AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene028734

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene028734.t1 MTR_2g094020 94.743 837 44 0 1 837 1 837 0.0 1655
MS.gene028734.t1 MTR_2g094060 91.876 837 64 1 1 837 1 833 0.0 1590
MS.gene028734.t1 MTR_2g094060 91.553 805 64 1 1 805 1 801 0.0 1520
MS.gene028734.t1 MTR_4g059680 77.857 840 180 3 1 836 1 838 0.0 1364
MS.gene028734.t1 MTR_2g094060 91.594 690 54 1 1 690 1 686 0.0 1302
MS.gene028734.t1 MTR_5g021190 54.366 859 349 16 1 837 1 838 0.0 933
MS.gene028734.t1 MTR_8g016230 53.693 853 359 12 3 836 2 837 0.0 932
MS.gene028734.t1 MTR_2g100110 54.447 832 351 10 18 836 24 840 0.0 914
MS.gene028734.t1 MTR_8g085210 52.540 866 357 14 12 836 44 896 0.0 893
MS.gene028734.t1 MTR_1g018200 59.497 716 267 8 18 723 27 729 0.0 869
MS.gene028734.t1 MTR_2g039120 56.552 725 293 7 8 723 14 725 0.0 853
MS.gene028734.t1 MTR_2g042610 52.284 832 352 14 22 837 27 829 0.0 844
MS.gene028734.t1 MTR_1g023120 56.104 729 275 9 19 727 27 730 0.0 841
MS.gene028734.t1 MTR_3g112370 53.254 753 308 10 1 730 1 732 0.0 822
MS.gene028734.t1 MTR_3g096900 57.865 712 285 7 20 721 25 731 0.0 815
MS.gene028734.t1 MTR_2g039120 56.522 690 278 7 8 688 14 690 0.0 811
MS.gene028734.t1 MTR_5g025830 49.882 846 351 20 22 836 28 831 0.0 795
MS.gene028734.t1 MTR_1g023120 55.780 692 262 8 52 723 1 668 0.0 790
MS.gene028734.t1 MTR_5g024080 48.345 846 375 18 13 836 1 806 0.0 783
MS.gene028734.t1 MTR_3g096900 57.437 679 274 7 20 688 25 698 0.0 765
MS.gene028734.t1 MTR_3g005570 46.290 849 401 11 1 837 5 810 0.0 754
MS.gene028734.t1 MTR_4g073290 44.653 851 414 16 9 837 10 825 0.0 727
MS.gene028734.t1 MTR_2g039120 56.109 622 253 5 8 620 14 624 0.0 722
MS.gene028734.t1 MTR_3g117840 43.478 851 424 15 9 837 12 827 0.0 717
MS.gene028734.t1 MTR_2g100110 57.712 577 224 5 18 586 24 588 0.0 699
MS.gene028734.t1 MTR_2g039120 56.752 585 236 4 8 586 14 587 0.0 695
MS.gene028734.t1 MTR_3g096900 57.990 607 241 6 20 617 25 626 0.0 689
MS.gene028734.t1 MTR_3g096910 50.211 711 307 13 22 722 27 700 0.0 684
MS.gene028734.t1 MTR_3g088520 47.462 729 332 12 8 727 8 694 0.0 658
MS.gene028734.t1 MTR_3g088520 46.990 681 314 11 52 727 1 639 0.0 610
MS.gene028734.t1 MTR_3g096910 46.167 587 269 13 146 722 1 550 1.68e-165 492
MS.gene028734.t1 MTR_5g022590 40.798 326 154 7 41 364 11 299 3.61e-75 251
MS.gene028734.t1 MTR_5g022590 35.537 121 63 3 690 801 304 418 2.51e-15 79.7
MS.gene028734.t1 MTR_4g126330 36.058 416 158 10 277 688 131 442 7.94e-66 227
MS.gene028734.t1 MTR_4g126330 68.478 92 29 0 77 168 25 116 2.11e-37 146
MS.gene028734.t1 MTR_3g005610 35.816 282 146 7 438 712 27 280 1.08e-40 152
MS.gene028734.t1 MTR_2g059440 33.684 285 147 8 438 712 27 279 2.35e-34 134
MS.gene028734.t1 MTR_2g100000 30.595 353 204 9 32 353 64 406 5.13e-30 127
MS.gene028734.t1 MTR_2g059430 29.924 264 117 5 454 712 11 211 2.87e-23 100
MS.gene028734.t1 MTR_2g100000 28.520 277 157 9 108 353 2 268 3.56e-13 73.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene028734.t1 AT2G28470 72.518 826 214 6 21 837 31 852 0.0 1242
MS.gene028734.t1 AT2G28470 72.518 826 214 6 21 837 25 846 0.0 1242
MS.gene028734.t1 AT2G28470 72.518 826 214 6 21 837 31 852 0.0 1242
MS.gene028734.t1 AT2G28470 72.518 826 214 6 21 837 25 846 0.0 1242
MS.gene028734.t1 AT2G28470 74.336 678 164 4 19 690 29 702 0.0 1051
MS.gene028734.t1 AT4G36360 54.186 860 337 15 9 837 13 846 0.0 941
MS.gene028734.t1 AT4G36360 54.186 860 336 16 9 837 13 845 0.0 936
MS.gene028734.t1 AT2G32810 52.229 875 369 13 2 837 13 877 0.0 922
MS.gene028734.t1 AT3G13750 54.181 849 359 11 3 837 15 847 0.0 921
MS.gene028734.t1 AT2G32810 52.262 840 353 12 2 803 13 842 0.0 891
MS.gene028734.t1 AT5G20710 50.467 856 372 17 1 836 3 826 0.0 845
MS.gene028734.t1 AT4G26140 55.404 731 298 8 12 726 10 728 0.0 833
MS.gene028734.t1 AT3G52840 55.951 731 298 9 6 726 65 781 0.0 830
MS.gene028734.t1 AT3G52840 55.951 731 298 9 6 726 11 727 0.0 830
MS.gene028734.t1 AT1G45130 54.172 755 292 12 1 725 1 731 0.0 829
MS.gene028734.t1 AT4G26140 53.836 756 296 10 12 726 10 753 0.0 819
MS.gene028734.t1 AT5G56870 55.153 718 299 7 14 723 21 723 0.0 815
MS.gene028734.t1 AT5G63810 53.388 738 323 9 3 728 13 741 0.0 807
MS.gene028734.t1 AT1G31740 48.179 851 354 15 1 836 1 779 0.0 788
MS.gene028734.t1 AT4G26140 54.178 718 276 10 12 688 10 715 0.0 782
MS.gene028734.t1 AT1G77410 46.471 850 404 14 1 837 4 815 0.0 746
MS.gene028734.t1 AT1G77410 46.199 855 404 15 1 837 4 820 0.0 740
MS.gene028734.t1 AT1G45130 53.963 656 273 9 83 725 13 652 0.0 723
MS.gene028734.t1 AT4G26140 56.070 626 245 7 12 620 10 622 0.0 721
MS.gene028734.t1 AT4G26140 56.070 626 245 7 12 620 10 622 0.0 721
MS.gene028734.t1 AT4G26140 56.320 625 247 6 12 620 10 624 0.0 718
MS.gene028734.t1 AT2G16730 42.243 838 424 16 22 837 44 843 0.0 679
MS.gene028734.t1 AT5G63800 48.446 708 323 11 22 722 32 704 0.0 678
MS.gene028734.t1 AT4G35010 41.507 836 433 16 22 837 41 840 0.0 669
MS.gene028734.t1 AT4G26140 58.684 547 205 4 12 545 10 548 0.0 662
MS.gene028734.t1 AT4G26140 56.469 572 203 6 12 545 10 573 0.0 649
MS.gene028734.t1 AT4G26140 56.469 572 203 6 12 545 10 573 0.0 649
MS.gene028734.t1 AT4G38590 41.521 802 417 15 52 836 1 767 0.0 639
MS.gene028734.t1 AT4G38590 41.147 802 424 15 48 836 65 831 0.0 631
MS.gene028734.t1 AT1G77410 44.993 729 350 14 122 837 19 709 0.0 593
MS.gene028734.t1 AT1G77410 44.993 729 350 14 122 837 19 709 0.0 593
MS.gene028734.t1 AT5G20710 46.708 653 300 16 200 836 1 621 0.0 573
MS.gene028734.t1 AT2G04060 36.631 374 152 8 287 655 23 316 1.62e-57 204
MS.gene028734.t1 AT2G04062 42.286 175 80 2 20 194 5 158 7.99e-40 144
MS.gene028734.t1 AT1G72990 34.639 332 176 11 32 332 18 339 2.03e-38 152
MS.gene028734.t1 AT1G72990 34.639 332 176 11 32 332 73 394 3.26e-38 152
MS.gene028734.t1 AT1G72990 34.639 332 176 11 32 332 73 394 3.26e-38 152
MS.gene028734.t1 AT1G72990 33.645 321 172 11 43 332 22 332 2.77e-33 137
MS.gene028734.t1 AT3G53080 43.529 85 46 2 753 836 69 152 9.42e-17 78.6
MS.gene028734.t1 AT3G53075 41.667 84 46 3 754 836 81 162 1.95e-12 66.6
MS.gene028734.t1 AT3G53075 41.667 84 46 3 754 836 111 192 2.70e-12 67.0

Find 210 sgRNAs with CRISPR-Local

Find 380 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTTCTTCACAAAGCTTTA+TGG 0.109681 2.1:+9077225 None:intergenic
AAACGTAGGGTCTTGATTTC+TGG 0.165476 2.1:-9079339 MS.gene028734:CDS
AACTGACAATGAACCATTTA+AGG 0.172483 2.1:-9078532 MS.gene028734:intron
TTGACAGTGGTTTCCCTCTT+TGG 0.180260 2.1:-9078584 MS.gene028734:intron
CAAATCAACGGTTGGTTCTT+AGG 0.201157 2.1:+9075475 None:intergenic
TGACATTTGGTTTGAGTAAA+AGG 0.209652 2.1:+9075166 None:intergenic
GAAGGTTACCTTACCTTAAA+TGG 0.218483 2.1:+9078519 None:intergenic
GCCCTTCATGCCTTCGTAAA+TGG 0.225686 2.1:-9076220 MS.gene028734:CDS
CTTTGGCTTCACTTCATTCC+AGG 0.251644 2.1:-9078567 MS.gene028734:CDS
AAAGGTGAGGCTTGGGTAAA+TGG 0.261772 2.1:-9075265 MS.gene028734:CDS
TTGATACAGGTCGGCCTAAA+AGG 0.267162 2.1:-9075556 MS.gene028734:intron
CTTGTATTGTTTGAGGAAAA+TGG 0.275914 2.1:-9074979 MS.gene028734:CDS
AACTTACATGAACCTGTTAA+AGG 0.282398 2.1:-9079131 MS.gene028734:CDS
CACAATTGTAGTGGCTTTCA+TGG 0.286541 2.1:+9079440 None:intergenic
GAGTTTAACAGTTGGACTTC+AGG 0.290254 2.1:-9075876 MS.gene028734:intron
CTTAGGTTTGTCTTTGTTCC+CGG 0.301351 2.1:+9075955 None:intergenic
TAGAAACTTCAAGTTCAAAA+TGG 0.304366 2.1:-9076507 MS.gene028734:CDS
CTGGTAAATCATACATCAAT+TGG 0.305487 2.1:-9078193 MS.gene028734:CDS
CATCTTTAGATTTCTGAATA+AGG 0.312398 2.1:+9079189 None:intergenic
TACATTTCAAAATTACTATA+TGG 0.316656 2.1:-9077688 MS.gene028734:intron
TTCGTAAATGGCAAGCTTGC+AGG 0.316804 2.1:-9076208 MS.gene028734:intron
CGGACGCTGCAGCAGCAATA+AGG 0.321735 2.1:-9074728 MS.gene028734:CDS
TATATGCTGCAGGAATTATT+AGG 0.322005 2.1:-9077285 MS.gene028734:intron
CTCTTGATACAGGTGTTCCT+TGG 0.323700 2.1:-9078151 MS.gene028734:CDS
ACTACTTGTGGTACTCATTA+AGG 0.331342 2.1:-9076390 MS.gene028734:intron
CTAAGAACCAACCGTTGATT+TGG 0.333687 2.1:-9075474 MS.gene028734:CDS
GACAAAGCATTGGGCGATAC+TGG 0.337595 2.1:-9075243 MS.gene028734:CDS
AAGAGAACCTGGCCTTTAAC+AGG 0.337674 2.1:+9079119 None:intergenic
AAAACCTGAGATAAAATTAT+AGG 0.339759 2.1:+9078357 None:intergenic
GACATACCATACTCATCAAT+TGG 0.345727 2.1:+9077470 None:intergenic
GCTTCAACAGCTAAACTCTT+TGG 0.347957 2.1:+9074129 None:intergenic
AGCGGTGAATCGCTTCATTT+CGG 0.355773 2.1:+9078431 None:intergenic
AATACAAGAGTGTTGCCTTT+TGG 0.358808 2.1:+9074994 None:intergenic
AAATCAACGGTTGGTTCTTA+GGG 0.361145 2.1:+9075476 None:intergenic
TCCATAGCTTGCAAATTTGA+TGG 0.361451 2.1:+9074783 None:intergenic
TTCAAAATGGAGTTGGATAA+AGG 0.363931 2.1:-9076494 MS.gene028734:CDS
GAGATTACCTGATTATGATT+AGG 0.371095 2.1:+9074808 None:intergenic
TCCACAATTCATGTGACATT+TGG 0.376285 2.1:+9075153 None:intergenic
GATGCCCCAATTGATGAGTA+TGG 0.385338 2.1:-9077476 MS.gene028734:intron
GGAGTATCAACTAATACATT+TGG 0.387632 2.1:-9074171 MS.gene028734:CDS
CAACACTCTTGTATTGTTTG+AGG 0.391736 2.1:-9074986 MS.gene028734:CDS
TCATATGCACATCAGAACTA+TGG 0.396147 2.1:-9075761 MS.gene028734:intron
GGCCTAAAAGGTGAAGATTT+AGG 0.396713 2.1:-9075544 MS.gene028734:CDS
TCCATCAAATTTGCAAGCTA+TGG 0.398311 2.1:-9074784 MS.gene028734:CDS
TGCCAGATTGAAAATGAGTA+TGG 0.398646 2.1:-9078242 MS.gene028734:intron
TGGAACCAAGATACAGAATC+AGG 0.402684 2.1:-9074865 MS.gene028734:CDS
AGCACTACATTCTTGCAATC+TGG 0.405989 2.1:+9076811 None:intergenic
GAATTCTTAGGGAGTCAAAC+CGG 0.407325 2.1:-9075974 MS.gene028734:intron
TCTTGATACAGGTGTTCCTT+GGG 0.408696 2.1:-9078150 MS.gene028734:CDS
ATCCCGATCACAGTACTTTC+TGG 0.412854 2.1:-9075920 MS.gene028734:CDS
TTCAAACCTTTCAATATCAC+TGG 0.417812 2.1:+9075701 None:intergenic
CAAGTGTCCTAATCATAATC+AGG 0.421130 2.1:-9074815 MS.gene028734:CDS
CCCGTGAAGTCAATCGCAAC+TGG 0.421516 2.1:+9075295 None:intergenic
GGTCTCTCTAGTGGAAATTC+CGG 0.429067 2.1:-9075523 MS.gene028734:CDS
GTCCATATGTTTGTGCTGAA+TGG 0.430727 2.1:-9078682 MS.gene028734:CDS
CAATTGTGTTGGTCATGCTT+TGG 0.433167 2.1:-9079425 MS.gene028734:CDS
AGTCAATCGCAACTGGATTA+CGG 0.438682 2.1:+9075302 None:intergenic
TGCGATTGACTTCACGGGGA+TGG 0.439820 2.1:-9075290 MS.gene028734:CDS
TCCAGTTGCGATTGACTTCA+CGG 0.439836 2.1:-9075296 MS.gene028734:CDS
ACCACCTATACCTCTAGGTT+TGG 0.439893 2.1:+9077166 None:intergenic
TGGTTCCACGAGTCTATTTG+AGG 0.441184 2.1:+9074880 None:intergenic
TTAGATTTCTGAATAAGGTC+TGG 0.443250 2.1:+9079194 None:intergenic
AGTGTCCACGTTGGCGAGAA+AGG 0.447360 2.1:+9076903 None:intergenic
ACATACCATACTCATCAATT+GGG 0.447562 2.1:+9077471 None:intergenic
TTCCATTCAGCACAAACATA+TGG 0.448715 2.1:+9078680 None:intergenic
TGGACCAAGAGAAGTAATCT+TGG 0.450309 2.1:+9077186 None:intergenic
GCGATTGACTTCACGGGGAT+GGG 0.451344 2.1:-9075289 MS.gene028734:CDS
CATAGAGCATTGGTCATTGA+TGG 0.455109 2.1:-9079363 MS.gene028734:CDS
CTTCAAGTTCAAAATGGAGT+TGG 0.456846 2.1:-9076501 MS.gene028734:CDS
CTCTTTGGCACTCCTCTACA+AGG 0.457641 2.1:+9074144 None:intergenic
ACATGGGGAGCGGGGATCAC+CGG 0.459873 2.1:-9075725 MS.gene028734:CDS
TAAATGGTTCATTGTCAGTT+CGG 0.461736 2.1:+9078535 None:intergenic
GATGGGAAAAGGTGAGGCTT+GGG 0.463029 2.1:-9075272 MS.gene028734:CDS
GGACCAAGAGAAGTAATCTT+GGG 0.464627 2.1:+9077187 None:intergenic
ATCGCAGTAAAATCCATTGC+AGG 0.465312 2.1:+9077946 None:intergenic
TTTGGCTTCACTTCATTCCA+GGG 0.468859 2.1:-9078566 MS.gene028734:CDS
CCAACCGTTGATTTGGTACA+AGG 0.469575 2.1:-9075467 MS.gene028734:intron
TTCCAGAAAGTACTGTGATC+GGG 0.469716 2.1:+9075918 None:intergenic
TCTTATTAACAGGCCTGCAT+TGG 0.471406 2.1:-9074213 MS.gene028734:intron
GACTTCACGGGGATGGGAAA+AGG 0.474886 2.1:-9075283 MS.gene028734:CDS
GAACCCAAGATTACTTCTCT+TGG 0.475327 2.1:-9077190 MS.gene028734:CDS
ATGGCTACATCTCTTGATAC+AGG 0.477673 2.1:-9078161 MS.gene028734:CDS
GGACACTTGAGCAACAGTTC+AGG 0.480750 2.1:+9074829 None:intergenic
GGAGACATCGATTCAGCCTA+TGG 0.480983 2.1:-9078221 MS.gene028734:CDS
ACCAACTTTGACCGAAGTAC+TGG 0.484159 2.1:-9077530 MS.gene028734:CDS
GTAGCAAAAGATATTTGTGT+TGG 0.485090 2.1:+9074949 None:intergenic
GGATCAAGAAGTTGTAGTAT+TGG 0.487346 2.1:-9074192 MS.gene028734:CDS
GCAAGCTATGGAACACCACT+AGG 0.487876 2.1:-9074772 MS.gene028734:CDS
GGGATGTCCACATTAAGCTT+AGG 0.489061 2.1:+9075938 None:intergenic
ATATTGAAAGGTTTGAAGAA+TGG 0.489802 2.1:-9075695 MS.gene028734:CDS
TCATAACTTGTAGCAATGAA+TGG 0.491869 2.1:+9077503 None:intergenic
TGGGTAAATGGACAAAGCAT+TGG 0.493909 2.1:-9075253 MS.gene028734:CDS
ATGAAACTTACGATTGGATC+AGG 0.495286 2.1:+9078104 None:intergenic
CTATATGTGCATCTCCGTAT+TGG 0.495851 2.1:-9078704 MS.gene028734:CDS
GGATGGGAAAAGGTGAGGCT+TGG 0.496077 2.1:-9075273 MS.gene028734:CDS
TTGATCTCTCCACTCGGAAG+TGG 0.496974 2.1:-9075661 MS.gene028734:CDS
TTTCCAGAAAGTACTGTGAT+CGG 0.499351 2.1:+9075917 None:intergenic
ACAAACTTTGATGCTCCATC+CGG 0.502467 2.1:-9075325 MS.gene028734:CDS
ATTCATATCACTTGCCTGCA+TGG 0.503989 2.1:-9076849 MS.gene028734:CDS
GGGTAAATGGACAAAGCATT+GGG 0.505117 2.1:-9075252 MS.gene028734:CDS
GGCGCTGTCAATTGTAAAGA+AGG 0.510761 2.1:-9074707 MS.gene028734:intron
TTTGAAATGTACCGCCTCGT+TGG 0.514090 2.1:+9077700 None:intergenic
TGGTAAATCATACATCAATT+GGG 0.516725 2.1:-9078192 MS.gene028734:CDS
GTGAAAGCAGTGGCTGAGGC+AGG 0.519491 2.1:-9078728 MS.gene028734:CDS
ATGTAAGTTCCAGAAAACAT+AGG 0.522734 2.1:+9079145 None:intergenic
TTCCTTCACATTGAATCGCT+CGG 0.524122 2.1:-9076247 MS.gene028734:CDS
GATTCAGCCTATGGTTCTGC+TGG 0.524874 2.1:-9078212 MS.gene028734:CDS
TATTGCTGCTGCAGCGTCCG+CGG 0.525719 2.1:+9074731 None:intergenic
CTTATTCAGAAATCTAAAGA+TGG 0.530946 2.1:-9079188 MS.gene028734:CDS
TCAGTTCGGAACTTAATCCC+TGG 0.533302 2.1:+9078549 None:intergenic
CATGAGATCGACAATCTTAG+CGG 0.533942 2.1:+9078413 None:intergenic
GTTGCATGAGTCTGTGCAAT+CGG 0.533957 2.1:+9075198 None:intergenic
ACCAAATGTCACATGAATTG+TGG 0.534217 2.1:-9075154 MS.gene028734:CDS
GCCAGTACTTCGGTCAAAGT+TGG 0.534915 2.1:+9077529 None:intergenic
CCAGTTGCGATTGACTTCAC+GGG 0.536094 2.1:-9075295 MS.gene028734:CDS
TGAAGGAAAGTTTGAGAACC+AGG 0.536449 2.1:+9076262 None:intergenic
ACATGAACCTGTTAAAGGCC+AGG 0.536626 2.1:-9079126 MS.gene028734:intron
TGCCATTTACGAAGGCATGA+AGG 0.540037 2.1:+9076218 None:intergenic
GCATTTGAAGCAACATATGT+AGG 0.542208 2.1:+9075220 None:intergenic
CAGGCGGCAATTTATAAGAC+AGG 0.542741 2.1:-9076940 MS.gene028734:CDS
CCTTGTACCAAATCAACGGT+TGG 0.544937 2.1:+9075467 None:intergenic
GTTGATCTTAAGGATGATCC+TGG 0.545273 2.1:-9076280 MS.gene028734:CDS
TTCCACGAGTCTATTTGAGG+TGG 0.549895 2.1:+9074883 None:intergenic
GCCATTTACGAAGGCATGAA+GGG 0.550994 2.1:+9076219 None:intergenic
CTAGTGGAAATTCCGGAGGA+TGG 0.556179 2.1:-9075516 MS.gene028734:CDS
ACCTTTCAATATCACTGGAC+CGG 0.556352 2.1:+9075706 None:intergenic
TGATTTACCAGCAGAACCAT+AGG 0.557167 2.1:+9078205 None:intergenic
GTTTGTGCTGAATGGAACTA+CGG 0.558163 2.1:-9078674 MS.gene028734:CDS
ACCGGTCCAGTGATATTGAA+AGG 0.558381 2.1:-9075707 MS.gene028734:CDS
GGTCAAAGTTGGTTCCTCCA+TGG 0.559035 2.1:+9077540 None:intergenic
CACTCGGAAGTGGACATACC+AGG 0.560074 2.1:-9075651 MS.gene028734:intron
ATGAAGATTAATACCTGCAA+TGG 0.560132 2.1:-9077959 MS.gene028734:intron
CTACCCTCGTAGTACTCCAC+AGG 0.568332 2.1:-9079307 MS.gene028734:intron
AGACTGTGAATTCCATCCTC+CGG 0.568524 2.1:+9075504 None:intergenic
GATAAAACTGTAAATTTCAG+AGG 0.569411 2.1:-9076874 MS.gene028734:CDS
CACAAACATATGGACCAATA+CGG 0.573068 2.1:+9078690 None:intergenic
TGAATGGTCCGCCAGTACTT+CGG 0.575468 2.1:+9077519 None:intergenic
GCGTGCGGAAACTTCTACCG+CGG 0.576446 2.1:-9074748 MS.gene028734:CDS
TCCACGAGTCTATTTGAGGT+GGG 0.576939 2.1:+9074884 None:intergenic
TGTAGTGCTTAATACTGCAA+AGG 0.584106 2.1:-9076797 MS.gene028734:intron
AAGTTTCCGCACGCCCCTAG+TGG 0.584376 2.1:+9074757 None:intergenic
TTACGAAGGCATGAAGGGCA+TGG 0.587650 2.1:+9076224 None:intergenic
CAAGCTATGGAACACCACTA+GGG 0.587982 2.1:-9074771 MS.gene028734:CDS
GGAACCTGTGGGTATTTCGA+AGG 0.589135 2.1:-9076473 MS.gene028734:CDS
ATTACCTTGTACCAAATCAA+CGG 0.590007 2.1:+9075463 None:intergenic
AATTCTTAGGGAGTCAAACC+GGG 0.592065 2.1:-9075973 MS.gene028734:intron
ACAACTTCTTGATCCAATGC+AGG 0.595751 2.1:+9074200 None:intergenic
GGCCGAGCGATTCAATGTGA+AGG 0.596679 2.1:+9076245 None:intergenic
AATCGCAACTGGATTACGGC+CGG 0.599279 2.1:+9075306 None:intergenic
GGATTATGATCATAGAGCAT+TGG 0.599952 2.1:-9079373 MS.gene028734:CDS
GGAACCAAGATACAGAATCA+GGG 0.601704 2.1:-9074864 MS.gene028734:CDS
GGTCATTGATGGTAAACGTA+GGG 0.603222 2.1:-9079352 MS.gene028734:CDS
TCTTTAAGATGACTCCACTT+CGG 0.604348 2.1:+9077259 None:intergenic
GAATTATTAGGCAGCCGAAG+TGG 0.606606 2.1:-9077273 MS.gene028734:CDS
GATCTGCTGAGTTTAACAGT+TGG 0.607244 2.1:-9075884 MS.gene028734:CDS
ATTTGTGAAAGCAGTGGCTG+AGG 0.607383 2.1:-9078732 MS.gene028734:CDS
CACGGGGATGGGAAAAGGTG+AGG 0.608159 2.1:-9075278 MS.gene028734:CDS
AACACTTACAATGTCTGTGA+TGG 0.608501 2.1:+9075127 None:intergenic
ACCCACCTCAAATAGACTCG+TGG 0.609714 2.1:-9074885 MS.gene028734:CDS
ATTCAGAAATCTAAAGATGG+AGG 0.610249 2.1:-9079185 MS.gene028734:CDS
GCAACTGGATTACGGCCGGA+TGG 0.610380 2.1:+9075310 None:intergenic
CTCTCTAGTGGAAATTCCGG+AGG 0.610446 2.1:-9075520 MS.gene028734:CDS
GAAGATTTAGGTCTCTCTAG+TGG 0.612338 2.1:-9075532 MS.gene028734:CDS
TGCAAGCTTGCCATTTACGA+AGG 0.615073 2.1:+9076210 None:intergenic
GGAATGAAGTGAAGCCAAAG+AGG 0.616620 2.1:+9078570 None:intergenic
GAAAGCCACTACAATTGTGT+TGG 0.616676 2.1:-9079436 MS.gene028734:CDS
ACATTGGTGCATAACATCGT+TGG 0.619883 2.1:+9079396 None:intergenic
GAGTTGGATAAAGGAACCTG+TGG 0.624652 2.1:-9076485 MS.gene028734:CDS
CTGATAGAAGTGACTACTTG+TGG 0.624763 2.1:-9076402 MS.gene028734:CDS
GAATGAAGTGAAGCCAAAGA+GGG 0.625466 2.1:+9078571 None:intergenic
AGACAAACCTAAGCTTAATG+TGG 0.625480 2.1:-9075945 MS.gene028734:CDS
ACATTTGGAGACCCTTGTAG+AGG 0.626049 2.1:-9074156 MS.gene028734:CDS
GGAACACCACTAGGGGCGTG+CGG 0.627397 2.1:-9074763 MS.gene028734:CDS
TTCTCTTGGTCCAAACCTAG+AGG 0.630553 2.1:-9077176 MS.gene028734:intron
AACTTTGACCGAAGTACTGG+CGG 0.630915 2.1:-9077527 MS.gene028734:CDS
CTCACAGATACCACGTGCCA+CGG 0.632475 2.1:-9075029 MS.gene028734:intron
CATGACCAACACAATTGTAG+TGG 0.637336 2.1:+9079431 None:intergenic
CAGTTGCGATTGACTTCACG+GGG 0.639490 2.1:-9075294 MS.gene028734:CDS
GGACTGAAAATTGGAGTGCA+TGG 0.640312 2.1:-9077886 MS.gene028734:intron
AACGATGTTATGCACCAATG+TGG 0.642318 2.1:-9079394 MS.gene028734:CDS
TGGTCATTGATGGTAAACGT+AGG 0.643774 2.1:-9079353 MS.gene028734:CDS
TTTGTGCTGAATGGAACTAC+GGG 0.645930 2.1:-9078673 MS.gene028734:intron
AAGATGCTCACAGACCATGC+AGG 0.646255 2.1:+9076835 None:intergenic
TCATCCTTCGAAATACCCAC+AGG 0.647345 2.1:+9076469 None:intergenic
TCTTGCTGACACATGACCCA+AGG 0.647657 2.1:+9078134 None:intergenic
TGGTGCATAACATCGTTGGT+AGG 0.650577 2.1:+9079400 None:intergenic
ATCAGATTTAGTGTCCACGT+TGG 0.651157 2.1:+9076894 None:intergenic
TGCTGCCTTTCTCGCCAACG+TGG 0.653156 2.1:-9076908 MS.gene028734:CDS
ACACTCTTGATCTCTCCACT+CGG 0.653832 2.1:-9075667 MS.gene028734:CDS
TCTATGATCATAATCCACAT+TGG 0.654567 2.1:+9079380 None:intergenic
GAGAAACTGTATGCACCACA+AGG 0.656950 2.1:-9078384 MS.gene028734:CDS
TGGATTTCCTCACAGACCTG+TGG 0.658765 2.1:-9077754 MS.gene028734:CDS
GCAAATGCGAGATCTTCCAC+AGG 0.659001 2.1:+9077738 None:intergenic
GAACCAAGATACAGAATCAG+GGG 0.661311 2.1:-9074863 MS.gene028734:CDS
GGTGAAATTTGTGAAAGCAG+TGG 0.671103 2.1:-9078738 MS.gene028734:CDS
CAAGTAGTCACTTCTATCAG+CGG 0.678440 2.1:+9076405 None:intergenic
AAAATTATAGGTCCTCCTTG+TGG 0.680488 2.1:+9078369 None:intergenic
CATACCATACTCATCAATTG+GGG 0.683256 2.1:+9077472 None:intergenic
AAGCTATGGAACACCACTAG+GGG 0.683696 2.1:-9074770 MS.gene028734:CDS
AGATCTTCCACAGGTCTGTG+AGG 0.697656 2.1:+9077747 None:intergenic
CTGGTATGTCCACTTCCGAG+TGG 0.700367 2.1:+9075652 None:intergenic
GTATTGTTTGAGGAAAATGG+CGG 0.705148 2.1:-9074976 MS.gene028734:CDS
TCATCTTAAAGATTTGCACA+AGG 0.710585 2.1:-9077248 MS.gene028734:CDS
AGTTGGATAAAGGAACCTGT+GGG 0.713312 2.1:-9076484 MS.gene028734:CDS
ACAGACTCATGCAACTACAG+AGG 0.715275 2.1:-9075190 MS.gene028734:CDS
AACCAAGATACAGAATCAGG+GGG 0.718470 2.1:-9074862 MS.gene028734:CDS
TCTTTGGCACTCCTCTACAA+GGG 0.721168 2.1:+9074145 None:intergenic
AAACCTGTGGAGTACTACGA+GGG 0.734720 2.1:+9079304 None:intergenic
AAAACCTGTGGAGTACTACG+AGG 0.746145 2.1:+9079303 None:intergenic
AAACTGTATGCACCACAAGG+AGG 0.755949 2.1:-9078381 MS.gene028734:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TTAAATTATTTATATAAAAA+AGG + chr2.1:9075709-9075728 None:intergenic 0.0%
!! AATATGATAATATTACTTCA+CGG - chr2.1:9075925-9075944 MS.gene028734:CDS 15.0%
!! ATATTATTGATGAATTCTTA+GGG - chr2.1:9077569-9077588 MS.gene028734:intron 15.0%
!! TACATTTCAAAATTACTATA+TGG - chr2.1:9075866-9075885 MS.gene028734:intron 15.0%
!! TATATGAAGAATAGAAATTA+CGG - chr2.1:9076218-9076237 MS.gene028734:CDS 15.0%
!!! AATTTATGTGTATATTTTTC+TGG - chr2.1:9074915-9074934 MS.gene028734:CDS 15.0%
!!! ATATATTTTTCCAGATATTA+AGG - chr2.1:9075245-9075264 MS.gene028734:CDS 15.0%
!!! ATTTATGTGTATATTTTTCT+GGG - chr2.1:9074916-9074935 MS.gene028734:CDS 15.0%
!!! GTTTATATTGAAATTTTTGT+CGG - chr2.1:9076409-9076428 MS.gene028734:CDS 15.0%
!!! TTTATTGTTTTTTATAGATG+TGG - chr2.1:9074337-9074356 MS.gene028734:intron 15.0%
!! AAAACCTGAGATAAAATTAT+AGG + chr2.1:9075200-9075219 None:intergenic 20.0%
!! AAATTCCATAACTTATATCA+AGG + chr2.1:9078139-9078158 None:intergenic 20.0%
!! AAGCAACTTAATATAAATGA+AGG + chr2.1:9076792-9076811 None:intergenic 20.0%
!! AATTCCATAACTTATATCAA+GGG + chr2.1:9078138-9078157 None:intergenic 20.0%
!! ACTAAAATCATCTTATTAAC+AGG - chr2.1:9079331-9079350 MS.gene028734:CDS 20.0%
!! ATATGTTTCATTATCTATCT+TGG + chr2.1:9074637-9074656 None:intergenic 20.0%
!! GATATTATTGATGAATTCTT+AGG - chr2.1:9077568-9077587 MS.gene028734:intron 20.0%
!! TAATGAAGATACATTGTTAA+TGG - chr2.1:9077964-9077983 MS.gene028734:intron 20.0%
!!! AAAAAACATTTTTCATACAG+CGG + chr2.1:9078177-9078196 None:intergenic 20.0%
!!! AATTATTCACTAGGATTTTA+TGG - chr2.1:9077370-9077389 MS.gene028734:intron 20.0%
!!! CAATAGATTATGAACATTTT+TGG + chr2.1:9077507-9077526 None:intergenic 20.0%
!!! GATGATATATTTTCAAAAAC+TGG - chr2.1:9077103-9077122 MS.gene028734:intron 20.0%
!!! GTTAATTGTTTTTTGGTTTA+TGG - chr2.1:9075489-9075508 MS.gene028734:CDS 20.0%
!!! TAATTTGTTTTGTTTCACTT+TGG - chr2.1:9078897-9078916 MS.gene028734:intron 20.0%
!!! TTTATGTGTATATTTTTCTG+GGG - chr2.1:9074917-9074936 MS.gene028734:CDS 20.0%
!!! TTTTGTAACTAAAATTCATC+TGG - chr2.1:9076470-9076489 MS.gene028734:CDS 20.0%
! AAAAAAACAAGATTTGATCG+TGG + chr2.1:9079090-9079109 None:intergenic 25.0%
! AACAATAGATTTCAGTATGA+AGG + chr2.1:9076116-9076135 None:intergenic 25.0%
! AATATCAGTTTATCCAAACA+TGG - chr2.1:9074703-9074722 MS.gene028734:intron 25.0%
! ATAGTAATGAGAGAAATCAT+TGG + chr2.1:9077756-9077775 None:intergenic 25.0%
! ATATTACTTCACGGAAAAAT+TGG - chr2.1:9075934-9075953 MS.gene028734:CDS 25.0%
! ATATTGAAAGGTTTGAAGAA+TGG - chr2.1:9077859-9077878 MS.gene028734:intron 25.0%
! CAAAGAATTCAAGTAAGATT+TGG + chr2.1:9075753-9075772 None:intergenic 25.0%
! CAAATCTTACTTGAATTCTT+TGG - chr2.1:9075751-9075770 MS.gene028734:intron 25.0%
! CATCTTTAGATTTCTGAATA+AGG + chr2.1:9074368-9074387 None:intergenic 25.0%
! CTTAACTCATTGAAATGAAA+TGG - chr2.1:9074757-9074776 MS.gene028734:CDS 25.0%
! CTTATTCAGAAATCTAAAGA+TGG - chr2.1:9074366-9074385 MS.gene028734:intron 25.0%
! GAAACAAAACAAATTAGCAA+GGG + chr2.1:9078893-9078912 None:intergenic 25.0%
! GATAAAACTGTAAATTTCAG+AGG - chr2.1:9076680-9076699 MS.gene028734:intron 25.0%
! GATTAACCTATCTATAAACA+GGG - chr2.1:9076893-9076912 MS.gene028734:CDS 25.0%
! TAAACTTTGACCTTAATATC+TGG + chr2.1:9075258-9075277 None:intergenic 25.0%
! TAAGCTATTCTATGCATAAT+TGG + chr2.1:9077728-9077747 None:intergenic 25.0%
! TGAAACAAAACAAATTAGCA+AGG + chr2.1:9078894-9078913 None:intergenic 25.0%
! TGATTAACCTATCTATAAAC+AGG - chr2.1:9076892-9076911 MS.gene028734:CDS 25.0%
! TGGTAAATCATACATCAATT+GGG - chr2.1:9075362-9075381 MS.gene028734:intron 25.0%
! TGGTTTAGATTAAGTATGTT+GGG - chr2.1:9078917-9078936 MS.gene028734:intron 25.0%
! TTATTACATCCTACTTACTT+TGG + chr2.1:9076940-9076959 None:intergenic 25.0%
! TTGGTTTAGATTAAGTATGT+TGG - chr2.1:9078916-9078935 MS.gene028734:intron 25.0%
! TTTATTAGTCCAAAGTAAGT+AGG - chr2.1:9076928-9076947 MS.gene028734:CDS 25.0%
!! AATGGTAGGTATCTTTTATT+TGG - chr2.1:9075774-9075793 MS.gene028734:intron 25.0%
!! TAGAAACTTCAAGTTCAAAA+TGG - chr2.1:9077047-9077066 MS.gene028734:intron 25.0%
!! TTAAAAATAAGAGTTGATCG+TGG - chr2.1:9077442-9077461 MS.gene028734:intron 25.0%
!! TTAATTCTTTTGATACAGGT+CGG - chr2.1:9077989-9078008 MS.gene028734:intron 25.0%
!! TTTTTGCAGTATGATTTTGA+TGG - chr2.1:9074781-9074800 MS.gene028734:CDS 25.0%
!!! AGATTATGAACATTTTTGGA+CGG + chr2.1:9077503-9077522 None:intergenic 25.0%
!!! TGTCTACGTTAATTGTTTTT+TGG - chr2.1:9075482-9075501 MS.gene028734:CDS 25.0%
!!! TTTGTTTTTGTTGTTGTTGT+TGG - chr2.1:9079108-9079127 MS.gene028734:intron 25.0%
!!! TTTTGCAGTATGATTTTGAT+GGG - chr2.1:9074782-9074801 MS.gene028734:CDS 25.0%
!!! TTTTTGGTTTATGGTTTACT+AGG - chr2.1:9075498-9075517 MS.gene028734:CDS 25.0%
AAAACACCCTGTTTATAGAT+AGG + chr2.1:9076902-9076921 None:intergenic 30.0%
AACTGACAATGAACCATTTA+AGG - chr2.1:9075022-9075041 MS.gene028734:CDS 30.0%
AACTTACATGAACCTGTTAA+AGG - chr2.1:9074423-9074442 MS.gene028734:intron 30.0%
AAGTACAGAATCATCTATCA+GGG + chr2.1:9077221-9077240 None:intergenic 30.0%
AATGCAATGCTCAAAGAAAA+TGG + chr2.1:9074488-9074507 None:intergenic 30.0%
ACATACCATACTCATCAATT+GGG + chr2.1:9076086-9076105 None:intergenic 30.0%
AGATAGTCTTTCTAAGCTTA+TGG + chr2.1:9074739-9074758 None:intergenic 30.0%
ATCTTGTAAGTTTCTTTCTC+TGG - chr2.1:9076500-9076519 MS.gene028734:CDS 30.0%
ATGAAGATTAATACCTGCAA+TGG - chr2.1:9075595-9075614 MS.gene028734:intron 30.0%
ATGTAAGTTCCAGAAAACAT+AGG + chr2.1:9074412-9074431 None:intergenic 30.0%
ATTACCTTGTACCAAATCAA+CGG + chr2.1:9078094-9078113 None:intergenic 30.0%
ATTCAGAAATCTAAAGATGG+AGG - chr2.1:9074369-9074388 MS.gene028734:intron 30.0%
CAAAACATGAAACTTACGAT+TGG + chr2.1:9075459-9075478 None:intergenic 30.0%
CTAAAACAAAGCCAAAAATG+TGG - chr2.1:9075647-9075666 MS.gene028734:intron 30.0%
CTGGTAAATCATACATCAAT+TGG - chr2.1:9075361-9075380 MS.gene028734:intron 30.0%
CTTGTATTGTTTGAGGAAAA+TGG - chr2.1:9078575-9078594 MS.gene028734:CDS 30.0%
GAGATTACCTGATTATGATT+AGG + chr2.1:9078749-9078768 None:intergenic 30.0%
GCTTTCAACAATTAGCAATT+CGG + chr2.1:9074559-9074578 None:intergenic 30.0%
GTAGCAAAAGATATTTGTGT+TGG + chr2.1:9078608-9078627 None:intergenic 30.0%
GTTTCCCTTGATATAAGTTA+TGG - chr2.1:9078131-9078150 MS.gene028734:CDS 30.0%
TAAATGGTTCATTGTCAGTT+CGG + chr2.1:9075022-9075041 None:intergenic 30.0%
TAATGCAACATGTATGTCAT+TGG + chr2.1:9078208-9078227 None:intergenic 30.0%
TAGATTAAGTATGTTGGGTA+TGG - chr2.1:9078922-9078941 MS.gene028734:intron 30.0%
TAGTTTACTGATATGTGAGT+AGG - chr2.1:9078949-9078968 MS.gene028734:intron 30.0%
TATATGCTGCAGGAATTATT+AGG - chr2.1:9076269-9076288 MS.gene028734:CDS 30.0%
TCATCTTAAAGATTTGCACA+AGG - chr2.1:9076306-9076325 MS.gene028734:intron 30.0%
TCTATGATCATAATCCACAT+TGG + chr2.1:9074177-9074196 None:intergenic 30.0%
TTAGATTTCTGAATAAGGTC+TGG + chr2.1:9074363-9074382 None:intergenic 30.0%
TTAGTATGTTACAACAACTC+TGG + chr2.1:9079316-9079335 None:intergenic 30.0%
TTCAAAATGGAGTTGGATAA+AGG - chr2.1:9077060-9077079 MS.gene028734:intron 30.0%
TTCAAACCTTTCAATATCAC+TGG + chr2.1:9077856-9077875 None:intergenic 30.0%
TTGAAACTCAAATGAAGTCA+AGG - chr2.1:9077403-9077422 MS.gene028734:intron 30.0%
! ACAATGAACCATTTAAGGTA+AGG - chr2.1:9075027-9075046 MS.gene028734:intron 30.0%
! AGGACCTATAATTTTATCTC+AGG - chr2.1:9075193-9075212 MS.gene028734:CDS 30.0%
! ATACTAAGATTGCTCTTTTC+TGG + chr2.1:9075535-9075554 None:intergenic 30.0%
! CAAAAATGTGGACTGAAAAT+TGG - chr2.1:9075659-9075678 MS.gene028734:CDS 30.0%
! CAATTTTCAGTCCACATTTT+TGG + chr2.1:9075661-9075680 None:intergenic 30.0%
! CTTACTTGAATTCTTTGGAA+TGG - chr2.1:9075756-9075775 MS.gene028734:intron 30.0%
! GGAGTATCAACTAATACATT+TGG - chr2.1:9079383-9079402 MS.gene028734:CDS 30.0%
! GGAGTTAATTCTTTTGATAC+AGG - chr2.1:9077985-9078004 MS.gene028734:intron 30.0%
! TCATAACTTGTAGCAATGAA+TGG + chr2.1:9076054-9076073 None:intergenic 30.0%
! TCATTGAAACCTATGTTTTC+TGG - chr2.1:9074400-9074419 MS.gene028734:intron 30.0%
! TCTTTTACTATTTAAACCGC+AGG - chr2.1:9076595-9076614 MS.gene028734:intron 30.0%
!! TGACATTTGGTTTGAGTAAA+AGG + chr2.1:9078391-9078410 None:intergenic 30.0%
!! TTGTAAAGAAGGTGTTTATC+TGG - chr2.1:9078858-9078877 MS.gene028734:intron 30.0%
!!! ATCGTGGATTTTTTTTTCGA+GGG - chr2.1:9077458-9077477 MS.gene028734:intron 30.0%
!!! TTTGGCTTTGTTTTAGAGTT+TGG + chr2.1:9075643-9075662 None:intergenic 30.0%
AAAATTATAGGTCCTCCTTG+TGG + chr2.1:9075188-9075207 None:intergenic 35.0%
AAACAAATTAGCAAGGGAAC+AGG + chr2.1:9078887-9078906 None:intergenic 35.0%
AAAGCATGACTCAACAAGTT+TGG - chr2.1:9074574-9074593 MS.gene028734:intron 35.0%
AACACTTACAATGTCTGTGA+TGG + chr2.1:9078430-9078449 None:intergenic 35.0%
AAGACTGTTAAGACCTAATC+TGG + chr2.1:9076579-9076598 None:intergenic 35.0%
ACCAAATGTCACATGAATTG+TGG - chr2.1:9078400-9078419 MS.gene028734:CDS 35.0%
ACTACTTGTGGTACTCATTA+AGG - chr2.1:9077164-9077183 MS.gene028734:intron 35.0%
AGACAAACCTAAGCTTAATG+TGG - chr2.1:9077609-9077628 MS.gene028734:intron 35.0%
AGTCTTTCTAAGCTTATGGT+AGG + chr2.1:9074735-9074754 None:intergenic 35.0%
ATGAAACTTACGATTGGATC+AGG + chr2.1:9075453-9075472 None:intergenic 35.0%
CAACACTCTTGTATTGTTTG+AGG - chr2.1:9078568-9078587 MS.gene028734:CDS 35.0%
CAAGTGTCCTAATCATAATC+AGG - chr2.1:9078739-9078758 MS.gene028734:CDS 35.0%
CACAAACATATGGACCAATA+CGG + chr2.1:9074867-9074886 None:intergenic 35.0%
CATACCATACTCATCAATTG+GGG + chr2.1:9076085-9076104 None:intergenic 35.0%
CTTGACTAAAAACAGTACCA+TGG - chr2.1:9075997-9076016 MS.gene028734:intron 35.0%
CTTGCAGGTAATTATTCACT+AGG - chr2.1:9077361-9077380 MS.gene028734:intron 35.0%
GAAGGTTACCTTACCTTAAA+TGG + chr2.1:9075038-9075057 None:intergenic 35.0%
GAAGTACAGAATCATCTATC+AGG + chr2.1:9077222-9077241 None:intergenic 35.0%
GACATACCATACTCATCAAT+TGG + chr2.1:9076087-9076106 None:intergenic 35.0%
GATTTCAGTATGAAGGTTGA+AGG + chr2.1:9076109-9076128 None:intergenic 35.0%
GGATCAAGAAGTTGTAGTAT+TGG - chr2.1:9079362-9079381 MS.gene028734:CDS 35.0%
GGATTATGATCATAGAGCAT+TGG - chr2.1:9074181-9074200 MS.gene028734:CDS 35.0%
GGGTATTCATGTCTAATTGA+GGG - chr2.1:9074937-9074956 MS.gene028734:CDS 35.0%
GTAATGAGAGAAATCATTGG+AGG + chr2.1:9077753-9077772 None:intergenic 35.0%
GTATTGTTTGAGGAAAATGG+CGG - chr2.1:9078578-9078597 MS.gene028734:CDS 35.0%
TATAAACCACCTATACCTCT+AGG + chr2.1:9076396-9076415 None:intergenic 35.0%
TCAGGTGGTAAAATGTTGTA+GGG + chr2.1:9079228-9079247 None:intergenic 35.0%
TCATATGCACATCAGAACTA+TGG - chr2.1:9077793-9077812 MS.gene028734:intron 35.0%
TCCACAATTCATGTGACATT+TGG + chr2.1:9078404-9078423 None:intergenic 35.0%
TCCATCAAATTTGCAAGCTA+TGG - chr2.1:9078770-9078789 MS.gene028734:intron 35.0%
TGCCAGATTGAAAATGAGTA+TGG - chr2.1:9075312-9075331 MS.gene028734:CDS 35.0%
TGCTTCTTCACAAAGCTTTA+TGG + chr2.1:9076332-9076351 None:intergenic 35.0%
TGTAGTGCTTAATACTGCAA+AGG - chr2.1:9076757-9076776 MS.gene028734:intron 35.0%
TTCCATTCAGCACAAACATA+TGG + chr2.1:9074877-9074896 None:intergenic 35.0%
TTTACTATTTAAACCGCAGG+CGG - chr2.1:9076598-9076617 MS.gene028734:intron 35.0%
! AAATCAACGGTTGGTTCTTA+GGG + chr2.1:9078081-9078100 None:intergenic 35.0%
! AACATCTTATTTCGCGTCTT+AGG - chr2.1:9076437-9076456 MS.gene028734:CDS 35.0%
! ATTTCTTTGCTATATGCTGC+AGG - chr2.1:9076259-9076278 MS.gene028734:CDS 35.0%
! CTCCATACTCATTTTCAATC+TGG + chr2.1:9075317-9075336 None:intergenic 35.0%
! CTTCAAGTTCAAAATGGAGT+TGG - chr2.1:9077053-9077072 MS.gene028734:intron 35.0%
! GACAAAAGCATGAAACACTA+GGG + chr2.1:9075062-9075081 None:intergenic 35.0%
! GACCTAAATCTTCACCTTTT+AGG + chr2.1:9078015-9078034 None:intergenic 35.0%
! GCATTTGAAGCAACATATGT+AGG + chr2.1:9078337-9078356 None:intergenic 35.0%
! TCCATAGCTTGCAAATTTGA+TGG + chr2.1:9078774-9078793 None:intergenic 35.0%
! TTTGCCACAACCACTATTTT+AGG - chr2.1:9076547-9076566 MS.gene028734:CDS 35.0%
! TTTTAGGCACTAACCAGATT+AGG - chr2.1:9076563-9076582 MS.gene028734:CDS 35.0%
!! AGGTATCTTTTATTTGGTGG+TGG - chr2.1:9075780-9075799 MS.gene028734:intron 35.0%
!! CTTGAATTCTTTGGAATGGT+AGG - chr2.1:9075760-9075779 MS.gene028734:intron 35.0%
!! GGTAGGTATCTTTTATTTGG+TGG - chr2.1:9075777-9075796 MS.gene028734:intron 35.0%
!! TCTTTAAGATGACTCCACTT+CGG + chr2.1:9076298-9076317 None:intergenic 35.0%
!! TTTCCAGAAAGTACTGTGAT+CGG + chr2.1:9077640-9077659 None:intergenic 35.0%
!!! AATACAAGAGTGTTGCCTTT+TGG + chr2.1:9078563-9078582 None:intergenic 35.0%
!!! ATGGAGCTTTTTTTGACACA+TGG - chr2.1:9077812-9077831 MS.gene028734:intron 35.0%
!!! CTTTTGAAGCGTTGATCTTA+AGG - chr2.1:9077264-9077283 MS.gene028734:CDS 35.0%
!!! GATCGTGGATTTTTTTTTCG+AGG - chr2.1:9077457-9077476 MS.gene028734:intron 35.0%
!!! TGGAGCTTTTTTTGACACAT+GGG - chr2.1:9077813-9077832 MS.gene028734:intron 35.0%
!!! TGTTGTTGTTGGTTTTAAGC+TGG - chr2.1:9079119-9079138 MS.gene028734:intron 35.0%
AAACGTAGGGTCTTGATTTC+TGG - chr2.1:9074215-9074234 MS.gene028734:intron 40.0%
AAAGAGAGACAGAAAACCTG+TGG + chr2.1:9074266-9074285 None:intergenic 40.0%
AACCAAGATACAGAATCAGG+GGG - chr2.1:9078692-9078711 MS.gene028734:CDS 40.0%
AACGATGTTATGCACCAATG+TGG - chr2.1:9074160-9074179 MS.gene028734:CDS 40.0%
AATTCTTAGGGAGTCAAACC+GGG - chr2.1:9077581-9077600 MS.gene028734:intron 40.0%
ACAAACTTTGATGCTCCATC+CGG - chr2.1:9078229-9078248 MS.gene028734:CDS 40.0%
ACAACTTCTTGATCCAATGC+AGG + chr2.1:9079357-9079376 None:intergenic 40.0%
ACATTGGTGCATAACATCGT+TGG + chr2.1:9074161-9074180 None:intergenic 40.0%
ACCTTTCAATATCACTGGAC+CGG + chr2.1:9077851-9077870 None:intergenic 40.0%
AGCACTACATTCTTGCAATC+TGG + chr2.1:9076746-9076765 None:intergenic 40.0%
AGTCAATCGCAACTGGATTA+CGG + chr2.1:9078255-9078274 None:intergenic 40.0%
AGTGCCTAAAATAGTGGTTG+TGG + chr2.1:9076554-9076573 None:intergenic 40.0%
AGTTGGATAAAGGAACCTGT+GGG - chr2.1:9077070-9077089 MS.gene028734:intron 40.0%
ATCAGATTTAGTGTCCACGT+TGG + chr2.1:9076663-9076682 None:intergenic 40.0%
ATCGCAGTAAAATCCATTGC+AGG + chr2.1:9075611-9075630 None:intergenic 40.0%
ATGGCTACATCTCTTGATAC+AGG - chr2.1:9075393-9075412 MS.gene028734:intron 40.0%
ATTCATATCACTTGCCTGCA+TGG - chr2.1:9076705-9076724 MS.gene028734:intron 40.0%
ATTCTCCACTTCTCAGAACA+AGG + chr2.1:9079169-9079188 None:intergenic 40.0%
CAAATATCTTTCGAACGTGG+AGG + chr2.1:9077198-9077217 None:intergenic 40.0%
CAAGATTTGATCGTGGAGTT+CGG + chr2.1:9079083-9079102 None:intergenic 40.0%
CAAGTAGTCACTTCTATCAG+CGG + chr2.1:9077152-9077171 None:intergenic 40.0%
CATCAATTGGGCAGCAAAAA+TGG - chr2.1:9075374-9075393 MS.gene028734:intron 40.0%
CATGACCAACACAATTGTAG+TGG + chr2.1:9074126-9074145 None:intergenic 40.0%
CATGAGATCGACAATCTTAG+CGG + chr2.1:9075144-9075163 None:intergenic 40.0%
CTATATGTGCATCTCCGTAT+TGG - chr2.1:9074850-9074869 MS.gene028734:CDS 40.0%
CTCAGGTGGTAAAATGTTGT+AGG + chr2.1:9079229-9079248 None:intergenic 40.0%
CTGATAGAAGTGACTACTTG+TGG - chr2.1:9077152-9077171 MS.gene028734:intron 40.0%
CTGGTTAGTGCCTAAAATAG+TGG + chr2.1:9076560-9076579 None:intergenic 40.0%
CTTAGGTTTGTCTTTGTTCC+CGG + chr2.1:9077602-9077621 None:intergenic 40.0%
GAAAGCCACTACAATTGTGT+TGG - chr2.1:9074118-9074137 MS.gene028734:CDS 40.0%
GAAATGAAGCAAAGAGAACC+TGG + chr2.1:9074449-9074468 None:intergenic 40.0%
GAACCAAGATACAGAATCAG+GGG - chr2.1:9078691-9078710 MS.gene028734:CDS 40.0%
GAACCCAAGATTACTTCTCT+TGG - chr2.1:9076364-9076383 MS.gene028734:intron 40.0%
GAACTTGTGAACAACGTTTC+AGG + chr2.1:9075900-9075919 None:intergenic 40.0%
GAAGATTTAGGTCTCTCTAG+TGG - chr2.1:9078022-9078041 MS.gene028734:intron 40.0%
GAATGAAGTGAAGCCAAAGA+GGG + chr2.1:9074986-9075005 None:intergenic 40.0%
GAATTCTTAGGGAGTCAAAC+CGG - chr2.1:9077580-9077599 MS.gene028734:intron 40.0%
GACTAAAAACAGTACCATGG+AGG - chr2.1:9076000-9076019 MS.gene028734:intron 40.0%
GAGTTTAACAGTTGGACTTC+AGG - chr2.1:9077678-9077697 MS.gene028734:intron 40.0%
GATCTGCTGAGTTTAACAGT+TGG - chr2.1:9077670-9077689 MS.gene028734:intron 40.0%
GCAAAATTGCACTCAATCCA+GGG + chr2.1:9076532-9076551 None:intergenic 40.0%
GCTTCAACAGCTAAACTCTT+TGG + chr2.1:9079428-9079447 None:intergenic 40.0%
GGAACCAAGATACAGAATCA+GGG - chr2.1:9078690-9078709 MS.gene028734:CDS 40.0%
GGACCAAGAGAAGTAATCTT+GGG + chr2.1:9076370-9076389 None:intergenic 40.0%
GGCAAGTGAACTCAGATTTA+AGG + chr2.1:9075084-9075103 None:intergenic 40.0%
GGCCTAAAAGGTGAAGATTT+AGG - chr2.1:9078010-9078029 MS.gene028734:intron 40.0%
GGTGAAATTTGTGAAAGCAG+TGG - chr2.1:9074816-9074835 MS.gene028734:CDS 40.0%
GTCCATATGTTTGTGCTGAA+TGG - chr2.1:9074872-9074891 MS.gene028734:CDS 40.0%
GTTGATCTTAAGGATGATCC+TGG - chr2.1:9077274-9077293 MS.gene028734:CDS 40.0%
GTTTGTGCTGAATGGAACTA+CGG - chr2.1:9074880-9074899 MS.gene028734:CDS 40.0%
TAAATCTGAGTTCACTTGCC+AGG - chr2.1:9075084-9075103 MS.gene028734:intron 40.0%
TACCACCTGAGTTATACTCA+CGG - chr2.1:9079238-9079257 MS.gene028734:intron 40.0%
TACCAGTGTTGCATTTGTGA+CGG + chr2.1:9076149-9076168 None:intergenic 40.0%
TCTGAGAAGTGGAGAATTGT+GGG - chr2.1:9079172-9079191 MS.gene028734:CDS 40.0%
TCTTATTAACAGGCCTGCAT+TGG - chr2.1:9079341-9079360 MS.gene028734:CDS 40.0%
TCTTGATACAGGTGTTCCTT+GGG - chr2.1:9075404-9075423 MS.gene028734:intron 40.0%
TGAAGGAAAGTTTGAGAACC+AGG + chr2.1:9077295-9077314 None:intergenic 40.0%
TGATTTACCAGCAGAACCAT+AGG + chr2.1:9075352-9075371 None:intergenic 40.0%
TGCATTTGTTCATTGCTTGC+AGG - chr2.1:9074507-9074526 MS.gene028734:intron 40.0%
TGGAACCAAGATACAGAATC+AGG - chr2.1:9078689-9078708 MS.gene028734:CDS 40.0%
TGGACCAAGAGAAGTAATCT+TGG + chr2.1:9076371-9076390 None:intergenic 40.0%
TGGGTAAATGGACAAAGCAT+TGG - chr2.1:9078301-9078320 MS.gene028734:intron 40.0%
TGTAGGGACATTTGATGTGT+TGG + chr2.1:9079212-9079231 None:intergenic 40.0%
TTCCTTCACATTGAATCGCT+CGG - chr2.1:9077307-9077326 MS.gene028734:intron 40.0%
TTTCGAGGGATAGTTGATCA+TGG - chr2.1:9077472-9077491 MS.gene028734:intron 40.0%
TTTGTGCTGAATGGAACTAC+GGG - chr2.1:9074881-9074900 MS.gene028734:CDS 40.0%
! CAAATCAACGGTTGGTTCTT+AGG + chr2.1:9078082-9078101 None:intergenic 40.0%
! CAATTGTGTTGGTCATGCTT+TGG - chr2.1:9074129-9074148 MS.gene028734:CDS 40.0%
! CTAAGAACCAACCGTTGATT+TGG - chr2.1:9078080-9078099 MS.gene028734:intron 40.0%
! GGACAAAAGCATGAAACACT+AGG + chr2.1:9075063-9075082 None:intergenic 40.0%
! GGGGTATTCATGTCTAATTG+AGG - chr2.1:9074936-9074955 MS.gene028734:CDS 40.0%
! GGGTAAATGGACAAAGCATT+GGG - chr2.1:9078302-9078321 MS.gene028734:intron 40.0%
! GGTCATTGATGGTAAACGTA+GGG - chr2.1:9074202-9074221 MS.gene028734:CDS 40.0%
! TCTTTCTCTGGAAAATTCCC+TGG - chr2.1:9076512-9076531 MS.gene028734:CDS 40.0%
! TGGTCATTGATGGTAAACGT+AGG - chr2.1:9074201-9074220 MS.gene028734:CDS 40.0%
! TTCTGAGAAGTGGAGAATTG+TGG - chr2.1:9079171-9079190 MS.gene028734:CDS 40.0%
! TTTGGCTTCACTTCATTCCA+GGG - chr2.1:9074988-9075007 MS.gene028734:CDS 40.0%
! TTTGGTTTCAAAAACGACCG+TGG + chr2.1:9078545-9078564 None:intergenic 40.0%
! TTTTGATGGGAGGAAGGATT+TGG - chr2.1:9074795-9074814 MS.gene028734:CDS 40.0%
!! ACGGAAAAATTGGCTCTAAG+AGG - chr2.1:9075944-9075963 MS.gene028734:CDS 40.0%
!! ATTGCTCTTTTCTGGAAGAC+AGG + chr2.1:9075527-9075546 None:intergenic 40.0%
!! CATAGAGCATTGGTCATTGA+TGG - chr2.1:9074191-9074210 MS.gene028734:CDS 40.0%
!! GTATGATTTTGATGGGAGGA+AGG - chr2.1:9074789-9074808 MS.gene028734:CDS 40.0%
!! TGCAGTATGATTTTGATGGG+AGG - chr2.1:9074785-9074804 MS.gene028734:CDS 40.0%
!! TTCCAGAAAGTACTGTGATC+GGG + chr2.1:9077639-9077658 None:intergenic 40.0%
!!! CGGTCGTTTTTGAAACCAAA+AGG - chr2.1:9078545-9078564 MS.gene028734:CDS 40.0%
!!! GGAGCTTTTTTTGACACATG+GGG - chr2.1:9077814-9077833 MS.gene028734:intron 40.0%
!!! GTTGGTTTTAAGCTGGTTAG+CGG - chr2.1:9079126-9079145 MS.gene028734:intron 40.0%
!!! TTTTTTTGACACATGGGGAG+CGG - chr2.1:9077819-9077838 MS.gene028734:intron 40.0%
AAACTGTATGCACCACAAGG+AGG - chr2.1:9075173-9075192 MS.gene028734:CDS 45.0%
AAAGGTGAGGCTTGGGTAAA+TGG - chr2.1:9078289-9078308 MS.gene028734:intron 45.0%
AAGCTATGGAACACCACTAG+GGG - chr2.1:9078784-9078803 MS.gene028734:intron 45.0%
ACACTCTTGATCTCTCCACT+CGG - chr2.1:9077887-9077906 MS.gene028734:CDS 45.0%
ACAGAATCAGGGGGAAAGAT+AGG - chr2.1:9078701-9078720 MS.gene028734:CDS 45.0%
ACAGACTCATGCAACTACAG+AGG - chr2.1:9078364-9078383 MS.gene028734:CDS 45.0%
ACATGAACCTGTTAAAGGCC+AGG - chr2.1:9074428-9074447 MS.gene028734:intron 45.0%
ACATTTGGAGACCCTTGTAG+AGG - chr2.1:9079398-9079417 MS.gene028734:CDS 45.0%
ACCAACTTTGACCGAAGTAC+TGG - chr2.1:9076024-9076043 MS.gene028734:intron 45.0%
ACCACCTATACCTCTAGGTT+TGG + chr2.1:9076391-9076410 None:intergenic 45.0%
ACCACCTGAGTTATACTCAC+GGG - chr2.1:9079239-9079258 MS.gene028734:intron 45.0%
ACCGGTCCAGTGATATTGAA+AGG - chr2.1:9077847-9077866 MS.gene028734:intron 45.0%
AGACTGTGAATTCCATCCTC+CGG + chr2.1:9078053-9078072 None:intergenic 45.0%
AGCATGAAACACTAGGGTGA+AGG + chr2.1:9075056-9075075 None:intergenic 45.0%
AGCGGTGAATCGCTTCATTT+CGG + chr2.1:9075126-9075145 None:intergenic 45.0%
ATCCCGATCACAGTACTTTC+TGG - chr2.1:9077634-9077653 MS.gene028734:intron 45.0%
ATTTGTGAAAGCAGTGGCTG+AGG - chr2.1:9074822-9074841 MS.gene028734:CDS 45.0%
CAAGCTATGGAACACCACTA+GGG - chr2.1:9078783-9078802 MS.gene028734:intron 45.0%
CAGAATCAGGGGGAAAGATA+GGG - chr2.1:9078702-9078721 MS.gene028734:CDS 45.0%
CAGGCGGCAATTTATAAGAC+AGG - chr2.1:9076614-9076633 MS.gene028734:intron 45.0%
CATTTGATGTGTTGGAACGC+AGG + chr2.1:9079204-9079223 None:intergenic 45.0%
CCTTGTACCAAATCAACGGT+TGG + chr2.1:9078090-9078109 None:intergenic 45.0%
CTCTTGATACAGGTGTTCCT+TGG - chr2.1:9075403-9075422 MS.gene028734:intron 45.0%
GAATTATTAGGCAGCCGAAG+TGG - chr2.1:9076281-9076300 MS.gene028734:CDS 45.0%
GAGAAACTGTATGCACCACA+AGG - chr2.1:9075170-9075189 MS.gene028734:CDS 45.0%
GAGTTGGATAAAGGAACCTG+TGG - chr2.1:9077069-9077088 MS.gene028734:intron 45.0%
GATGCCCCAATTGATGAGTA+TGG - chr2.1:9076078-9076097 MS.gene028734:intron 45.0%
GCTGTAGACGTAGACACAAT+TGG - chr2.1:9079057-9079076 MS.gene028734:intron 45.0%
GGAATGAAGTGAAGCCAAAG+AGG + chr2.1:9074987-9075006 None:intergenic 45.0%
GGACTGAAAATTGGAGTGCA+TGG - chr2.1:9075668-9075687 MS.gene028734:CDS 45.0%
GGCAAAATTGCACTCAATCC+AGG + chr2.1:9076533-9076552 None:intergenic 45.0%
GGCGCTGTCAATTGTAAAGA+AGG - chr2.1:9078847-9078866 MS.gene028734:intron 45.0%
GGGATGTCCACATTAAGCTT+AGG + chr2.1:9077619-9077638 None:intergenic 45.0%
GGGCAAATATCTTTCGAACG+TGG + chr2.1:9077201-9077220 None:intergenic 45.0%
GGTCTCTCTAGTGGAAATTC+CGG - chr2.1:9078031-9078050 MS.gene028734:intron 45.0%
GTCTTATAAATTGCCGCCTG+CGG + chr2.1:9076614-9076633 None:intergenic 45.0%
GTTGCATGAGTCTGTGCAAT+CGG + chr2.1:9078359-9078378 None:intergenic 45.0%
TCAGTTCGGAACTTAATCCC+TGG + chr2.1:9075008-9075027 None:intergenic 45.0%
TCATCCTTCGAAATACCCAC+AGG + chr2.1:9077088-9077107 None:intergenic 45.0%
TCTTTGGCACTCCTCTACAA+GGG + chr2.1:9079412-9079431 None:intergenic 45.0%
TGCCAGGAAACTTTGTCTTC+AGG - chr2.1:9075100-9075119 MS.gene028734:intron 45.0%
TGGTAGGTCTAGACCATGTT+TGG + chr2.1:9074719-9074738 None:intergenic 45.0%
TGGTGCATAACATCGTTGGT+AGG + chr2.1:9074157-9074176 None:intergenic 45.0%
TGGTTCCACGAGTCTATTTG+AGG + chr2.1:9078677-9078696 None:intergenic 45.0%
TTCCACGAGTCTATTTGAGG+TGG + chr2.1:9078674-9078693 None:intergenic 45.0%
TTCCCCCTGATTCTGTATCT+TGG + chr2.1:9078697-9078716 None:intergenic 45.0%
TTCGTAAATGGCAAGCTTGC+AGG - chr2.1:9077346-9077365 MS.gene028734:intron 45.0%
TTCTCTTGGTCCAAACCTAG+AGG - chr2.1:9076378-9076397 MS.gene028734:intron 45.0%
TTGACAGTGGTTTCCCTCTT+TGG - chr2.1:9074970-9074989 MS.gene028734:CDS 45.0%
TTGATACAGGTCGGCCTAAA+AGG - chr2.1:9077998-9078017 MS.gene028734:intron 45.0%
TTGTCCCGTGAGTATAACTC+AGG + chr2.1:9079246-9079265 None:intergenic 45.0%
! AAAACCTGTGGAGTACTACG+AGG + chr2.1:9074254-9074273 None:intergenic 45.0%
! AAACCTGTGGAGTACTACGA+GGG + chr2.1:9074253-9074272 None:intergenic 45.0%
! AAGAGAACCTGGCCTTTAAC+AGG + chr2.1:9074438-9074457 None:intergenic 45.0%
! CTTTGGCTTCACTTCATTCC+AGG - chr2.1:9074987-9075006 MS.gene028734:CDS 45.0%
! GCCATTTACGAAGGCATGAA+GGG + chr2.1:9077338-9077357 None:intergenic 45.0%
! GGGCTTTAACTTCTTGACAG+TGG - chr2.1:9074957-9074976 MS.gene028734:CDS 45.0%
! TCCAAACCTAGAGGTATAGG+TGG - chr2.1:9076387-9076406 MS.gene028734:intron 45.0%
! TCCACGAGTCTATTTGAGGT+GGG + chr2.1:9078673-9078692 None:intergenic 45.0%
! TCCAGTTGCGATTGACTTCA+CGG - chr2.1:9078258-9078277 MS.gene028734:intron 45.0%
! TGCAAGCTTGCCATTTACGA+AGG + chr2.1:9077347-9077366 None:intergenic 45.0%
! TGCCATTTACGAAGGCATGA+AGG + chr2.1:9077339-9077358 None:intergenic 45.0%
! TGGTCCAAACCTAGAGGTAT+AGG - chr2.1:9076384-9076403 MS.gene028734:intron 45.0%
! TTTGAAATGTACCGCCTCGT+TGG + chr2.1:9075857-9075876 None:intergenic 45.0%
!! AACTTTGACCGAAGTACTGG+CGG - chr2.1:9076027-9076046 MS.gene028734:intron 45.0%
!! ACACACCTTGTTCTGAGAAG+TGG - chr2.1:9079161-9079180 MS.gene028734:CDS 45.0%
!! CCAACCGTTGATTTGGTACA+AGG - chr2.1:9078087-9078106 MS.gene028734:intron 45.0%
!!! TTTTTTGACACATGGGGAGC+GGG - chr2.1:9077820-9077839 MS.gene028734:intron 45.0%
!!! TAAAAATAACATTTTTATTA+TGG - chr2.1:9076957-9076976 MS.gene028734:intron 5.0%
AAGATGCTCACAGACCATGC+AGG + chr2.1:9076722-9076741 None:intergenic 50.0%
AATCGCAACTGGATTACGGC+CGG + chr2.1:9078251-9078270 None:intergenic 50.0%
ACCCACCTCAAATAGACTCG+TGG - chr2.1:9078669-9078688 MS.gene028734:intron 50.0%
AGATCTTCCACAGGTCTGTG+AGG + chr2.1:9075810-9075829 None:intergenic 50.0%
AGCCGTCACAAATGCAACAC+TGG - chr2.1:9076144-9076163 MS.gene028734:intron 50.0%
ATCACAAGTGAAGACCGACC+TGG + chr2.1:9077924-9077943 None:intergenic 50.0%
CTACGTCTACAGCTGCAAAG+TGG + chr2.1:9079050-9079069 None:intergenic 50.0%
CTAGTGGAAATTCCGGAGGA+TGG - chr2.1:9078038-9078057 MS.gene028734:intron 50.0%
CTCTCTAGTGGAAATTCCGG+AGG - chr2.1:9078034-9078053 MS.gene028734:intron 50.0%
CTCTTTGGCACTCCTCTACA+AGG + chr2.1:9079413-9079432 None:intergenic 50.0%
GATGGGAAAAGGTGAGGCTT+GGG - chr2.1:9078282-9078301 MS.gene028734:intron 50.0%
GCAAATGCGAGATCTTCCAC+AGG + chr2.1:9075819-9075838 None:intergenic 50.0%
GCAAGCTATGGAACACCACT+AGG - chr2.1:9078782-9078801 MS.gene028734:intron 50.0%
GCACGTGGTATCTGTGAGAT+GGG + chr2.1:9078523-9078542 None:intergenic 50.0%
GCCAGTACTTCGGTCAAAGT+TGG + chr2.1:9076028-9076047 None:intergenic 50.0%
GCCCTTCATGCCTTCGTAAA+TGG - chr2.1:9077334-9077353 MS.gene028734:intron 50.0%
GGAACCTGTGGGTATTTCGA+AGG - chr2.1:9077081-9077100 MS.gene028734:intron 50.0%
GGACACTTGAGCAACAGTTC+AGG + chr2.1:9078728-9078747 None:intergenic 50.0%
GGCCTGAAGACAAAGTTTCC+TGG + chr2.1:9075105-9075124 None:intergenic 50.0%
TCCCGTGAGTATAACTCAGG+TGG + chr2.1:9079243-9079262 None:intergenic 50.0%
TCTTGCTGACACATGACCCA+AGG + chr2.1:9075423-9075442 None:intergenic 50.0%
TGAATGGTCCGCCAGTACTT+CGG + chr2.1:9076038-9076057 None:intergenic 50.0%
TGGATTTCCTCACAGACCTG+TGG - chr2.1:9075800-9075819 MS.gene028734:intron 50.0%
TGTGAGTAGGTTGCTTGAGC+TGG - chr2.1:9078962-9078981 MS.gene028734:intron 50.0%
TTGATCTCTCCACTCGGAAG+TGG - chr2.1:9077893-9077912 MS.gene028734:CDS 50.0%
! CAGTTGCGATTGACTTCACG+GGG - chr2.1:9078260-9078279 MS.gene028734:intron 50.0%
! CCAGTTGCGATTGACTTCAC+GGG - chr2.1:9078259-9078278 MS.gene028734:intron 50.0%
! GATTCAGCCTATGGTTCTGC+TGG - chr2.1:9075342-9075361 MS.gene028734:intron 50.0%
! GGTCAAAGTTGGTTCCTCCA+TGG + chr2.1:9076017-9076036 None:intergenic 50.0%
! TTACGAAGGCATGAAGGGCA+TGG + chr2.1:9077333-9077352 None:intergenic 50.0%
! TTTTTGACACATGGGGAGCG+GGG - chr2.1:9077821-9077840 MS.gene028734:intron 50.0%
!! GACAAAGCATTGGGCGATAC+TGG - chr2.1:9078311-9078330 MS.gene028734:intron 50.0%
!! GGAGACATCGATTCAGCCTA+TGG - chr2.1:9075333-9075352 MS.gene028734:intron 50.0%
AGTGTCCACGTTGGCGAGAA+AGG + chr2.1:9076654-9076673 None:intergenic 55.0%
CACTCGGAAGTGGACATACC+AGG - chr2.1:9077903-9077922 MS.gene028734:CDS 55.0%
CCCGTGAAGTCAATCGCAAC+TGG + chr2.1:9078262-9078281 None:intergenic 55.0%
CGGAAGTGGACATACCAGGT+CGG - chr2.1:9077907-9077926 MS.gene028734:CDS 55.0%
CTACCCTCGTAGTACTCCAC+AGG - chr2.1:9074247-9074266 MS.gene028734:intron 55.0%
CTCACAGATACCACGTGCCA+CGG - chr2.1:9078525-9078544 MS.gene028734:intron 55.0%
CTGGTATGTCCACTTCCGAG+TGG + chr2.1:9077905-9077924 None:intergenic 55.0%
GACTTCACGGGGATGGGAAA+AGG - chr2.1:9078271-9078290 MS.gene028734:intron 55.0%
GGATGGGAAAAGGTGAGGCT+TGG - chr2.1:9078281-9078300 MS.gene028734:intron 55.0%
GGCACGTGGTATCTGTGAGA+TGG + chr2.1:9078524-9078543 None:intergenic 55.0%
GGCCGAGCGATTCAATGTGA+AGG + chr2.1:9077312-9077331 None:intergenic 55.0%
TCAAAAACGACCGTGGCACG+TGG + chr2.1:9078538-9078557 None:intergenic 55.0%
! GCGATTGACTTCACGGGGAT+GGG - chr2.1:9078265-9078284 MS.gene028734:intron 55.0%
! TGCGATTGACTTCACGGGGA+TGG - chr2.1:9078264-9078283 MS.gene028734:intron 55.0%
!!! GCACGCTTTTTCCAACGAGG+CGG - chr2.1:9075843-9075862 MS.gene028734:intron 55.0%
!!! GTCGCACGCTTTTTCCAACG+AGG - chr2.1:9075840-9075859 MS.gene028734:intron 55.0%
AAGTTTCCGCACGCCCCTAG+TGG + chr2.1:9078800-9078819 None:intergenic 60.0%
CACGGGGATGGGAAAAGGTG+AGG - chr2.1:9078276-9078295 MS.gene028734:intron 60.0%
CGGACGCTGCAGCAGCAATA+AGG - chr2.1:9078826-9078845 MS.gene028734:intron 60.0%
GCAACTGGATTACGGCCGGA+TGG + chr2.1:9078247-9078266 None:intergenic 60.0%
GCGTGCGGAAACTTCTACCG+CGG - chr2.1:9078806-9078825 MS.gene028734:intron 60.0%
GTGAAAGCAGTGGCTGAGGC+AGG - chr2.1:9074826-9074845 MS.gene028734:CDS 60.0%
TATTGCTGCTGCAGCGTCCG+CGG + chr2.1:9078826-9078845 None:intergenic 60.0%
TGCTGCCTTTCTCGCCAACG+TGG - chr2.1:9076646-9076665 MS.gene028734:intron 60.0%
ACATGGGGAGCGGGGATCAC+CGG - chr2.1:9077829-9077848 MS.gene028734:intron 65.0%
! GGAACACCACTAGGGGCGTG+CGG - chr2.1:9078791-9078810 MS.gene028734:intron 65.0%


Chromosome Type Strat End Strand Name
chr2.1 gene 9074116 9079460 9074116 ID=MS.gene028734
chr2.1 mRNA 9074116 9079460 9074116 ID=MS.gene028734.t1;Parent=MS.gene028734
chr2.1 exon 9079308 9079460 9079308 ID=MS.gene028734.t1.exon1;Parent=MS.gene028734.t1
chr2.1 CDS 9079308 9079460 9079308 ID=cds.MS.gene028734.t1;Parent=MS.gene028734.t1
chr2.1 exon 9079127 9079222 9079127 ID=MS.gene028734.t1.exon2;Parent=MS.gene028734.t1
chr2.1 CDS 9079127 9079222 9079127 ID=cds.MS.gene028734.t1;Parent=MS.gene028734.t1
chr2.1 exon 9078674 9078786 9078674 ID=MS.gene028734.t1.exon3;Parent=MS.gene028734.t1
chr2.1 CDS 9078674 9078786 9078674 ID=cds.MS.gene028734.t1;Parent=MS.gene028734.t1
chr2.1 exon 9078533 9078599 9078533 ID=MS.gene028734.t1.exon4;Parent=MS.gene028734.t1
chr2.1 CDS 9078533 9078599 9078533 ID=cds.MS.gene028734.t1;Parent=MS.gene028734.t1
chr2.1 exon 9078362 9078454 9078362 ID=MS.gene028734.t1.exon5;Parent=MS.gene028734.t1
chr2.1 CDS 9078362 9078454 9078362 ID=cds.MS.gene028734.t1;Parent=MS.gene028734.t1
chr2.1 exon 9078115 9078258 9078115 ID=MS.gene028734.t1.exon6;Parent=MS.gene028734.t1
chr2.1 CDS 9078115 9078258 9078115 ID=cds.MS.gene028734.t1;Parent=MS.gene028734.t1
chr2.1 exon 9077887 9077975 9077887 ID=MS.gene028734.t1.exon7;Parent=MS.gene028734.t1
chr2.1 CDS 9077887 9077975 9077887 ID=cds.MS.gene028734.t1;Parent=MS.gene028734.t1
chr2.1 exon 9077689 9077794 9077689 ID=MS.gene028734.t1.exon8;Parent=MS.gene028734.t1
chr2.1 CDS 9077689 9077794 9077689 ID=cds.MS.gene028734.t1;Parent=MS.gene028734.t1
chr2.1 exon 9077477 9077564 9077477 ID=MS.gene028734.t1.exon9;Parent=MS.gene028734.t1
chr2.1 CDS 9077477 9077564 9077477 ID=cds.MS.gene028734.t1;Parent=MS.gene028734.t1
chr2.1 exon 9077177 9077295 9077177 ID=MS.gene028734.t1.exon10;Parent=MS.gene028734.t1
chr2.1 CDS 9077177 9077295 9077177 ID=cds.MS.gene028734.t1;Parent=MS.gene028734.t1
chr2.1 exon 9076798 9076959 9076798 ID=MS.gene028734.t1.exon11;Parent=MS.gene028734.t1
chr2.1 CDS 9076798 9076959 9076798 ID=cds.MS.gene028734.t1;Parent=MS.gene028734.t1
chr2.1 exon 9076391 9076593 9076391 ID=MS.gene028734.t1.exon12;Parent=MS.gene028734.t1
chr2.1 CDS 9076391 9076593 9076391 ID=cds.MS.gene028734.t1;Parent=MS.gene028734.t1
chr2.1 exon 9076209 9076303 9076209 ID=MS.gene028734.t1.exon13;Parent=MS.gene028734.t1
chr2.1 CDS 9076209 9076303 9076209 ID=cds.MS.gene028734.t1;Parent=MS.gene028734.t1
chr2.1 exon 9075877 9075986 9075877 ID=MS.gene028734.t1.exon14;Parent=MS.gene028734.t1
chr2.1 CDS 9075877 9075986 9075877 ID=cds.MS.gene028734.t1;Parent=MS.gene028734.t1
chr2.1 exon 9075652 9075768 9075652 ID=MS.gene028734.t1.exon15;Parent=MS.gene028734.t1
chr2.1 CDS 9075652 9075768 9075652 ID=cds.MS.gene028734.t1;Parent=MS.gene028734.t1
chr2.1 exon 9075468 9075569 9075468 ID=MS.gene028734.t1.exon16;Parent=MS.gene028734.t1
chr2.1 CDS 9075468 9075569 9075468 ID=cds.MS.gene028734.t1;Parent=MS.gene028734.t1
chr2.1 exon 9075136 9075347 9075136 ID=MS.gene028734.t1.exon17;Parent=MS.gene028734.t1
chr2.1 CDS 9075136 9075347 9075136 ID=cds.MS.gene028734.t1;Parent=MS.gene028734.t1
chr2.1 exon 9074708 9075044 9074708 ID=MS.gene028734.t1.exon18;Parent=MS.gene028734.t1
chr2.1 CDS 9074708 9075044 9074708 ID=cds.MS.gene028734.t1;Parent=MS.gene028734.t1
chr2.1 exon 9074116 9074223 9074116 ID=MS.gene028734.t1.exon19;Parent=MS.gene028734.t1
chr2.1 CDS 9074116 9074223 9074116 ID=cds.MS.gene028734.t1;Parent=MS.gene028734.t1
Gene Sequence

>MS.gene028734

ATGAAAGCCACTACAATTGTGTTGGTCATGCTTTGGTTCCTACCAACGATGTTATGCACCAATGTGGATTATGATCATAGAGCATTGGTCATTGATGGTAAACGTAGGGTCTTGATTTCTGGTTCTATTCACTACCCTCGTAGTACTCCACAGGTTTTCTGTCTCTCTTTGATTCTGTTTTGTGAGTTTTTGCATTGTATTTGATTTTAAACAGTGTTGAATTTATTGTTTTTTATAGATGTGGCCAGACCTTATTCAGAAATCTAAAGATGGAGGACTTGATGTCATTGAAACCTATGTTTTCTGGAACTTACATGAACCTGTTAAAGGCCAGGTTCTCTTTGCTTCATTTCTTCTCTCACATTCTTACCATTTTCTTTGAGCATTGCATTGCATTTGTTCATTGCTTGCAGGAATAGAAAACAAGTGTCTATGTTAAGCCGAATTGCTAATTGTTGAAAGCATGACTCAACAAGTTTGGATTGACTTATTTGAGTTTATCTACTGACATAATATCTCCAAGATAGATAATGAAACATATTAATTATATGAAAACAATATGACTTTGTTTTATCTTTTGTAAATAGAATATCAGTTTATCCAAACATGGTCTAGACCTACCATAAGCTTAGAAAGACTATCTTAACTCATTGAAATGAAATGGATTTTTGCAGTATGATTTTGATGGGAGGAAGGATTTGGTGAAATTTGTGAAAGCAGTGGCTGAGGCAGGTCTATATGTGCATCTCCGTATTGGTCCATATGTTTGTGCTGAATGGAACTACGGGTAAAGTTTTGTAATTTATGTGTATATTTTTCTGGGGTATTCATGTCTAATTGAGGGCTTTAACTTCTTGACAGTGGTTTCCCTCTTTGGCTTCACTTCATTCCAGGGATTAAGTTCCGAACTGACAATGAACCATTTAAGGTAAGGTAACCTTCACCCTAGTGTTTCATGCTTTTGTCCTTAAATCTGAGTTCACTTGCCAGGAAACTTTGTCTTCAGGCCGAAATGAAGCGATTCACCGCTAAGATTGTCGATCTCATGAAGCAAGAGAAACTGTATGCACCACAAGGAGGACCTATAATTTTATCTCAGGTTTTTTATCATTGAATACAAGTATAGTGAATATATTTTTCCAGATATTAAGGTCAAAGTTTATATTTGTTAATGTGAGAGTATTTGTGCTTTCTAATGCCAGATTGAAAATGAGTATGGAGACATCGATTCAGCCTATGGTTCTGCTGGTAAATCATACATCAATTGGGCAGCAAAAATGGCTACATCTCTTGATACAGGTGTTCCTTGGGTCATGTGTCAGCAAGAAGATGCTCCTGATCCAATCGTAAGTTTCATGTTTTGATATGTCTACGTTAATTGTTTTTTGGTTTATGGTTTACTAGGTTGCCTGTCTTCCAGAAAAGAGCAATCTTAGTATGCTGTCTGCATTCATCTTACTTGATTTTTACTTGAACTGCATGAAGATTAATACCTGCAATGGATTTTACTGCGATCAATTCACACCAAACTCTAAAACAAAGCCAAAAATGTGGACTGAAAATTGGAGTGCATGGTTAGCAACTTAGCATCCTTTTTTATATAAATAATTTAATCGAATTGTTTTTGTTATTTTCCAAATCTTACTTGAATTCTTTGGAATGGTAGGTATCTTTTATTTGGTGGTGGATTTCCTCACAGACCTGTGGAAGATCTCGCATTTGCTGTCGCACGCTTTTTCCAACGAGGCGGTACATTTCAAAATTACTATATGGTATTGCAACCTGAAACGTTGTTCACAAGTTCAATTTAATATGATAATATTACTTCACGGAAAAATTGGCTCTAAGAGGAATTAGCTGATACTGTATCATTTTTCATTGCTTGACTAAAAACAGTACCATGGAGGAACCAACTTTGACCGAAGTACTGGCGGACCATTCATTGCTACAAGTTATGATTTTGATGCCCCAATTGATGAGTATGGTATGTCCTTCAACCTTCATACTGAAATCTATTGTTCATGTTGTAGCCGTCACAAATGCAACACTGGTAATACATCAAAGAAGATAAATTAATAGTATCACATGCATAGTTTATTTCTTATATGAAGAATAGAAATTACGGACAATTTTGTACTTTTTAATTTCTTTGCTATATGCTGCAGGAATTATTAGGCAGCCGAAGTGGAGTCATCTTAAAGATTTGCACAAGGCCATAAAGCTTTGTGAAGAAGCATTAATAGCTACAGAACCCAAGATTACTTCTCTTGGTCCAAACCTAGAGGTATAGGTGGTTTATATTGAAATTTTTGTCGGTTTGAAACATCTTATTTCGCGTCTTAGGATAGAATATATTTTGTAACTAAAATTCATCTGGTTTGTCAATCTTGTAAGTTTCTTTCTCTGGAAAATTCCCTGGATTGAGTGCAATTTTGCCACAACCACTATTTTAGGCACTAACCAGATTAGGTCTTAACAGTCTTTTACTATTTAAACCGCAGGCGGCAATTTATAAGACAGGATCTGTATGTGCTGCCTTTCTCGCCAACGTGGACACTAAATCTGATAAAACTGTAAATTTCAGAGGCAATTCATATCACTTGCCTGCATGGTCTGTGAGCATCTTACCAGATTGCAAGAATGTAGTGCTTAATACTGCAAAGGTTTGTCTTGCCTTCATTTATATTAAGTTGCTTCAATAACTACGATTATCGCAATCAAAATAGATAGTTTAATTCAATAGAGTTGCTAAAAAGTGTGATTGTTATTCATTGTGTGATTAACCTATCTATAAACAGGGTGTTTTCTCTTATTTATTAGTCCAAAGTAAGTAGGATGTAATAAAAATAACATTTTTATTATGGCAGATTAATTCTGCATCTGTGATTTCAAACTTCGTAACTGAATCTTCAAAAGAAGATATCAGTTCTTTAGAAACTTCAAGTTCAAAATGGAGTTGGATAAAGGAACCTGTGGGTATTTCGAAGGATGATATATTTTCAAAAACTGGATTACTTGAGCAAATAAATATCACCGCTGATAGAAGTGACTACTTGTGGTACTCATTAAGGTACACGAGCCTCCACGTTCGAAAGATATTTGCCCTGATAGATGATTCTGTACTTCTTGATAACACTTCTATTGTATTCTTTTGAAGCGTTGATCTTAAGGATGATCCTGGTTCTCAAACTTTCCTTCACATTGAATCGCTCGGCCATGCCCTTCATGCCTTCGTAAATGGCAAGCTTGCAGGTAATTATTCACTAGGATTTTATGGTTTTCATATTTTGAAACTCAAATGAAGTCAAGGTTGATTTTAAAACACGTTAAAAATAAGAGTTGATCGTGGATTTTTTTTTCGAGGGATAGTTGATCATGGATGTTCCGTCCAAAAATGTTCATAATCTATTGTTTCAATTAAGTTCTTGAATTATTAAATAATAACTTTCTATGATATTATTGATGAATTCTTAGGGAGTCAAACCGGGAACAAAGACAAACCTAAGCTTAATGTGGACATCCCGATCACAGTACTTTCTGGAAAGAATAAAATTGATCTGCTGAGTTTAACAGTTGGACTTCAGGTTCAGCTTTTCTTGTTTTTAGTTTCCAATTATGCATAGAATAGCTTAGTCCTCCAATGATTTCTCTCATTACTATATCTAAGCTAACATGAATCATATGCACATCAGAACTATGGAGCTTTTTTTGACACATGGGGAGCGGGGATCACCGGTCCAGTGATATTGAAAGGTTTGAAGAATGGCAACAACACTCTTGATCTCTCCACTCGGAAGTGGACATACCAGGTCGGTCTTCACTTGTGATCGAAGACTATTTATTAGTCTTAATGAAGATACATTGTTAATGGAGTTAATTCTTTTGATACAGGTCGGCCTAAAAGGTGAAGATTTAGGTCTCTCTAGTGGAAATTCCGGAGGATGGAATTCACAGTCTACTTTCCCTAAGAACCAACCGTTGATTTGGTACAAGGTAATTTTATTTTCAATTTATTGTTTCCCTTGATATAAGTTATGGAATTTCAATAAAAAAGAATGCCGCTGTATGAAAAATGTTTTTTGCTACTAACCAATGACATACATGTTGCATTAGACAAACTTTGATGCTCCATCCGGCCGTAATCCAGTTGCGATTGACTTCACGGGGATGGGAAAAGGTGAGGCTTGGGTAAATGGACAAAGCATTGGGCGATACTGGCCTACATATGTTGCTTCAAATGCCGATTGCACAGACTCATGCAACTACAGAGGACCTTTTACTCAAACCAAATGTCACATGAATTGTGGAAAACCATCACAGACATTGTAAGTGTTGCAAATTTTCAATGAAAGAGTTTAAACATGAGAGAAAAATCTTGATCTATGATGTGACTGAGACATTAATCCCATCTCACAGATACCACGTGCCACGGTCGTTTTTGAAACCAAAAGGCAACACTCTTGTATTGTTTGAGGAAAATGGCGGAGATCCAACACAAATATCTTTTGCTACAAAACAGCTAAAAAGTGTGTGTGCACATGTATCTGATTCTCACCCACCTCAAATAGACTCGTGGAACCAAGATACAGAATCAGGGGGAAAGATAGGGCCTGAACTGTTGCTCAAGTGTCCTAATCATAATCAGGTAATCTCTTCCATCAAATTTGCAAGCTATGGAACACCACTAGGGGCGTGCGGAAACTTCTACCGCGGACGCTGCAGCAGCAATAAGGCGCTGTCAATTGTAAAGAAGGTGTTTATCTGGATTCCTGTTCCCTTGCTAATTTGTTTTGTTTCACTTTGGTTTAGATTAAGTATGTTGGGTATGGCTCATAGTTTACTGATATGTGAGTAGGTTGCTTGAGCTGGTGAGAATAATAGAAAATCAACTAATCAACTCATAGTATTTAAACACAAGCAGTAATATGTAACCACTTTGCAGCTGTAGACGTAGACACAATTGGCCGAACTCCACGATCAAATCTTGTTTTTTTTGTTTTTGTTGTTGTTGTTGGTTTTAAGCTGGTTAGCGGCGAAACTCACACACACACCTTGTTCTGAGAAGTGGAGAATTGTGGGTTCGAACCTGCGTTCCAACACATCAAATGTCCCTACAACATTTTACCACCTGAGTTATACTCACGGGACAATCGCTTGTGTTCTTTGTTTCTGTTTTTCATATATGTTTTCTTTTGAACCAGAGTTGTTGTAACATACTAAAATCATCTTATTAACAGGCCTGCATTGGATCAAGAAGTTGTAGTATTGGAGTATCAACTAATACATTTGGAGACCCTTGTAGAGGAGTGCCAAAGAGTTTAGCTGTTGAAGCTACTTGTGCATAG
Protein sequence

>MS.gene028734.t1

MKATTIVLVMLWFLPTMLCTNVDYDHRALVIDGKRRVLISGSIHYPRSTPQMWPDLIQKSKDGGLDVIETYVFWNLHEPVKGQYDFDGRKDLVKFVKAVAEAGLYVHLRIGPYVCAEWNYGGFPLWLHFIPGIKFRTDNEPFKAEMKRFTAKIVDLMKQEKLYAPQGGPIILSQIENEYGDIDSAYGSAGKSYINWAAKMATSLDTGVPWVMCQQEDAPDPIINTCNGFYCDQFTPNSKTKPKMWTENWSAWYLLFGGGFPHRPVEDLAFAVARFFQRGGTFQNYYMYHGGTNFDRSTGGPFIATSYDFDAPIDEYGIIRQPKWSHLKDLHKAIKLCEEALIATEPKITSLGPNLEAAIYKTGSVCAAFLANVDTKSDKTVNFRGNSYHLPAWSVSILPDCKNVVLNTAKINSASVISNFVTESSKEDISSLETSSSKWSWIKEPVGISKDDIFSKTGLLEQINITADRSDYLWYSLSVDLKDDPGSQTFLHIESLGHALHAFVNGKLAGSQTGNKDKPKLNVDIPITVLSGKNKIDLLSLTVGLQNYGAFFDTWGAGITGPVILKGLKNGNNTLDLSTRKWTYQVGLKGEDLGLSSGNSGGWNSQSTFPKNQPLIWYKTNFDAPSGRNPVAIDFTGMGKGEAWVNGQSIGRYWPTYVASNADCTDSCNYRGPFTQTKCHMNCGKPSQTLYHVPRSFLKPKGNTLVLFEENGGDPTQISFATKQLKSVCAHVSDSHPPQIDSWNQDTESGGKIGPELLLKCPNHNQVISSIKFASYGTPLGACGNFYRGRCSSNKALSIVKKACIGSRSCSIGVSTNTFGDPCRGVPKSLAVEATCA