.3:17122254-17122273 MS.gene028031:intron 45.0%
! AGACTGGATGTTTAGGGCTT+TGG - chr5.3:17122252-17122271 MS.gene028031:intron 45.0%
! GACTGGATGTTTAGGGCTTT+GGG - chr5.3:17122253-17122272 MS.gene028031:intron 45.0%
! TGTTGATGGACATGATGTGG+TGG + chr5.3:17125181-17125200 None:intergenic 45.0%
!! AAGGTTGATGCTGGTGTTGA+TGG + chr5.3:17125195-17125214 None:intergenic 45.0%
!! ATCAGAAGCATCCGGATACA+AGG - chr5.3:17121851-17121870 MS.gene028031:intron 45.0%
!! GTCGTTTTGAGCCAGCATTT+AGG - chr5.3:17124220-17124239 MS.gene028031:intron 45.0%
!! TGGTGTTGATGGACATGATG+TGG + chr5.3:17125184-17125203 None:intergenic 45.0%
!! TTGACAGTTGGCCTTGTATC+CGG + chr5.3:17121865-17121884 None:intergenic 45.0%
!! TAAAATAATTTCAAAATTAA+AGG + chr5.3:17120709-17120728 None:intergenic 5.0%
!!! ATAATTTTTTTTTTCAATTA+TGG + chr5.3:17119860-17119879 None:intergenic 5.0%
!!! GAATATATAAAAATATTTTA+AGG + chr5.3:17123321-17123340 None:intergenic 5.0%
AACCGAGAGAGATCGAGGAA+AGG - chr5.3:17123766-17123785 MS.gene028031:CDS 50.0%
AATGAGTAGGGGAGGTTGGA+TGG + chr5.3:17125264-17125283 None:intergenic 50.0%
ACCGAACTGGATGGTTCAAC+TGG + chr5.3:17122119-17122138 None:intergenic 50.0%
ACCGAGTGACCAGAAATACG+AGG + chr5.3:17121389-17121408 None:intergenic 50.0%
ATGAGGAGTTAGACCCTGTC+TGG + chr5.3:17122616-17122635 None:intergenic 50.0%
ATGATGCGGCTGTGAACTTG+TGG + chr5.3:17124075-17124094 None:intergenic 50.0%
CCCAGTTGAACCATCCAGTT+CGG - chr5.3:17122115-17122134 MS.gene028031:intron 50.0%
CCGAACTGGATGGTTCAACT+GGG + chr5.3:17122118-17122137 None:intergenic 50.0%
CCGAGTGACCAGAAATACGA+GGG + chr5.3:17121388-17121407 None:intergenic 50.0%
GAACAGGCAAGTTTGCCGAT+TGG + chr5.3:17122096-17122115 None:intergenic 50.0%
GATTGCTGCAGGTAGTTGTC+AGG - chr5.3:17121357-17121376 MS.gene028031:intron 50.0%
GCATAATGAGTAGGGGAGGT+TGG + chr5.3:17125268-17125287 None:intergenic 50.0%
GGAACTGGTCGAGCTAGAAA+CGG - chr5.3:17125081-17125100 MS.gene028031:CDS 50.0%
GGATACAAGGCCAACTGTCA+AGG - chr5.3:17121864-17121883 MS.gene028031:intron 50.0%
GGGCTCACCAGTTCGATATT+CGG + chr5.3:17121922-17121941 None:intergenic 50.0%
TGGATGGTTCAACTGGGAAC+AGG + chr5.3:17122112-17122131 None:intergenic 50.0%
! GGCAAGTTTGCCGATTGGTT+TGG + chr5.3:17122091-17122110 None:intergenic 50.0%
! TGGACATGATGTGGTGGTGA+AGG + chr5.3:17125175-17125194 None:intergenic 50.0%
! TGGTTCAATCGGCTTAGCCA+CGG - chr5.3:17121951-17121970 MS.gene028031:intron 50.0%
!! AGGAGTGCCACAATTGTCAC+CGG + chr5.3:17120793-17120812 None:intergenic 50.0%
!! ATAATGGTTGATGGCTGGGC+TGG - chr5.3:17123674-17123693 MS.gene028031:intron 50.0%
!! CCCTCGTATTTCTGGTCACT+CGG - chr5.3:17121385-17121404 MS.gene028031:intron 50.0%
!! GATGTTTAGGGCTTTGGGGT+AGG - chr5.3:17122258-17122277 MS.gene028031:intron 50.0%
ATCCACACTCCCTGGATCCA+TGG + chr5.3:17123792-17123811 None:intergenic 55.0%
ATTTCTTGGCCTCACAGCGC+AGG - chr5.3:17121209-17121228 MS.gene028031:CDS 55.0%
CTGGTGAGCCCTTTGTGTCA+TGG - chr5.3:17121931-17121950 MS.gene028031:intron 55.0%
GAGAGATCGAGGAAAGGCCA+TGG - chr5.3:17123772-17123791 MS.gene028031:CDS 55.0%
GAGGAAAGGCCATGGATCCA+GGG - chr5.3:17123780-17123799 MS.gene028031:CDS 55.0%
GGCCTTTCCTCGATCTCTCT+CGG + chr5.3:17123771-17123790 None:intergenic 55.0%
TCGGGAAAATCCACACTCCC+TGG + chr5.3:17123800-17123819 None:intergenic 55.0%
! TGTGGTGGTGAAGGTGAACC+AGG + chr5.3:17125166-17125185 None:intergenic 55.0%
CGAGGAAAGGCCATGGATCC+AGG - chr5.3:17123779-17123798 MS.gene028031:CDS 60.0%
! GATGGCTGGGCTGGAATTGC+TGG - chr5.3:17123683-17123702 MS.gene028031:intron 60.0%
!! GAGGCGGTGAAGGTTGATGC+TGG + chr5.3:17125204-17125223 None:intergenic 60.0%
CTCTACACGCCTGCGCTGTG+AGG + chr5.3:17121221-17121240 None:intergenic 65.0%
GGCCATGGATCCAGGGAGTG+TGG - chr5.3:17123787-17123806 MS.gene028031:CDS 65.0%


Chromosome Type Strat End Strand Name
chr5.3 gene 17119299 17125312 17119299 ID=MS.gene028031
chr5.3 mRNA 17119299 17125312 17119299 ID=MS.gene028031.t1;Parent=MS.gene028031
chr5.3 exon 17124999 17125312 17124999 ID=MS.gene028031.t1.exon1;Parent=MS.gene028031.t1
chr5.3 CDS 17124999 17125312 17124999 ID=cds.MS.gene028031.t1;Parent=MS.gene028031.t1
chr5.3 exon 17123685 17123837 17123685 ID=MS.gene028031.t1.exon2;Parent=MS.gene028031.t1
chr5.3 CDS 17123685 17123837 17123685 ID=cds.MS.gene028031.t1;Parent=MS.gene028031.t1
chr5.3 exon 17123362 17123497 17123362 ID=MS.gene028031.t1.exon3;Parent=MS.gene028031.t1
chr5.3 CDS 17123362 17123497 17123362 ID=cds.MS.gene028031.t1;Parent=MS.gene028031.t1
chr5.3 exon 17123142 17123243 17123142 ID=MS.gene028031.t1.exon4;Parent=MS.gene028031.t1
chr5.3 CDS 17123142 17123243 17123142 ID=cds.MS.gene028031.t1;Parent=MS.gene028031.t1
chr5.3 exon 17122726 17122845 17122726 ID=MS.gene028031.t1.exon5;Parent=MS.gene028031.t1
chr5.3 CDS 17122726 17122845 17122726 ID=cds.MS.gene028031.t1;Parent=MS.gene028031.t1
chr5.3 exon 17122277 17122357 17122277 ID=MS.gene028031.t1.exon6;Parent=MS.gene028031.t1
chr5.3 CDS 17122277 17122357 17122277 ID=cds.MS.gene028031.t1;Parent=MS.gene028031.t1
chr5.3 exon 17121507 17121847 17121507 ID=MS.gene028031.t1.exon7;Parent=MS.gene028031.t1
chr5.3 CDS 17121507 17121847 17121507 ID=cds.MS.gene028031.t1;Parent=MS.gene028031.t1
chr5.3 exon 17121093 17121338 17121093 ID=MS.gene028031.t1.exon8;Parent=MS.gene028031.t1
chr5.3 CDS 17121093 17121338 17121093 ID=cds.MS.gene028031.t1;Parent=MS.gene028031.t1
chr5.3 exon 17120671 17120995 17120671 ID=MS.gene028031.t1.exon9;Parent=MS.gene028031.t1
chr5.3 CDS 17120671 17120995 17120671 ID=cds.MS.gene028031.t1;Parent=MS.gene028031.t1
chr5.3 exon 17120354 17120587 17120354 ID=MS.gene028031.t1.exon10;Parent=MS.gene028031.t1
chr5.3 CDS 17120354 17120587 17120354 ID=cds.MS.gene028031.t1;Parent=MS.gene028031.t1
chr5.3 exon 17119299 17119646 17119299 ID=MS.gene028031.t1.exon11;Parent=MS.gene028031.t1
chr5.3 CDS 17119299 17119646 17119299 ID=cds.MS.gene028031.t1;Parent=MS.gene028031.t1
Gene Sequence

>MS.gene028031

ATGGCAACTCTTCAAGACATTGGTGTCTCAGCAGCTATCAACATACTCTCAGCCTTTGCATTCTTGTTAGCATTTGCTTTGCTAAGAATTCAACCAATCAATGACAGAGTTTATTTCCCTAAATGGTATATTAGTGGTGGCAGAAGCAATCCAAGAAGCTCTGCAAATTTTGTTGGCAAATTTGTTAATCTTAATTTCAAGACTTATTTGACTTTTCTTAATTGGATGCCTCAAGCTTTGAGAATGAGTGAAACTGAAATTATTAATCATGCTGGTCTTGATTCTGCTGTTTTTCTCAGAATTTACACTCTTGGGTAAGGTTCTTTTTTCTCTTTTGTTGTTTTTTTAGTATAAAGTTTTGATTTTTATTACTCTTTGTTGCTTAATTCTTGTTGCAGCTATAGTTTTTAGCTTAACTCATAATGGGTTCTGAGAATTTTCAATTCTGTTTAGTTTTTTGTTTTAATTATGTTAAAAAGGTTTAATTTTTAGGCACATTGTTTAGGTGTGTTAATGAGAATTAAAATTTTATTTTTAGTCTATAATTTTCAACATAATCCATAATTGAAAAAAAAAATTATTAAAAAATTTAACTTTTTGATGTGTTAGTTGTGTAATAGATGTGAAACATTGTTTTTAAGATGGTTGTGTTGTGAAAATTGTTGAAGGAACAATAATGTCTGGTTTTATTATCCTTGTGAAGATGTTAAGAATTTTTTGTTATCAGAGATTCAATTAAGAGTCATGCCGTGTAGTTTTCAACTTTCTTTTTTGTTAATGTCAGCTTTTGTTTTTTGCTTGAGGTGTTTTCGTGTGAGCTTAAGCTTTGGTGTTTTTGTTCCATGTGGGGTGTAGCTGTATTTTCTTCTTTCCTTCAATCTTGCTCAATTTATGTTATATGTGTGTGAATTTTGTTGTTGTTACGTGTAAAAGCTTCAATTTTTCTGTTTATCATATTGAGCATGTGATTGGTTTTGCATTGTACAAAAATAAATTAACTAAATTAATTTGATAAAATTGATTTTGGTTGAAATTGAGTTGAACAAAAAAGTGACTTATGTTTGGATACATTCACAAAAACATATTTTCTTTAACAATTTATGTTTGGATATTTTGGATTAGAATTGCTTTTACGCGTGTATGTATGTCAATAAACTTGAGAATTGATTCTATGCCACAGAAACTAGAAATATTAGCTTTTAGATAGAATTGACTTCGGGACTAGGATTGATTCTAAAGTCAAAAGCCAAACGTAACAATTTATGGTCAAATCACGTTTGACTAACCAAAACGTGATTCTGGTAGGTAAAAATGTGGAAACAAACATAGGCTAAGTTGAATTATTAGTACAATCCTTATGTTAGAAGAGGAGTGCTAGCAACACTCATATAGTATATGGTCAGTTTACCTTTAATTTTGAAATTATTTTATATATTGTTGATTGTTCTGACTAGTTTTTATGTGTTACACTTCAGCTTAAAGATGTTTATTCCGGTGACAATTGTGGCACTCCTCATTCTTATTCCAGTCAATGTATCAAGTGGGACATTATTTTTCCTAAGAAGAGAATTGGTCGTGAGTGATATCGATAAACTCTCGATATCAAATGTTCCGCCTAAATCTTTAAGGTATGAATAGTTCACAACATTCCAAGTTGGTTTTCATACTGTACATTGGCATATGATATAGCTGCATTACATTTTTCATGTTTCTAGCTTTTCCTTTCATGGTTGTAGCTACATTATATTTCCATGATGATAAGTTTGTGCTACCGCCTCTCTTAGTTATCTAACAGCTGTAATTATCAATTTTCAGATTTTTTGTTCACATAGGATTGGAATACATGTTAACAATATGGATTTGTTTTCTGCTCTACAAGGAGTATGACAATGTAGCATTAATGAGATTGCATTTCTTGGCCTCACAGCGCAGGCGTGTAGAGCAATTTACGGTGAGCTGAAAGTTTTAATTCAGCATGAATTGTTCCTCCCATTAATTGCGGATTTTGCCCCTTCTAGTTCATTTAAATTCTCTTTTCGAAATCCTCATGGTTTTCATGATTGCTGCAGGTAGTTGTCAGGAATGTCCCTCGTATTTCTGGTCACTCGGTATCAGATAGTGTGGACAGCTTCTTTAAAACAAACCACCCAGATCATTATATTGGACAGCAGGTATGAATTTTACGACATTCTTGATTAGTGAGATCTGAAATATAAACTAATGTAAAACAGTGTGATCAAATAGTGGCTATAGCGCTTTAGTGTAGCAGAATTTTCACAAACCACTTTTGTCCTGCAACACAAATGCTATTTTCCAAGATCTATGATTGAACACACATATGAAACCGTTTCAAATAAGTATAATATTTATACATGATGTTGGCATTCGTATATTTTAATTCAGAAGAACATTCTTTGCATTATATTATCGTCATGTTCCTATTGTCAAATTCATTTTTCCCTTTCAGGCTGTCTACAATGCAAATAGATTCGCTAAATTTGTGAGAAAAAGAGATAGACTTCAAAATTGGCTGGACTACTACCGGATCAAGTATCAGAAGCATCCGGATACAAGGCCAACTGTCAAGGTATGTAATTTTTCCAATGTTTTAGAAATTGGACCGAATATCGAACTGGTGAGCCCTTTGTGTCATGGTTCAATCGGCTTAGCCACGGTTAAATAATATAAAAAAGTTTATAAGTAAAATAAATAAATAAACAAGCACAAAAAATGAAAACTTGTTGAACTTGAACCTAATGCTGGTCAACTAGACTGCGGTTCAACTAGGACCAAACCAATCGGCAAACTTGCCTGTTCCCAGTTGAACCATCCAGTTCGGTCTGATTTTTAAAACATTAATGGTAATTACCATGAATACAAGAAGTACAGTATGCGACTTAACAAAAATCTATTAAAATCCAGAATCTGATGGTGTTCTCTCTTTTCATTTTGTAGACTGGATGTTTAGGGCTTTGGGGTAGGAAAGTTGATGCTATCGAGTACTATGACAAACATGTTAAGGAACTTGATAAACTGGTAAGTTTTTTTTGTTTTTCTATGCAATATGTTAAGGGCTTGTTTGAAATTGAATTGACTTATTTGAGCTTATGGAAACAACTTATGAGACTGTTTTGGAGAGCTTATGGAAACAACTTATGACATGTCCATAAGCTGTTTCATATTATTTCTATAAGCTCTCCAAGATAACTTTTGAAAACAGTTTGACTTTATTTTATCTTTCGTTATAGAAAGCTTATACATAAACACTTATATGATAAGCACTTATGCTATAAGCACTTAATTAAATTGTTTATCCAGACAGGGTCTAACTCCTCATTGTTATTTGAATATTTCTGTTACTAAAATTCTGTAAAGTAATTTTCCTTGTCCTTATGCTAATAATAGTAAACAGTAACGCATGCACTTTCCTTATTACTTGGGGGTACTTTGACATGTATTGTGCAGATGTCATTGGAGCGCCAGAAAATTATAAAAGATCCTAAATCTATTTTGCCAGTGGCTTTTCTTTCATTCAACTCACGTTGGGCAGCATCAGTATGTGCACAAACCCAACAAAGCAAAAATCCTACACTCTGGTTGACTGATTGGGCTCCAGAGCCACGTGACATATATTGGCGAAACTTGTCCATACCATTTGTTTCTTTAACTGTCCGGAAACTTGTAATAACGTTGTCAGTGTTTGCCTTGGTATTCTTCTACATGATTCCCATTGCTTTTGTTCAATCCCTTGCAAATTTGGATGGTCTTGAAAGAGTTGCTCCTTTCCTCAGACCAGTAATAGAATTGTAAGTGAACTTAAATGTGCTTTTGAATATATTGAAGAGAAGTTAATAATTCTAGAAGTAAATGAATATGATTCCCTGATTCTATCAAATATTAAACTCTAGTTTAATATTATGGCCTTCAATACAATTGTCTAGTAGTTAAAACTCATTTTCTTTTGCTTTTGGCAGGAAATTCATCAAGTCCTTTCTACAAGGTTTTCTTCCCGGTTTGGCCCTTAAAATATTTTTATATATTCTACCATCAGTTCTGATGATTATGTCAAAAATTGAGGGATATATTGCATTATCAACACTCGAGCGGAAAACAGCAGCAAAATATTATTACTTTATGCTGGTGAATGTTTTCTTGGGAAGCATTATAACTGGAACTGCATTTGAACAACTGCATGCTTTTCTTCATCAGTCACCTACACAGTATGTTTTGTTATTAGTTTTTTCTTGTTAATTTTTTCCATGTTTTTTCGGTTGCCTCCATGTGACAGATTTTTGTGGATTTTATTGTTGATTATAGAATTCCTAGAACAATTGGAGTTTCCATTCCAATGAAGGCTACCTTCTTTATAACTTACATAATGGTTGATGGCTGGGCTGGAATTGCTGGTGAGATTCTCAGATTAAAGCCATTGGTTATATATCATCTTAAGAACCTGTTCATAGTTAAAACCGAGAGAGATCGAGGAAAGGCCATGGATCCAGGGAGTGTGGATTTTCCCGAAACTCTTCCGAGTCTTCAACTATATTTCCTTCTTGGTGTTGTGTATGCTGTAATGACTCCAATCCTTCTTCCTTTCATACTTGTGTTCTTTGCCTTTGCATATTTGGTTTATCGTCATCAGGTCAGTGCCTATAACGTTTTTGTCTGAAAATTCAACGATGCTGTATTATAAATATAATTTGTTGATGATGTTTGACTTTGTAGATAATCAATGTCTACCATCAACGATATGAAAGTGCTGCTGCATTTTGGCCACAAGTTCACAGCCGCATCATCGCAAGCTTAATACTATCCCAGATTCTTCTGTTTGGCTTGCTTAGCACAAAAAAGGCAGTGAAGTCTACACCTTTGCTTATAATGTTACCAATATTGACATTTGCATTTCACAAGTACTGCAAGAGTCGTTTTGAGCCAGCATTTAGGAAGTACCCTGTTGAGGTATGTGATGTTAACATGCAATGTATTAGGCCAATATTACAGATTATTATTCCAGTCTTGAATATAAATAAAAATTAATAAACTCATTTTTGGTGATATAAAATATAAGCGATCTTCAAAAAAAAAAAAAATATAAGCAATCTTAACTAATTTCATCTTATTTAATGATTTTCATGATATTATTCTTTAAATATCTATTGATTAGAATTTAAATTCCAATAACATTTTTATTTGCATTGTTAAGAGATTTGCACTAATATAGTTCTTTATTAAGATATGTTGTTCCTTGTATATATTACTTCCTTCCATATGTATATGATTATGTTTTTATTAGGATTGATTTGGTCCAGATTTATTTTCTTAATTAAGGCACTCTCCTTGTGTAGTTTTGATTATAAATAATATCAAGCTGAGAGCTAATCGTTTAAGCTATTCAGAACTTACACCCAATTCTCGAGTGTCCTGAAAATGAGTTTTCATGAAAAAAAGTTTAGGAAACACAATTATTTCTTTGACTATATGAAAAAGGTTGGATGCGATTAACTAATATTTTTAATTAGCGTGAGTTAATTTTTTGCTTATAAGTTATAATCAACGCCAGCTGGAGAAAGAATCAGTTTGGAAAGGGTGACAAACCATACTAATGTAATTGCTTGCTCATATTTAGCAGTTGTATCGTAAACTGATTTTTCTCTTGACCTATTCAGGAAGCAATGGCTAAGGATATACTGGAGAAAACCACAGAACCGGACCTAAACATAAAGGCATATTTAGCAGATTCTTACTTGCATCCGATCTTAAGATCATTCGAAGTTGAAGAAGAGGAACTGGTCGAGCTAGAAACGGTTGAAGTCAGAGTAGATAAACACCAAACTCATCATGTTGCTAGTCCAATATTGAGTGAGCCTGGTTCACCTTCACCACCACATCATGTCCATCAACACCAGCATCAACCTTCACCGCCTCATTACAATGACTACCCTTTACCTCCCGAGTATTATTACCATCCAACCTCCCCTACTCATTATGCCTATCAATATCAAAATCAACCTTGA
Protein sequence

>MS.gene028031.t1

MATLQDIGVSAAINILSAFAFLLAFALLRIQPINDRVYFPKWYISGGRSNPRSSANFVGKFVNLNFKTYLTFLNWMPQALRMSETEIINHAGLDSAVFLRIYTLGLKMFIPVTIVALLILIPVNVSSGTLFFLRRELVVSDIDKLSISNVPPKSLRFFVHIGLEYMLTIWICFLLYKEYDNVALMRLHFLASQRRRVEQFTVVVRNVPRISGHSVSDSVDSFFKTNHPDHYIGQQAVYNANRFAKFVRKRDRLQNWLDYYRIKYQKHPDTRPTVKTGCLGLWGRKVDAIEYYDKHVKELDKLMSLERQKIIKDPKSILPVAFLSFNSRWAASVCAQTQQSKNPTLWLTDWAPEPRDIYWRNLSIPFVSLTVRKLVITLSVFALVFFYMIPIAFVQSLANLDGLERVAPFLRPVIELKFIKSFLQGFLPGLALKIFLYILPSVLMIMSKIEGYIALSTLERKTAAKYYYFMLVNVFLGSIITGTAFEQLHAFLHQSPTQIPRTIGVSIPMKATFFITYIMVDGWAGIAGEILRLKPLVIYHLKNLFIVKTERDRGKAMDPGSVDFPETLPSLQLYFLLGVVYAVMTPILLPFILVFFAFAYLVYRHQIINVYHQRYESAAAFWPQVHSRIIASLILSQILLFGLLSTKKAVKSTPLLIMLPILTFAFHKYCKSRFEPAFRKYPVEEAMAKDILEKTTEPDLNIKAYLADSYLHPILRSFEVEEEELVELETVEVRVDKHQTHHVASPILSEPGSPSPPHHVHQHQHQPSPPHYNDYPLPPEYYYHPTSPTHYAYQYQNQP