AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene028766

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene028766.t1 MTR_2g093190 91.228 228 19 1 1 227 1 228 1.05e-154 428
MS.gene028766.t1 MTR_1g108510 89.035 228 24 1 1 227 1 228 3.29e-152 422
MS.gene028766.t1 MTR_3g030770 88.596 228 25 1 1 227 1 228 1.76e-150 417
MS.gene028766.t1 MTR_1g108580 87.281 228 28 1 1 227 1 228 2.99e-148 412
MS.gene028766.t1 MTR_1g105920 75.566 221 43 3 1 212 1 219 7.67e-114 325
MS.gene028766.t1 MTR_8g043650 73.160 231 51 3 1 222 1 229 1.61e-112 322
MS.gene028766.t1 MTR_1g105910 71.489 235 48 4 1 226 1 225 3.99e-112 321
MS.gene028766.t1 MTR_1g012570 72.851 221 49 3 1 212 1 219 6.42e-110 315
MS.gene028766.t1 MTR_2g030740 72.398 221 50 3 1 212 1 219 3.62e-109 313
MS.gene028766.t1 MTR_3g052920 70.136 221 55 3 1 212 1 219 1.54e-104 301
MS.gene028766.t1 MTR_0121s0080 66.383 235 60 4 1 226 1 225 6.52e-101 292
MS.gene028766.t1 MTR_1g075600 62.553 235 69 4 1 226 1 225 1.26e-95 279
MS.gene028766.t1 MTR_5g053390 62.979 235 68 4 1 226 1 225 4.54e-95 278
MS.gene028766.t1 MTR_1g077360 60.851 235 73 4 1 226 1 225 3.08e-94 276
MS.gene028766.t1 MTR_5g045560 62.128 235 70 4 1 226 1 225 2.00e-93 273
MS.gene028766.t1 MTR_1g105905 66.055 218 55 4 18 226 1 208 7.72e-93 271
MS.gene028766.t1 MTR_3g052870 67.136 213 56 3 1 212 1 200 5.58e-92 269
MS.gene028766.t1 MTR_2g085280 60.000 235 75 4 1 226 1 225 9.20e-91 267
MS.gene028766.t1 MTR_2g085250 60.793 227 78 3 1 218 1 225 1.50e-90 266
MS.gene028766.t1 MTR_5g055100 59.574 235 76 4 1 226 1 225 1.06e-89 264
MS.gene028766.t1 MTR_1g106070 73.077 182 40 2 1 173 1 182 3.90e-89 261
MS.gene028766.t1 MTR_7g062350 62.896 221 62 5 16 226 27 237 2.03e-84 251
MS.gene028766.t1 MTR_0121s0100 84.848 132 19 1 1 131 1 132 1.17e-74 222
MS.gene028766.t1 MTR_3g030780 73.016 126 33 1 1 125 1 126 1.45e-60 186
MS.gene028766.t1 MTR_3g080940 52.000 175 81 2 9 182 9 181 1.23e-57 181
MS.gene028766.t1 MTR_1g075570 58.046 174 50 3 18 182 1 160 1.31e-52 167
MS.gene028766.t1 MTR_8g086290 42.683 164 85 2 5 165 8 165 1.14e-38 132
MS.gene028766.t1 MTR_3g067910 62.136 103 38 1 21 122 2 104 4.75e-38 128
MS.gene028766.t1 MTR_2g105290 39.130 161 95 1 5 165 8 165 6.19e-35 122
MS.gene028766.t1 MTR_7g028448 41.447 152 78 3 22 173 25 165 1.83e-32 116
MS.gene028766.t1 MTR_4g036915 41.447 152 78 3 22 173 25 165 1.83e-32 116
MS.gene028766.t1 MTR_1g108500 58.036 112 25 2 8 117 94 185 3.38e-31 117
MS.gene028766.t1 MTR_4g127140 38.012 171 93 2 5 165 8 175 5.62e-26 100
MS.gene028766.t1 MTR_3g067875 78.571 56 12 0 18 73 1 56 3.81e-25 94.4
MS.gene028766.t1 MTR_1g063160 51.250 80 39 0 9 88 2 81 7.64e-24 94.4
MS.gene028766.t1 MTR_4g131030 40.517 116 53 2 9 108 2 117 5.52e-23 92.8
MS.gene028766.t1 MTR_8g079502 57.971 69 29 0 9 77 2 70 8.41e-23 91.7
MS.gene028766.t1 MTR_1g047550 57.971 69 29 0 9 77 2 70 1.00e-22 91.3
MS.gene028766.t1 MTR_1g054265 50.633 79 39 0 9 87 2 80 1.72e-22 90.5
MS.gene028766.t1 MTR_3g067915 50.000 94 46 1 33 125 3 96 3.06e-22 87.4
MS.gene028766.t1 MTR_4g094632 42.857 105 59 1 9 113 2 105 3.43e-22 89.4
MS.gene028766.t1 MTR_8g051580 56.522 69 30 0 9 77 2 70 1.77e-21 88.2
MS.gene028766.t1 MTR_8g046350 41.818 110 59 2 9 117 2 107 2.81e-21 87.0
MS.gene028766.t1 MTR_4g094638 42.453 106 59 1 9 112 2 107 5.38e-21 86.7
MS.gene028766.t1 MTR_3g067870 65.574 61 21 0 16 76 83 143 1.18e-20 85.1
MS.gene028766.t1 MTR_4g093970 33.939 165 84 5 10 159 29 183 9.10e-20 84.7
MS.gene028766.t1 MTR_8g022970 34.641 153 96 3 8 158 17 167 9.16e-19 80.9
MS.gene028766.t1 MTR_5g066180 50.000 68 34 0 9 76 2 69 1.12e-18 81.6
MS.gene028766.t1 MTR_3g005530 48.529 68 35 0 9 76 2 69 6.44e-18 79.7
MS.gene028766.t1 MTR_8g033270 46.835 79 40 1 9 85 2 80 7.15e-18 80.1
MS.gene028766.t1 MTR_5g032520 33.333 141 82 4 10 144 3 137 8.84e-18 79.3
MS.gene028766.t1 MTR_4g102530 50.746 67 33 0 10 76 3 69 1.60e-17 78.2
MS.gene028766.t1 MTR_8g033220 28.037 214 141 5 10 215 3 211 1.78e-17 78.6
MS.gene028766.t1 MTR_8g033220 28.037 214 141 5 10 215 3 211 2.01e-17 78.6
MS.gene028766.t1 MTR_0003s0590 50.000 68 34 0 9 76 2 69 2.76e-17 78.6
MS.gene028766.t1 MTR_3g452380 36.000 125 79 1 3 126 11 135 2.79e-17 78.2
MS.gene028766.t1 MTR_2g017865 32.278 158 102 3 9 162 17 173 2.89e-17 78.6
MS.gene028766.t1 MTR_3g102570 41.584 101 57 2 9 108 2 101 6.09e-17 78.6
MS.gene028766.t1 MTR_1g053070 48.529 68 35 0 9 76 2 69 6.34e-17 77.4
MS.gene028766.t1 MTR_5g032150 49.275 69 34 1 10 77 3 71 6.59e-17 77.0
MS.gene028766.t1 MTR_1g101970 50.000 68 34 0 9 76 2 69 6.65e-17 76.3
MS.gene028766.t1 MTR_2g009890 47.059 68 36 0 9 76 2 69 1.38e-16 77.0
MS.gene028766.t1 MTR_7g075870 49.254 67 34 0 10 76 3 69 2.13e-16 75.1
MS.gene028766.t1 MTR_4g109830 44.928 69 37 1 9 76 2 70 2.50e-16 75.5
MS.gene028766.t1 MTR_8g087860 34.746 118 76 1 9 125 18 135 2.79e-16 75.5
MS.gene028766.t1 MTR_5g031000 47.059 68 36 0 9 76 2 69 3.76e-16 74.7
MS.gene028766.t1 MTR_5g031000 47.059 68 36 0 9 76 2 69 4.14e-16 75.1
MS.gene028766.t1 MTR_6g464720 46.377 69 36 1 9 76 2 70 1.07e-15 73.9
MS.gene028766.t1 MTR_2g461710 53.571 56 26 0 9 64 2 57 1.40e-15 68.9
MS.gene028766.t1 MTR_7g075870 48.529 68 34 1 10 76 3 70 3.24e-15 72.0
MS.gene028766.t1 MTR_1g038300 30.488 164 96 6 9 159 2 160 4.87e-15 72.0
MS.gene028766.t1 MTR_6g015975 44.928 69 37 1 9 76 2 70 6.91e-15 72.0
MS.gene028766.t1 MTR_7g016600 44.928 69 37 1 9 76 2 70 8.95e-15 71.6
MS.gene028766.t1 MTR_8g066260 43.478 69 38 1 9 76 2 70 1.13e-14 71.2
MS.gene028766.t1 MTR_5g046790 50.000 56 28 0 9 64 2 57 1.24e-14 70.5
MS.gene028766.t1 MTR_3g109930 34.058 138 78 3 27 158 20 150 1.32e-14 69.7
MS.gene028766.t1 MTR_7g016630 42.029 69 39 1 9 76 2 70 1.54e-14 70.9
MS.gene028766.t1 MTR_5g046870 51.786 56 27 0 9 64 2 57 1.60e-14 67.8
MS.gene028766.t1 MTR_4g084740 43.590 78 43 1 9 85 2 79 1.96e-14 71.6
MS.gene028766.t1 MTR_3g084980 53.571 56 26 0 9 64 2 57 2.78e-14 70.1
MS.gene028766.t1 MTR_5g066960 47.368 57 30 0 9 65 2 58 3.18e-14 65.5
MS.gene028766.t1 MTR_4g109810 50.000 56 28 0 9 64 2 57 3.84e-14 69.7
MS.gene028766.t1 MTR_8g097090 51.786 56 27 0 9 64 2 57 4.79e-14 69.3
MS.gene028766.t1 MTR_1g029670 47.458 59 31 0 9 67 2 60 5.13e-14 68.2
MS.gene028766.t1 MTR_3g088615 33.333 102 47 2 9 89 2 103 5.85e-14 68.2
MS.gene028766.t1 MTR_4g036050 28.704 216 123 8 9 208 2 202 7.25e-14 68.2
MS.gene028766.t1 MTR_7g075850 53.571 56 26 0 9 64 2 57 1.14e-13 68.6
MS.gene028766.t1 MTR_3g113030 46.032 63 34 0 9 71 2 64 1.24e-13 68.2
MS.gene028766.t1 MTR_5g021270 47.143 70 35 1 9 76 2 71 1.99e-13 67.4
MS.gene028766.t1 MTR_5g021270 47.143 70 35 1 9 76 2 71 2.01e-13 67.4
MS.gene028766.t1 MTR_4g036050 28.230 209 117 9 10 208 3 188 2.12e-13 66.6
MS.gene028766.t1 MTR_4g036050 42.857 70 39 1 9 77 2 71 3.00e-13 66.2
MS.gene028766.t1 MTR_4g036050 43.478 69 38 1 10 77 3 71 3.14e-13 65.9
MS.gene028766.t1 MTR_1g041615 37.736 106 54 2 20 122 17 113 3.56e-13 64.7
MS.gene028766.t1 MTR_4g108720 38.636 88 50 2 9 92 2 89 5.97e-12 64.3
MS.gene028766.t1 MTR_4g093030 36.842 95 44 2 9 87 2 96 2.23e-11 60.5
MS.gene028766.t1 MTR_3g437790 29.630 135 93 2 26 158 30 164 4.33e-11 60.5
MS.gene028766.t1 MTR_4g051538 39.080 87 53 0 1 87 1 87 7.46e-11 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene028766.t1 AT5G60440 54.054 185 77 4 4 180 2 186 1.64e-56 182
MS.gene028766.t1 AT1G01530 47.568 185 86 5 4 182 2 181 2.89e-43 146
MS.gene028766.t1 AT2G24840 47.531 162 81 2 9 167 63 223 6.11e-42 143
MS.gene028766.t1 AT4G36590 43.275 171 88 3 4 166 2 171 2.50e-39 136
MS.gene028766.t1 AT1G65360 41.209 182 101 4 4 180 2 182 1.24e-38 134
MS.gene028766.t1 AT2G34440 42.857 112 64 0 9 120 2 113 1.15e-25 99.0
MS.gene028766.t1 AT3G66656 41.176 119 65 1 9 122 2 120 1.73e-23 93.2
MS.gene028766.t1 AT1G72350 32.258 186 87 5 9 187 43 196 3.74e-22 90.9
MS.gene028766.t1 AT3G04100 29.032 186 127 3 2 182 7 192 8.56e-22 89.7
MS.gene028766.t1 AT2G45660 34.356 163 88 5 10 161 3 157 5.98e-20 83.6
MS.gene028766.t1 AT4G09960 34.356 163 94 5 9 163 12 169 1.71e-19 84.3
MS.gene028766.t1 AT4G09960 34.356 163 94 5 9 163 3 160 1.72e-19 84.0
MS.gene028766.t1 AT4G09960 34.356 163 94 5 9 163 2 159 1.84e-19 84.0
MS.gene028766.t1 AT1G28460 31.579 171 107 5 5 168 4 171 2.38e-19 82.4
MS.gene028766.t1 AT4G09960 34.356 163 94 5 9 163 28 185 2.51e-19 84.0
MS.gene028766.t1 AT4G09960 39.344 122 67 3 9 126 2 120 2.83e-19 83.2
MS.gene028766.t1 AT2G45660 34.161 161 87 5 10 159 3 155 5.68e-19 82.4
MS.gene028766.t1 AT4G09960 39.344 122 67 3 9 126 97 215 1.22e-18 83.2
MS.gene028766.t1 AT4G24540 50.000 68 34 0 9 76 2 69 2.35e-18 80.9
MS.gene028766.t1 AT2G45650 50.000 68 34 0 9 76 2 69 2.49e-18 81.3
MS.gene028766.t1 AT1G29962 29.240 171 114 2 5 168 4 174 6.47e-18 79.0
MS.gene028766.t1 AT2G22540 50.746 67 33 0 10 76 3 69 1.02e-17 79.3
MS.gene028766.t1 AT2G22540 50.746 67 33 0 10 76 3 69 1.02e-17 79.3
MS.gene028766.t1 AT3G57230 45.588 68 37 0 9 76 2 69 1.09e-17 77.0
MS.gene028766.t1 AT5G13790 51.471 68 33 0 9 76 2 69 1.38e-17 79.7
MS.gene028766.t1 AT5G13790 51.471 68 33 0 9 76 2 69 1.44e-17 79.7
MS.gene028766.t1 AT4G18960 38.679 106 56 1 2 107 11 107 1.48e-17 79.3
MS.gene028766.t1 AT5G51870 52.239 67 32 0 10 76 3 69 2.65e-17 76.6
MS.gene028766.t1 AT3G57390 48.529 68 35 0 9 76 2 69 2.73e-17 78.2
MS.gene028766.t1 AT4G22950 50.746 67 33 0 10 76 3 69 3.40e-17 76.6
MS.gene028766.t1 AT5G51870 52.239 67 32 0 10 76 3 69 3.97e-17 77.0
MS.gene028766.t1 AT5G51870 50.000 72 36 0 5 76 21 92 4.92e-17 76.6
MS.gene028766.t1 AT5G51870 52.239 67 32 0 10 76 3 69 4.93e-17 77.0
MS.gene028766.t1 AT5G51870 52.239 67 32 0 10 76 13 79 5.55e-17 77.4
MS.gene028766.t1 AT5G62165 49.254 67 34 0 10 76 3 69 5.61e-17 74.3
MS.gene028766.t1 AT3G57390 48.529 68 35 0 9 76 2 69 5.76e-17 77.8
MS.gene028766.t1 AT5G10140 50.725 69 33 1 9 76 2 70 6.67e-17 75.5
MS.gene028766.t1 AT5G62165 49.254 67 34 0 10 76 3 69 7.15e-17 75.5
MS.gene028766.t1 AT5G62165 49.254 67 34 0 10 76 3 69 7.15e-17 75.5
MS.gene028766.t1 AT5G62165 49.254 67 34 0 10 76 3 69 7.15e-17 75.5
MS.gene028766.t1 AT3G57230 45.588 68 37 0 9 76 2 69 8.04e-17 77.0
MS.gene028766.t1 AT3G57230 45.588 68 37 0 9 76 2 69 8.04e-17 77.0
MS.gene028766.t1 AT4G37940 45.588 68 37 0 9 76 2 69 8.30e-17 76.6
MS.gene028766.t1 AT4G37940 45.588 68 37 0 9 76 2 69 8.97e-17 75.5
MS.gene028766.t1 AT2G42830 33.129 163 103 4 3 161 12 172 9.26e-17 77.0
MS.gene028766.t1 AT4G37940 45.588 68 37 0 9 76 2 69 9.75e-17 76.3
MS.gene028766.t1 AT5G10140 50.725 69 33 1 9 76 2 70 1.01e-16 75.5
MS.gene028766.t1 AT5G10140 50.725 69 33 1 9 76 2 70 1.14e-16 75.5
MS.gene028766.t1 AT4G22950 50.746 67 33 0 10 76 3 69 1.20e-16 76.3
MS.gene028766.t1 AT4G22950 50.746 67 33 0 10 76 3 69 1.20e-16 76.3
MS.gene028766.t1 AT2G42830 32.727 165 105 4 3 163 12 174 1.22e-16 76.6
MS.gene028766.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.37e-16 74.3
MS.gene028766.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.37e-16 74.3
MS.gene028766.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.37e-16 74.3
MS.gene028766.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.37e-16 74.3
MS.gene028766.t1 AT5G62165 49.254 67 34 0 10 76 3 69 1.37e-16 74.3
MS.gene028766.t1 AT5G10140 50.725 69 33 1 9 76 2 70 1.40e-16 75.5
MS.gene028766.t1 AT5G62165 49.254 67 34 0 10 76 3 69 2.07e-16 75.1
MS.gene028766.t1 AT5G62165 49.254 67 34 0 10 76 3 69 2.07e-16 75.1
MS.gene028766.t1 AT5G62165 49.254 67 34 0 10 76 3 69 2.09e-16 75.5
MS.gene028766.t1 AT5G62165 49.254 67 34 0 10 76 3 69 2.09e-16 75.5
MS.gene028766.t1 AT5G62165 49.254 67 34 0 10 76 3 69 2.09e-16 75.5
MS.gene028766.t1 AT5G51860 50.746 67 33 0 10 76 3 69 2.39e-16 75.1
MS.gene028766.t1 AT2G22540 58.182 55 23 0 10 64 3 57 2.66e-16 75.5
MS.gene028766.t1 AT5G51860 50.746 67 33 0 10 76 3 69 3.21e-16 74.7
MS.gene028766.t1 AT3G58780 47.297 74 38 1 3 76 12 84 3.54e-16 75.5
MS.gene028766.t1 AT3G61120 40.909 88 50 1 9 94 2 89 3.62e-16 75.5
MS.gene028766.t1 AT3G58780 47.297 74 38 1 3 76 18 90 4.22e-16 75.1
MS.gene028766.t1 AT3G30260 43.478 69 38 1 9 76 2 70 6.80e-16 74.7
MS.gene028766.t1 AT3G58780 47.297 74 38 1 3 76 12 84 7.51e-16 75.1
MS.gene028766.t1 AT4G11880 58.182 55 23 0 10 64 3 57 1.11e-15 72.8
MS.gene028766.t1 AT4G11880 58.182 55 23 0 10 64 3 57 1.11e-15 72.8
MS.gene028766.t1 AT2G14210 44.928 69 37 1 9 76 2 70 1.18e-15 73.6
MS.gene028766.t1 AT2G14210 44.928 69 37 1 9 76 2 70 1.41e-15 73.6
MS.gene028766.t1 AT1G69120 39.535 86 44 2 9 86 2 87 1.65e-15 73.2
MS.gene028766.t1 AT4G11880 57.143 56 24 0 10 65 3 58 1.82e-15 72.8
MS.gene028766.t1 AT4G11880 57.143 56 24 0 10 65 3 58 1.82e-15 72.8
MS.gene028766.t1 AT1G77980 48.611 72 36 1 9 79 2 73 3.19e-15 73.9
MS.gene028766.t1 AT5G65050 46.377 69 36 1 9 76 2 70 3.22e-15 71.2
MS.gene028766.t1 AT1G26310 44.928 69 37 1 9 76 2 70 3.28e-15 72.8
MS.gene028766.t1 AT1G77950 45.833 72 38 1 9 79 2 73 3.60e-15 72.8
MS.gene028766.t1 AT1G77950 45.833 72 38 1 9 79 2 73 3.60e-15 72.8
MS.gene028766.t1 AT1G77950 45.833 72 38 1 9 79 2 73 3.60e-15 72.8
MS.gene028766.t1 AT1G77950 45.833 72 38 1 9 79 2 73 3.60e-15 72.8
MS.gene028766.t1 AT1G69120 39.535 86 44 2 9 86 2 87 3.83e-15 72.8
MS.gene028766.t1 AT1G71692 46.377 69 36 1 10 77 3 71 4.41e-15 71.6
MS.gene028766.t1 AT1G22130 35.593 118 73 3 9 124 2 118 4.42e-15 73.6
MS.gene028766.t1 AT5G60910 44.928 69 37 1 9 76 2 70 4.86e-15 72.0
MS.gene028766.t1 AT3G54340 33.577 137 73 5 9 133 2 132 5.53e-15 72.0
MS.gene028766.t1 AT3G58780 51.562 64 30 1 3 66 12 74 5.80e-15 72.0
MS.gene028766.t1 AT5G20240 48.387 62 32 0 9 70 2 63 6.81e-15 69.7
MS.gene028766.t1 AT3G58780 51.562 64 30 1 3 66 12 74 8.36e-15 72.0
MS.gene028766.t1 AT5G20240 43.836 73 39 1 9 79 2 74 9.02e-15 70.9
MS.gene028766.t1 AT5G65050 46.377 69 36 1 9 76 2 70 9.03e-15 70.5
MS.gene028766.t1 AT5G65060 46.377 69 36 1 9 76 2 70 9.29e-15 70.5
MS.gene028766.t1 AT5G65050 46.377 69 36 1 9 76 2 70 9.37e-15 70.5
MS.gene028766.t1 AT5G65050 46.377 69 36 1 9 76 2 70 1.06e-14 70.1
MS.gene028766.t1 AT2G03710 53.571 56 26 0 9 64 2 57 1.26e-14 70.1
MS.gene028766.t1 AT5G65060 46.377 69 36 1 9 76 2 70 1.39e-14 69.7
MS.gene028766.t1 AT5G65060 46.377 69 36 1 9 76 2 70 1.48e-14 70.1
MS.gene028766.t1 AT1G28450 29.310 174 110 5 5 168 4 174 1.74e-14 69.7
MS.gene028766.t1 AT5G65070 40.580 69 40 1 9 76 2 70 2.03e-14 68.6
MS.gene028766.t1 AT5G15800 44.928 69 37 1 9 76 2 70 2.19e-14 70.5
MS.gene028766.t1 AT5G23260 55.000 60 27 0 5 64 14 73 2.65e-14 70.5
MS.gene028766.t1 AT1G24260 51.786 56 27 0 9 64 2 57 2.73e-14 70.1
MS.gene028766.t1 AT1G24260 51.786 56 27 0 9 64 2 57 2.76e-14 70.1
MS.gene028766.t1 AT1G24260 51.786 56 27 0 9 64 2 57 2.82e-14 70.1
MS.gene028766.t1 AT5G23260 55.000 60 27 0 5 64 14 73 2.97e-14 70.5
MS.gene028766.t1 AT3G02310 51.786 56 27 0 9 64 2 57 3.00e-14 69.3
MS.gene028766.t1 AT5G23260 57.143 56 24 0 9 64 2 57 3.15e-14 70.1
MS.gene028766.t1 AT5G23260 57.143 56 24 0 9 64 2 57 3.38e-14 69.7
MS.gene028766.t1 AT5G15800 44.928 69 37 1 9 76 2 70 3.76e-14 70.1
MS.gene028766.t1 AT5G65070 40.580 69 40 1 9 76 2 70 4.03e-14 68.9
MS.gene028766.t1 AT1G17310 32.934 167 73 4 8 170 47 178 4.11e-14 69.3
MS.gene028766.t1 AT1G17310 32.934 167 73 4 8 170 58 189 4.69e-14 69.3
MS.gene028766.t1 AT2G03710 53.571 56 26 0 9 64 2 57 5.04e-14 69.7
MS.gene028766.t1 AT2G03710 53.571 56 26 0 9 64 2 57 5.15e-14 69.7
MS.gene028766.t1 AT3G02310 51.786 56 27 0 9 64 2 57 8.04e-14 68.9
MS.gene028766.t1 AT5G65070 40.580 69 40 1 9 76 2 70 9.22e-14 68.6
MS.gene028766.t1 AT5G65070 40.580 69 40 1 9 76 2 70 1.13e-13 67.8
MS.gene028766.t1 AT2G22630 42.647 68 39 0 9 76 2 69 1.18e-13 68.2
MS.gene028766.t1 AT2G22630 42.647 68 39 0 9 76 2 69 1.18e-13 68.2
MS.gene028766.t1 AT5G65070 47.368 57 30 0 9 65 2 58 1.87e-13 67.8
MS.gene028766.t1 AT1G47760 40.299 67 40 0 9 75 2 68 4.41e-13 65.9
MS.gene028766.t1 AT5G49490 37.895 95 52 2 4 91 40 134 6.46e-13 67.0
MS.gene028766.t1 AT1G18750 40.000 75 43 1 9 81 2 76 7.67e-13 67.4
MS.gene028766.t1 AT1G18750 40.000 75 43 1 9 81 2 76 8.68e-13 67.0
MS.gene028766.t1 AT1G18750 40.000 75 43 1 9 81 2 76 8.72e-13 67.0
MS.gene028766.t1 AT5G65080 39.474 76 40 2 7 76 2 77 1.61e-12 64.3
MS.gene028766.t1 AT4G37435 48.214 56 29 0 9 64 2 57 2.34e-12 63.9
MS.gene028766.t1 AT5G65080 48.148 54 28 0 9 62 9 62 2.78e-12 63.9
MS.gene028766.t1 AT2G03060 31.373 153 86 6 9 147 2 149 8.43e-12 64.3
MS.gene028766.t1 AT2G03060 31.373 153 86 6 9 147 2 149 8.74e-12 64.3
MS.gene028766.t1 AT2G03060 31.373 153 86 6 9 147 2 149 8.74e-12 64.3
MS.gene028766.t1 AT2G03060 31.373 153 86 6 9 147 2 149 8.74e-12 64.3
MS.gene028766.t1 AT1G69540 33.028 109 66 2 9 116 2 104 2.48e-11 62.8
MS.gene028766.t1 AT1G69540 33.028 109 66 2 9 116 2 104 2.65e-11 62.8
MS.gene028766.t1 AT1G46408 43.836 73 37 2 10 78 5 77 6.75e-11 60.8

Find 47 sgRNAs with CRISPR-Local

Find 63 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTTGAGGATTTGGCTGATTA+TGG 0.267648 2.3:+8458638 None:intergenic
TTGCAGCCTCATTTGTTTGA+TGG 0.293834 2.3:-8458568 MS.gene028766:CDS
TGAATTGCATGGTGTCGTTT+TGG 0.309643 2.3:+8458944 None:intergenic
TCACCATGGCTTCAATAATA+TGG 0.324358 2.3:-8458533 MS.gene028766:CDS
TGGTGGGCTTGTCCAGTTGA+TGG 0.339908 2.3:-8458790 MS.gene028766:CDS
ATTTGAGTTTGTTGAGGATT+TGG 0.343942 2.3:+8458628 None:intergenic
TGAATTATTCAAGAAGGCTT+TGG 0.357802 2.3:-8458749 MS.gene028766:CDS
CTCATCACCAATCTTCTTCT+CGG 0.374331 2.3:+8458849 None:intergenic
GTTTATGACCGTATCAAGAT+TGG 0.394972 2.3:+8458990 None:intergenic
GCTTTGAGAAAGTCACTTGC+AGG 0.402119 2.3:+8459121 None:intergenic
GTCCAGTTGATGGGATGAAT+AGG 0.429804 2.3:-8458780 MS.gene028766:CDS
TCCCTATTCATCCCATCAAC+TGG 0.439721 2.3:+8458778 None:intergenic
TCCAGTTGATGGGATGAATA+GGG 0.440779 2.3:-8458779 MS.gene028766:CDS
AGTGAGCTTTGCACCCTTTG+TGG 0.441727 2.3:-8459072 MS.gene028766:CDS
ATGAAACGGAGGCTAAGTTT+TGG 0.455077 2.3:-8458810 MS.gene028766:CDS
GGTGGGCTTGTCCAGTTGAT+GGG 0.465063 2.3:-8458789 MS.gene028766:CDS
CTGGATGCCGAGAAGAAGAT+TGG 0.471167 2.3:-8458856 MS.gene028766:CDS
TGAGGCTGCAATTGCAACAT+AGG 0.486430 2.3:+8458580 None:intergenic
AGCAGCATCTGCACCACAAA+GGG 0.492573 2.3:+8459059 None:intergenic
TTTATGACCGTATCAAGATT+GGG 0.500413 2.3:+8458991 None:intergenic
ATTATTCAAGAAGGCTTTGG+AGG 0.515397 2.3:-8458746 MS.gene028766:CDS
GTGGGACGAGAGAAAGATAG+TGG 0.522741 2.3:+8458968 None:intergenic
CTTTCTCAAAGCGTCGTAGC+GGG 0.523572 2.3:-8459110 MS.gene028766:CDS
ACAAAGGGTGCAAAGCTCAC+TGG 0.525840 2.3:+8459074 None:intergenic
TGGTCATCCCAATCTTGATA+CGG 0.546833 2.3:-8458998 MS.gene028766:CDS
GAGCAATTTGAGCAATGAAA+CGG 0.548852 2.3:-8458824 MS.gene028766:CDS
TCAGCATGAATTATTCAAGA+AGG 0.549172 2.3:-8458755 MS.gene028766:CDS
ACACCATATTATTGAAGCCA+TGG 0.549763 2.3:+8458530 None:intergenic
GAGGCTGCAATTGCAACATA+GGG 0.578323 2.3:+8458581 None:intergenic
CTCGTTGTATTCTCACCTAG+TGG 0.580084 2.3:-8459036 MS.gene028766:CDS
ATCGATCCATCAAACAAATG+AGG 0.583681 2.3:+8458562 None:intergenic
GGAAACATTTGAGTTTGTTG+AGG 0.589185 2.3:+8458622 None:intergenic
ATCAAGATTGGGATGACCAA+AGG 0.590577 2.3:+8459002 None:intergenic
TTGAGAAAGTCACTTGCAGG+TGG 0.593625 2.3:+8459124 None:intergenic
ATTATGGAGATAAATGTTCG+AGG 0.608576 2.3:+8458654 None:intergenic
TGTATTCTCACCTAGTGGAA+AGG 0.611194 2.3:-8459031 MS.gene028766:CDS
AACTCAAATCAACAACACGC+TGG 0.622750 2.3:-8458875 MS.gene028766:CDS
GTTCACGCACGTTGGCATTG+CGG 0.623421 2.3:+8458911 None:intergenic
AAGGAAAATACCTTTCCACT+AGG 0.624124 2.3:+8459021 None:intergenic
GAGCAGCATCTGCACCACAA+AGG 0.629318 2.3:+8459058 None:intergenic
ATATTATTGAAGCCATGGTG+AGG 0.642989 2.3:+8458535 None:intergenic
CGACACCATGCAATTCATTG+AGG 0.645467 2.3:-8458938 MS.gene028766:CDS
ACTTTCTCAAAGCGTCGTAG+CGG 0.659133 2.3:-8459111 MS.gene028766:CDS
GTGAGCCTCAATGAATTGCA+TGG 0.661389 2.3:+8458933 None:intergenic
AGCATTGAGTTCACGCACGT+TGG 0.672189 2.3:+8458903 None:intergenic
CAATTTGAGCAATGAAACGG+AGG 0.680444 2.3:-8458821 MS.gene028766:CDS
GGATCGATGATGCCTCACCA+TGG 0.718921 2.3:-8458547 MS.gene028766:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATAGGGTTTTGAAAAATTTG+TGG + chr2.3:8459122-8459141 None:intergenic 25.0%
AACAAAAAATGGAAGAGTTC+GGG + chr2.3:8459030-8459049 None:intergenic 30.0%
ATTATGGAGATAAATGTTCG+AGG + chr2.3:8459066-8459085 None:intergenic 30.0%
CAACAAAAAATGGAAGAGTT+CGG + chr2.3:8459031-8459050 None:intergenic 30.0%
TCAGCATGAATTATTCAAGA+AGG - chr2.3:8458962-8458981 MS.gene028766:CDS 30.0%
TGAATTATTCAAGAAGGCTT+TGG - chr2.3:8458968-8458987 MS.gene028766:CDS 30.0%
TTTATGACCGTATCAAGATT+GGG + chr2.3:8458729-8458748 None:intergenic 30.0%
!! ATTTGAGTTTGTTGAGGATT+TGG + chr2.3:8459092-8459111 None:intergenic 30.0%
!! TCTTTTTCATCTCGATCTTT+TGG + chr2.3:8458560-8458579 None:intergenic 30.0%
AAGGAAAATACCTTTCCACT+AGG + chr2.3:8458699-8458718 None:intergenic 35.0%
ACACCATATTATTGAAGCCA+TGG + chr2.3:8459190-8459209 None:intergenic 35.0%
ATATTATTGAAGCCATGGTG+AGG + chr2.3:8459185-8459204 None:intergenic 35.0%
ATCGATCCATCAAACAAATG+AGG + chr2.3:8459158-8459177 None:intergenic 35.0%
GAGCAATTTGAGCAATGAAA+CGG - chr2.3:8458893-8458912 MS.gene028766:CDS 35.0%
GTTTATGACCGTATCAAGAT+TGG + chr2.3:8458730-8458749 None:intergenic 35.0%
TCACCATGGCTTCAATAATA+TGG - chr2.3:8459184-8459203 MS.gene028766:CDS 35.0%
! ATTATTCAAGAAGGCTTTGG+AGG - chr2.3:8458971-8458990 MS.gene028766:CDS 35.0%
!! GAAGCATTGCCAACAAAAAA+TGG + chr2.3:8459041-8459060 None:intergenic 35.0%
!! GGAAACATTTGAGTTTGTTG+AGG + chr2.3:8459098-8459117 None:intergenic 35.0%
!!! AGTGGAAAGGTATTTTCCTT+TGG - chr2.3:8458699-8458718 MS.gene028766:CDS 35.0%
!!! CGAACTCTTCCATTTTTTGT+TGG - chr2.3:8459029-8459048 MS.gene028766:CDS 35.0%
!!! GGGTTTTGAAAAATTTGTGG+TGG + chr2.3:8459119-8459138 None:intergenic 35.0%
AACTCAAATCAACAACACGC+TGG - chr2.3:8458842-8458861 MS.gene028766:CDS 40.0%
ATCAAGATTGGGATGACCAA+AGG + chr2.3:8458718-8458737 None:intergenic 40.0%
CAATTTGAGCAATGAAACGG+AGG - chr2.3:8458896-8458915 MS.gene028766:CDS 40.0%
CTCATCACCAATCTTCTTCT+CGG + chr2.3:8458871-8458890 None:intergenic 40.0%
GTTGAGGATTTGGCTGATTA+TGG + chr2.3:8459082-8459101 None:intergenic 40.0%
TGGTCATCCCAATCTTGATA+CGG - chr2.3:8458719-8458738 MS.gene028766:CDS 40.0%
TGTATTCTCACCTAGTGGAA+AGG - chr2.3:8458686-8458705 MS.gene028766:CDS 40.0%
TTGCAGCCTCATTTGTTTGA+TGG - chr2.3:8459149-8459168 MS.gene028766:CDS 40.0%
! ATGAAACGGAGGCTAAGTTT+TGG - chr2.3:8458907-8458926 MS.gene028766:CDS 40.0%
!! TCCAGTTGATGGGATGAATA+GGG - chr2.3:8458938-8458957 MS.gene028766:CDS 40.0%
!!! AATTGCATGGTGTCGTTTTG+GGG + chr2.3:8458774-8458793 None:intergenic 40.0%
!!! GAATTGCATGGTGTCGTTTT+GGG + chr2.3:8458775-8458794 None:intergenic 40.0%
!!! TGAATTGCATGGTGTCGTTT+TGG + chr2.3:8458776-8458795 None:intergenic 40.0%
CGACACCATGCAATTCATTG+AGG - chr2.3:8458779-8458798 MS.gene028766:CDS 45.0%
CTCGTTGTATTCTCACCTAG+TGG - chr2.3:8458681-8458700 MS.gene028766:CDS 45.0%
GAGGCTGCAATTGCAACATA+GGG + chr2.3:8459139-8459158 None:intergenic 45.0%
GTGAGCCTCAATGAATTGCA+TGG + chr2.3:8458787-8458806 None:intergenic 45.0%
TCCCTATTCATCCCATCAAC+TGG + chr2.3:8458942-8458961 None:intergenic 45.0%
TGAGGCTGCAATTGCAACAT+AGG + chr2.3:8459140-8459159 None:intergenic 45.0%
TTGAGAAAGTCACTTGCAGG+TGG + chr2.3:8458596-8458615 None:intergenic 45.0%
!! AAACGGAGGCTAAGTTTTGG+TGG - chr2.3:8458910-8458929 MS.gene028766:CDS 45.0%
!! AACGGAGGCTAAGTTTTGGT+GGG - chr2.3:8458911-8458930 MS.gene028766:CDS 45.0%
!! ACTTTCTCAAAGCGTCGTAG+CGG - chr2.3:8458606-8458625 MS.gene028766:CDS 45.0%
!! GCTTTGAGAAAGTCACTTGC+AGG + chr2.3:8458599-8458618 None:intergenic 45.0%
!! GTCCAGTTGATGGGATGAAT+AGG - chr2.3:8458937-8458956 MS.gene028766:CDS 45.0%
AGCAGCATCTGCACCACAAA+GGG + chr2.3:8458661-8458680 None:intergenic 50.0%
AGTGAGCTTTGCACCCTTTG+TGG - chr2.3:8458645-8458664 MS.gene028766:CDS 50.0%
CTGGATGCCGAGAAGAAGAT+TGG - chr2.3:8458861-8458880 MS.gene028766:CDS 50.0%
GTGGGACGAGAGAAAGATAG+TGG + chr2.3:8458752-8458771 None:intergenic 50.0%
TCGAGCGCAAAAAAATGCCG+AGG - chr2.3:8458531-8458550 MS.gene028766:CDS 50.0%
! ACAAAGGGTGCAAAGCTCAC+TGG + chr2.3:8458646-8458665 None:intergenic 50.0%
! AGCATTGAGTTCACGCACGT+TGG + chr2.3:8458817-8458836 None:intergenic 50.0%
! TCTCGATCTTTTGGCGACCT+CGG + chr2.3:8458551-8458570 None:intergenic 50.0%
!! CTTTCTCAAAGCGTCGTAGC+GGG - chr2.3:8458607-8458626 MS.gene028766:CDS 50.0%
GAGCAGCATCTGCACCACAA+AGG + chr2.3:8458662-8458681 None:intergenic 55.0%
GGATCGATGATGCCTCACCA+TGG - chr2.3:8459170-8459189 MS.gene028766:CDS 55.0%
GTTCACGCACGTTGGCATTG+CGG + chr2.3:8458809-8458828 None:intergenic 55.0%
! GGTGGGCTTGTCCAGTTGAT+GGG - chr2.3:8458928-8458947 MS.gene028766:CDS 55.0%
!! TGGTGGGCTTGTCCAGTTGA+TGG - chr2.3:8458927-8458946 MS.gene028766:CDS 55.0%
!!! GCATGGTGTCGTTTTGGGGT+GGG + chr2.3:8458770-8458789 None:intergenic 55.0%
!!! TGCATGGTGTCGTTTTGGGG+TGG + chr2.3:8458771-8458790 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr2.3 gene 8458528 8459211 8458528 ID=MS.gene028766
chr2.3 mRNA 8458528 8459211 8458528 ID=MS.gene028766.t1;Parent=MS.gene028766
chr2.3 exon 8458528 8459211 8458528 ID=MS.gene028766.t1.exon1;Parent=MS.gene028766.t1
chr2.3 CDS 8458528 8459211 8458528 ID=cds.MS.gene028766.t1;Parent=MS.gene028766.t1
Gene Sequence

>MS.gene028766

ATGTCGAGCGCAAAAAAATGCCGAGGTCGCCAAAAGATCGAGATGAAAAAGATGAGCAACGAGAGCCACCTGCAAGTGACTTTCTCAAAGCGTCGTAGCGGGCTCTTCAAGAAAGCCAGTGAGCTTTGCACCCTTTGTGGTGCAGATGCTGCTCTCGTTGTATTCTCACCTAGTGGAAAGGTATTTTCCTTTGGTCATCCCAATCTTGATACGGTCATAAACCACTATCTTTCTCTCGTCCCACCCCAAAACGACACCATGCAATTCATTGAGGCTCACCGCAATGCCAACGTGCGTGAACTCAATGCTCAACTAACTCAAATCAACAACACGCTGGATGCCGAGAAGAAGATTGGTGATGAGCTGAGCAATTTGAGCAATGAAACGGAGGCTAAGTTTTGGTGGGCTTGTCCAGTTGATGGGATGAATAGGGATCAGCATGAATTATTCAAGAAGGCTTTGGAGGAGCTTAAGAAACTTGTAATTCAGCATGCTGCTACCCGAACTCTTCCATTTTTTGTTGGCAATGCTTCATCCTCGAACATTTATCTCCATAATCAGCCAAATCCTCAACAAACTCAAATGTTTCCACCACAAATTTTTCAAAACCCTATGTTGCAATTGCAGCCTCATTTGTTTGATGGATCGATGATGCCTCACCATGGCTTCAATAATATGGTGTAA
Protein sequence

>MS.gene028766.t1

MSSAKKCRGRQKIEMKKMSNESHLQVTFSKRRSGLFKKASELCTLCGADAALVVFSPSGKVFSFGHPNLDTVINHYLSLVPPQNDTMQFIEAHRNANVRELNAQLTQINNTLDAEKKIGDELSNLSNETEAKFWWACPVDGMNRDQHELFKKALEELKKLVIQHAATRTLPFFVGNASSSNIYLHNQPNPQQTQMFPPQIFQNPMLQLQPHLFDGSMMPHHGFNNMV