Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39866.t1 | XP_003616997.1 | 98.6 | 766 | 11 | 0 | 1 | 766 | 1 | 766 | 0.00E+00 | 1502.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39866.t1 | Q9LVE4 | 75.9 | 746 | 177 | 2 | 1 | 743 | 1 | 746 | 0.0e+00 | 1139.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39866.t1 | G7KCP6 | 98.6 | 766 | 11 | 0 | 1 | 766 | 1 | 766 | 0.0e+00 | 1502.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050894 | MS.gene39866 | 0.809741 | 1.63E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene067383 | MS.gene39866 | PPI |
| MS.gene39866 | MS.gene72873 | PPI |
| MS.gene018069 | MS.gene39866 | PPI |
| MS.gene016796 | MS.gene39866 | PPI |
| MS.gene52745 | MS.gene39866 | PPI |
| MS.gene39866 | MS.gene028031 | PPI |
| MS.gene81560 | MS.gene39866 | PPI |
| MS.gene070123 | MS.gene39866 | PPI |
| MS.gene39866 | MS.gene04704 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39866.t1 | MTR_5g086610 | 98.564 | 766 | 11 | 0 | 1 | 766 | 1 | 766 | 0.0 | 1563 |
| MS.gene39866.t1 | MTR_4g132570 | 71.879 | 761 | 207 | 3 | 1 | 755 | 1 | 760 | 0.0 | 1139 |
| MS.gene39866.t1 | MTR_7g094570 | 65.879 | 762 | 254 | 3 | 1 | 759 | 1 | 759 | 0.0 | 1047 |
| MS.gene39866.t1 | MTR_5g027510 | 62.483 | 717 | 267 | 1 | 1 | 715 | 1 | 717 | 0.0 | 952 |
| MS.gene39866.t1 | MTR_6g012870 | 32.578 | 706 | 446 | 11 | 10 | 711 | 9 | 688 | 5.71e-138 | 424 |
| MS.gene39866.t1 | MTR_7g011610 | 32.906 | 702 | 446 | 10 | 12 | 711 | 11 | 689 | 3.37e-132 | 411 |
| MS.gene39866.t1 | MTR_4g082340 | 31.623 | 721 | 453 | 14 | 2 | 715 | 5 | 692 | 9.34e-123 | 384 |
| MS.gene39866.t1 | MTR_4g082340 | 31.276 | 729 | 454 | 14 | 2 | 715 | 5 | 701 | 2.75e-121 | 381 |
| MS.gene39866.t1 | MTR_6g012870 | 33.166 | 597 | 375 | 9 | 10 | 605 | 9 | 582 | 1.39e-120 | 375 |
| MS.gene39866.t1 | MTR_4g082340 | 31.679 | 685 | 432 | 11 | 2 | 679 | 5 | 660 | 7.92e-120 | 376 |
| MS.gene39866.t1 | MTR_1g017170 | 29.644 | 759 | 478 | 12 | 10 | 749 | 9 | 730 | 1.50e-117 | 372 |
| MS.gene39866.t1 | MTR_2g018780 | 31.572 | 719 | 457 | 13 | 22 | 726 | 21 | 718 | 2.94e-114 | 362 |
| MS.gene39866.t1 | MTR_3g019070 | 31.549 | 710 | 434 | 14 | 10 | 702 | 9 | 683 | 5.91e-113 | 358 |
| MS.gene39866.t1 | MTR_5g042560 | 30.404 | 717 | 460 | 13 | 2 | 711 | 5 | 689 | 3.85e-104 | 335 |
| MS.gene39866.t1 | MTR_3g103560 | 30.165 | 726 | 477 | 12 | 3 | 725 | 2 | 700 | 5.37e-103 | 333 |
| MS.gene39866.t1 | MTR_4g082340 | 30.769 | 611 | 387 | 11 | 2 | 605 | 5 | 586 | 1.58e-97 | 315 |
| MS.gene39866.t1 | MTR_1g017170 | 30.846 | 603 | 376 | 11 | 10 | 605 | 9 | 577 | 7.80e-97 | 313 |
| MS.gene39866.t1 | MTR_4g082340 | 32.150 | 507 | 324 | 9 | 212 | 715 | 37 | 526 | 5.13e-88 | 288 |
| MS.gene39866.t1 | MTR_4g082340 | 32.016 | 506 | 324 | 9 | 213 | 715 | 36 | 524 | 1.37e-87 | 287 |
| MS.gene39866.t1 | MTR_4g073560 | 87.755 | 49 | 6 | 0 | 106 | 154 | 88 | 136 | 7.64e-20 | 87.0 |
| MS.gene39866.t1 | MTR_8g074970 | 21.605 | 648 | 376 | 22 | 86 | 617 | 75 | 706 | 9.78e-12 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene39866.t1 | AT3G21620 | 75.871 | 746 | 177 | 2 | 1 | 743 | 1 | 746 | 0.0 | 1148 |
| MS.gene39866.t1 | AT1G11960 | 74.274 | 758 | 186 | 3 | 1 | 749 | 1 | 758 | 0.0 | 1146 |
| MS.gene39866.t1 | AT1G11960 | 74.274 | 758 | 186 | 3 | 1 | 749 | 1 | 758 | 0.0 | 1146 |
| MS.gene39866.t1 | AT4G22120 | 73.342 | 754 | 196 | 2 | 1 | 749 | 1 | 754 | 0.0 | 1137 |
| MS.gene39866.t1 | AT4G22120 | 73.342 | 754 | 196 | 2 | 1 | 749 | 1 | 754 | 0.0 | 1137 |
| MS.gene39866.t1 | AT4G22120 | 73.342 | 754 | 196 | 2 | 1 | 749 | 1 | 754 | 0.0 | 1137 |
| MS.gene39866.t1 | AT4G22120 | 73.342 | 754 | 196 | 2 | 1 | 749 | 1 | 754 | 0.0 | 1137 |
| MS.gene39866.t1 | AT4G22120 | 73.342 | 754 | 196 | 2 | 1 | 749 | 1 | 754 | 0.0 | 1137 |
| MS.gene39866.t1 | AT4G22120 | 73.342 | 754 | 196 | 2 | 1 | 749 | 1 | 754 | 0.0 | 1137 |
| MS.gene39866.t1 | AT4G15430 | 72.848 | 755 | 202 | 1 | 1 | 752 | 1 | 755 | 0.0 | 1135 |
| MS.gene39866.t1 | AT4G15430 | 72.751 | 756 | 202 | 2 | 1 | 752 | 1 | 756 | 0.0 | 1132 |
| MS.gene39866.t1 | AT4G04340 | 73.026 | 760 | 200 | 2 | 1 | 755 | 1 | 760 | 0.0 | 1126 |
| MS.gene39866.t1 | AT4G04340 | 73.026 | 760 | 200 | 2 | 1 | 755 | 1 | 760 | 0.0 | 1126 |
| MS.gene39866.t1 | AT4G04340 | 73.026 | 760 | 200 | 2 | 1 | 755 | 1 | 760 | 0.0 | 1126 |
| MS.gene39866.t1 | AT1G62320 | 71.725 | 771 | 213 | 3 | 1 | 766 | 1 | 771 | 0.0 | 1112 |
| MS.gene39866.t1 | AT1G62320 | 71.725 | 771 | 213 | 3 | 1 | 766 | 1 | 771 | 0.0 | 1112 |
| MS.gene39866.t1 | AT1G62320 | 71.595 | 771 | 212 | 4 | 1 | 766 | 1 | 769 | 0.0 | 1108 |
| MS.gene39866.t1 | AT1G62320 | 70.687 | 771 | 212 | 5 | 1 | 766 | 1 | 762 | 0.0 | 1087 |
| MS.gene39866.t1 | AT4G02900 | 65.608 | 756 | 257 | 3 | 1 | 755 | 1 | 754 | 0.0 | 1032 |
| MS.gene39866.t1 | AT4G02900 | 65.608 | 756 | 257 | 3 | 1 | 755 | 1 | 754 | 0.0 | 1032 |
| MS.gene39866.t1 | AT4G02900 | 65.608 | 756 | 257 | 3 | 1 | 755 | 1 | 754 | 0.0 | 1030 |
| MS.gene39866.t1 | AT1G11960 | 75.822 | 608 | 144 | 1 | 1 | 605 | 1 | 608 | 0.0 | 945 |
| MS.gene39866.t1 | AT1G32090 | 62.011 | 716 | 269 | 2 | 1 | 713 | 1 | 716 | 0.0 | 915 |
| MS.gene39866.t1 | AT1G62320 | 74.671 | 608 | 151 | 1 | 1 | 605 | 1 | 608 | 0.0 | 910 |
| MS.gene39866.t1 | AT4G02900 | 64.706 | 595 | 208 | 2 | 161 | 755 | 1 | 593 | 0.0 | 813 |
| MS.gene39866.t1 | AT3G01100 | 32.821 | 716 | 449 | 10 | 10 | 719 | 9 | 698 | 3.14e-136 | 419 |
| MS.gene39866.t1 | AT3G01100 | 32.821 | 716 | 449 | 10 | 10 | 719 | 55 | 744 | 1.12e-135 | 419 |
| MS.gene39866.t1 | AT3G01100 | 34.983 | 586 | 359 | 7 | 139 | 719 | 15 | 583 | 6.70e-122 | 378 |
| MS.gene39866.t1 | AT1G69450 | 30.411 | 730 | 471 | 13 | 4 | 725 | 3 | 703 | 4.96e-121 | 380 |
| MS.gene39866.t1 | AT1G69450 | 30.411 | 730 | 471 | 13 | 4 | 725 | 3 | 703 | 4.96e-121 | 380 |
| MS.gene39866.t1 | AT1G69450 | 29.326 | 757 | 471 | 14 | 4 | 725 | 3 | 730 | 6.94e-116 | 367 |
| MS.gene39866.t1 | AT1G58520 | 30.621 | 725 | 478 | 9 | 10 | 731 | 9 | 711 | 5.00e-113 | 360 |
| MS.gene39866.t1 | AT1G58520 | 30.621 | 725 | 478 | 9 | 10 | 731 | 9 | 711 | 5.00e-113 | 360 |
| MS.gene39866.t1 | AT1G58520 | 30.621 | 725 | 478 | 9 | 10 | 731 | 9 | 711 | 5.00e-113 | 360 |
| MS.gene39866.t1 | AT1G58520 | 30.621 | 725 | 478 | 9 | 10 | 731 | 9 | 711 | 5.00e-113 | 360 |
| MS.gene39866.t1 | AT1G58520 | 30.621 | 725 | 478 | 9 | 10 | 731 | 9 | 711 | 5.00e-113 | 360 |
| MS.gene39866.t1 | AT3G01100 | 32.721 | 599 | 377 | 8 | 10 | 605 | 9 | 584 | 3.23e-110 | 348 |
| MS.gene39866.t1 | AT3G54510 | 30.956 | 701 | 451 | 10 | 10 | 707 | 9 | 679 | 1.77e-105 | 339 |
| MS.gene39866.t1 | AT1G30360 | 32.698 | 682 | 414 | 11 | 22 | 684 | 21 | 676 | 8.67e-103 | 332 |
| MS.gene39866.t1 | AT1G10090 | 29.471 | 699 | 460 | 7 | 10 | 701 | 9 | 681 | 1.93e-102 | 332 |
| MS.gene39866.t1 | AT1G58520 | 31.208 | 596 | 395 | 6 | 139 | 731 | 10 | 593 | 2.04e-95 | 310 |
| MS.gene39866.t1 | AT3G54510 | 31.240 | 605 | 389 | 9 | 106 | 707 | 4 | 584 | 4.47e-91 | 298 |
| MS.gene39866.t1 | AT3G54510 | 31.240 | 605 | 389 | 9 | 106 | 707 | 4 | 584 | 4.47e-91 | 298 |
| MS.gene39866.t1 | AT3G54510 | 31.720 | 599 | 379 | 9 | 10 | 605 | 9 | 580 | 7.97e-88 | 288 |
| MS.gene39866.t1 | AT3G54510 | 32.207 | 503 | 317 | 8 | 106 | 605 | 4 | 485 | 7.78e-74 | 248 |
| MS.gene39866.t1 | AT3G54510 | 31.214 | 519 | 331 | 8 | 192 | 707 | 5 | 500 | 1.87e-73 | 249 |
| MS.gene39866.t1 | AT4G35870 | 21.839 | 435 | 289 | 8 | 86 | 474 | 92 | 521 | 5.85e-13 | 73.2 |
Find 160 sgRNAs with CRISPR-Local
Find 365 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCAGTTCATTAATGTGTTTC+TGG | 0.046711 | 5.4:+68420761 | MS.gene39866:CDS |
| GCTGCTGGCATTATAGATTT+AGG | 0.215346 | 5.4:-68419595 | None:intergenic |
| TGTCTCACAACTTCTGTTAA+TGG | 0.225729 | 5.4:+68421764 | MS.gene39866:CDS |
| TACTGCATTTGCATTCTTAC+TGG | 0.245781 | 5.4:+68416568 | MS.gene39866:CDS |
| CTCCAGCACTCTCATATTCT+TGG | 0.254312 | 5.4:-68421698 | None:intergenic |
| TTTATACAAGGTTTCCTTCC+TGG | 0.259327 | 5.4:+68420618 | MS.gene39866:CDS |
| TGAAACCATATTGTCAAAAC+TGG | 0.272330 | 5.4:-68421840 | None:intergenic |
| CAGAGCCCCGTGACATATAC+TGG | 0.276735 | 5.4:+68419710 | MS.gene39866:CDS |
| ATCGAAACACCAATTGTCTT+TGG | 0.283868 | 5.4:-68420981 | None:intergenic |
| CTGTTATGGTCCCTGTCAAT+TGG | 0.290711 | 5.4:+68417667 | MS.gene39866:CDS |
| AAATACACCCTATCGTTTAT+AGG | 0.291133 | 5.4:-68416614 | None:intergenic |
| ATCCATAAGGCCAACTAAAA+AGG | 0.297259 | 5.4:+68418998 | MS.gene39866:CDS |
| AATGGTATCTGAGGGGTTTA+AGG | 0.314148 | 5.4:+68416642 | MS.gene39866:CDS |
| GTCTCACAACTTCTGTTAAT+GGG | 0.315219 | 5.4:+68421765 | MS.gene39866:CDS |
| ATAACATTACATTTCAATAA+TGG | 0.324210 | 5.4:-68419890 | None:intergenic |
| ATGAAGAAAGTTGCTTTCAT+TGG | 0.328257 | 5.4:-68421005 | None:intergenic |
| GCAATGGATCCTGGGACTAT+TGG | 0.330247 | 5.4:+68421149 | MS.gene39866:CDS |
| AAATCTTTCAAATTGAAGTT+TGG | 0.330467 | 5.4:-68422131 | None:intergenic |
| ATGGCTTCACTTGGCGATAT+AGG | 0.341404 | 5.4:+68416521 | MS.gene39866:CDS |
| CAGTTCATTAATGTGTTTCT+GGG | 0.345844 | 5.4:+68420762 | MS.gene39866:CDS |
| TGTTTCCTTCAAAACTCGTT+GGG | 0.348255 | 5.4:+68419621 | MS.gene39866:CDS |
| TTATACAAGGTTTCCTTCCT+GGG | 0.352560 | 5.4:+68420619 | MS.gene39866:CDS |
| TCAATAAGGAGACTTGTAAT+TGG | 0.363088 | 5.4:+68419763 | MS.gene39866:CDS |
| TATAGGTTGAATCCGAAGTA+TGG | 0.364032 | 5.4:-68416597 | None:intergenic |
| CATACATAAGGTTCTTAAAC+TGG | 0.365960 | 5.4:+68416723 | MS.gene39866:CDS |
| TTTCTTCATAACATACATAA+TGG | 0.366062 | 5.4:+68421019 | MS.gene39866:CDS |
| GCCTGCGTGTTCAATTAGTT+CGG | 0.370906 | 5.4:-68416774 | None:intergenic |
| CATTTGTGCAGGTACTTGTT+AGG | 0.372092 | 5.4:+68418383 | MS.gene39866:intron |
| ATGAGAGTGCTGGAGCATTC+TGG | 0.373825 | 5.4:+68421706 | MS.gene39866:CDS |
| AACCACATTTGAACGTTTCA+AGG | 0.375878 | 5.4:-68417700 | None:intergenic |
| TGTTCAATTAGTTCGGGTTC+CGG | 0.380598 | 5.4:-68416767 | None:intergenic |
| CCTGCGTGTTCAATTAGTTC+GGG | 0.382554 | 5.4:-68416773 | None:intergenic |
| AGAAAATGCTAGGAGTGAAA+TGG | 0.384869 | 5.4:-68417646 | None:intergenic |
| AAACTAGAAATCCAACAATA+TGG | 0.385358 | 5.4:+68419671 | MS.gene39866:CDS |
| TCACTTAAAGAATTTCTTGT+TGG | 0.388253 | 5.4:+68421100 | MS.gene39866:CDS |
| CAGTATATGTCACGGGGCTC+TGG | 0.392278 | 5.4:-68419709 | None:intergenic |
| CATATGTTTCTCTCTCAATA+AGG | 0.392484 | 5.4:+68419749 | MS.gene39866:CDS |
| CAACAATATGGTTGACTGAA+TGG | 0.398254 | 5.4:+68419683 | MS.gene39866:CDS |
| GGGACTATTGGTTTCAATAC+AGG | 0.399816 | 5.4:+68421161 | MS.gene39866:CDS |
| ACTTATAAACCCTTCGAACT+TGG | 0.400798 | 5.4:-68420694 | None:intergenic |
| CGTGAAGAAGCAATGGATCC+TGG | 0.400945 | 5.4:+68421140 | MS.gene39866:CDS |
| CATTCAGTCAACCATATTGT+TGG | 0.403385 | 5.4:-68419682 | None:intergenic |
| GTTTATAAGTCAGTCTTCTC+TGG | 0.406786 | 5.4:+68420707 | MS.gene39866:CDS |
| GAAAATGCTAGGAGTGAAAT+GGG | 0.410463 | 5.4:-68417645 | None:intergenic |
| GAATGAATTTATCTAGTTGT+TGG | 0.411008 | 5.4:-68420809 | None:intergenic |
| CCAGAAACACATTAATGAAC+TGG | 0.416762 | 5.4:-68420761 | None:intergenic |
| TGAACGTTTCAAGGTGTCAT+TGG | 0.416852 | 5.4:-68417691 | None:intergenic |
| AGCCCCTCCTTGCAGTGGAC+TGG | 0.416899 | 5.4:-68416666 | None:intergenic |
| ATACAACTTTATTTCTTGCT+TGG | 0.417063 | 5.4:+68421194 | MS.gene39866:CDS |
| CAGGATCCATTGCTTCTTCA+CGG | 0.418998 | 5.4:-68421139 | None:intergenic |
| CAGTCACTTGCTAATATAGA+AGG | 0.422929 | 5.4:+68419838 | MS.gene39866:CDS |
| AATTTGTCAATATAGACTTC+AGG | 0.427589 | 5.4:+68416699 | MS.gene39866:CDS |
| AAACCCCTCAGATACCATTT+CGG | 0.427688 | 5.4:-68416638 | None:intergenic |
| GTCTCCGTCATCTTTGAAAA+CGG | 0.427813 | 5.4:-68422177 | None:intergenic |
| GATGGATGGGCAGGATGTGC+TGG | 0.429016 | 5.4:+68421044 | MS.gene39866:CDS |
| ATATTCCACTTGGATCAAAT+AGG | 0.437664 | 5.4:+68417754 | MS.gene39866:CDS |
| GACATGATCATCAATATTGT+TGG | 0.439726 | 5.4:-68420672 | None:intergenic |
| TCCGGCATTTGCAATGCAGC+AGG | 0.444627 | 5.4:-68416749 | None:intergenic |
| AACAATATGGTTGACTGAAT+GGG | 0.447238 | 5.4:+68419684 | MS.gene39866:CDS |
| AACTTGATCATACCGTGAAT+TGG | 0.448801 | 5.4:-68418230 | None:intergenic |
| GGACATGCTATATCTTGAAA+AGG | 0.449434 | 5.4:+68418145 | MS.gene39866:CDS |
| ATAACATACATAATGGTTGA+TGG | 0.452299 | 5.4:+68421026 | MS.gene39866:CDS |
| GTGTCATTGGTCCAATTGAC+AGG | 0.457964 | 5.4:-68417678 | None:intergenic |
| TGATCAATATCTAACTCATC+AGG | 0.460224 | 5.4:+68418474 | MS.gene39866:CDS |
| CAGGTGTGTTCTTCCGCGAC+TGG | 0.464122 | 5.4:-68422262 | None:intergenic |
| TTTCTGGGGAGCATAATTAC+CGG | 0.466924 | 5.4:+68420777 | MS.gene39866:CDS |
| TGCAGAATTCCAAAGACAAT+TGG | 0.469700 | 5.4:+68420972 | MS.gene39866:intron |
| TCTCCGTCATCTTTGAAAAC+GGG | 0.472289 | 5.4:-68422176 | None:intergenic |
| ATATCTTGTCTACCGTCATC+AGG | 0.473416 | 5.4:+68421280 | MS.gene39866:CDS |
| ATGATGTATGGAAGTAGAAA+TGG | 0.475585 | 5.4:-68421239 | None:intergenic |
| TACTGGCATTTGCCATACTT+CGG | 0.477975 | 5.4:+68416585 | MS.gene39866:CDS |
| CTGACTGATTCATCAGCATC+AGG | 0.478193 | 5.4:-68418415 | None:intergenic |
| TTGTTTCCTTCAAAACTCGT+TGG | 0.486952 | 5.4:+68419620 | MS.gene39866:CDS |
| ACTAATTGAACACGCAGGCT+TGG | 0.494038 | 5.4:+68416778 | MS.gene39866:CDS |
| ACAATACGTCCATGGACATC+AGG | 0.498283 | 5.4:-68421729 | None:intergenic |
| ATTCTAGAAACGAATCCATA+AGG | 0.498469 | 5.4:+68418985 | MS.gene39866:CDS |
| CGTTAAATTTCAGATAGAGC+TGG | 0.503238 | 5.4:+68419549 | MS.gene39866:intron |
| TAGTTGTTGGAATGCAGTCC+CGG | 0.513391 | 5.4:-68420796 | None:intergenic |
| CATACATAATGGTTGATGGA+TGG | 0.514476 | 5.4:+68421030 | MS.gene39866:CDS |
| GGTCCAGTCCACTGCAAGGA+GGG | 0.519106 | 5.4:+68416663 | MS.gene39866:CDS |
| GACATGCTATATCTTGAAAA+GGG | 0.520309 | 5.4:+68418146 | MS.gene39866:CDS |
| GATCATACCGTGAATTGGTC+AGG | 0.520969 | 5.4:-68418225 | None:intergenic |
| TAGACTTCAGGTCATACATA+AGG | 0.521133 | 5.4:+68416711 | MS.gene39866:CDS |
| TTTAAGTGATAAAATATCAA+AGG | 0.523335 | 5.4:-68421086 | None:intergenic |
| TTGAAGGAAACAAAGGCTGC+TGG | 0.523880 | 5.4:-68419610 | None:intergenic |
| TGGATTCTGCTGTATACTTG+AGG | 0.524624 | 5.4:+68416798 | MS.gene39866:CDS |
| TGATGAGTTAGATATTGATC+AGG | 0.525466 | 5.4:-68418472 | None:intergenic |
| ACATTTCAATAATGGACTTG+AGG | 0.530070 | 5.4:-68419882 | None:intergenic |
| AGTGACTGTACGAATGCAAT+GGG | 0.531271 | 5.4:-68419823 | None:intergenic |
| GCCTGCTGCATTGCAAATGC+CGG | 0.532910 | 5.4:+68416748 | MS.gene39866:CDS |
| ATGATCATGTCCAAGTTCGA+AGG | 0.533063 | 5.4:+68420684 | MS.gene39866:CDS |
| TCAATTTCAAATATTCCACT+TGG | 0.533872 | 5.4:+68417744 | MS.gene39866:CDS |
| AACCAAGAATATGAGAGTGC+TGG | 0.536287 | 5.4:+68421696 | MS.gene39866:CDS |
| TACTTGAGGATCTACTTACT+CGG | 0.536863 | 5.4:+68416812 | MS.gene39866:CDS |
| CACCTTGAAACGTTCAAATG+TGG | 0.537370 | 5.4:+68417698 | MS.gene39866:CDS |
| CTTATTGAGAGAGAAACATA+TGG | 0.537706 | 5.4:-68419748 | None:intergenic |
| AGGTCTTTGTGGCAGTAAAG+TGG | 0.540543 | 5.4:+68419169 | MS.gene39866:CDS |
| TCACTATGTTTGCTAGGCGC+AGG | 0.542051 | 5.4:-68422281 | None:intergenic |
| TCAAGAGTGGAAGGAAGAGC+CGG | 0.545999 | 5.4:+68422220 | MS.gene39866:CDS |
| GATAGAGCTGGAGAAAGATA+AGG | 0.546330 | 5.4:+68419561 | MS.gene39866:intron |
| GTTATCCCAGTATATGTCAC+GGG | 0.546554 | 5.4:-68419716 | None:intergenic |
| CGGGATGGATATATGCATCA+TGG | 0.546871 | 5.4:-68422157 | None:intergenic |
| GGATTCAACCTATAAACGAT+AGG | 0.548438 | 5.4:+68416606 | MS.gene39866:CDS |
| AAGAAATAAAGTTGTATCTG+AGG | 0.548593 | 5.4:-68421188 | None:intergenic |
| TCAAAGAACATGGCTTCACT+TGG | 0.548706 | 5.4:+68416512 | None:intergenic |
| ATACATAATGGTTGATGGAT+GGG | 0.551192 | 5.4:+68421031 | MS.gene39866:CDS |
| ACGCCGTCCTGACCAATTCA+CGG | 0.551285 | 5.4:+68418218 | MS.gene39866:CDS |
| GAGCCATCACTATGTTTGCT+AGG | 0.552271 | 5.4:-68422287 | None:intergenic |
| ACTGGGAGAGCGATGAGTAA+TGG | 0.553292 | 5.4:-68421822 | None:intergenic |
| GTGAAGAAGCAATGGATCCT+GGG | 0.559253 | 5.4:+68421141 | MS.gene39866:CDS |
| TCCAAACAAAACGCCAGTCG+CGG | 0.560248 | 5.4:+68422249 | MS.gene39866:CDS |
| GCATTCTGGCCTGATGTCCA+TGG | 0.563003 | 5.4:+68421720 | MS.gene39866:CDS |
| GTAAGAATGCAAATGCAGTA+AGG | 0.563890 | 5.4:-68416565 | None:intergenic |
| TCAATAATGGACTTGAGGAA+TGG | 0.570509 | 5.4:-68419877 | None:intergenic |
| GATTCAACCTATAAACGATA+GGG | 0.570671 | 5.4:+68416607 | MS.gene39866:CDS |
| ATAATGGTTGATGGATGGGC+AGG | 0.572967 | 5.4:+68421035 | MS.gene39866:CDS |
| TTCTGGGGAGCATAATTACC+GGG | 0.577184 | 5.4:+68420778 | MS.gene39866:CDS |
| TGTGATGAGTCAAGAGTGGA+AGG | 0.578062 | 5.4:+68422211 | MS.gene39866:CDS |
| AAGTGACTGTACGAATGCAA+TGG | 0.582913 | 5.4:-68419824 | None:intergenic |
| ATCAGTAGTGCCATGCATAG+AGG | 0.583391 | 5.4:-68422318 | None:intergenic |
| AATGGATGAGTAGTAAAAGC+AGG | 0.586318 | 5.4:-68421888 | None:intergenic |
| GTTTCCTTCAAAACTCGTTG+GGG | 0.588764 | 5.4:+68419622 | MS.gene39866:CDS |
| ACAAAAGCCCCTCCTTGCAG+TGG | 0.588776 | 5.4:-68416671 | None:intergenic |
| GTCCAGTCCACTGCAAGGAG+GGG | 0.589412 | 5.4:+68416664 | MS.gene39866:CDS |
| AGTTCATTAATGTGTTTCTG+GGG | 0.590166 | 5.4:+68420763 | MS.gene39866:CDS |
| AATAGCTTCAAAGCAATCCC+AGG | 0.590192 | 5.4:-68420636 | None:intergenic |
| TGATCATGTCCAAGTTCGAA+GGG | 0.591481 | 5.4:+68420685 | MS.gene39866:CDS |
| GGACCATAACAGAAAATGCT+AGG | 0.593519 | 5.4:-68417656 | None:intergenic |
| AAAAGACCGTGAAGAAGCAA+TGG | 0.595265 | 5.4:+68421133 | MS.gene39866:CDS |
| CTGGAAGATGTAATATCTTG+AGG | 0.595341 | 5.4:-68420742 | None:intergenic |
| ATGCAAATACAATACGTCCA+TGG | 0.598039 | 5.4:-68421737 | None:intergenic |
| CGTCATCTTTGAAAACGGGA+TGG | 0.599840 | 5.4:-68422172 | None:intergenic |
| GCATGAACTTCAGGAAGCAA+TGG | 0.600110 | 5.4:+68422079 | MS.gene39866:intron |
| CAAGATATAGCATGTCCAGA+AGG | 0.603409 | 5.4:-68418139 | None:intergenic |
| AGCAATGGTCAAAGACACAT+TGG | 0.604396 | 5.4:+68422094 | MS.gene39866:CDS |
| TCATTACAAGCCTCTATGCA+TGG | 0.608855 | 5.4:+68422308 | MS.gene39866:CDS |
| GCGCCTAGCAAACATAGTGA+TGG | 0.614282 | 5.4:+68422284 | MS.gene39866:CDS |
| TGACATATACTGGGATAACA+TGG | 0.614941 | 5.4:+68419720 | MS.gene39866:CDS |
| TGTTATCCCAGTATATGTCA+CGG | 0.616689 | 5.4:-68419717 | None:intergenic |
| GTATTGAAACCAATAGTCCC+AGG | 0.617054 | 5.4:-68421158 | None:intergenic |
| ACTTGAGGATCTACTTACTC+GGG | 0.622654 | 5.4:+68416813 | MS.gene39866:CDS |
| ACGTACCTATTTGATCCAAG+TGG | 0.632709 | 5.4:-68417759 | None:intergenic |
| GAAACCATATTGTCAAAACT+GGG | 0.637941 | 5.4:-68421839 | None:intergenic |
| GCTTCAAAGCAATCCCAGGA+AGG | 0.641603 | 5.4:-68420632 | None:intergenic |
| AGCTAATGTTTACCTGATGA+CGG | 0.643360 | 5.4:-68421292 | None:intergenic |
| GAGTTAGATATTGATCAGGA+TGG | 0.644477 | 5.4:-68418468 | None:intergenic |
| AGAGCCCCGTGACATATACT+GGG | 0.645760 | 5.4:+68419711 | MS.gene39866:CDS |
| TTAAGGTCCAGTCCACTGCA+AGG | 0.657871 | 5.4:+68416659 | MS.gene39866:CDS |
| GTGATGTGATGAGTCAAGAG+TGG | 0.660535 | 5.4:+68422207 | MS.gene39866:CDS |
| AGGTCCAGTCCACTGCAAGG+AGG | 0.672026 | 5.4:+68416662 | MS.gene39866:CDS |
| AATGGACTTGAGGAATGGTG+CGG | 0.681567 | 5.4:-68419872 | None:intergenic |
| TGTCATTGGTCCAATTGACA+GGG | 0.681640 | 5.4:-68417677 | None:intergenic |
| TTTCCGAAATGGTATCTGAG+GGG | 0.685701 | 5.4:+68416635 | MS.gene39866:CDS |
| GTGTGACTACAGCATACACA+AGG | 0.702184 | 5.4:-68421217 | None:intergenic |
| ATACCGTGAATTGGTCAGGA+CGG | 0.704095 | 5.4:-68418221 | None:intergenic |
| CCCGAACTAATTGAACACGC+AGG | 0.708798 | 5.4:+68416773 | MS.gene39866:CDS |
| TTATCCCAGTATATGTCACG+GGG | 0.723719 | 5.4:-68419715 | None:intergenic |
| AAAATGCTAGGAGTGAAATG+GGG | 0.730707 | 5.4:-68417644 | None:intergenic |
| ACTGATTCATCAGCATCAGG+CGG | 0.734704 | 5.4:-68418412 | None:intergenic |
| GATGGATATATGCATCATGG+AGG | 0.742987 | 5.4:-68422154 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAATAATAAATCATGTAT+TGG | - | chr5.4:68416918-68416937 | None:intergenic | 10.0% |
| !! | ATTATGAAAATCTTAATAAA+GGG | + | chr5.4:68419309-68419328 | MS.gene39866:intron | 10.0% |
| !! | TAATATAATATGATATTGTA+TGG | + | chr5.4:68420391-68420410 | MS.gene39866:intron | 10.0% |
| !! | TATTATGAAAATCTTAATAA+AGG | + | chr5.4:68419308-68419327 | MS.gene39866:intron | 10.0% |
| !! | TCAACTATTATAAAAAAAAA+AGG | - | chr5.4:68417522-68417541 | None:intergenic | 10.0% |
| !! | AAAAAAAAAAAAACCTGTAA+TGG | - | chr5.4:68421909-68421928 | None:intergenic | 15.0% |
| !! | AAACAAATTTGAATTTAGTA+AGG | + | chr5.4:68417387-68417406 | MS.gene39866:intron | 15.0% |
| !! | AAACCTATTAAAATTAAGTA+AGG | - | chr5.4:68417037-68417056 | None:intergenic | 15.0% |
| !! | AAAGAGAAAAATGTAATAAA+AGG | - | chr5.4:68419926-68419945 | None:intergenic | 15.0% |
| !! | AGAATTATGAAAATTAAGTA+AGG | + | chr5.4:68417448-68417467 | MS.gene39866:intron | 15.0% |
| !! | ATAAATCTTTATCATAGAAA+CGG | - | chr5.4:68418299-68418318 | None:intergenic | 15.0% |
| !! | ATAACATTACATTTCAATAA+TGG | - | chr5.4:68419893-68419912 | None:intergenic | 15.0% |
| !! | ATTTAACTAAAAAACCAATT+TGG | - | chr5.4:68419454-68419473 | None:intergenic | 15.0% |
| !! | CAAAAACTTAAAATTAAGTA+AGG | - | chr5.4:68416981-68417000 | None:intergenic | 15.0% |
| !! | CTTATTCATTTAAATAAACA+AGG | - | chr5.4:68417886-68417905 | None:intergenic | 15.0% |
| !! | GTTAAATAAATAGAAATTTC+AGG | + | chr5.4:68420279-68420298 | MS.gene39866:intron | 15.0% |
| !! | TTCAAAAATTTAAGAGTTTA+AGG | - | chr5.4:68417376-68417357 | None:intergenic | 15.0% |
| !! | TTTAAGTGATAAAATATCAA+AGG | - | chr5.4:68421089-68421108 | None:intergenic | 15.0% |
| !!! | AAAAAGGTTAAATATGTTTT+TGG | - | chr5.4:68417506-68417525 | None:intergenic | 15.0% |
| !!! | ACAAGTAAATTTTTTTTGTA+GGG | - | chr5.4:68417066-68417085 | None:intergenic | 15.0% |
| !!! | CTTACTTAATTTTAAGTTTT+TGG | + | chr5.4:68416979-68416998 | MS.gene39866:intron | 15.0% |
| !!! | TACAAGTAAATTTTTTTTGT+AGG | - | chr5.4:68417067-68417086 | None:intergenic | 15.0% |
| !!! | TATTACATTTTTCTCTTTAT+TGG | + | chr5.4:68419928-68419947 | MS.gene39866:intron | 15.0% |
| !! | AAAAATATCACTTAAGAGTA+AGG | - | chr5.4:68418876-68418895 | None:intergenic | 20.0% |
| !! | AAAATATCACTTAAGAGTAA+GGG | - | chr5.4:68418875-68418894 | None:intergenic | 20.0% |
| !! | AAACAAATTAATACATCTTC+TGG | + | chr5.4:68417985-68418004 | MS.gene39866:intron | 20.0% |
| !! | AAATCTTTCAAATTGAAGTT+TGG | - | chr5.4:68422134-68422153 | None:intergenic | 20.0% |
| !! | ATAATCTTACATTATCTCTT+AGG | - | chr5.4:68420341-68420360 | None:intergenic | 20.0% |
| !! | GAAAAGCTTAACAAATATTT+CGG | - | chr5.4:68418041-68418060 | None:intergenic | 20.0% |
| !! | TTATAGTAACTTGATACAAA+AGG | + | chr5.4:68420214-68420233 | MS.gene39866:intron | 20.0% |
| !! | TTCATGGTAAATATGTAAAA+GGG | - | chr5.4:68421524-68421543 | None:intergenic | 20.0% |
| !! | TTTCATGGTAAATATGTAAA+AGG | - | chr5.4:68421525-68421544 | None:intergenic | 20.0% |
| !! | TTTCTTCATAACATACATAA+TGG | + | chr5.4:68421019-68421038 | MS.gene39866:CDS | 20.0% |
| !!! | AAACAAACTTTGTTTTAACA+GGG | - | chr5.4:68417098-68417117 | None:intergenic | 20.0% |
| !!! | AAACAGAAAGCAATATTTTA+GGG | + | chr5.4:68421995-68422014 | MS.gene39866:intron | 20.0% |
| !!! | AGTCCTTACTTAATTTTAAT+AGG | + | chr5.4:68417031-68417050 | MS.gene39866:intron | 20.0% |
| !!! | ATAGAATACCTTTAAAAAGA+TGG | - | chr5.4:68419082-68419101 | None:intergenic | 20.0% |
| !!! | ATTTTAGTATTTTACATGAG+GGG | + | chr5.4:68421352-68421371 | MS.gene39866:intron | 20.0% |
| !!! | GAGTTAATTTTCTTTTTTTG+TGG | + | chr5.4:68422055-68422074 | MS.gene39866:intron | 20.0% |
| !!! | GATTTTAGTATTTTACATGA+GGG | + | chr5.4:68421351-68421370 | MS.gene39866:intron | 20.0% |
| !!! | TAAACAAACTTTGTTTTAAC+AGG | - | chr5.4:68417099-68417118 | None:intergenic | 20.0% |
| !!! | TAAACAGAAAGCAATATTTT+AGG | + | chr5.4:68421994-68422013 | MS.gene39866:intron | 20.0% |
| !!! | TGATTTTAGTATTTTACATG+AGG | + | chr5.4:68421350-68421369 | MS.gene39866:intron | 20.0% |
| !!! | TTTAAAACGACAAAAGTTAA+AGG | + | chr5.4:68417238-68417257 | MS.gene39866:intron | 20.0% |
| ! | AAACTAGAAATCCAACAATA+TGG | + | chr5.4:68419671-68419690 | MS.gene39866:CDS | 25.0% |
| ! | AAGAAATAAAGTTGTATCTG+AGG | - | chr5.4:68421191-68421210 | None:intergenic | 25.0% |
| ! | AAGGTAAAAGTAACAAAATC+TGG | + | chr5.4:68417257-68417276 | MS.gene39866:intron | 25.0% |
| ! | AATTTGTCAATATAGACTTC+AGG | + | chr5.4:68416699-68416718 | MS.gene39866:CDS | 25.0% |
| ! | ACAGTCATATATATATGCAT+AGG | - | chr5.4:68420863-68420882 | None:intergenic | 25.0% |
| ! | AGAAGAAGAAAAAACAGAAT+TGG | + | chr5.4:68418940-68418959 | MS.gene39866:CDS | 25.0% |
| ! | ATAACATACATAATGGTTGA+TGG | + | chr5.4:68421026-68421045 | MS.gene39866:CDS | 25.0% |
| ! | ATATTGTTGGCAAAAAAATG+AGG | - | chr5.4:68420662-68420681 | None:intergenic | 25.0% |
| ! | ATCTTATTCAATTGAATTGC+AGG | + | chr5.4:68417607-68417626 | MS.gene39866:intron | 25.0% |
| ! | ATTATGAACAAATCATGTAC+AGG | - | chr5.4:68420934-68420953 | None:intergenic | 25.0% |
| ! | CTAAAATGATAGACTATAGA+TGG | - | chr5.4:68417834-68417853 | None:intergenic | 25.0% |
| ! | CTTAACAAATATTTCGGTTA+GGG | - | chr5.4:68418035-68418054 | None:intergenic | 25.0% |
| ! | GAGAATTATATCTTGTTAAC+TGG | + | chr5.4:68418717-68418736 | MS.gene39866:intron | 25.0% |
| ! | TACATGCACTAAAATACTTA+AGG | - | chr5.4:68421627-68421646 | None:intergenic | 25.0% |
| ! | TCAATTTCAAATATTCCACT+TGG | + | chr5.4:68417744-68417763 | MS.gene39866:CDS | 25.0% |
| ! | TCACTTAAAGAATTTCTTGT+TGG | + | chr5.4:68421100-68421119 | MS.gene39866:CDS | 25.0% |
| !! | AGATTTTCATAATACAAGTG+TGG | - | chr5.4:68419302-68419321 | None:intergenic | 25.0% |
| !! | ATACAACTTTATTTCTTGCT+TGG | + | chr5.4:68421194-68421213 | MS.gene39866:CDS | 25.0% |
| !! | ATAGAATTGTTTAGAGTTAG+AGG | - | chr5.4:68417944-68417963 | None:intergenic | 25.0% |
| !! | TAGAAGTTCCCAATTTTATA+GGG | - | chr5.4:68417006-68417025 | None:intergenic | 25.0% |
| !! | TATGAATTTGAAGTCATAAC+AGG | - | chr5.4:68418624-68418643 | None:intergenic | 25.0% |
| !! | TCATTACTTATTGCAGATTT+TGG | + | chr5.4:68418088-68418107 | MS.gene39866:intron | 25.0% |
| !! | TTAATACATCTTCTGGTTAT+TGG | + | chr5.4:68417992-68418011 | MS.gene39866:intron | 25.0% |
| !! | TTAGAAGTTCCCAATTTTAT+AGG | - | chr5.4:68417007-68417026 | None:intergenic | 25.0% |
| !! | TTTTGACAATATGGTTTCAT+CGG | + | chr5.4:68421844-68421863 | MS.gene39866:CDS | 25.0% |
| !!! | AACAGAAAGCAATATTTTAG+GGG | + | chr5.4:68421996-68422015 | MS.gene39866:intron | 25.0% |
| !!! | AATCTTGCGATAATTTTTTG+TGG | + | chr5.4:68417292-68417311 | MS.gene39866:intron | 25.0% |
| !!! | GAGTGCATAAATTTTTTGTA+GGG | + | chr5.4:68417419-68417438 | MS.gene39866:intron | 25.0% |
| !!! | TAAAGTTTGTAGTTCTGAAT+CGG | + | chr5.4:68416862-68416881 | MS.gene39866:intron | 25.0% |
| !!! | TCGATTTTAATATATGCTCA+TGG | - | chr5.4:68421601-68421620 | None:intergenic | 25.0% |
| !!! | TGAGTGCATAAATTTTTTGT+AGG | + | chr5.4:68417418-68417437 | MS.gene39866:intron | 25.0% |
| !!! | TTTTTGGTCCCTATAAAATT+GGG | + | chr5.4:68416995-68417014 | MS.gene39866:intron | 25.0% |
| !!! | TTTTTGGTCCCTATAAAATT+GGG | - | chr5.4:68417014-68416995 | None:intergenic | 25.0% |
| AAATACACCCTATCGTTTAT+AGG | - | chr5.4:68416617-68416636 | None:intergenic | 30.0% | |
| AAATACTAATCCCTATGTGT+AGG | + | chr5.4:68420239-68420258 | MS.gene39866:intron | 30.0% | |
| AACAATATGGTTGACTGAAT+GGG | + | chr5.4:68419684-68419703 | MS.gene39866:CDS | 30.0% | |
| AACAGATTTGGAAGATGATT+TGG | - | chr5.4:68419058-68419077 | None:intergenic | 30.0% | |
| AAGCAAAGGTTACAAATATG+AGG | - | chr5.4:68419404-68419423 | None:intergenic | 30.0% | |
| AAGTAAGGACTAAACTTAGA+AGG | + | chr5.4:68417463-68417482 | MS.gene39866:intron | 30.0% | |
| ATATTCCACTTGGATCAAAT+AGG | + | chr5.4:68417754-68417773 | MS.gene39866:CDS | 30.0% | |
| ATGATGTATGGAAGTAGAAA+TGG | - | chr5.4:68421242-68421261 | None:intergenic | 30.0% | |
| ATTGGTTAAAATCTACTCTC+TGG | - | chr5.4:68416900-68416919 | None:intergenic | 30.0% | |
| CAATGCAAAATAACGATTCT+GGG | + | chr5.4:68418790-68418809 | MS.gene39866:intron | 30.0% | |
| CAGTTCATTAATGTGTTTCT+GGG | + | chr5.4:68420762-68420781 | MS.gene39866:CDS | 30.0% | |
| CATAACATTAACATCTACCA+TGG | - | chr5.4:68420565-68420584 | None:intergenic | 30.0% | |
| CATACATAAGGTTCTTAAAC+TGG | + | chr5.4:68416723-68416742 | MS.gene39866:CDS | 30.0% | |
| CATATGTTTCTCTCTCAATA+AGG | + | chr5.4:68419749-68419768 | MS.gene39866:CDS | 30.0% | |
| CCAAAAAAGACAATGATGTA+TGG | - | chr5.4:68421254-68421273 | None:intergenic | 30.0% | |
| CTTATTGAGAGAGAAACATA+TGG | - | chr5.4:68419751-68419770 | None:intergenic | 30.0% | |
| GAAAACACAATGAAACAACT+TGG | - | chr5.4:68418853-68418872 | None:intergenic | 30.0% | |
| GAAACCATATTGTCAAAACT+GGG | - | chr5.4:68421842-68421861 | None:intergenic | 30.0% | |
| GACATGATCATCAATATTGT+TGG | - | chr5.4:68420675-68420694 | None:intergenic | 30.0% | |
| GACATGCTATATCTTGAAAA+GGG | + | chr5.4:68418146-68418165 | MS.gene39866:CDS | 30.0% | |
| GATTCAACCTATAAACGATA+GGG | + | chr5.4:68416607-68416626 | MS.gene39866:CDS | 30.0% | |
| GCAATGATGAAAATAAGCAA+AGG | - | chr5.4:68419418-68419437 | None:intergenic | 30.0% | |
| GCTTAACAAATATTTCGGTT+AGG | - | chr5.4:68418036-68418055 | None:intergenic | 30.0% | |
| GTCATATATATATGCATAGG+AGG | - | chr5.4:68420860-68420879 | None:intergenic | 30.0% | |
| TAAAAAGATGGCAACAGATT+TGG | - | chr5.4:68419070-68419089 | None:intergenic | 30.0% | |
| TATCTAGTCTGATTACATCA+CGG | + | chr5.4:68420447-68420466 | MS.gene39866:intron | 30.0% | |
| TCAATAAGGAGACTTGTAAT+TGG | + | chr5.4:68419763-68419782 | MS.gene39866:CDS | 30.0% | |
| TCAATGCAAAATAACGATTC+TGG | + | chr5.4:68418789-68418808 | MS.gene39866:intron | 30.0% | |
| TCTTGAAACTAGAAAAACGT+AGG | - | chr5.4:68417550-68417569 | None:intergenic | 30.0% | |
| TGAAACCATATTGTCAAAAC+TGG | - | chr5.4:68421843-68421862 | None:intergenic | 30.0% | |
| TGATCAATATCTAACTCATC+AGG | + | chr5.4:68418474-68418493 | MS.gene39866:CDS | 30.0% | |
| TGATGAGTTAGATATTGATC+AGG | - | chr5.4:68418475-68418494 | None:intergenic | 30.0% | |
| TGCAATAAGTAATGAGTTAC+TGG | - | chr5.4:68418083-68418102 | None:intergenic | 30.0% | |
| TTCAGAACTACAAACTTTAG+AGG | - | chr5.4:68416861-68416880 | None:intergenic | 30.0% | |
| ! | AAGAAGGTGCAAAAAAAGAA+TGG | - | chr5.4:68417809-68417828 | None:intergenic | 30.0% |
| ! | AGTTCATTAATGTGTTTCTG+GGG | + | chr5.4:68420763-68420782 | MS.gene39866:CDS | 30.0% |
| ! | ATCTGTTGCCATCTTTTTAA+AGG | + | chr5.4:68419071-68419090 | MS.gene39866:intron | 30.0% |
| ! | ATGAAGAAAGTTGCTTTCAT+TGG | - | chr5.4:68421008-68421027 | None:intergenic | 30.0% |
| ! | ATTCTAGAAACGAATCCATA+AGG | + | chr5.4:68418985-68419004 | MS.gene39866:CDS | 30.0% |
| ! | CATGTTTAGAACACTATGAA+AGG | + | chr5.4:68417161-68417180 | MS.gene39866:intron | 30.0% |
| ! | GCTAGTTGAACATTTCTTTT+TGG | + | chr5.4:68418441-68418460 | MS.gene39866:CDS | 30.0% |
| ! | GTCATCAAGTCTTTTATACA+AGG | + | chr5.4:68420606-68420625 | MS.gene39866:CDS | 30.0% |
| ! | TAATGTTTTCCGATACCTTT+GGG | + | chr5.4:68418760-68418779 | MS.gene39866:intron | 30.0% |
| ! | TAGAAGGTCCCAATTTTATA+GGG | + | chr5.4:68417479-68417498 | MS.gene39866:intron | 30.0% |
| ! | TATTAATGTCTGAAACTGAC+TGG | + | chr5.4:68421655-68421674 | MS.gene39866:intron | 30.0% |
| ! | TTAGAAGGTCCCAATTTTAT+AGG | + | chr5.4:68417478-68417497 | MS.gene39866:intron | 30.0% |
| ! | TTGCATTGAATTTTACCCAA+AGG | - | chr5.4:68418778-68418797 | None:intergenic | 30.0% |
| ! | TTTTACTACTCATCCATTAC+AGG | + | chr5.4:68421893-68421912 | MS.gene39866:CDS | 30.0% |
| !! | ACATTTCAATAATGGACTTG+AGG | - | chr5.4:68419885-68419904 | None:intergenic | 30.0% |
| !! | AGATGACATACCTTTTTAGT+TGG | - | chr5.4:68419011-68419030 | None:intergenic | 30.0% |
| !! | ATACATAATGGTTGATGGAT+GGG | + | chr5.4:68421031-68421050 | MS.gene39866:CDS | 30.0% |
| !! | ATTCTGGGATGAATTCTTAT+TGG | + | chr5.4:68418805-68418824 | MS.gene39866:intron | 30.0% |
| !! | CTCTTAAGTGATATTTTTGC+AGG | + | chr5.4:68418878-68418897 | MS.gene39866:intron | 30.0% |
| !! | TGAATTTTACCCAAAGGTAT+CGG | - | chr5.4:68418772-68418791 | None:intergenic | 30.0% |
| !!! | CATCATTGTCTTTTTTGGTT+TGG | + | chr5.4:68421256-68421275 | MS.gene39866:CDS | 30.0% |
| !!! | CCATACATCATTGTCTTTTT+TGG | + | chr5.4:68421251-68421270 | MS.gene39866:CDS | 30.0% |
| !!! | GTTTTTGGTCCCTATAAAAT+TGG | + | chr5.4:68416994-68417013 | MS.gene39866:intron | 30.0% |
| !!! | GTTTTTGGTCCCTATAAAAT+TGG | - | chr5.4:68417013-68416994 | None:intergenic | 30.0% |
| AAAATGCTAGGAGTGAAATG+GGG | - | chr5.4:68417647-68417666 | None:intergenic | 35.0% | |
| AAATATGTAAAAGGGCAACC+CGG | - | chr5.4:68421516-68421535 | None:intergenic | 35.0% | |
| AACCACATTTGAACGTTTCA+AGG | - | chr5.4:68417703-68417722 | None:intergenic | 35.0% | |
| AACTTGATCATACCGTGAAT+TGG | - | chr5.4:68418233-68418252 | None:intergenic | 35.0% | |
| AAGAAGCAGGTTCAAAACAT+AGG | - | chr5.4:68422026-68422045 | None:intergenic | 35.0% | |
| AATGGATGAGTAGTAAAAGC+AGG | - | chr5.4:68421891-68421910 | None:intergenic | 35.0% | |
| ACACAATGAAACAACTTGGT+AGG | - | chr5.4:68418849-68418868 | None:intergenic | 35.0% | |
| ACTTATAAACCCTTCGAACT+TGG | - | chr5.4:68420697-68420716 | None:intergenic | 35.0% | |
| AGAAAATGCTAGGAGTGAAA+TGG | - | chr5.4:68417649-68417668 | None:intergenic | 35.0% | |
| AGAAGCAGGTTCAAAACATA+GGG | - | chr5.4:68422025-68422044 | None:intergenic | 35.0% | |
| AGCTAATGTTTACCTGATGA+CGG | - | chr5.4:68421295-68421314 | None:intergenic | 35.0% | |
| ATCCATAAGGCCAACTAAAA+AGG | + | chr5.4:68418998-68419017 | MS.gene39866:CDS | 35.0% | |
| ATCGAAACACCAATTGTCTT+TGG | - | chr5.4:68420984-68421003 | None:intergenic | 35.0% | |
| ATGCAAATACAATACGTCCA+TGG | - | chr5.4:68421740-68421759 | None:intergenic | 35.0% | |
| ATGTTGTGTGTGTACAACTT+TGG | + | chr5.4:68421554-68421573 | MS.gene39866:intron | 35.0% | |
| CAACAATATGGTTGACTGAA+TGG | + | chr5.4:68419683-68419702 | MS.gene39866:CDS | 35.0% | |
| CATTCAGTCAACCATATTGT+TGG | - | chr5.4:68419685-68419704 | None:intergenic | 35.0% | |
| CCAGAAACACATTAATGAAC+TGG | - | chr5.4:68420764-68420783 | None:intergenic | 35.0% | |
| CCAGTTCATTAATGTGTTTC+TGG | + | chr5.4:68420761-68420780 | MS.gene39866:CDS | 35.0% | |
| CGTTAAATTTCAGATAGAGC+TGG | + | chr5.4:68419549-68419568 | MS.gene39866:intron | 35.0% | |
| CTGGAAGATGTAATATCTTG+AGG | - | chr5.4:68420745-68420764 | None:intergenic | 35.0% | |
| GAAAATGCTAGGAGTGAAAT+GGG | - | chr5.4:68417648-68417667 | None:intergenic | 35.0% | |
| GAGTTAGATATTGATCAGGA+TGG | - | chr5.4:68418471-68418490 | None:intergenic | 35.0% | |
| GGACATGCTATATCTTGAAA+AGG | + | chr5.4:68418145-68418164 | MS.gene39866:CDS | 35.0% | |
| GGATTCAACCTATAAACGAT+AGG | + | chr5.4:68416606-68416625 | MS.gene39866:CDS | 35.0% | |
| GTAAGAATGCAAATGCAGTA+AGG | - | chr5.4:68416568-68416587 | None:intergenic | 35.0% | |
| GTCTCACAACTTCTGTTAAT+GGG | + | chr5.4:68421765-68421784 | MS.gene39866:CDS | 35.0% | |
| GTTTATAAGTCAGTCTTCTC+TGG | + | chr5.4:68420707-68420726 | MS.gene39866:CDS | 35.0% | |
| TACTGCATTTGCATTCTTAC+TGG | + | chr5.4:68416568-68416587 | MS.gene39866:CDS | 35.0% | |
| TACTTGAGGATCTACTTACT+CGG | + | chr5.4:68416812-68416831 | MS.gene39866:CDS | 35.0% | |
| TAGACTATAGATGGCAAAGA+AGG | - | chr5.4:68417825-68417844 | None:intergenic | 35.0% | |
| TAGACTTCAGGTCATACATA+AGG | + | chr5.4:68416711-68416730 | MS.gene39866:CDS | 35.0% | |
| TATGTGCAGTTACAGAAAAC+AGG | - | chr5.4:68418506-68418525 | None:intergenic | 35.0% | |
| TCAATGTAGTCCTACACATA+GGG | - | chr5.4:68420252-68420271 | None:intergenic | 35.0% | |
| TCTTGTGTAAAAACAGGGTA+AGG | + | chr5.4:68421424-68421443 | MS.gene39866:intron | 35.0% | |
| TGACATATACTGGGATAACA+TGG | + | chr5.4:68419720-68419739 | MS.gene39866:CDS | 35.0% | |
| TGCAGAATTCCAAAGACAAT+TGG | + | chr5.4:68420972-68420991 | MS.gene39866:intron | 35.0% | |
| TGGAAGTTTATGTCTTTCAC+TGG | + | chr5.4:68420477-68420496 | MS.gene39866:intron | 35.0% | |
| TGTCTCACAACTTCTGTTAA+TGG | + | chr5.4:68421764-68421783 | MS.gene39866:CDS | 35.0% | |
| TGTGACCAACTAGAATTACA+TGG | - | chr5.4:68419126-68419145 | None:intergenic | 35.0% | |
| TGTTATCCCAGTATATGTCA+CGG | - | chr5.4:68419720-68419739 | None:intergenic | 35.0% | |
| TGTTTCCTTCAAAACTCGTT+GGG | + | chr5.4:68419621-68419640 | MS.gene39866:CDS | 35.0% | |
| TTATACAAGGTTTCCTTCCT+GGG | + | chr5.4:68420619-68420638 | MS.gene39866:CDS | 35.0% | |
| TTGTTTCCTTCAAAACTCGT+TGG | + | chr5.4:68419620-68419639 | MS.gene39866:CDS | 35.0% | |
| TTTATACAAGGTTTCCTTCC+TGG | + | chr5.4:68420618-68420637 | MS.gene39866:CDS | 35.0% | |
| ! | ACTCAAGCTTTATAAGAAGC+AGG | - | chr5.4:68422039-68422058 | None:intergenic | 35.0% |
| ! | ACTCCTAGCATTTTCTGTTA+TGG | + | chr5.4:68417653-68417672 | MS.gene39866:CDS | 35.0% |
| ! | ATAGGGTGTATTTTCCGAAA+TGG | + | chr5.4:68416624-68416643 | MS.gene39866:CDS | 35.0% |
| ! | ATTTTCCGAAATGGTATCTG+AGG | + | chr5.4:68416633-68416652 | MS.gene39866:CDS | 35.0% |
| ! | ATTTTGGACTCACTTGGTAA+TGG | + | chr5.4:68418104-68418123 | MS.gene39866:CDS | 35.0% |
| ! | CAACATAGCACTCATTTTCA+TGG | - | chr5.4:68421540-68421559 | None:intergenic | 35.0% |
| ! | CAGTCACTTGCTAATATAGA+AGG | + | chr5.4:68419838-68419857 | MS.gene39866:CDS | 35.0% |
| ! | CTTTGATAACTGTCTATCCA+TGG | + | chr5.4:68420545-68420564 | MS.gene39866:intron | 35.0% |
| ! | GTAATGTTTTCCGATACCTT+TGG | + | chr5.4:68418759-68418778 | MS.gene39866:intron | 35.0% |
| ! | TATAGGTTGAATCCGAAGTA+TGG | - | chr5.4:68416600-68416619 | None:intergenic | 35.0% |
| ! | TTTTCCGAAATGGTATCTGA+GGG | + | chr5.4:68416634-68416653 | MS.gene39866:CDS | 35.0% |
| !! | CATACATAATGGTTGATGGA+TGG | + | chr5.4:68421030-68421049 | MS.gene39866:CDS | 35.0% |
| !! | TCAATAATGGACTTGAGGAA+TGG | - | chr5.4:68419880-68419899 | None:intergenic | 35.0% |
| !!! | ACGAGTTTTGAAGGAAACAA+AGG | - | chr5.4:68419620-68419639 | None:intergenic | 35.0% |
| !!! | CGTTTTGTTTGGACAATTAC+CGG | - | chr5.4:68422242-68422261 | None:intergenic | 35.0% |
| !!! | TACCTTTTTAGTTGGCCTTA+TGG | - | chr5.4:68419003-68419022 | None:intergenic | 35.0% |
| !!! | TTACCCTGTTTTTACACAAG+AGG | - | chr5.4:68421425-68421444 | None:intergenic | 35.0% |
| !!! | TTCTGGTTATTGGTTTTACG+AGG | + | chr5.4:68418002-68418021 | MS.gene39866:intron | 35.0% |
| AAAAGACCGTGAAGAAGCAA+TGG | + | chr5.4:68421133-68421152 | MS.gene39866:CDS | 40.0% | |
| AAACCCCTCAGATACCATTT+CGG | - | chr5.4:68416641-68416660 | None:intergenic | 40.0% | |
| AAGTGACTGTACGAATGCAA+TGG | - | chr5.4:68419827-68419846 | None:intergenic | 40.0% | |
| AATAGCTTCAAAGCAATCCC+AGG | - | chr5.4:68420639-68420658 | None:intergenic | 40.0% | |
| AATAGCTTGAACAACCCATC+TGG | + | chr5.4:68420042-68420061 | MS.gene39866:intron | 40.0% | |
| AATGGTATCTGAGGGGTTTA+AGG | + | chr5.4:68416642-68416661 | MS.gene39866:CDS | 40.0% | |
| AATTGCTTGAAGAAGGAGCA+TGG | - | chr5.4:68418357-68418376 | None:intergenic | 40.0% | |
| ACAGCCTCTTGTGTAAAAAC+AGG | + | chr5.4:68421418-68421437 | MS.gene39866:intron | 40.0% | |
| ACGTACCTATTTGATCCAAG+TGG | - | chr5.4:68417762-68417781 | None:intergenic | 40.0% | |
| ACTTGAGGATCTACTTACTC+GGG | + | chr5.4:68416813-68416832 | MS.gene39866:CDS | 40.0% | |
| AGCAATGGTCAAAGACACAT+TGG | + | chr5.4:68422094-68422113 | MS.gene39866:CDS | 40.0% | |
| AGGACACAAGTTCTCTTGTA+TGG | - | chr5.4:68419384-68419403 | None:intergenic | 40.0% | |
| AGTGACTGTACGAATGCAAT+GGG | - | chr5.4:68419826-68419845 | None:intergenic | 40.0% | |
| ATAGCTTGAACAACCCATCT+GGG | + | chr5.4:68420043-68420062 | MS.gene39866:intron | 40.0% | |
| ATATCTTGTCTACCGTCATC+AGG | + | chr5.4:68421280-68421299 | MS.gene39866:CDS | 40.0% | |
| ATGATCATGTCCAAGTTCGA+AGG | + | chr5.4:68420684-68420703 | MS.gene39866:CDS | 40.0% | |
| CAAGATATAGCATGTCCAGA+AGG | - | chr5.4:68418142-68418161 | None:intergenic | 40.0% | |
| CAATTACTGTGCATTTGTGC+AGG | + | chr5.4:68418372-68418391 | MS.gene39866:intron | 40.0% | |
| CACCTTGAAACGTTCAAATG+TGG | + | chr5.4:68417698-68417717 | MS.gene39866:CDS | 40.0% | |
| CAGCCTCTTGTGTAAAAACA+GGG | + | chr5.4:68421419-68421438 | MS.gene39866:intron | 40.0% | |
| CATTTGTGCAGGTACTTGTT+AGG | + | chr5.4:68418383-68418402 | MS.gene39866:intron | 40.0% | |
| CGTACAATACACCAAATGGT+GGG | + | chr5.4:68421450-68421469 | MS.gene39866:intron | 40.0% | |
| GATAGAGCTGGAGAAAGATA+AGG | + | chr5.4:68419561-68419580 | MS.gene39866:intron | 40.0% | |
| GATGGATATATGCATCATGG+AGG | - | chr5.4:68422157-68422176 | None:intergenic | 40.0% | |
| GATTACATCACGGAATATGC+TGG | + | chr5.4:68420457-68420476 | MS.gene39866:intron | 40.0% | |
| GCACAGTAATTGCTTGAAGA+AGG | - | chr5.4:68418364-68418383 | None:intergenic | 40.0% | |
| GCTGCTGGCATTATAGATTT+AGG | - | chr5.4:68419598-68419617 | None:intergenic | 40.0% | |
| GGACCATAACAGAAAATGCT+AGG | - | chr5.4:68417659-68417678 | None:intergenic | 40.0% | |
| GTATTGAAACCAATAGTCCC+AGG | - | chr5.4:68421161-68421180 | None:intergenic | 40.0% | |
| GTCAATGTAGTCCTACACAT+AGG | - | chr5.4:68420253-68420272 | None:intergenic | 40.0% | |
| GTTATCCCAGTATATGTCAC+GGG | - | chr5.4:68419719-68419738 | None:intergenic | 40.0% | |
| GTTCATAGAGACAGGATTAC+TGG | - | chr5.4:68419034-68419053 | None:intergenic | 40.0% | |
| GTTTCCTTCAAAACTCGTTG+GGG | + | chr5.4:68419622-68419641 | MS.gene39866:CDS | 40.0% | |
| TACTGGCATTTGCCATACTT+CGG | + | chr5.4:68416585-68416604 | MS.gene39866:CDS | 40.0% | |
| TCATTACAAGCCTCTATGCA+TGG | + | chr5.4:68422308-68422327 | MS.gene39866:CDS | 40.0% | |
| TGATCATGTCCAAGTTCGAA+GGG | + | chr5.4:68420685-68420704 | MS.gene39866:CDS | 40.0% | |
| TGGATTCTGCTGTATACTTG+AGG | + | chr5.4:68416798-68416817 | MS.gene39866:CDS | 40.0% | |
| TGGCACCATGTAATTCTAGT+TGG | + | chr5.4:68419118-68419137 | MS.gene39866:intron | 40.0% | |
| TGTCATTGGTCCAATTGACA+GGG | - | chr5.4:68417680-68417699 | None:intergenic | 40.0% | |
| TTATCCCAGTATATGTCACG+GGG | - | chr5.4:68419718-68419737 | None:intergenic | 40.0% | |
| TTTCCGAAATGGTATCTGAG+GGG | + | chr5.4:68416635-68416654 | MS.gene39866:CDS | 40.0% | |
| ! | AACCAAGAATATGAGAGTGC+TGG | + | chr5.4:68421696-68421715 | MS.gene39866:CDS | 40.0% |
| ! | ATTGCTTGAAGAAGGAGCAT+GGG | - | chr5.4:68418356-68418375 | None:intergenic | 40.0% |
| ! | CATCCCGTTTTCAAAGATGA+CGG | + | chr5.4:68422173-68422192 | MS.gene39866:CDS | 40.0% |
| ! | GATTTGGAGTTCATAGAGAC+AGG | - | chr5.4:68419042-68419061 | None:intergenic | 40.0% |
| ! | GTCTCCGTCATCTTTGAAAA+CGG | - | chr5.4:68422180-68422199 | None:intergenic | 40.0% |
| ! | TAGAATTACATGGTGCCAGA+GGG | - | chr5.4:68419116-68419135 | None:intergenic | 40.0% |
| ! | TCTCCGTCATCTTTGAAAAC+GGG | - | chr5.4:68422179-68422198 | None:intergenic | 40.0% |
| ! | TGAACGTTTCAAGGTGTCAT+TGG | - | chr5.4:68417694-68417713 | None:intergenic | 40.0% |
| ! | TGGCTTATGCTTTTACCTTC+TGG | + | chr5.4:68418124-68418143 | MS.gene39866:CDS | 40.0% |
| ! | TGTTCAATTAGTTCGGGTTC+CGG | - | chr5.4:68416770-68416789 | None:intergenic | 40.0% |
| ! | TTGCAGATTTTGGACTCACT+TGG | + | chr5.4:68418098-68418117 | MS.gene39866:intron | 40.0% |
| ! | TTTCTGGGGAGCATAATTAC+CGG | + | chr5.4:68420777-68420796 | MS.gene39866:CDS | 40.0% |
| ! | TTTTACATGAGGGGTAACCT+TGG | + | chr5.4:68421361-68421380 | MS.gene39866:intron | 40.0% |
| ! | TTTTGTGGTGCATGAACTTC+AGG | + | chr5.4:68422070-68422089 | MS.gene39866:intron | 40.0% |
| !! | CTCTCCCAGTTTTGACAATA+TGG | + | chr5.4:68421835-68421854 | MS.gene39866:CDS | 40.0% |
| !! | GAAAAGCATCAAAACAGCGA+AGG | - | chr5.4:68421325-68421344 | None:intergenic | 40.0% |
| !! | GATGTGCTGGTGAGATTTTA+AGG | + | chr5.4:68421057-68421076 | MS.gene39866:CDS | 40.0% |
| !! | GGGACTATTGGTTTCAATAC+AGG | + | chr5.4:68421161-68421180 | MS.gene39866:CDS | 40.0% |
| !!! | ACTGGCTTTTTAGGTCTTTG+TGG | + | chr5.4:68419158-68419177 | MS.gene39866:CDS | 40.0% |
| !!! | ATGGTTTCATCGGTTTTGCA+AGG | + | chr5.4:68421854-68421873 | MS.gene39866:CDS | 40.0% |
| !!! | TGGTTTCATCGGTTTTGCAA+GGG | + | chr5.4:68421855-68421874 | MS.gene39866:CDS | 40.0% |
| ACAATACGTCCATGGACATC+AGG | - | chr5.4:68421732-68421751 | None:intergenic | 45.0% | |
| ACTAATTGAACACGCAGGCT+TGG | + | chr5.4:68416778-68416797 | MS.gene39866:CDS | 45.0% | |
| AGGTCTTTGTGGCAGTAAAG+TGG | + | chr5.4:68419169-68419188 | MS.gene39866:CDS | 45.0% | |
| ATACCGTGAATTGGTCAGGA+CGG | - | chr5.4:68418224-68418243 | None:intergenic | 45.0% | |
| ATCAGTAGTGCCATGCATAG+AGG | - | chr5.4:68422321-68422340 | None:intergenic | 45.0% | |
| ATGGCTTCACTTGGCGATAT+AGG | + | chr5.4:68416521-68416540 | MS.gene39866:CDS | 45.0% | |
| CAGGATCCATTGCTTCTTCA+CGG | - | chr5.4:68421142-68421161 | None:intergenic | 45.0% | |
| CAGTGCATGCTTCTCCAAAT+TGG | + | chr5.4:68419437-68419456 | MS.gene39866:intron | 45.0% | |
| CCAGATGAAGAGAGGCAATT+AGG | - | chr5.4:68418529-68418548 | None:intergenic | 45.0% | |
| CCTAATTGCCTCTCTTCATC+TGG | + | chr5.4:68418526-68418545 | MS.gene39866:intron | 45.0% | |
| CCTGCGTGTTCAATTAGTTC+GGG | - | chr5.4:68416776-68416795 | None:intergenic | 45.0% | |
| CGGGATGGATATATGCATCA+TGG | - | chr5.4:68422160-68422179 | None:intergenic | 45.0% | |
| CTATTTCCCTTTCTTCCCTC+TGG | + | chr5.4:68419098-68419117 | MS.gene39866:intron | 45.0% | |
| CTCCAGCACTCTCATATTCT+TGG | - | chr5.4:68421701-68421720 | None:intergenic | 45.0% | |
| CTGTTATGGTCCCTGTCAAT+TGG | + | chr5.4:68417667-68417686 | MS.gene39866:CDS | 45.0% | |
| CTTGAGAGGAGCAAACTCTA+AGG | - | chr5.4:68420099-68420118 | None:intergenic | 45.0% | |
| GAGCCATCACTATGTTTGCT+AGG | - | chr5.4:68422290-68422309 | None:intergenic | 45.0% | |
| GATCATACCGTGAATTGGTC+AGG | - | chr5.4:68418228-68418247 | None:intergenic | 45.0% | |
| GCATGAACTTCAGGAAGCAA+TGG | + | chr5.4:68422079-68422098 | MS.gene39866:intron | 45.0% | |
| GCCTGCGTGTTCAATTAGTT+CGG | - | chr5.4:68416777-68416796 | None:intergenic | 45.0% | |
| GCGTACAATACACCAAATGG+TGG | + | chr5.4:68421449-68421468 | MS.gene39866:intron | 45.0% | |
| GCTGCGTACAATACACCAAA+TGG | + | chr5.4:68421446-68421465 | MS.gene39866:intron | 45.0% | |
| GTGAAGAAGCAATGGATCCT+GGG | + | chr5.4:68421141-68421160 | MS.gene39866:CDS | 45.0% | |
| GTGATGTGATGAGTCAAGAG+TGG | + | chr5.4:68422207-68422226 | MS.gene39866:CDS | 45.0% | |
| GTGTGACTACAGCATACACA+AGG | - | chr5.4:68421220-68421239 | None:intergenic | 45.0% | |
| TACAAGCTCCAGATGAAGAG+AGG | - | chr5.4:68418537-68418556 | None:intergenic | 45.0% | |
| TAGTTGTTGGAATGCAGTCC+CGG | - | chr5.4:68420799-68420818 | None:intergenic | 45.0% | |
| TGTGATGAGTCAAGAGTGGA+AGG | + | chr5.4:68422211-68422230 | MS.gene39866:CDS | 45.0% | |
| TTGAAGGAAACAAAGGCTGC+TGG | - | chr5.4:68419613-68419632 | None:intergenic | 45.0% | |
| ! | AATGGACTTGAGGAATGGTG+CGG | - | chr5.4:68419875-68419894 | None:intergenic | 45.0% |
| ! | ACTGATTCATCAGCATCAGG+CGG | - | chr5.4:68418415-68418434 | None:intergenic | 45.0% |
| ! | ATTCTCCCTGGTGCTAAGTT+TGG | + | chr5.4:68420131-68420150 | MS.gene39866:intron | 45.0% |
| ! | CGTCATCTTTGAAAACGGGA+TGG | - | chr5.4:68422175-68422194 | None:intergenic | 45.0% |
| ! | CTAGAATTACATGGTGCCAG+AGG | - | chr5.4:68419117-68419136 | None:intergenic | 45.0% |
| ! | CTGACTGATTCATCAGCATC+AGG | - | chr5.4:68418418-68418437 | None:intergenic | 45.0% |
| ! | CTTAGAGTTTGCTCCTCTCA+AGG | + | chr5.4:68420097-68420116 | MS.gene39866:intron | 45.0% |
| ! | GTGTCATTGGTCCAATTGAC+AGG | - | chr5.4:68417681-68417700 | None:intergenic | 45.0% |
| ! | TTACACAAGAGGCTGTTTCC+AGG | - | chr5.4:68421414-68421433 | None:intergenic | 45.0% |
| ! | TTCTGGGGAGCATAATTACC+GGG | + | chr5.4:68420778-68420797 | MS.gene39866:CDS | 45.0% |
| ! | TTGCTTGAAGAAGGAGCATG+GGG | - | chr5.4:68418355-68418374 | None:intergenic | 45.0% |
| !! | ATAATGGTTGATGGATGGGC+AGG | + | chr5.4:68421035-68421054 | MS.gene39866:CDS | 45.0% |
| !! | GAGGAGCAAACTCTAAGGTA+AGG | - | chr5.4:68420094-68420113 | None:intergenic | 45.0% |
| !!! | TGCTTGCAGACTGGCTTTTT+AGG | + | chr5.4:68419149-68419168 | MS.gene39866:intron | 45.0% |
| ACTGGGAGAGCGATGAGTAA+TGG | - | chr5.4:68421825-68421844 | None:intergenic | 50.0% | |
| AGAGCCCCGTGACATATACT+GGG | + | chr5.4:68419711-68419730 | MS.gene39866:CDS | 50.0% | |
| ATCGAACCTGAGACCTTGAG+AGG | - | chr5.4:68420113-68420132 | None:intergenic | 50.0% | |
| CCCGAACTAATTGAACACGC+AGG | + | chr5.4:68416773-68416792 | MS.gene39866:CDS | 50.0% | |
| CGTGAAGAAGCAATGGATCC+TGG | + | chr5.4:68421140-68421159 | MS.gene39866:CDS | 50.0% | |
| CTTGAACAACCCATCTGGGT+TGG | + | chr5.4:68420047-68420066 | MS.gene39866:intron | 50.0% | |
| GCAATGGATCCTGGGACTAT+TGG | + | chr5.4:68421149-68421168 | MS.gene39866:CDS | 50.0% | |
| GCGCCTAGCAAACATAGTGA+TGG | + | chr5.4:68422284-68422303 | MS.gene39866:CDS | 50.0% | |
| GCTTCAAAGCAATCCCAGGA+AGG | - | chr5.4:68420635-68420654 | None:intergenic | 50.0% | |
| GTAACCTTGGCGCAACTGTA+AGG | + | chr5.4:68421374-68421393 | MS.gene39866:intron | 50.0% | |
| GTCACATTGTGCTTGCAGAC+TGG | + | chr5.4:68419140-68419159 | MS.gene39866:intron | 50.0% | |
| TCAAGAGTGGAAGGAAGAGC+CGG | + | chr5.4:68422220-68422239 | MS.gene39866:CDS | 50.0% | |
| TCCAAACAAAACGCCAGTCG+CGG | + | chr5.4:68422249-68422268 | MS.gene39866:CDS | 50.0% | |
| TTAAGGTCCAGTCCACTGCA+AGG | + | chr5.4:68416659-68416678 | MS.gene39866:CDS | 50.0% | |
| TTGGCGCAACTGTAAGGTCA+CGG | + | chr5.4:68421380-68421399 | MS.gene39866:intron | 50.0% | |
| TTTGCTCCTCTCAAGGTCTC+AGG | + | chr5.4:68420104-68420123 | MS.gene39866:intron | 50.0% | |
| ! | ATGGTGCCAGAGGGAAGAAA+GGG | - | chr5.4:68419107-68419126 | None:intergenic | 50.0% |
| ! | TCACTATGTTTGCTAGGCGC+AGG | - | chr5.4:68422284-68422303 | None:intergenic | 50.0% |
| ! | TCCCTGGTGCTAAGTTTGGT+GGG | + | chr5.4:68420135-68420154 | MS.gene39866:intron | 50.0% |
| ! | TGCTTGAAGAAGGAGCATGG+GGG | - | chr5.4:68418354-68418373 | None:intergenic | 50.0% |
| !! | AGCACCCCAACGAGTTTTGA+AGG | - | chr5.4:68419629-68419648 | None:intergenic | 50.0% |
| !! | ATGAGAGTGCTGGAGCATTC+TGG | + | chr5.4:68421706-68421725 | MS.gene39866:CDS | 50.0% |
| !! | TGGTCTCGTGGTGTTGACTT+GGG | + | chr5.4:68420067-68420086 | MS.gene39866:intron | 50.0% |
| !! | TTGGTCTCGTGGTGTTGACT+TGG | + | chr5.4:68420066-68420085 | MS.gene39866:intron | 50.0% |
| AAGGTCACGGGTTCAAGTCC+TGG | + | chr5.4:68421393-68421412 | MS.gene39866:intron | 55.0% | |
| ACAAAAGCCCCTCCTTGCAG+TGG | - | chr5.4:68416674-68416693 | None:intergenic | 55.0% | |
| ACCACGAGACCAACCCAGAT+GGG | - | chr5.4:68420059-68420078 | None:intergenic | 55.0% | |
| ACGCCGTCCTGACCAATTCA+CGG | + | chr5.4:68418218-68418237 | MS.gene39866:CDS | 55.0% | |
| AGCCCACCAAACTTAGCACC+AGG | - | chr5.4:68420140-68420159 | None:intergenic | 55.0% | |
| CAGAGCCCCGTGACATATAC+TGG | + | chr5.4:68419710-68419729 | MS.gene39866:CDS | 55.0% | |
| CAGTATATGTCACGGGGCTC+TGG | - | chr5.4:68419712-68419731 | None:intergenic | 55.0% | |
| GCATTCTGGCCTGATGTCCA+TGG | + | chr5.4:68421720-68421739 | MS.gene39866:CDS | 55.0% | |
| GCCCACCAAACTTAGCACCA+GGG | - | chr5.4:68420139-68420158 | None:intergenic | 55.0% | |
| GCCTGCTGCATTGCAAATGC+CGG | + | chr5.4:68416748-68416767 | MS.gene39866:CDS | 55.0% | |
| GTCTCAGGTTCGATTCTCCC+TGG | + | chr5.4:68420119-68420138 | MS.gene39866:intron | 55.0% | |
| GTGACCTTACAGTTGCGCCA+AGG | - | chr5.4:68421381-68421400 | None:intergenic | 55.0% | |
| TCCGGCATTTGCAATGCAGC+AGG | - | chr5.4:68416752-68416771 | None:intergenic | 55.0% | |
| TGGCGCAACTGTAAGGTCAC+GGG | + | chr5.4:68421381-68421400 | MS.gene39866:intron | 55.0% | |
| ! | CATGGTGCCAGAGGGAAGAA+AGG | - | chr5.4:68419108-68419127 | None:intergenic | 55.0% |
| ! | CTCCCTGGTGCTAAGTTTGG+TGG | + | chr5.4:68420134-68420153 | MS.gene39866:intron | 55.0% |
| !! | TCCGCGACTGGCGTTTTGTT+TGG | - | chr5.4:68422253-68422272 | None:intergenic | 55.0% |
| ACTGAAGCTCCCGCATACGC+AGG | - | chr5.4:68421490-68421509 | None:intergenic | 60.0% | |
| AGGTCCAGTCCACTGCAAGG+AGG | + | chr5.4:68416662-68416681 | MS.gene39866:CDS | 60.0% | |
| ATGCGGGAGCTTCAGTGCAC+CGG | + | chr5.4:68421494-68421513 | MS.gene39866:intron | 60.0% | |
| CACCACGAGACCAACCCAGA+TGG | - | chr5.4:68420060-68420079 | None:intergenic | 60.0% | |
| CAGGTGTGTTCTTCCGCGAC+TGG | - | chr5.4:68422265-68422284 | None:intergenic | 60.0% | |
| CTGAAGCTCCCGCATACGCA+GGG | - | chr5.4:68421489-68421508 | None:intergenic | 60.0% | |
| GATGGATGGGCAGGATGTGC+TGG | + | chr5.4:68421044-68421063 | MS.gene39866:CDS | 60.0% | |
| GGTCCAGTCCACTGCAAGGA+GGG | + | chr5.4:68416663-68416682 | MS.gene39866:CDS | 60.0% | |
| GTCCAGTCCACTGCAAGGAG+GGG | + | chr5.4:68416664-68416683 | MS.gene39866:CDS | 60.0% | |
| ! | CAAATGGTGGGACCCCTTCC+CGG | + | chr5.4:68421462-68421481 | MS.gene39866:intron | 60.0% |
| !! | ACCCATCTGGGTTGGTCTCG+TGG | + | chr5.4:68420055-68420074 | MS.gene39866:intron | 60.0% |
| AGCCCCTCCTTGCAGTGGAC+TGG | - | chr5.4:68416669-68416688 | None:intergenic | 65.0% | |
| CATACGCAGGGTCCGGGAAG+GGG | - | chr5.4:68421477-68421496 | None:intergenic | 65.0% | |
| CGGGAAGGGGTCCCACCATT+TGG | - | chr5.4:68421464-68421483 | None:intergenic | 65.0% | |
| CTTCCCGGACCCTGCGTATG+CGG | + | chr5.4:68421477-68421496 | MS.gene39866:intron | 65.0% | |
| GCATACGCAGGGTCCGGGAA+GGG | - | chr5.4:68421478-68421497 | None:intergenic | 65.0% | |
| TGCGGGAGCTTCAGTGCACC+GGG | + | chr5.4:68421495-68421514 | MS.gene39866:intron | 65.0% | |
| TTCCCGGACCCTGCGTATGC+GGG | + | chr5.4:68421478-68421497 | MS.gene39866:intron | 65.0% | |
| CGCATACGCAGGGTCCGGGA+AGG | - | chr5.4:68421479-68421498 | None:intergenic | 70.0% | |
| CTCCCGCATACGCAGGGTCC+GGG | - | chr5.4:68421483-68421502 | None:intergenic | 70.0% | |
| GCTCCCGCATACGCAGGGTC+CGG | - | chr5.4:68421484-68421503 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 68416521 | 68422346 | 68416521 | ID=MS.gene39866 |
| chr5.4 | mRNA | 68416521 | 68422346 | 68416521 | ID=MS.gene39866.t1;Parent=MS.gene39866 |
| chr5.4 | exon | 68416521 | 68416834 | 68416521 | ID=MS.gene39866.t1.exon1;Parent=MS.gene39866.t1 |
| chr5.4 | CDS | 68416521 | 68416834 | 68416521 | ID=cds.MS.gene39866.t1;Parent=MS.gene39866.t1 |
| chr5.4 | exon | 68417629 | 68417775 | 68417629 | ID=MS.gene39866.t1.exon2;Parent=MS.gene39866.t1 |
| chr5.4 | CDS | 68417629 | 68417775 | 68417629 | ID=cds.MS.gene39866.t1;Parent=MS.gene39866.t1 |
| chr5.4 | exon | 68418104 | 68418239 | 68418104 | ID=MS.gene39866.t1.exon3;Parent=MS.gene39866.t1 |
| chr5.4 | CDS | 68418104 | 68418239 | 68418104 | ID=cds.MS.gene39866.t1;Parent=MS.gene39866.t1 |
| chr5.4 | exon | 68418394 | 68418495 | 68418394 | ID=MS.gene39866.t1.exon4;Parent=MS.gene39866.t1 |
| chr5.4 | CDS | 68418394 | 68418495 | 68418394 | ID=cds.MS.gene39866.t1;Parent=MS.gene39866.t1 |
| chr5.4 | exon | 68418900 | 68419019 | 68418900 | ID=MS.gene39866.t1.exon5;Parent=MS.gene39866.t1 |
| chr5.4 | CDS | 68418900 | 68419019 | 68418900 | ID=cds.MS.gene39866.t1;Parent=MS.gene39866.t1 |
| chr5.4 | exon | 68419158 | 68419238 | 68419158 | ID=MS.gene39866.t1.exon6;Parent=MS.gene39866.t1 |
| chr5.4 | CDS | 68419158 | 68419238 | 68419158 | ID=cds.MS.gene39866.t1;Parent=MS.gene39866.t1 |
| chr5.4 | exon | 68419562 | 68419902 | 68419562 | ID=MS.gene39866.t1.exon7;Parent=MS.gene39866.t1 |
| chr5.4 | CDS | 68419562 | 68419902 | 68419562 | ID=cds.MS.gene39866.t1;Parent=MS.gene39866.t1 |
| chr5.4 | exon | 68420602 | 68420847 | 68420602 | ID=MS.gene39866.t1.exon8;Parent=MS.gene39866.t1 |
| chr5.4 | CDS | 68420602 | 68420847 | 68420602 | ID=cds.MS.gene39866.t1;Parent=MS.gene39866.t1 |
| chr5.4 | exon | 68420977 | 68421301 | 68420977 | ID=MS.gene39866.t1.exon9;Parent=MS.gene39866.t1 |
| chr5.4 | CDS | 68420977 | 68421301 | 68420977 | ID=cds.MS.gene39866.t1;Parent=MS.gene39866.t1 |
| chr5.4 | exon | 68421681 | 68421914 | 68421681 | ID=MS.gene39866.t1.exon10;Parent=MS.gene39866.t1 |
| chr5.4 | CDS | 68421681 | 68421914 | 68421681 | ID=cds.MS.gene39866.t1;Parent=MS.gene39866.t1 |
| chr5.4 | exon | 68422092 | 68422346 | 68422092 | ID=MS.gene39866.t1.exon11;Parent=MS.gene39866.t1 |
| chr5.4 | CDS | 68422092 | 68422346 | 68422092 | ID=cds.MS.gene39866.t1;Parent=MS.gene39866.t1 |
| Gene Sequence |
| Protein sequence |
