Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029065.t1 | XP_003592793.1 | 99.5 | 634 | 3 | 0 | 1 | 634 | 102 | 735 | 0.00E+00 | 1290.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029065.t1 | Q7SIC9 | 88.6 | 631 | 72 | 0 | 1 | 631 | 43 | 673 | 0.0e+00 | 1164.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029065.t1 | G7IF28 | 99.5 | 634 | 3 | 0 | 1 | 634 | 102 | 735 | 0.0e+00 | 1290.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene029065 | MS.gene55762 | PPI |
| MS.gene06030 | MS.gene029065 | PPI |
| MS.gene048888 | MS.gene029065 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029065.t1 | MTR_5g059410 | 99.527 | 634 | 3 | 0 | 1 | 634 | 102 | 735 | 0.0 | 1318 |
| MS.gene029065.t1 | MTR_1g116120 | 99.527 | 634 | 3 | 0 | 1 | 634 | 102 | 735 | 0.0 | 1318 |
| MS.gene029065.t1 | MTR_4g024630 | 88.784 | 633 | 71 | 0 | 1 | 633 | 102 | 734 | 0.0 | 1184 |
| MS.gene029065.t1 | MTR_4g024630 | 88.235 | 578 | 68 | 0 | 56 | 633 | 3 | 580 | 0.0 | 1065 |
| MS.gene029065.t1 | MTR_0776s0010 | 51.975 | 633 | 289 | 9 | 1 | 624 | 955 | 1581 | 0.0 | 598 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029065.t1 | AT2G45290 | 86.730 | 633 | 84 | 0 | 1 | 633 | 108 | 740 | 0.0 | 1177 |
| MS.gene029065.t1 | AT2G45290 | 86.730 | 633 | 84 | 0 | 1 | 633 | 108 | 740 | 0.0 | 1177 |
| MS.gene029065.t1 | AT3G60750 | 88.114 | 631 | 75 | 0 | 1 | 631 | 108 | 738 | 0.0 | 1176 |
| MS.gene029065.t1 | AT3G60750 | 87.956 | 631 | 75 | 1 | 1 | 631 | 108 | 737 | 0.0 | 1169 |
Find 176 sgRNAs with CRISPR-Local
Find 249 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACAGCCTTTGCTTCCTTAA+TGG | 0.175474 | 1.1:-81738059 | None:intergenic |
| AAGGTTCTTCCTGGTCTTAT+TGG | 0.215510 | 1.1:+81738948 | MS.gene029065:CDS |
| AATCGAACATTGCGCTCTTC+TGG | 0.242416 | 1.1:-81739041 | None:intergenic |
| TTAAACCAAGAAGGATTCTT+TGG | 0.258486 | 1.1:-81736755 | None:intergenic |
| AGACAAACCTACTTTGATTA+AGG | 0.266496 | 1.1:+81738084 | MS.gene029065:CDS |
| TATGCTCTTCTTCATCTTGC+TGG | 0.269634 | 1.1:+81736824 | MS.gene029065:CDS |
| GTAGCATCAGCAGGGGTTTC+CGG | 0.275225 | 1.1:-81738888 | None:intergenic |
| ACCATTGGCATTGATCGATT+TGG | 0.287349 | 1.1:+81739731 | MS.gene029065:CDS |
| CTTGCCGGACATTGGGGTCT+TGG | 0.291105 | 1.1:+81737881 | MS.gene029065:CDS |
| CACTTGGATGGCATGTGATT+TGG | 0.296401 | 1.1:+81737996 | MS.gene029065:CDS |
| GCAAAAGTTGCCTAACCTTC+CGG | 0.305640 | 1.1:+81739406 | MS.gene029065:CDS |
| CCTCAATTCTTGCCCTTTCT+CGG | 0.314282 | 1.1:+81739384 | MS.gene029065:CDS |
| ATAACCCAAAGAATCCTTCT+TGG | 0.318239 | 1.1:+81736750 | MS.gene029065:CDS |
| GCTCTTCTGGAGTAGCCTTT+TGG | 0.321780 | 1.1:-81739028 | None:intergenic |
| ATGACTTTGTTGAAATCGTT+TGG | 0.325235 | 1.1:+81738999 | MS.gene029065:CDS |
| GTGTTCACTTGCCGGACATT+GGG | 0.326670 | 1.1:+81737874 | MS.gene029065:CDS |
| ACAGATCTATGAAACTTCTT+TGG | 0.327073 | 1.1:-81739822 | None:intergenic |
| CTGCCGCCGCTGATGATCTA+AGG | 0.331163 | 1.1:+81739540 | MS.gene029065:CDS |
| AATGAAGCGTGTTCACTTGC+CGG | 0.335597 | 1.1:+81737866 | MS.gene029065:CDS |
| TGAAATTCGTGCAGCCATTA+AGG | 0.339511 | 1.1:+81738045 | MS.gene029065:CDS |
| TTGTTTAGGTCCTCTGGGTC+AGG | 0.341996 | 1.1:+81737586 | MS.gene029065:intron |
| GCTTCGAGTGCAGCACCCTC+AGG | 0.351157 | 1.1:-81738563 | None:intergenic |
| CTGTAGGAATTAGCTTTGTT+TGG | 0.355528 | 1.1:-81738340 | None:intergenic |
| GTTACCACTACCATTGGATT+TGG | 0.357397 | 1.1:+81738313 | MS.gene029065:CDS |
| GCCCTGGCCAAGGTTCTTCC+TGG | 0.357791 | 1.1:+81738939 | MS.gene029065:CDS |
| CAAGAATTGAGGGTCTCTTC+TGG | 0.372757 | 1.1:-81739373 | None:intergenic |
| CAAAAGTTGCCTAACCTTCC+GGG | 0.374567 | 1.1:+81739407 | MS.gene029065:CDS |
| TGCTCTAGGTATGTTATATT+AGG | 0.377773 | 1.1:+81737815 | MS.gene029065:intron |
| GCAATGTTCGATTTGGTGTC+AGG | 0.378142 | 1.1:+81739051 | MS.gene029065:CDS |
| AAGCTTGCCAGGTGCTCTAT+TGG | 0.380074 | 1.1:-81739269 | None:intergenic |
| ACCCATGGGTTGTGCTCCAA+TGG | 0.386484 | 1.1:+81736697 | None:intergenic |
| GCATTGCTCGGAAGCTTGCC+AGG | 0.387618 | 1.1:-81739280 | None:intergenic |
| TTCTATTGAAGGTGTTGAAA+AGG | 0.389406 | 1.1:+81739433 | MS.gene029065:CDS |
| ACAAAGAAAGTTGCACAGTA+TGG | 0.395938 | 1.1:-81739131 | None:intergenic |
| TCGTGAATTACCTGCTGATT+GGG | 0.402483 | 1.1:+81738661 | MS.gene029065:CDS |
| ATTGAGGCGGGATCAACATT+TGG | 0.403681 | 1.1:+81739677 | MS.gene029065:CDS |
| CCGTGCAGCCAAGTGCTTCT+CGG | 0.404020 | 1.1:-81737639 | None:intergenic |
| GAAGAGCGCAATGTTCGATT+TGG | 0.405488 | 1.1:+81739044 | MS.gene029065:CDS |
| ACTTGGATGGCATGTGATTT+GGG | 0.407932 | 1.1:+81737997 | MS.gene029065:CDS |
| ATCGTGAATTACCTGCTGAT+TGG | 0.408577 | 1.1:+81738660 | MS.gene029065:CDS |
| GGGAAAATATACAAGGAGTA+TGG | 0.412527 | 1.1:+81739770 | MS.gene029065:CDS |
| CGTGTTCACTTGCCGGACAT+TGG | 0.412603 | 1.1:+81737873 | MS.gene029065:CDS |
| CAGGGTATTGCCAATGGTGT+TGG | 0.421847 | 1.1:+81737605 | MS.gene029065:CDS |
| CAGTGTTCACGGAGCTGCAT+TGG | 0.425068 | 1.1:+81738360 | MS.gene029065:CDS |
| GTTATGACCCATGATTCAAT+TGG | 0.427272 | 1.1:+81739218 | MS.gene029065:CDS |
| TAAACCAAGAAGGATTCTTT+GGG | 0.427395 | 1.1:-81736754 | None:intergenic |
| CTTGAAGCAGTTTCGACAAT+GGG | 0.430255 | 1.1:+81737396 | MS.gene029065:CDS |
| CCCGAGAACTTCGAGACATA+TGG | 0.433908 | 1.1:+81737439 | MS.gene029065:CDS |
| TTTGGTTGGCATAAGATTGT+TGG | 0.433955 | 1.1:+81739695 | MS.gene029065:CDS |
| TGATTGGGAGAAAGCACTTC+CGG | 0.439162 | 1.1:+81738676 | MS.gene029065:CDS |
| AGCAGAAATAACAGCTTCCT+TGG | 0.441956 | 1.1:-81739798 | None:intergenic |
| ATTAGGAGATGGTTGTCAAA+TGG | 0.442289 | 1.1:+81737832 | MS.gene029065:CDS |
| GGACGAAGCATCAAAACATT+TGG | 0.442772 | 1.1:-81739302 | None:intergenic |
| CTCCAAGTCCAATTGAATCA+TGG | 0.443401 | 1.1:-81739226 | None:intergenic |
| AGTGTTCACGGAGCTGCATT+GGG | 0.447236 | 1.1:+81738361 | MS.gene029065:CDS |
| ATAGAAGTTCCCGGAAGGTT+AGG | 0.449217 | 1.1:-81739416 | None:intergenic |
| ACTCTAGCTGTCACAGAAGC+AGG | 0.449310 | 1.1:-81739650 | None:intergenic |
| GGCACATGGAAAGGCTCATA+TGG | 0.449701 | 1.1:-81738424 | None:intergenic |
| GACCAGGAAGAACCTTGGCC+AGG | 0.451334 | 1.1:-81738941 | None:intergenic |
| ACACAAGGCAGAAATCCTTA+TGG | 0.451743 | 1.1:-81739177 | None:intergenic |
| CCGAGAAAGGGCAAGAATTG+AGG | 0.453215 | 1.1:-81739384 | None:intergenic |
| AGATTTCTTGTAGCATCAGC+AGG | 0.453550 | 1.1:-81738897 | None:intergenic |
| CCCATGGGTTGTGCTCCAAT+GGG | 0.456524 | 1.1:+81736698 | None:intergenic |
| ACCCATGATTCAATTGGACT+TGG | 0.457470 | 1.1:+81739224 | MS.gene029065:CDS |
| TGCTCTATTGGCTGATGAGT+TGG | 0.458639 | 1.1:-81739257 | None:intergenic |
| ACACCTTCAATAGAAGTTCC+CGG | 0.462136 | 1.1:-81739425 | None:intergenic |
| GATGCTACAAGGCAGAATCT+TGG | 0.465252 | 1.1:+81738397 | MS.gene029065:CDS |
| CTTCCGGGAACTTCTATTGA+AGG | 0.465653 | 1.1:+81739422 | MS.gene029065:CDS |
| CACAGTATGGAATGAATCCC+GGG | 0.466716 | 1.1:-81739118 | None:intergenic |
| TCCATATGTCTCGAAGTTCT+CGG | 0.472304 | 1.1:-81737440 | None:intergenic |
| ACCTGATGAGTTGTCTGAAA+TGG | 0.472367 | 1.1:-81739465 | None:intergenic |
| TGGGTAAAGAACGGAAATAC+TGG | 0.473280 | 1.1:+81738016 | MS.gene029065:CDS |
| GATAATCACATATCTATTGA+TGG | 0.473309 | 1.1:+81737926 | MS.gene029065:CDS |
| GTTCTTCCTGGTCTTATTGG+TGG | 0.473340 | 1.1:+81738951 | MS.gene029065:CDS |
| CAACAAAGTCATGTTGGAAG+AGG | 0.473739 | 1.1:-81738988 | None:intergenic |
| TAGATCATCAGCGGCGGCAG+CGG | 0.475603 | 1.1:-81739537 | None:intergenic |
| GCAGTTTCATTACCATCAGC+TGG | 0.477799 | 1.1:-81739323 | None:intergenic |
| TCTATTGAAGGTGTTGAAAA+GGG | 0.479009 | 1.1:+81739434 | MS.gene029065:CDS |
| CGAGAAAGGGCAAGAATTGA+GGG | 0.481642 | 1.1:-81739383 | None:intergenic |
| CCGAGAAGCACTTGGCTGCA+CGG | 0.482213 | 1.1:+81737639 | MS.gene029065:CDS |
| TCAATTGGACTTGGAGAGGA+TGG | 0.485462 | 1.1:+81739233 | MS.gene029065:CDS |
| GCTAATTCCTACAGTGTTCA+CGG | 0.486135 | 1.1:+81738349 | MS.gene029065:CDS |
| GTGCAGCACCCTCAGGGGTA+TGG | 0.486259 | 1.1:-81738556 | None:intergenic |
| ATTGGTTATCTCACGTGTAA+TGG | 0.488265 | 1.1:-81737691 | None:intergenic |
| ATTTCTGCCTTGTGTGAAGC+CGG | 0.489758 | 1.1:+81739185 | MS.gene029065:CDS |
| AGAGGAGGCTGCAGAGCTAA+AGG | 0.490701 | 1.1:+81738628 | MS.gene029065:CDS |
| CCATATGTCTCGAAGTTCTC+GGG | 0.492717 | 1.1:-81737439 | None:intergenic |
| TCGAAGTTCTCGGGATGTCC+AGG | 0.493290 | 1.1:-81737430 | None:intergenic |
| TCACTAACCTTAATCAAAGT+AGG | 0.493636 | 1.1:-81738091 | None:intergenic |
| TTTCGTTGTTTAGGTCCTCT+GGG | 0.495503 | 1.1:+81737581 | MS.gene029065:intron |
| TGACAGGTTACCACTACCAT+TGG | 0.495504 | 1.1:+81738307 | MS.gene029065:intron |
| TGGTATTGCTCTTCATAGCC+CGG | 0.502685 | 1.1:+81739100 | MS.gene029065:CDS |
| TGTTTAGGTCCTCTGGGTCA+GGG | 0.504143 | 1.1:+81737587 | MS.gene029065:intron |
| TGGTCAACAATCTCACTGTC+AGG | 0.504469 | 1.1:-81737671 | None:intergenic |
| ACATCTTCTGGCACATGGAA+AGG | 0.505808 | 1.1:-81738433 | None:intergenic |
| GTTCCAATCAAAATAACATC+AGG | 0.510531 | 1.1:-81739494 | None:intergenic |
| TCCAAGTCCAATTGAATCAT+GGG | 0.511215 | 1.1:-81739225 | None:intergenic |
| GGCACTTGCCGAGAAGCACT+TGG | 0.512393 | 1.1:+81737631 | MS.gene029065:CDS |
| CTTTCCAAGACCCCAATGTC+CGG | 0.512394 | 1.1:-81737885 | None:intergenic |
| CATAAGATTGTTGGAAGCAA+GGG | 0.513540 | 1.1:+81739704 | MS.gene029065:CDS |
| ACCATTTCAGACAACTCATC+AGG | 0.514190 | 1.1:+81739464 | MS.gene029065:CDS |
| GATTGGAACTGGTTCTGAGT+TGG | 0.514884 | 1.1:+81739508 | MS.gene029065:CDS |
| AGGCGGGATCAACATTTGGT+TGG | 0.515586 | 1.1:+81739681 | MS.gene029065:CDS |
| TTTGGAGCAAGTGCTCCAGC+AGG | 0.522166 | 1.1:+81739749 | MS.gene029065:CDS |
| TCAAAACATTTGGCATTGCT+CGG | 0.524118 | 1.1:-81739292 | None:intergenic |
| CGATTTCAACAAAGTCATGT+TGG | 0.524839 | 1.1:-81738994 | None:intergenic |
| CTGGGTCAGGGTATTGCCAA+TGG | 0.525385 | 1.1:+81737599 | MS.gene029065:CDS |
| TGGTGTCAGGGAACACGCAA+TGG | 0.526615 | 1.1:+81739064 | MS.gene029065:CDS |
| ATCGTTTGGAGATTTCCAAA+AGG | 0.533264 | 1.1:+81739013 | MS.gene029065:CDS |
| CTTCGAGTGCAGCACCCTCA+GGG | 0.535328 | 1.1:-81738562 | None:intergenic |
| GGTATTGCTCTTCATAGCCC+GGG | 0.537364 | 1.1:+81739101 | MS.gene029065:CDS |
| GCACAGTATGGAATGAATCC+CGG | 0.542998 | 1.1:-81739119 | None:intergenic |
| ACTACATGAGAGCTGCCATA+AGG | 0.547176 | 1.1:+81739162 | MS.gene029065:CDS |
| GCATAAGATTGTTGGAAGCA+AGG | 0.550996 | 1.1:+81739703 | MS.gene029065:CDS |
| TTCTTTCCTTAGATCATCAG+CGG | 0.551042 | 1.1:-81739546 | None:intergenic |
| TATTGCCAATGGTGTTGGAT+TGG | 0.553474 | 1.1:+81737610 | MS.gene029065:CDS |
| ACCCATTGGAGCACAACCCA+TGG | 0.554735 | 1.1:-81736699 | None:intergenic |
| CAATGGGGAAGCAAAACTCC+TGG | 0.558532 | 1.1:+81737412 | MS.gene029065:CDS |
| ACCAGGAAGAACCTTGGCCA+GGG | 0.559298 | 1.1:-81738940 | None:intergenic |
| GGTGTCAGGGAACACGCAAT+GGG | 0.559362 | 1.1:+81739065 | MS.gene029065:CDS |
| TTGATGCTTCGTCCAGCTGA+TGG | 0.563709 | 1.1:+81739311 | MS.gene029065:CDS |
| CTAAAGAAGTAGATGCTACA+AGG | 0.563711 | 1.1:+81738386 | MS.gene029065:CDS |
| AGTGCTTTCTCCCAATCAGC+AGG | 0.564870 | 1.1:-81738671 | None:intergenic |
| GCTAGAGTCAGCATTGAGGC+GGG | 0.565493 | 1.1:+81739665 | MS.gene029065:CDS |
| GCTGATGATCTAAGGAAAGA+AGG | 0.567319 | 1.1:+81739548 | MS.gene029065:CDS |
| CGATCACGATTAAACCAAGA+AGG | 0.567796 | 1.1:-81736764 | None:intergenic |
| AGGTATGTTATATTAGGAGA+TGG | 0.568803 | 1.1:+81737821 | MS.gene029065:intron |
| AAATCTAAATGCCCTGGCCA+AGG | 0.569724 | 1.1:+81738929 | MS.gene029065:CDS |
| TCGTATAGAATGTGACCCAT+TGG | 0.570278 | 1.1:-81736713 | None:intergenic |
| ACAGCAAAATCTAAATGCCC+TGG | 0.570304 | 1.1:+81738923 | MS.gene029065:CDS |
| AGAACCAAATCCAATGGTAG+TGG | 0.571113 | 1.1:-81738317 | None:intergenic |
| TGATCAGTCAGATGAATACA+AGG | 0.572341 | 1.1:+81739616 | MS.gene029065:CDS |
| TCATCAGCCAATAGAGCACC+TGG | 0.576120 | 1.1:+81739262 | MS.gene029065:CDS |
| CAATGTTCGATTTGGTGTCA+GGG | 0.577817 | 1.1:+81739052 | MS.gene029065:CDS |
| GGAGATGGTTGTCAAATGGA+AGG | 0.581318 | 1.1:+81737836 | MS.gene029065:CDS |
| GCTGATGGTAATGAAACTGC+TGG | 0.585057 | 1.1:+81739326 | MS.gene029065:CDS |
| GTTTGGAGAACCAAATCCAA+TGG | 0.585421 | 1.1:-81738323 | None:intergenic |
| TGGAGTCGCCATACCCCTGA+GGG | 0.588668 | 1.1:+81738548 | MS.gene029065:CDS |
| AGCTAGAGTCAGCATTGAGG+CGG | 0.588951 | 1.1:+81739664 | MS.gene029065:CDS |
| ACTTGAAGCAGTTTCGACAA+TGG | 0.594500 | 1.1:+81737395 | MS.gene029065:CDS |
| CTCTAGCTGTCACAGAAGCA+GGG | 0.598577 | 1.1:-81739649 | None:intergenic |
| GGTCATAACATAAATAACTC+CGG | 0.599500 | 1.1:-81739204 | None:intergenic |
| TGCAGCCATTAAGGAAGCAA+AGG | 0.600893 | 1.1:+81738054 | MS.gene029065:CDS |
| TGATTCAATTGGACTTGGAG+AGG | 0.602455 | 1.1:+81739229 | MS.gene029065:CDS |
| TGTTCACTTGCCGGACATTG+GGG | 0.608345 | 1.1:+81737875 | MS.gene029065:CDS |
| TATGGCAGCTCTCATGTAGT+CGG | 0.609330 | 1.1:-81739159 | None:intergenic |
| AAGTGCCAATCCAACACCAT+TGG | 0.610021 | 1.1:-81737615 | None:intergenic |
| TCCAAATCGATCAATGCCAA+TGG | 0.610681 | 1.1:-81739732 | None:intergenic |
| CAACTTTCAGACTTACACTC+CGG | 0.611225 | 1.1:+81738869 | MS.gene029065:intron |
| CCCATTGGAGCACAACCCAT+GGG | 0.612164 | 1.1:-81736698 | None:intergenic |
| ATTGAAGGTGTTGAAAAGGG+TGG | 0.614729 | 1.1:+81739437 | MS.gene029065:CDS |
| GATTTCTTGTAGCATCAGCA+GGG | 0.614806 | 1.1:-81738896 | None:intergenic |
| AATAAGACCAGGAAGAACCT+TGG | 0.616495 | 1.1:-81738946 | None:intergenic |
| AATAACTCCGGCTTCACACA+AGG | 0.617620 | 1.1:-81739192 | None:intergenic |
| CTACAAGGCAGAATCTTGGA+TGG | 0.619439 | 1.1:+81738401 | MS.gene029065:CDS |
| GGGTCTCTTCTGGTTAAGCA+CGG | 0.620082 | 1.1:-81739363 | None:intergenic |
| TCCAGCAGGGAAAATATACA+AGG | 0.623690 | 1.1:+81739763 | MS.gene029065:CDS |
| CATGTGATTTGGGTAAAGAA+CGG | 0.627359 | 1.1:+81738007 | MS.gene029065:CDS |
| TGAGAAGAAATACAAAGAGG+AGG | 0.628944 | 1.1:+81738613 | MS.gene029065:CDS |
| TGCTGGTTATGACAGTGTCA+AGG | 0.631432 | 1.1:+81736841 | MS.gene029065:CDS |
| TGCAGCTCCGTGAACACTGT+AGG | 0.641746 | 1.1:-81738356 | None:intergenic |
| TATGGAATTGAAGTCACCAC+AGG | 0.643063 | 1.1:+81737457 | MS.gene029065:CDS |
| GTGCTGCACTCGAAGCTGAG+TGG | 0.649503 | 1.1:+81738570 | MS.gene029065:CDS |
| TTGGAGTCGCCATACCCCTG+AGG | 0.652993 | 1.1:+81738547 | MS.gene029065:CDS |
| GCAATGGGAGCAATCTGCAA+TGG | 0.655788 | 1.1:+81739080 | MS.gene029065:CDS |
| TTGGAGCAAGTGCTCCAGCA+GGG | 0.659920 | 1.1:+81739750 | MS.gene029065:CDS |
| TTCGAGTGCAGCACCCTCAG+GGG | 0.661757 | 1.1:-81738561 | None:intergenic |
| GCACTGCCACCAATAAGACC+AGG | 0.667283 | 1.1:-81738957 | None:intergenic |
| CTTCAATAGAAGTTCCCGGA+AGG | 0.667722 | 1.1:-81739421 | None:intergenic |
| TTGAAGCAGTTTCGACAATG+GGG | 0.670618 | 1.1:+81737397 | MS.gene029065:CDS |
| ATTTCTTGTAGCATCAGCAG+GGG | 0.674247 | 1.1:-81738895 | None:intergenic |
| GTATGAGAAGAAATACAAAG+AGG | 0.678342 | 1.1:+81738610 | MS.gene029065:CDS |
| GACAGCTAGAGTCAGCATTG+AGG | 0.680303 | 1.1:+81739661 | MS.gene029065:CDS |
| CAAGGAGTATGGCATAACCA+AGG | 0.693332 | 1.1:+81739781 | MS.gene029065:CDS |
| TTTCCTTAGATCATCAGCGG+CGG | 0.694677 | 1.1:-81739543 | None:intergenic |
| TTGGCAATACCCTGACCCAG+AGG | 0.713966 | 1.1:-81737596 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAGATAAAATATTGAAATT+TGG | - | chr1.1:81736943-81736962 | None:intergenic | 10.0% |
| !!! | TGAAAATTACTTTAATATTT+TGG | + | chr1.1:81737156-81737175 | MS.gene029065:intron | 10.0% |
| !! | TAATCAATTTATCTATAACA+TGG | - | chr1.1:81738154-81738173 | None:intergenic | 15.0% |
| !! | TATAGATAAATTGATTATAC+TGG | + | chr1.1:81738157-81738176 | MS.gene029065:intron | 15.0% |
| !!! | GTTGTTATATCATTTTTATT+TGG | + | chr1.1:81738236-81738255 | MS.gene029065:intron | 15.0% |
| !! | AATTTATCTATAACATGGAT+TGG | - | chr1.1:81738149-81738168 | None:intergenic | 20.0% |
| !! | ATTTATCTATAACATGGATT+GGG | - | chr1.1:81738148-81738167 | None:intergenic | 20.0% |
| !! | TTAAAATTGAAAATCTGCAA+TGG | + | chr1.1:81737035-81737054 | MS.gene029065:intron | 20.0% |
| !!! | AAGATGTTAAAAAGTATGAA+TGG | + | chr1.1:81738449-81738468 | MS.gene029065:intron | 20.0% |
| !!! | AATTTTGATTACTATTTGAC+AGG | + | chr1.1:81738291-81738310 | MS.gene029065:intron | 20.0% |
| !!! | AGATGTTAAAAAGTATGAAT+GGG | + | chr1.1:81738450-81738469 | MS.gene029065:intron | 20.0% |
| !!! | ATTACTTTAATATTTTGGCT+TGG | + | chr1.1:81737161-81737180 | MS.gene029065:intron | 20.0% |
| !!! | TTATCTTTTGCTTTTGTTTT+TGG | + | chr1.1:81737790-81737809 | MS.gene029065:intron | 20.0% |
| !!! | TTCTATTACTTTTAAACTTG+TGG | + | chr1.1:81736979-81736998 | MS.gene029065:intron | 20.0% |
| !!! | TTTGGGTTGAATAAAATAAT+AGG | + | chr1.1:81737366-81737385 | MS.gene029065:intron | 20.0% |
| ! | AACAAGTAACAAGATGTAAT+TGG | - | chr1.1:81737712-81737731 | None:intergenic | 25.0% |
| ! | GATAATCACATATCTATTGA+TGG | + | chr1.1:81737926-81737945 | MS.gene029065:CDS | 25.0% |
| ! | TAGTAATGAAATTGTTAGTC+AGG | - | chr1.1:81737287-81737306 | None:intergenic | 25.0% |
| !! | AAGTATTTTTCTCCTTTGTT+TGG | - | chr1.1:81737084-81737103 | None:intergenic | 25.0% |
| !!! | TCATACTTTTTAACATCTTC+TGG | - | chr1.1:81738448-81738467 | None:intergenic | 25.0% |
| !!! | TGTTATTTTTATAAGACCTG+TGG | - | chr1.1:81737476-81737495 | None:intergenic | 25.0% |
| !!! | TTTCTATTGATTTTGTCTTG+AGG | + | chr1.1:81738723-81738742 | MS.gene029065:intron | 25.0% |
| AAAGTAAACCTTTCCTTTCT+TGG | + | chr1.1:81738211-81738230 | MS.gene029065:intron | 30.0% | |
| AAGTAAACCTTTCCTTTCTT+GGG | + | chr1.1:81738212-81738231 | MS.gene029065:intron | 30.0% | |
| ACCTAAACAACGAAAATACA+AGG | - | chr1.1:81737576-81737595 | None:intergenic | 30.0% | |
| AGACAAACCTACTTTGATTA+AGG | + | chr1.1:81738084-81738103 | MS.gene029065:CDS | 30.0% | |
| AGCAGTCAAAATTCAAAAGT+AGG | - | chr1.1:81738772-81738791 | None:intergenic | 30.0% | |
| AGGTATGTTATATTAGGAGA+TGG | + | chr1.1:81737821-81737840 | MS.gene029065:intron | 30.0% | |
| AGTTGAGAAGAGAAGTAAAT+TGG | - | chr1.1:81736917-81736936 | None:intergenic | 30.0% | |
| ATAGGTTCAAATCCAAACAA+AGG | + | chr1.1:81737069-81737088 | MS.gene029065:intron | 30.0% | |
| ATGACTTTGTTGAAATCGTT+TGG | + | chr1.1:81738999-81739018 | MS.gene029065:CDS | 30.0% | |
| CAAGATCATGAAAATATCAG+TGG | - | chr1.1:81738498-81738517 | None:intergenic | 30.0% | |
| CATTACAGAAGAAGCAAAAA+AGG | - | chr1.1:81737541-81737560 | None:intergenic | 30.0% | |
| GGTCATAACATAAATAACTC+CGG | - | chr1.1:81739207-81739226 | None:intergenic | 30.0% | |
| GTATGAGAAGAAATACAAAG+AGG | + | chr1.1:81738610-81738629 | MS.gene029065:CDS | 30.0% | |
| GTTCCAATCAAAATAACATC+AGG | - | chr1.1:81739497-81739516 | None:intergenic | 30.0% | |
| TAAACCAAGAAGGATTCTTT+GGG | - | chr1.1:81736757-81736776 | None:intergenic | 30.0% | |
| TAAATGTCACATTACGAATC+AGG | - | chr1.1:81737773-81737792 | None:intergenic | 30.0% | |
| TAATGAATTGATATGCACAG+TGG | + | chr1.1:81737307-81737326 | MS.gene029065:intron | 30.0% | |
| TCACTAACCTTAATCAAAGT+AGG | - | chr1.1:81738094-81738113 | None:intergenic | 30.0% | |
| TCTGAAAGTTGAAGTCAAAT+TGG | - | chr1.1:81738860-81738879 | None:intergenic | 30.0% | |
| TGAAATTTATCTAATCCCAC+AGG | - | chr1.1:81737005-81737024 | None:intergenic | 30.0% | |
| TGTGATCAATATTCCACAAA+TGG | - | chr1.1:81738834-81738853 | None:intergenic | 30.0% | |
| TTAAACCAAGAAGGATTCTT+TGG | - | chr1.1:81736758-81736777 | None:intergenic | 30.0% | |
| TTAAGGTTAGTGACATGAAA+TGG | + | chr1.1:81738101-81738120 | MS.gene029065:intron | 30.0% | |
| ! | TCCTTGTATTTTCGTTGTTT+AGG | + | chr1.1:81737572-81737591 | MS.gene029065:intron | 30.0% |
| ! | TGCTCTAGGTATGTTATATT+AGG | + | chr1.1:81737815-81737834 | MS.gene029065:intron | 30.0% |
| !! | GAGTAAAGTGTCATACTTTT+TGG | + | chr1.1:81738700-81738719 | MS.gene029065:intron | 30.0% |
| !! | TCTATTGAAGGTGTTGAAAA+GGG | + | chr1.1:81739434-81739453 | MS.gene029065:CDS | 30.0% |
| !! | TTCTATTGAAGGTGTTGAAA+AGG | + | chr1.1:81739433-81739452 | MS.gene029065:CDS | 30.0% |
| !! | TTTTTATTTGGTTTCGATGC+TGG | + | chr1.1:81738248-81738267 | MS.gene029065:intron | 30.0% |
| !!! | AAGCCTGATGTTATTTTGAT+TGG | + | chr1.1:81739491-81739510 | MS.gene029065:CDS | 30.0% |
| !!! | AGTTGTTTCTTTTGTTAGCT+GGG | + | chr1.1:81739583-81739602 | MS.gene029065:CDS | 30.0% |
| !!! | GATGTTATTTTGATTGGAAC+TGG | + | chr1.1:81739497-81739516 | MS.gene029065:CDS | 30.0% |
| AAAAAAGGCTCACAGTAACA+TGG | - | chr1.1:81737526-81737545 | None:intergenic | 35.0% | |
| AAGTATGACACTTTACTCAC+CGG | - | chr1.1:81738698-81738717 | None:intergenic | 35.0% | |
| ACAAAGAAAGTTGCACAGTA+TGG | - | chr1.1:81739134-81739153 | None:intergenic | 35.0% | |
| AGAGAAGTAAATTGGTTGGT+TGG | - | chr1.1:81736909-81736928 | None:intergenic | 35.0% | |
| ATAACCCAAAGAATCCTTCT+TGG | + | chr1.1:81736750-81736769 | MS.gene029065:CDS | 35.0% | |
| ATCGTTTGGAGATTTCCAAA+AGG | + | chr1.1:81739013-81739032 | MS.gene029065:CDS | 35.0% | |
| ATTAGGAGATGGTTGTCAAA+TGG | + | chr1.1:81737832-81737851 | MS.gene029065:CDS | 35.0% | |
| ATTGGTTATCTCACGTGTAA+TGG | - | chr1.1:81737694-81737713 | None:intergenic | 35.0% | |
| ATTGTTCCTGATAGCTTATG+TGG | + | chr1.1:81737200-81737219 | MS.gene029065:intron | 35.0% | |
| CATAAGATTGTTGGAAGCAA+GGG | + | chr1.1:81739704-81739723 | MS.gene029065:CDS | 35.0% | |
| CGATTTCAACAAAGTCATGT+TGG | - | chr1.1:81738997-81739016 | None:intergenic | 35.0% | |
| CTAAAGAAGTAGATGCTACA+AGG | + | chr1.1:81738386-81738405 | MS.gene029065:CDS | 35.0% | |
| GAAATGGAAATTCAAGCAAG+TGG | + | chr1.1:81738117-81738136 | MS.gene029065:intron | 35.0% | |
| GAGAAGAGAAGTAAATTGGT+TGG | - | chr1.1:81736913-81736932 | None:intergenic | 35.0% | |
| GATATAACAACACCCAAGAA+AGG | - | chr1.1:81738227-81738246 | None:intergenic | 35.0% | |
| GGGAAAATATACAAGGAGTA+TGG | + | chr1.1:81739770-81739789 | MS.gene029065:CDS | 35.0% | |
| GTTATGACCCATGATTCAAT+TGG | + | chr1.1:81739218-81739237 | MS.gene029065:CDS | 35.0% | |
| TAACCTGCTTAACATTCCTT+AGG | + | chr1.1:81738522-81738541 | MS.gene029065:intron | 35.0% | |
| TCAAAACATTTGGCATTGCT+CGG | - | chr1.1:81739295-81739314 | None:intergenic | 35.0% | |
| TCCAAGTCCAATTGAATCAT+GGG | - | chr1.1:81739228-81739247 | None:intergenic | 35.0% | |
| TGACATAATGTGACTGTTGA+GGG | + | chr1.1:81738186-81738205 | MS.gene029065:intron | 35.0% | |
| TGAGAAGAAATACAAAGAGG+AGG | + | chr1.1:81738613-81738632 | MS.gene029065:CDS | 35.0% | |
| TGAGTTCTATCAACCATTTG+TGG | + | chr1.1:81738818-81738837 | MS.gene029065:intron | 35.0% | |
| TGATCAGTCAGATGAATACA+AGG | + | chr1.1:81739616-81739635 | MS.gene029065:CDS | 35.0% | |
| TTCTTTCCTTAGATCATCAG+CGG | - | chr1.1:81739549-81739568 | None:intergenic | 35.0% | |
| TTGAAAATCTGCAATGGAGT+TGG | + | chr1.1:81737041-81737060 | MS.gene029065:intron | 35.0% | |
| TTTGGTTGGCATAAGATTGT+TGG | + | chr1.1:81739695-81739714 | MS.gene029065:CDS | 35.0% | |
| ! | CATGTGATTTGGGTAAAGAA+CGG | + | chr1.1:81738007-81738026 | MS.gene029065:CDS | 35.0% |
| ! | GAATGTTGATCAACGTTTTG+AGG | + | chr1.1:81737973-81737992 | MS.gene029065:CDS | 35.0% |
| ! | TTTTAACATCTTCTGGCACA+TGG | - | chr1.1:81738441-81738460 | None:intergenic | 35.0% |
| !! | CTGTAGGAATTAGCTTTGTT+TGG | - | chr1.1:81738343-81738362 | None:intergenic | 35.0% |
| !! | GAGCTGAATTTGTTGTGTTT+GGG | + | chr1.1:81737349-81737368 | MS.gene029065:intron | 35.0% |
| !! | TGAGCTGAATTTGTTGTGTT+TGG | + | chr1.1:81737348-81737367 | MS.gene029065:intron | 35.0% |
| !!! | GAGTTGTTTCTTTTGTTAGC+TGG | + | chr1.1:81739582-81739601 | MS.gene029065:CDS | 35.0% |
| !!! | TTTTGTTTTTGGTCTGCTCT+AGG | + | chr1.1:81737801-81737820 | MS.gene029065:intron | 35.0% |
| AAAATCTGCAATGGAGTTGG+AGG | + | chr1.1:81737044-81737063 | MS.gene029065:intron | 40.0% | |
| AACAACACCCAAGAAAGGAA+AGG | - | chr1.1:81738222-81738241 | None:intergenic | 40.0% | |
| AATAAGACCAGGAAGAACCT+TGG | - | chr1.1:81738949-81738968 | None:intergenic | 40.0% | |
| ACACAAGGCAGAAATCCTTA+TGG | - | chr1.1:81739180-81739199 | None:intergenic | 40.0% | |
| ACACCTTCAATAGAAGTTCC+CGG | - | chr1.1:81739428-81739447 | None:intergenic | 40.0% | |
| ACAGCAAAATCTAAATGCCC+TGG | + | chr1.1:81738923-81738942 | MS.gene029065:CDS | 40.0% | |
| ACCATTTCAGACAACTCATC+AGG | + | chr1.1:81739464-81739483 | MS.gene029065:CDS | 40.0% | |
| ACCCATGATTCAATTGGACT+TGG | + | chr1.1:81739224-81739243 | MS.gene029065:CDS | 40.0% | |
| ACCTGATGAGTTGTCTGAAA+TGG | - | chr1.1:81739468-81739487 | None:intergenic | 40.0% | |
| ACTTGAAGCAGTTTCGACAA+TGG | + | chr1.1:81737395-81737414 | MS.gene029065:CDS | 40.0% | |
| ACTTGGATGGCATGTGATTT+GGG | + | chr1.1:81737997-81738016 | MS.gene029065:CDS | 40.0% | |
| AGAACCAAATCCAATGGTAG+TGG | - | chr1.1:81738320-81738339 | None:intergenic | 40.0% | |
| AGATTTCTTGTAGCATCAGC+AGG | - | chr1.1:81738900-81738919 | None:intergenic | 40.0% | |
| AGCAGAAATAACAGCTTCCT+TGG | - | chr1.1:81739801-81739820 | None:intergenic | 40.0% | |
| ATCGTGAATTACCTGCTGAT+TGG | + | chr1.1:81738660-81738679 | MS.gene029065:CDS | 40.0% | |
| ATGCCTAAGGAATGTTAAGC+AGG | - | chr1.1:81738528-81738547 | None:intergenic | 40.0% | |
| ATTTCTTGTAGCATCAGCAG+GGG | - | chr1.1:81738898-81738917 | None:intergenic | 40.0% | |
| CAACAAAGTCATGTTGGAAG+AGG | - | chr1.1:81738991-81739010 | None:intergenic | 40.0% | |
| CAACTTTCAGACTTACACTC+CGG | + | chr1.1:81738869-81738888 | MS.gene029065:intron | 40.0% | |
| CGATCACGATTAAACCAAGA+AGG | - | chr1.1:81736767-81736786 | None:intergenic | 40.0% | |
| CTCCAAGTCCAATTGAATCA+TGG | - | chr1.1:81739229-81739248 | None:intergenic | 40.0% | |
| CTTGAAGCAGTTTCGACAAT+GGG | + | chr1.1:81737396-81737415 | MS.gene029065:CDS | 40.0% | |
| GATTTCTTGTAGCATCAGCA+GGG | - | chr1.1:81738899-81738918 | None:intergenic | 40.0% | |
| GCATAAGATTGTTGGAAGCA+AGG | + | chr1.1:81739703-81739722 | MS.gene029065:CDS | 40.0% | |
| GCTAATTCCTACAGTGTTCA+CGG | + | chr1.1:81738349-81738368 | MS.gene029065:CDS | 40.0% | |
| GCTGATGATCTAAGGAAAGA+AGG | + | chr1.1:81739548-81739567 | MS.gene029065:CDS | 40.0% | |
| GCTTAACATTCCTTAGGCAT+TGG | + | chr1.1:81738528-81738547 | MS.gene029065:intron | 40.0% | |
| GTGACATAATGTGACTGTTG+AGG | + | chr1.1:81738185-81738204 | MS.gene029065:intron | 40.0% | |
| GTTACCACTACCATTGGATT+TGG | + | chr1.1:81738313-81738332 | MS.gene029065:CDS | 40.0% | |
| GTTTGGAGAACCAAATCCAA+TGG | - | chr1.1:81738326-81738345 | None:intergenic | 40.0% | |
| TATGCTCTTCTTCATCTTGC+TGG | + | chr1.1:81736824-81736843 | MS.gene029065:CDS | 40.0% | |
| TATGGAATTGAAGTCACCAC+AGG | + | chr1.1:81737457-81737476 | MS.gene029065:CDS | 40.0% | |
| TCCAAATCGATCAATGCCAA+TGG | - | chr1.1:81739735-81739754 | None:intergenic | 40.0% | |
| TCCAGCAGGGAAAATATACA+AGG | + | chr1.1:81739763-81739782 | MS.gene029065:CDS | 40.0% | |
| TCCATATGTCTCGAAGTTCT+CGG | - | chr1.1:81737443-81737462 | None:intergenic | 40.0% | |
| TCGTATAGAATGTGACCCAT+TGG | - | chr1.1:81736716-81736735 | None:intergenic | 40.0% | |
| TGAAATTCGTGCAGCCATTA+AGG | + | chr1.1:81738045-81738064 | MS.gene029065:CDS | 40.0% | |
| TGATTCAATTGGACTTGGAG+AGG | + | chr1.1:81739229-81739248 | MS.gene029065:CDS | 40.0% | |
| TGGGTAAAGAACGGAAATAC+TGG | + | chr1.1:81738016-81738035 | MS.gene029065:CDS | 40.0% | |
| TTGAAGCAGTTTCGACAATG+GGG | + | chr1.1:81737397-81737416 | MS.gene029065:CDS | 40.0% | |
| TTTCGTTGTTTAGGTCCTCT+GGG | + | chr1.1:81737581-81737600 | MS.gene029065:intron | 40.0% | |
| TTTCTGCCACATAAGCTATC+AGG | - | chr1.1:81737209-81737228 | None:intergenic | 40.0% | |
| ! | ACTTTTAAACTTGTGGCCTG+TGG | + | chr1.1:81736986-81737005 | MS.gene029065:intron | 40.0% |
| ! | CTTTTAAACTTGTGGCCTGT+GGG | + | chr1.1:81736987-81737006 | MS.gene029065:intron | 40.0% |
| ! | GGACGAAGCATCAAAACATT+TGG | - | chr1.1:81739305-81739324 | None:intergenic | 40.0% |
| ! | TATTGCCAATGGTGTTGGAT+TGG | + | chr1.1:81737610-81737629 | MS.gene029065:CDS | 40.0% |
| ! | TCCTTGTATATTTTCCCTGC+TGG | - | chr1.1:81739767-81739786 | None:intergenic | 40.0% |
| ! | TCGTGAATTACCTGCTGATT+GGG | + | chr1.1:81738661-81738680 | MS.gene029065:CDS | 40.0% |
| ! | TTTTCGTTGTTTAGGTCCTC+TGG | + | chr1.1:81737580-81737599 | MS.gene029065:intron | 40.0% |
| !! | AAGGTTCTTCCTGGTCTTAT+TGG | + | chr1.1:81738948-81738967 | MS.gene029065:CDS | 40.0% |
| !! | ACCATTGGCATTGATCGATT+TGG | + | chr1.1:81739731-81739750 | MS.gene029065:CDS | 40.0% |
| !! | ATTGAAGGTGTTGAAAAGGG+TGG | + | chr1.1:81739437-81739456 | MS.gene029065:CDS | 40.0% |
| !! | CAATGTTCGATTTGGTGTCA+GGG | + | chr1.1:81739052-81739071 | MS.gene029065:CDS | 40.0% |
| !!! | TTTGTTTTGTCTGCTGGACA+TGG | + | chr1.1:81736788-81736807 | MS.gene029065:CDS | 40.0% |
| AAATCTAAATGCCCTGGCCA+AGG | + | chr1.1:81738929-81738948 | MS.gene029065:CDS | 45.0% | |
| AAGTGCCAATCCAACACCAT+TGG | - | chr1.1:81737618-81737637 | None:intergenic | 45.0% | |
| AATAACTCCGGCTTCACACA+AGG | - | chr1.1:81739195-81739214 | None:intergenic | 45.0% | |
| AATCGAACATTGCGCTCTTC+TGG | - | chr1.1:81739044-81739063 | None:intergenic | 45.0% | |
| AATGAAGCGTGTTCACTTGC+CGG | + | chr1.1:81737866-81737885 | MS.gene029065:CDS | 45.0% | |
| ACATCTTCTGGCACATGGAA+AGG | - | chr1.1:81738436-81738455 | None:intergenic | 45.0% | |
| ACTACATGAGAGCTGCCATA+AGG | + | chr1.1:81739162-81739181 | MS.gene029065:CDS | 45.0% | |
| ATAGAAGTTCCCGGAAGGTT+AGG | - | chr1.1:81739419-81739438 | None:intergenic | 45.0% | |
| ATTGAGGCGGGATCAACATT+TGG | + | chr1.1:81739677-81739696 | MS.gene029065:CDS | 45.0% | |
| ATTTCTGCCTTGTGTGAAGC+CGG | + | chr1.1:81739185-81739204 | MS.gene029065:CDS | 45.0% | |
| CAAAAGTTGCCTAACCTTCC+GGG | + | chr1.1:81739407-81739426 | MS.gene029065:CDS | 45.0% | |
| CAAGAATTGAGGGTCTCTTC+TGG | - | chr1.1:81739376-81739395 | None:intergenic | 45.0% | |
| CACAGTATGGAATGAATCCC+GGG | - | chr1.1:81739121-81739140 | None:intergenic | 45.0% | |
| CACTTGGATGGCATGTGATT+TGG | + | chr1.1:81737996-81738015 | MS.gene029065:CDS | 45.0% | |
| CCATATGTCTCGAAGTTCTC+GGG | - | chr1.1:81737442-81737461 | None:intergenic | 45.0% | |
| CCTCAATTCTTGCCCTTTCT+CGG | + | chr1.1:81739384-81739403 | MS.gene029065:CDS | 45.0% | |
| CGAGAAAGGGCAAGAATTGA+GGG | - | chr1.1:81739386-81739405 | None:intergenic | 45.0% | |
| CTACAAGGCAGAATCTTGGA+TGG | + | chr1.1:81738401-81738420 | MS.gene029065:CDS | 45.0% | |
| CTTCAATAGAAGTTCCCGGA+AGG | - | chr1.1:81739424-81739443 | None:intergenic | 45.0% | |
| CTTCCGGGAACTTCTATTGA+AGG | + | chr1.1:81739422-81739441 | MS.gene029065:CDS | 45.0% | |
| GACAGCCTTTGCTTCCTTAA+TGG | - | chr1.1:81738062-81738081 | None:intergenic | 45.0% | |
| GATGCTACAAGGCAGAATCT+TGG | + | chr1.1:81738397-81738416 | MS.gene029065:CDS | 45.0% | |
| GCAAAAGTTGCCTAACCTTC+CGG | + | chr1.1:81739406-81739425 | MS.gene029065:CDS | 45.0% | |
| GCACAGTATGGAATGAATCC+CGG | - | chr1.1:81739122-81739141 | None:intergenic | 45.0% | |
| GCAGTTTCATTACCATCAGC+TGG | - | chr1.1:81739326-81739345 | None:intergenic | 45.0% | |
| GGAAGCAAGGGAAAAACCAT+TGG | + | chr1.1:81739716-81739735 | MS.gene029065:CDS | 45.0% | |
| GGAGATGGTTGTCAAATGGA+AGG | + | chr1.1:81737836-81737855 | MS.gene029065:CDS | 45.0% | |
| TATGGCAGCTCTCATGTAGT+CGG | - | chr1.1:81739162-81739181 | None:intergenic | 45.0% | |
| TCAATTGGACTTGGAGAGGA+TGG | + | chr1.1:81739233-81739252 | MS.gene029065:CDS | 45.0% | |
| TGACAGGTTACCACTACCAT+TGG | + | chr1.1:81738307-81738326 | MS.gene029065:intron | 45.0% | |
| TGCAGCCATTAAGGAAGCAA+AGG | + | chr1.1:81738054-81738073 | MS.gene029065:CDS | 45.0% | |
| TGGTATTGCTCTTCATAGCC+CGG | + | chr1.1:81739100-81739119 | MS.gene029065:CDS | 45.0% | |
| TGGTCAACAATCTCACTGTC+AGG | - | chr1.1:81737674-81737693 | None:intergenic | 45.0% | |
| TTTCCTTAGATCATCAGCGG+CGG | - | chr1.1:81739546-81739565 | None:intergenic | 45.0% | |
| ! | AGGCAACTTTTGCCGAGAAA+GGG | - | chr1.1:81739399-81739418 | None:intergenic | 45.0% |
| ! | CAAGGAGTATGGCATAACCA+AGG | + | chr1.1:81739781-81739800 | MS.gene029065:CDS | 45.0% |
| ! | GAAGAGCGCAATGTTCGATT+TGG | + | chr1.1:81739044-81739063 | MS.gene029065:CDS | 45.0% |
| ! | GCTGATGGTAATGAAACTGC+TGG | + | chr1.1:81739326-81739345 | MS.gene029065:CDS | 45.0% |
| ! | TAGGCAACTTTTGCCGAGAA+AGG | - | chr1.1:81739400-81739419 | None:intergenic | 45.0% |
| ! | TGCTCTATTGGCTGATGAGT+TGG | - | chr1.1:81739260-81739279 | None:intergenic | 45.0% |
| ! | TGCTGGTTATGACAGTGTCA+AGG | + | chr1.1:81736841-81736860 | MS.gene029065:CDS | 45.0% |
| !! | GATTGGAACTGGTTCTGAGT+TGG | + | chr1.1:81739508-81739527 | MS.gene029065:CDS | 45.0% |
| !! | GCAATGTTCGATTTGGTGTC+AGG | + | chr1.1:81739051-81739070 | MS.gene029065:CDS | 45.0% |
| !! | GTTCTTCCTGGTCTTATTGG+TGG | + | chr1.1:81738951-81738970 | MS.gene029065:CDS | 45.0% |
| !! | TGATTGGGAGAAAGCACTTC+CGG | + | chr1.1:81738676-81738695 | MS.gene029065:CDS | 45.0% |
| !!! | AACGTTTTGAGGCACTTGGA+TGG | + | chr1.1:81737984-81738003 | MS.gene029065:CDS | 45.0% |
| !!! | GATCAACGTTTTGAGGCACT+TGG | + | chr1.1:81737980-81737999 | MS.gene029065:CDS | 45.0% |
| !!! | GATCGCTTTGTTTTGTCTGC+TGG | + | chr1.1:81736782-81736801 | MS.gene029065:CDS | 45.0% |
| AAGCTTGCCAGGTGCTCTAT+TGG | - | chr1.1:81739272-81739291 | None:intergenic | 50.0% | |
| ACTCTAGCTGTCACAGAAGC+AGG | - | chr1.1:81739653-81739672 | None:intergenic | 50.0% | |
| AGGCGGGATCAACATTTGGT+TGG | + | chr1.1:81739681-81739700 | MS.gene029065:CDS | 50.0% | |
| AGTGCTTTCTCCCAATCAGC+AGG | - | chr1.1:81738674-81738693 | None:intergenic | 50.0% | |
| AGTGTTCACGGAGCTGCATT+GGG | + | chr1.1:81738361-81738380 | MS.gene029065:CDS | 50.0% | |
| CAATGGGGAAGCAAAACTCC+TGG | + | chr1.1:81737412-81737431 | MS.gene029065:CDS | 50.0% | |
| CCCGAGAACTTCGAGACATA+TGG | + | chr1.1:81737439-81737458 | MS.gene029065:CDS | 50.0% | |
| CCGAGAAAGGGCAAGAATTG+AGG | - | chr1.1:81739387-81739406 | None:intergenic | 50.0% | |
| CTCTAGCTGTCACAGAAGCA+GGG | - | chr1.1:81739652-81739671 | None:intergenic | 50.0% | |
| CTTTCCAAGACCCCAATGTC+CGG | - | chr1.1:81737888-81737907 | None:intergenic | 50.0% | |
| GACAGCTAGAGTCAGCATTG+AGG | + | chr1.1:81739661-81739680 | MS.gene029065:CDS | 50.0% | |
| GCAATGGAGTTGGAGGTCAT+AGG | + | chr1.1:81737051-81737070 | MS.gene029065:intron | 50.0% | |
| GCAATGGGAGCAATCTGCAA+TGG | + | chr1.1:81739080-81739099 | MS.gene029065:CDS | 50.0% | |
| GGCACATGGAAAGGCTCATA+TGG | - | chr1.1:81738427-81738446 | None:intergenic | 50.0% | |
| GGTATTGCTCTTCATAGCCC+GGG | + | chr1.1:81739101-81739120 | MS.gene029065:CDS | 50.0% | |
| GTGTTCACTTGCCGGACATT+GGG | + | chr1.1:81737874-81737893 | MS.gene029065:CDS | 50.0% | |
| TATGGCGACTCCAATGCCTA+AGG | - | chr1.1:81738541-81738560 | None:intergenic | 50.0% | |
| TGGTTTCGATGCTGGTCACA+TGG | + | chr1.1:81738256-81738275 | MS.gene029065:intron | 50.0% | |
| TGTTCACTTGCCGGACATTG+GGG | + | chr1.1:81737875-81737894 | MS.gene029065:CDS | 50.0% | |
| TGTTTAGGTCCTCTGGGTCA+GGG | + | chr1.1:81737587-81737606 | MS.gene029065:intron | 50.0% | |
| TTGATGCTTCGTCCAGCTGA+TGG | + | chr1.1:81739311-81739330 | MS.gene029065:CDS | 50.0% | |
| TTGTTTAGGTCCTCTGGGTC+AGG | + | chr1.1:81737586-81737605 | MS.gene029065:intron | 50.0% | |
| ! | AGCTAGAGTCAGCATTGAGG+CGG | + | chr1.1:81739664-81739683 | MS.gene029065:CDS | 50.0% |
| ! | GGGTCTCTTCTGGTTAAGCA+CGG | - | chr1.1:81739366-81739385 | None:intergenic | 50.0% |
| ! | TCATCAGCCAATAGAGCACC+TGG | + | chr1.1:81739262-81739281 | MS.gene029065:CDS | 50.0% |
| !! | CAGGGTATTGCCAATGGTGT+TGG | + | chr1.1:81737605-81737624 | MS.gene029065:CDS | 50.0% |
| !!! | GCTCTTCTGGAGTAGCCTTT+TGG | - | chr1.1:81739031-81739050 | None:intergenic | 50.0% |
| ACCAGGAAGAACCTTGGCCA+GGG | - | chr1.1:81738943-81738962 | None:intergenic | 55.0% | |
| AGAGGAGGCTGCAGAGCTAA+AGG | + | chr1.1:81738628-81738647 | MS.gene029065:CDS | 55.0% | |
| CAGTGTTCACGGAGCTGCAT+TGG | + | chr1.1:81738360-81738379 | MS.gene029065:CDS | 55.0% | |
| CGTGTTCACTTGCCGGACAT+TGG | + | chr1.1:81737873-81737892 | MS.gene029065:CDS | 55.0% | |
| GCACTGCCACCAATAAGACC+AGG | - | chr1.1:81738960-81738979 | None:intergenic | 55.0% | |
| GGTGTCAGGGAACACGCAAT+GGG | + | chr1.1:81739065-81739084 | MS.gene029065:CDS | 55.0% | |
| GTAGCATCAGCAGGGGTTTC+CGG | - | chr1.1:81738891-81738910 | None:intergenic | 55.0% | |
| TCGAAGTTCTCGGGATGTCC+AGG | - | chr1.1:81737433-81737452 | None:intergenic | 55.0% | |
| TGCAGCTCCGTGAACACTGT+AGG | - | chr1.1:81738359-81738378 | None:intergenic | 55.0% | |
| TTGGAGCAAGTGCTCCAGCA+GGG | + | chr1.1:81739750-81739769 | MS.gene029065:CDS | 55.0% | |
| TTGGCAATACCCTGACCCAG+AGG | - | chr1.1:81737599-81737618 | None:intergenic | 55.0% | |
| ! | GCTAGAGTCAGCATTGAGGC+GGG | + | chr1.1:81739665-81739684 | MS.gene029065:CDS | 55.0% |
| ! | TGGTGTCAGGGAACACGCAA+TGG | + | chr1.1:81739064-81739083 | MS.gene029065:CDS | 55.0% |
| ! | TTTGGAGCAAGTGCTCCAGC+AGG | + | chr1.1:81739749-81739768 | MS.gene029065:CDS | 55.0% |
| !! | CTGGGTCAGGGTATTGCCAA+TGG | + | chr1.1:81737599-81737618 | MS.gene029065:CDS | 55.0% |
| CCGTGCAGCCAAGTGCTTCT+CGG | - | chr1.1:81737642-81737661 | None:intergenic | 60.0% | |
| CTGCCGCCGCTGATGATCTA+AGG | + | chr1.1:81739540-81739559 | MS.gene029065:CDS | 60.0% | |
| CTTCGAGTGCAGCACCCTCA+GGG | - | chr1.1:81738565-81738584 | None:intergenic | 60.0% | |
| CTTGCCGGACATTGGGGTCT+TGG | + | chr1.1:81737881-81737900 | MS.gene029065:CDS | 60.0% | |
| GACCAGGAAGAACCTTGGCC+AGG | - | chr1.1:81738944-81738963 | None:intergenic | 60.0% | |
| GCATTGCTCGGAAGCTTGCC+AGG | - | chr1.1:81739283-81739302 | None:intergenic | 60.0% | |
| GTGCTGCACTCGAAGCTGAG+TGG | + | chr1.1:81738570-81738589 | MS.gene029065:CDS | 60.0% | |
| TAGATCATCAGCGGCGGCAG+CGG | - | chr1.1:81739540-81739559 | None:intergenic | 60.0% | |
| TGGAGTCGCCATACCCCTGA+GGG | + | chr1.1:81738548-81738567 | MS.gene029065:CDS | 60.0% | |
| TTCGAGTGCAGCACCCTCAG+GGG | - | chr1.1:81738564-81738583 | None:intergenic | 60.0% | |
| TTGGAGTCGCCATACCCCTG+AGG | + | chr1.1:81738547-81738566 | MS.gene029065:CDS | 60.0% | |
| !! | CCGAGAAGCACTTGGCTGCA+CGG | + | chr1.1:81737639-81737658 | MS.gene029065:CDS | 60.0% |
| !! | GGCACTTGCCGAGAAGCACT+TGG | + | chr1.1:81737631-81737650 | MS.gene029065:CDS | 60.0% |
| GCCCTGGCCAAGGTTCTTCC+TGG | + | chr1.1:81738939-81738958 | MS.gene029065:CDS | 65.0% | |
| GCTTCGAGTGCAGCACCCTC+AGG | - | chr1.1:81738566-81738585 | None:intergenic | 65.0% | |
| GTGCAGCACCCTCAGGGGTA+TGG | - | chr1.1:81738559-81738578 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 81736701 | 81739838 | 81736701 | ID=MS.gene029065 |
| chr1.1 | mRNA | 81736701 | 81739838 | 81736701 | ID=MS.gene029065.t1;Parent=MS.gene029065 |
| chr1.1 | exon | 81736701 | 81736862 | 81736701 | ID=MS.gene029065.t1.exon1;Parent=MS.gene029065.t1 |
| chr1.1 | CDS | 81736701 | 81736862 | 81736701 | ID=cds.MS.gene029065.t1;Parent=MS.gene029065.t1 |
| chr1.1 | exon | 81737388 | 81737478 | 81737388 | ID=MS.gene029065.t1.exon2;Parent=MS.gene029065.t1 |
| chr1.1 | CDS | 81737388 | 81737478 | 81737388 | ID=cds.MS.gene029065.t1;Parent=MS.gene029065.t1 |
| chr1.1 | exon | 81737594 | 81737699 | 81737594 | ID=MS.gene029065.t1.exon3;Parent=MS.gene029065.t1 |
| chr1.1 | CDS | 81737594 | 81737699 | 81737594 | ID=cds.MS.gene029065.t1;Parent=MS.gene029065.t1 |
| chr1.1 | exon | 81737823 | 81738105 | 81737823 | ID=MS.gene029065.t1.exon4;Parent=MS.gene029065.t1 |
| chr1.1 | CDS | 81737823 | 81738105 | 81737823 | ID=cds.MS.gene029065.t1;Parent=MS.gene029065.t1 |
| chr1.1 | exon | 81738313 | 81738461 | 81738313 | ID=MS.gene029065.t1.exon5;Parent=MS.gene029065.t1 |
| chr1.1 | CDS | 81738313 | 81738461 | 81738313 | ID=cds.MS.gene029065.t1;Parent=MS.gene029065.t1 |
| chr1.1 | exon | 81738544 | 81738697 | 81738544 | ID=MS.gene029065.t1.exon6;Parent=MS.gene029065.t1 |
| chr1.1 | CDS | 81738544 | 81738697 | 81738544 | ID=cds.MS.gene029065.t1;Parent=MS.gene029065.t1 |
| chr1.1 | exon | 81738879 | 81739838 | 81738879 | ID=MS.gene029065.t1.exon7;Parent=MS.gene029065.t1 |
| chr1.1 | CDS | 81738879 | 81739838 | 81738879 | ID=cds.MS.gene029065.t1;Parent=MS.gene029065.t1 |
| Gene Sequence |
| Protein sequence |
