Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06030.t1 | XP_013447140.1 | 97.2 | 677 | 17 | 1 | 1 | 675 | 1 | 677 | 3.10E-195 | 691.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06030.t1 | A0A072TUQ2 | 97.2 | 677 | 17 | 1 | 1 | 675 | 1 | 677 | 2.3e-195 | 691.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene06030 | MS.gene55762 | 0.946721 | 2.69E-105 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene06030 | MS.gene029065 | PPI |
| MS.gene06030 | MS.gene90796 | PPI |
| MS.gene06030 | MS.gene046135 | PPI |
| MS.gene06030 | MS.gene74217 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06030.t1 | MTR_8g099105 | 97.341 | 677 | 16 | 1 | 1 | 675 | 1 | 677 | 0.0 | 1326 |
| MS.gene06030.t1 | MTR_4g094290 | 52.486 | 543 | 190 | 14 | 149 | 641 | 101 | 625 | 1.22e-157 | 469 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene06030.t1 | AT1G64140 | 62.874 | 668 | 199 | 17 | 1 | 648 | 1 | 639 | 0.0 | 706 |
| MS.gene06030.t1 | AT5G09670 | 51.977 | 531 | 190 | 12 | 147 | 645 | 45 | 542 | 1.49e-153 | 455 |
| MS.gene06030.t1 | AT5G09670 | 51.977 | 531 | 190 | 12 | 147 | 645 | 45 | 542 | 1.49e-153 | 455 |
| MS.gene06030.t1 | AT5G64550 | 52.465 | 507 | 172 | 9 | 188 | 642 | 137 | 626 | 5.14e-150 | 449 |
| MS.gene06030.t1 | AT4G12020 | 64.286 | 196 | 20 | 1 | 263 | 408 | 91 | 286 | 2.90e-71 | 253 |
| MS.gene06030.t1 | AT4G12020 | 51.256 | 199 | 94 | 1 | 313 | 511 | 91 | 286 | 2.07e-55 | 205 |
| MS.gene06030.t1 | AT4G12020 | 55.801 | 181 | 77 | 1 | 338 | 518 | 91 | 268 | 4.66e-55 | 204 |
| MS.gene06030.t1 | AT4G12020 | 55.488 | 164 | 58 | 2 | 388 | 551 | 91 | 239 | 1.79e-49 | 187 |
| MS.gene06030.t1 | AT4G12020 | 51.163 | 86 | 42 | 0 | 259 | 344 | 212 | 297 | 3.83e-16 | 83.6 |
| MS.gene06030.t1 | AT4G12020 | 64.286 | 196 | 20 | 1 | 263 | 408 | 91 | 286 | 2.97e-71 | 253 |
| MS.gene06030.t1 | AT4G12020 | 51.256 | 199 | 94 | 1 | 313 | 511 | 91 | 286 | 2.24e-55 | 205 |
| MS.gene06030.t1 | AT4G12020 | 55.801 | 181 | 77 | 1 | 338 | 518 | 91 | 268 | 5.00e-55 | 204 |
| MS.gene06030.t1 | AT4G12020 | 55.488 | 164 | 58 | 2 | 388 | 551 | 91 | 239 | 1.90e-49 | 187 |
| MS.gene06030.t1 | AT4G12020 | 51.163 | 86 | 42 | 0 | 259 | 344 | 212 | 297 | 3.93e-16 | 83.6 |
| MS.gene06030.t1 | AT4G12020 | 64.286 | 196 | 20 | 1 | 263 | 408 | 91 | 286 | 3.21e-71 | 252 |
| MS.gene06030.t1 | AT4G12020 | 51.256 | 199 | 94 | 1 | 313 | 511 | 91 | 286 | 2.35e-55 | 205 |
| MS.gene06030.t1 | AT4G12020 | 55.801 | 181 | 77 | 1 | 338 | 518 | 91 | 268 | 5.44e-55 | 204 |
| MS.gene06030.t1 | AT4G12020 | 55.488 | 164 | 58 | 2 | 388 | 551 | 91 | 239 | 2.03e-49 | 187 |
| MS.gene06030.t1 | AT4G12020 | 51.163 | 86 | 42 | 0 | 259 | 344 | 212 | 297 | 4.03e-16 | 83.6 |
| MS.gene06030.t1 | AT4G12020 | 64.286 | 196 | 20 | 1 | 263 | 408 | 91 | 286 | 3.25e-71 | 252 |
| MS.gene06030.t1 | AT4G12020 | 51.256 | 199 | 94 | 1 | 313 | 511 | 91 | 286 | 2.19e-55 | 205 |
| MS.gene06030.t1 | AT4G12020 | 55.801 | 181 | 77 | 1 | 338 | 518 | 91 | 268 | 5.32e-55 | 204 |
| MS.gene06030.t1 | AT4G12020 | 55.488 | 164 | 58 | 2 | 388 | 551 | 91 | 239 | 1.89e-49 | 187 |
| MS.gene06030.t1 | AT4G12020 | 51.163 | 86 | 42 | 0 | 259 | 344 | 212 | 297 | 3.97e-16 | 83.6 |
| MS.gene06030.t1 | AT4G12020 | 64.286 | 196 | 20 | 1 | 263 | 408 | 91 | 286 | 3.39e-71 | 252 |
| MS.gene06030.t1 | AT4G12020 | 51.256 | 199 | 94 | 1 | 313 | 511 | 91 | 286 | 2.64e-55 | 205 |
| MS.gene06030.t1 | AT4G12020 | 55.801 | 181 | 77 | 1 | 338 | 518 | 91 | 268 | 5.84e-55 | 204 |
| MS.gene06030.t1 | AT4G12020 | 55.488 | 164 | 58 | 2 | 388 | 551 | 91 | 239 | 2.14e-49 | 187 |
| MS.gene06030.t1 | AT4G12020 | 51.163 | 86 | 42 | 0 | 259 | 344 | 212 | 297 | 4.31e-16 | 83.2 |
| MS.gene06030.t1 | AT4G12020 | 64.286 | 196 | 20 | 1 | 263 | 408 | 24 | 219 | 3.48e-71 | 252 |
| MS.gene06030.t1 | AT4G12020 | 51.256 | 199 | 94 | 1 | 313 | 511 | 24 | 219 | 2.40e-55 | 205 |
| MS.gene06030.t1 | AT4G12020 | 55.801 | 181 | 77 | 1 | 338 | 518 | 24 | 201 | 5.03e-55 | 204 |
| MS.gene06030.t1 | AT4G12020 | 55.488 | 164 | 58 | 2 | 388 | 551 | 24 | 172 | 1.88e-49 | 187 |
| MS.gene06030.t1 | AT4G12020 | 51.163 | 86 | 42 | 0 | 259 | 344 | 145 | 230 | 4.33e-16 | 83.2 |
| MS.gene06030.t1 | AT4G12020 | 64.286 | 196 | 20 | 1 | 263 | 408 | 91 | 286 | 3.49e-71 | 252 |
| MS.gene06030.t1 | AT4G12020 | 51.256 | 199 | 94 | 1 | 313 | 511 | 91 | 286 | 2.93e-55 | 205 |
| MS.gene06030.t1 | AT4G12020 | 55.801 | 181 | 77 | 1 | 338 | 518 | 91 | 268 | 6.61e-55 | 204 |
| MS.gene06030.t1 | AT4G12020 | 55.488 | 164 | 58 | 2 | 388 | 551 | 91 | 239 | 2.23e-49 | 187 |
| MS.gene06030.t1 | AT4G12020 | 51.163 | 86 | 42 | 0 | 259 | 344 | 212 | 297 | 4.49e-16 | 83.2 |
| MS.gene06030.t1 | AT4G12020 | 64.286 | 196 | 20 | 1 | 263 | 408 | 91 | 286 | 3.49e-71 | 252 |
| MS.gene06030.t1 | AT4G12020 | 51.256 | 199 | 94 | 1 | 313 | 511 | 91 | 286 | 2.93e-55 | 205 |
| MS.gene06030.t1 | AT4G12020 | 55.801 | 181 | 77 | 1 | 338 | 518 | 91 | 268 | 6.61e-55 | 204 |
| MS.gene06030.t1 | AT4G12020 | 55.488 | 164 | 58 | 2 | 388 | 551 | 91 | 239 | 2.23e-49 | 187 |
| MS.gene06030.t1 | AT4G12020 | 51.163 | 86 | 42 | 0 | 259 | 344 | 212 | 297 | 4.49e-16 | 83.2 |
| MS.gene06030.t1 | AT4G12020 | 64.286 | 196 | 20 | 1 | 263 | 408 | 91 | 286 | 3.56e-71 | 252 |
| MS.gene06030.t1 | AT4G12020 | 51.256 | 199 | 94 | 1 | 313 | 511 | 91 | 286 | 3.04e-55 | 205 |
| MS.gene06030.t1 | AT4G12020 | 55.801 | 181 | 77 | 1 | 338 | 518 | 91 | 268 | 6.79e-55 | 204 |
| MS.gene06030.t1 | AT4G12020 | 55.488 | 164 | 58 | 2 | 388 | 551 | 91 | 239 | 2.48e-49 | 187 |
| MS.gene06030.t1 | AT4G12020 | 51.163 | 86 | 42 | 0 | 259 | 344 | 212 | 297 | 4.50e-16 | 83.2 |
| MS.gene06030.t1 | AT4G12020 | 64.286 | 196 | 20 | 1 | 263 | 408 | 91 | 286 | 3.56e-71 | 252 |
| MS.gene06030.t1 | AT4G12020 | 51.256 | 199 | 94 | 1 | 313 | 511 | 91 | 286 | 3.04e-55 | 205 |
| MS.gene06030.t1 | AT4G12020 | 55.801 | 181 | 77 | 1 | 338 | 518 | 91 | 268 | 6.79e-55 | 204 |
| MS.gene06030.t1 | AT4G12020 | 55.488 | 164 | 58 | 2 | 388 | 551 | 91 | 239 | 2.48e-49 | 187 |
| MS.gene06030.t1 | AT4G12020 | 51.163 | 86 | 42 | 0 | 259 | 344 | 212 | 297 | 4.50e-16 | 83.2 |
| MS.gene06030.t1 | AT4G12020 | 64.286 | 196 | 20 | 1 | 263 | 408 | 91 | 286 | 1.40e-70 | 250 |
| MS.gene06030.t1 | AT4G12020 | 51.256 | 199 | 94 | 1 | 313 | 511 | 91 | 286 | 8.05e-55 | 203 |
| MS.gene06030.t1 | AT4G12020 | 55.801 | 181 | 77 | 1 | 338 | 518 | 91 | 268 | 1.87e-54 | 202 |
| MS.gene06030.t1 | AT4G12020 | 55.488 | 164 | 58 | 2 | 388 | 551 | 91 | 239 | 6.30e-49 | 186 |
| MS.gene06030.t1 | AT4G12020 | 51.163 | 86 | 42 | 0 | 259 | 344 | 212 | 297 | 8.07e-16 | 82.4 |
Find 240 sgRNAs with CRISPR-Local
Find 273 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCAAATGCATTCAAGATTT+TGG | 0.038940 | 4.1:+5038365 | MS.gene06030:CDS |
| AGTTCAGTCACCTGTATTTC+CGG | 0.238639 | 4.1:+5039041 | MS.gene06030:CDS |
| TCTTCCTTGTCACTTGGGCT+TGG | 0.250371 | 4.1:+5038552 | MS.gene06030:CDS |
| CTTCCTTGTCACTTGGGCTT+GGG | 0.284092 | 4.1:+5038553 | MS.gene06030:CDS |
| AATATTAGCTATACCTTTCC+TGG | 0.288365 | 4.1:-5040272 | None:intergenic |
| GTACTATGATCAAACTGTTT+TGG | 0.295535 | 4.1:-5038984 | None:intergenic |
| GGTTCATGGAGGTCTCTCTT+TGG | 0.301551 | 4.1:+5039991 | MS.gene06030:CDS |
| ATCACCTCTTCAATTGAATA+TGG | 0.303127 | 4.1:+5038827 | MS.gene06030:CDS |
| TGATCATAGTACCATTGTTC+TGG | 0.307891 | 4.1:+5038995 | MS.gene06030:CDS |
| GTTCATGGAGGTCTCTCTTT+GGG | 0.318655 | 4.1:+5039992 | MS.gene06030:CDS |
| GAAGGCGTCAAAGTTTGATT+TGG | 0.344020 | 4.1:+5038746 | MS.gene06030:CDS |
| GAAGTTGCTATGATGAAAAC+AGG | 0.345716 | 4.1:+5040082 | MS.gene06030:CDS |
| TCTCTCTTTGGGATCTCTTC+CGG | 0.350948 | 4.1:+5040003 | MS.gene06030:CDS |
| GGAATCAAGGTTCGGGCACT+TGG | 0.361395 | 4.1:+5038323 | MS.gene06030:CDS |
| GCATTTGCAGAATTATTAAC+AGG | 0.361846 | 4.1:-5038351 | None:intergenic |
| AGATGCTCGTGGGGCCATCC+TGG | 0.362835 | 4.1:+5039869 | MS.gene06030:CDS |
| AGGAAGTGGGATTTAATTGA+TGG | 0.363522 | 4.1:+5038507 | MS.gene06030:CDS |
| CCACCATGCACCCTGCCTTC+AGG | 0.364481 | 4.1:-5040202 | None:intergenic |
| TCCCTCAACTTGACATATCT+TGG | 0.368002 | 4.1:-5039105 | None:intergenic |
| GAGGAGTCATCTATGGATAT+TGG | 0.371371 | 4.1:+5038654 | MS.gene06030:CDS |
| GTGGACTAGTGCATGATAGA+AGG | 0.371772 | 4.1:+5039969 | MS.gene06030:CDS |
| GGCCATCCTGGGTCAGAATA+TGG | 0.377877 | 4.1:+5039881 | MS.gene06030:CDS |
| AACCATCATGGCTGCATCTT+CGG | 0.378023 | 4.1:-5039331 | None:intergenic |
| AGAGCTGCCAGAGGGAAATC+TGG | 0.378348 | 4.1:+5039359 | MS.gene06030:CDS |
| TCCCTTGCTGTCTGATGAGC+TGG | 0.380271 | 4.1:-5038583 | None:intergenic |
| GGTTGTTCTGCCATCTTTGA+AGG | 0.382315 | 4.1:+5038920 | MS.gene06030:CDS |
| GGACGTCGATGCCAAGTTGC+CGG | 0.384917 | 4.1:+5039479 | MS.gene06030:CDS |
| TGGAATCAACTGGTTTCTTA+AGG | 0.385905 | 4.1:-5038719 | None:intergenic |
| GTTCTGGACCACTCCTCAAC+TGG | 0.386337 | 4.1:+5039011 | MS.gene06030:CDS |
| GTTCAGTCACCTGTATTTCC+GGG | 0.386926 | 4.1:+5039042 | MS.gene06030:CDS |
| CTTCCTCTAGGGGATTAAAA+AGG | 0.387133 | 4.1:+5038487 | MS.gene06030:CDS |
| GTTGGCTCTTCCTTGTCACT+TGG | 0.393533 | 4.1:+5038546 | MS.gene06030:CDS |
| ATTTGCACTAAAAGTGTTCA+TGG | 0.399234 | 4.1:+5039659 | MS.gene06030:CDS |
| CTCCCTTAAGCCTTCCTCTA+GGG | 0.399976 | 4.1:+5038476 | MS.gene06030:CDS |
| GCTTGCACGGCTATGTCTTC+AGG | 0.400843 | 4.1:+5038618 | MS.gene06030:CDS |
| GCAATGCTGACTGCGGGTTC+CGG | 0.401969 | 4.1:+5040235 | MS.gene06030:CDS |
| ATCCCCTAGAGGAAGGCTTA+AGG | 0.405494 | 4.1:-5038479 | None:intergenic |
| ATGACATTGTAACCTTTGAT+TGG | 0.405535 | 4.1:-5040307 | None:intergenic |
| AGCCTGATTTAAAAGGAAAC+TGG | 0.407664 | 4.1:-5038961 | None:intergenic |
| TGTCGATGAGGAGTCATCTA+TGG | 0.407735 | 4.1:+5038647 | MS.gene06030:CDS |
| GCCTTCATGTTGGAATCAAC+TGG | 0.410455 | 4.1:-5038729 | None:intergenic |
| TGCATCTTCGGCCACCACCA+TGG | 0.411709 | 4.1:-5039319 | None:intergenic |
| TCCCCTAGAGGAAGGCTTAA+GGG | 0.414711 | 4.1:-5038478 | None:intergenic |
| CCCACCATGGCCCTTACAAA+AGG | 0.421011 | 4.1:-5039606 | None:intergenic |
| AAGAGTGCAGAAGGCCTATC+AGG | 0.422660 | 4.1:+5039434 | MS.gene06030:CDS |
| TGATAGGCCTTCTGCACTCT+TGG | 0.428670 | 4.1:-5039432 | None:intergenic |
| ACGTCATGCAGTTGGATGCC+GGG | 0.428792 | 4.1:+5038897 | MS.gene06030:CDS |
| CTGATCACTGTGTCCGCCAC+GGG | 0.431574 | 4.1:+5039762 | MS.gene06030:CDS |
| ACTAGCTTTAAATCCAACTC+TGG | 0.432143 | 4.1:-5040333 | None:intergenic |
| CGGGTGTACAAAAGGGGCAC+AGG | 0.432303 | 4.1:+5039499 | MS.gene06030:CDS |
| GGAAGTGGAGTTGATTATTA+CGG | 0.433532 | 4.1:+5038408 | MS.gene06030:CDS |
| AGTGACTGCCTTAGTTGATC+TGG | 0.434173 | 4.1:-5040043 | None:intergenic |
| CAAGTTGCCGGGTGTACAAA+AGG | 0.437892 | 4.1:+5039491 | MS.gene06030:CDS |
| GGGAAACGGTGTACAGCACC+AGG | 0.439285 | 4.1:+5039554 | MS.gene06030:CDS |
| GTGCATGATAGAAGGGTTCA+TGG | 0.441342 | 4.1:+5039977 | MS.gene06030:CDS |
| TCAGCTCCTTTGTGGCAGCC+AGG | 0.444314 | 4.1:-5039197 | None:intergenic |
| GGATTTAATTGATGGATGTA+TGG | 0.445292 | 4.1:+5038515 | MS.gene06030:CDS |
| TACGACCCTCAGCTCCTTTG+TGG | 0.447126 | 4.1:-5039205 | None:intergenic |
| GTGCTTGCACTTCATTTGCA+AGG | 0.449483 | 4.1:+5039918 | MS.gene06030:CDS |
| TACTGCAAGGCCCATGGAGG+AGG | 0.452493 | 4.1:+5039233 | MS.gene06030:CDS |
| ATGTGTTAGCCCGGAAATAC+AGG | 0.453746 | 4.1:-5039051 | None:intergenic |
| ACATCGCCTGCCTCCTCCAT+GGG | 0.456869 | 4.1:-5039243 | None:intergenic |
| GGCAGCTCTATGCAAGTTGA+AGG | 0.457201 | 4.1:+5038387 | MS.gene06030:CDS |
| AATATCTGACTCGCAGGGTC+TGG | 0.460127 | 4.1:-5038784 | None:intergenic |
| AACGTCATGCAGTTGGATGC+CGG | 0.461262 | 4.1:+5038896 | MS.gene06030:CDS |
| CAGTTGCTGTTCCTGAAGGC+AGG | 0.468610 | 4.1:+5040191 | MS.gene06030:CDS |
| CCTCCCTTAAGCCTTCCTCT+AGG | 0.469548 | 4.1:+5038475 | MS.gene06030:CDS |
| TTGGCTCTTCCTTGTCACTT+GGG | 0.470337 | 4.1:+5038547 | MS.gene06030:CDS |
| CACATCGCCTGCCTCCTCCA+TGG | 0.473804 | 4.1:-5039244 | None:intergenic |
| TCTTAATCTCGGCTGTGAAA+AGG | 0.483351 | 4.1:+5038689 | MS.gene06030:CDS |
| TTCTGTATTGCCCATGGTGG+TGG | 0.483500 | 4.1:+5039308 | MS.gene06030:CDS |
| GTTCCTGAAGGCAGGGTGCA+TGG | 0.486488 | 4.1:+5040199 | MS.gene06030:CDS |
| ATCTGACTCGCAGGGTCTGG+TGG | 0.490140 | 4.1:-5038781 | None:intergenic |
| AATGAAGTGCAAGCACCATC+TGG | 0.491086 | 4.1:-5039911 | None:intergenic |
| GATGCTCGTGGGGCCATCCT+GGG | 0.491299 | 4.1:+5039870 | MS.gene06030:CDS |
| CGTCATGCAGTTGGATGCCG+GGG | 0.491665 | 4.1:+5038898 | MS.gene06030:CDS |
| TGCTTGCACTTCATTTGCAA+GGG | 0.492502 | 4.1:+5039919 | MS.gene06030:CDS |
| AAGTTGCCGGGTGTACAAAA+GGG | 0.493444 | 4.1:+5039492 | MS.gene06030:CDS |
| GCAAGGCCCATGGAGGAGGC+AGG | 0.495511 | 4.1:+5039237 | MS.gene06030:CDS |
| GACGTCGATGCCAAGTTGCC+GGG | 0.497644 | 4.1:+5039480 | MS.gene06030:CDS |
| CTAGCTTTAAATCCAACTCT+GGG | 0.498134 | 4.1:-5040332 | None:intergenic |
| GGGTGCACTAAGGGTGCTGA+GGG | 0.498558 | 4.1:+5039575 | MS.gene06030:CDS |
| ACTCGCAGGGTCTGGTGGAA+AGG | 0.499410 | 4.1:-5038776 | None:intergenic |
| ATATGTCAAGTTGAGGGATG+TGG | 0.502452 | 4.1:+5039110 | MS.gene06030:CDS |
| GCATCTTCGGCCACCACCAT+GGG | 0.502879 | 4.1:-5039318 | None:intergenic |
| CAAGTTGAGGGATGTGGAAA+GGG | 0.503828 | 4.1:+5039116 | MS.gene06030:CDS |
| TAACCTTTGATTGGCATGGA+TGG | 0.503858 | 4.1:-5040298 | None:intergenic |
| TCCCTTAAGCCTTCCTCTAG+GGG | 0.504577 | 4.1:+5038477 | MS.gene06030:CDS |
| GGGTAAACGTTGTACCTACC+AGG | 0.506237 | 4.1:+5039628 | MS.gene06030:CDS |
| TCCAAGATATGTCAAGTTGA+GGG | 0.506429 | 4.1:+5039104 | MS.gene06030:CDS |
| GTGAGATGCAAAGACCTGAT+AGG | 0.509427 | 4.1:-5039448 | None:intergenic |
| ACTTGTAATATCTGACTCGC+AGG | 0.509539 | 4.1:-5038790 | None:intergenic |
| TACAGCACCAGGGTGCACTA+AGG | 0.514081 | 4.1:+5039565 | MS.gene06030:CDS |
| GGCTTGCTAGAACGAGGATC+CGG | 0.516038 | 4.1:-5040022 | None:intergenic |
| TTTGATGATGCCTTCAAAGA+TGG | 0.520047 | 4.1:-5038930 | None:intergenic |
| AAGGGAGCTAGAGGTGCCTC+TGG | 0.520812 | 4.1:+5039134 | MS.gene06030:CDS |
| AGGGAGGGGATCGAAGAACC+AGG | 0.521233 | 4.1:-5038459 | None:intergenic |
| AAGTTCAGCCGTGGCTTGCA+CGG | 0.521759 | 4.1:+5038605 | MS.gene06030:CDS |
| CCACCATGGCCCTTACAAAA+GGG | 0.522287 | 4.1:-5039605 | None:intergenic |
| ATTGTAACCTTTGATTGGCA+TGG | 0.522357 | 4.1:-5040302 | None:intergenic |
| CCTGGTGCTTGTAACACTAC+CGG | 0.522961 | 4.1:-5040254 | None:intergenic |
| GGGTGTACAAAAGGGGCACA+GGG | 0.524313 | 4.1:+5039500 | MS.gene06030:CDS |
| GTCATCTATGGATATTGGAC+TGG | 0.524479 | 4.1:+5038659 | MS.gene06030:CDS |
| AAGTGCAAGCACCATCTGGC+TGG | 0.524862 | 4.1:-5039907 | None:intergenic |
| GGAAAGAGGTGTGCTGTAGC+AGG | 0.524944 | 4.1:+5039713 | MS.gene06030:CDS |
| TAGAGGAAGGCTTAAGGGAG+GGG | 0.526671 | 4.1:-5038473 | None:intergenic |
| TAGTGCAAATTCCACCTCCC+TGG | 0.528025 | 4.1:-5039646 | None:intergenic |
| TCAAGTTGAGGGATGTGGAA+AGG | 0.528931 | 4.1:+5039115 | MS.gene06030:CDS |
| ATGTCAGTTGCTGTTCCTGA+AGG | 0.530573 | 4.1:+5040187 | MS.gene06030:CDS |
| TGACTTCTGCAAGGCACATG+GGG | 0.531036 | 4.1:+5039838 | MS.gene06030:CDS |
| GGCTGCCACAAAGGAGCTGA+GGG | 0.532759 | 4.1:+5039200 | MS.gene06030:CDS |
| CTAGCAAGCCAGATCAACTA+AGG | 0.533431 | 4.1:+5040035 | MS.gene06030:CDS |
| ATATTCAATTGAAGAGGTGA+TGG | 0.533489 | 4.1:-5038825 | None:intergenic |
| ACCATGTGCCACACAAAAGT+TGG | 0.533575 | 4.1:-5039687 | None:intergenic |
| ATGTTGCGACTTGATTCCCC+TGG | 0.533628 | 4.1:+5038441 | MS.gene06030:CDS |
| AGGGATCAACGTCATGCAGT+TGG | 0.540136 | 4.1:+5038889 | MS.gene06030:CDS |
| AGGGTGCACTAAGGGTGCTG+AGG | 0.541546 | 4.1:+5039574 | MS.gene06030:CDS |
| CTGACTTCTGCAAGGCACAT+GGG | 0.542177 | 4.1:+5039837 | MS.gene06030:CDS |
| CTGGACTTCACTCTTAATCT+CGG | 0.543442 | 4.1:+5038678 | MS.gene06030:CDS |
| CCGGTAGTGTTACAAGCACC+AGG | 0.545743 | 4.1:+5040254 | MS.gene06030:CDS |
| GGCAAGAGATGCAAGTCTGA+AGG | 0.547591 | 4.1:+5039788 | MS.gene06030:CDS |
| TCAGGAACAGCAACTGACAT+AGG | 0.550215 | 4.1:-5040184 | None:intergenic |
| CGTGCCTCAGCTGACGAAGG+TGG | 0.553413 | 4.1:+5040154 | MS.gene06030:CDS |
| CTGCTGCTGATGTGTTAGCC+CGG | 0.556455 | 4.1:-5039060 | None:intergenic |
| ACAATGTCATGCCCCAGAGT+TGG | 0.557436 | 4.1:+5040320 | MS.gene06030:CDS |
| ACAGTGATCAGTCCTTCCTC+TGG | 0.558391 | 4.1:-5039750 | None:intergenic |
| TTCCAAGATATGTCAAGTTG+AGG | 0.558535 | 4.1:+5039103 | MS.gene06030:CDS |
| GGCTGCACAAAGAGTGCCAG+AGG | 0.559574 | 4.1:+5039734 | MS.gene06030:CDS |
| CGTTGTACCTACCAGGGAGG+TGG | 0.559576 | 4.1:+5039635 | MS.gene06030:CDS |
| AAACTTTGACGCCTTCATGT+TGG | 0.560085 | 4.1:-5038739 | None:intergenic |
| GGGAGGCAAGAGATGCTCGT+GGG | 0.560675 | 4.1:+5039859 | MS.gene06030:CDS |
| ACCAGTTGATTCCAACATGA+AGG | 0.563672 | 4.1:+5038728 | MS.gene06030:CDS |
| GCAAGTTCAAGTTGGTTCAA+CGG | 0.565448 | 4.1:-5040124 | None:intergenic |
| TCAGCACCCTTAGTGCACCC+TGG | 0.567638 | 4.1:-5039572 | None:intergenic |
| ACTGACTTCTGCAAGGCACA+TGG | 0.568479 | 4.1:+5039836 | MS.gene06030:CDS |
| ACCGTGTACTGCAAGGCCCA+TGG | 0.568942 | 4.1:+5039227 | MS.gene06030:CDS |
| GGTCTGTGTGCACTTCATAG+TGG | 0.569292 | 4.1:+5039950 | MS.gene06030:CDS |
| TGGCACATGGTGGTGGAAAG+AGG | 0.569520 | 4.1:+5039699 | MS.gene06030:CDS |
| CAGCTCTAGAACAACCATCA+TGG | 0.571808 | 4.1:-5039343 | None:intergenic |
| GGAGGCAAGAGATGCTCGTG+GGG | 0.571845 | 4.1:+5039860 | MS.gene06030:CDS |
| CAGAAACCTGGCTGCCACAA+AGG | 0.572206 | 4.1:+5039191 | MS.gene06030:CDS |
| CTGATGGCAATGCTGACTGC+GGG | 0.574064 | 4.1:+5040229 | MS.gene06030:CDS |
| TGGACTAGTGCATGATAGAA+GGG | 0.574307 | 4.1:+5039970 | MS.gene06030:CDS |
| TGGCTGCCACAAAGGAGCTG+AGG | 0.574447 | 4.1:+5039199 | MS.gene06030:CDS |
| AATTGTACCAAGAGTGCAGA+AGG | 0.576199 | 4.1:+5039425 | MS.gene06030:CDS |
| ATCTCCATATTCAATTGAAG+AGG | 0.576904 | 4.1:-5038831 | None:intergenic |
| GAGATGACATCAGTATTTAG+TGG | 0.578908 | 4.1:+5038849 | MS.gene06030:CDS |
| GTATATCTCATGGTGGTGGT+AGG | 0.578928 | 4.1:+5039162 | MS.gene06030:CDS |
| AGATGCAAGTCTGAAGGGTG+TGG | 0.579661 | 4.1:+5039794 | MS.gene06030:CDS |
| TGCCATATTCTGACCCAGGA+TGG | 0.581438 | 4.1:-5039883 | None:intergenic |
| ACCATGTGCTTTGCAAAACA+TGG | 0.587102 | 4.1:-5039528 | None:intergenic |
| AACCAGCTCATCAGACAGCA+AGG | 0.588229 | 4.1:+5038581 | MS.gene06030:CDS |
| AGTTGCTGTTCCTGAAGGCA+GGG | 0.588767 | 4.1:+5040192 | MS.gene06030:CDS |
| GATCCATCCATGCCAATCAA+AGG | 0.589332 | 4.1:+5040295 | MS.gene06030:CDS |
| GACATATCTTGGAATTACCA+TGG | 0.590843 | 4.1:-5039094 | None:intergenic |
| GAATCAAGGTTCGGGCACTT+GGG | 0.591372 | 4.1:+5038324 | MS.gene06030:CDS |
| ACTGATCACTGTGTCCGCCA+CGG | 0.592038 | 4.1:+5039761 | MS.gene06030:CDS |
| TGGGACACAAAATGCAGATG+AGG | 0.592583 | 4.1:+5038869 | MS.gene06030:CDS |
| ACAGCACCAGGGTGCACTAA+GGG | 0.592721 | 4.1:+5039566 | MS.gene06030:CDS |
| ACAGATTTCTGTATTGCCCA+TGG | 0.595860 | 4.1:+5039302 | MS.gene06030:CDS |
| GGCCGAAGATGCAGCCATGA+TGG | 0.598651 | 4.1:+5039329 | MS.gene06030:CDS |
| GCAAGAGATGCAAGTCTGAA+GGG | 0.600495 | 4.1:+5039789 | MS.gene06030:CDS |
| GCACAAAGAGTGCCAGAGGA+AGG | 0.600748 | 4.1:+5039738 | MS.gene06030:CDS |
| GGTTGCACTAAGAGTGCAGA+AGG | 0.600927 | 4.1:+5039275 | MS.gene06030:CDS |
| AGACATAGCCGTGCAAGCCA+CGG | 0.601556 | 4.1:-5038613 | None:intergenic |
| GGCAGGCGATGTGAATACCT+TGG | 0.601779 | 4.1:+5039254 | MS.gene06030:CDS |
| TCCATGGGCCTTGCAGTACA+CGG | 0.602914 | 4.1:-5039228 | None:intergenic |
| GGGACACAAAATGCAGATGA+GGG | 0.603139 | 4.1:+5038870 | MS.gene06030:CDS |
| AGATGACATCAGTATTTAGT+GGG | 0.603686 | 4.1:+5038850 | MS.gene06030:CDS |
| CTAGAGGAAGGCTTAAGGGA+GGG | 0.604400 | 4.1:-5038474 | None:intergenic |
| GCTCGTGCCTCAGCTGACGA+AGG | 0.604563 | 4.1:+5040151 | MS.gene06030:CDS |
| ACACAGTCCAGATTTCCCTC+TGG | 0.604637 | 4.1:-5039366 | None:intergenic |
| TCAGGTCTTTGCATCTCACA+TGG | 0.605373 | 4.1:+5039452 | MS.gene06030:CDS |
| GAGCACTTGCAAGTTCAAGT+TGG | 0.607190 | 4.1:-5040132 | None:intergenic |
| GGATGTGGAAAGGGAGCTAG+AGG | 0.607991 | 4.1:+5039125 | MS.gene06030:CDS |
| AGTTGCCGGGTGTACAAAAG+GGG | 0.608763 | 4.1:+5039493 | MS.gene06030:CDS |
| ACGCCCAAGCCCAAGTGACA+AGG | 0.609142 | 4.1:-5038556 | None:intergenic |
| CAGCAGCCACCACATCGCCA+TGG | 0.609677 | 4.1:+5039077 | MS.gene06030:CDS |
| AGTGTTACAAGCACCAGGAA+AGG | 0.609796 | 4.1:+5040259 | MS.gene06030:CDS |
| AAAGATGGCAGAACAACCCC+CGG | 0.610306 | 4.1:-5038915 | None:intergenic |
| TCTATGCAAGTTGAAGGAAG+TGG | 0.610625 | 4.1:+5038393 | MS.gene06030:CDS |
| CTTTGCATCTCACATGGAGG+AGG | 0.612278 | 4.1:+5039458 | MS.gene06030:CDS |
| CTGTGTATCCGACATGGTGG+TGG | 0.614601 | 4.1:+5039383 | MS.gene06030:CDS |
| GGGTCGTACCGTGTACTGCA+AGG | 0.614735 | 4.1:+5039220 | MS.gene06030:CDS |
| TCTGGACGTTGTATATCTCA+TGG | 0.616262 | 4.1:+5039152 | MS.gene06030:CDS |
| TGATCACTGTGTCCGCCACG+GGG | 0.616657 | 4.1:+5039763 | MS.gene06030:CDS |
| GAATATGGCATCCAGCCAGA+TGG | 0.617677 | 4.1:+5039896 | MS.gene06030:CDS |
| GATTTCTGTATTGCCCATGG+TGG | 0.622924 | 4.1:+5039305 | MS.gene06030:CDS |
| ACCTCTTGCCACCACCATGT+CGG | 0.623482 | 4.1:-5039391 | None:intergenic |
| GCTATGATGAAAACAGGGAG+TGG | 0.624221 | 4.1:+5040088 | MS.gene06030:CDS |
| GGGGAGGCAAGAGATGCTCG+TGG | 0.625915 | 4.1:+5039858 | MS.gene06030:CDS |
| GGGAGGGGATCGAAGAACCA+GGG | 0.625953 | 4.1:-5038458 | None:intergenic |
| GCAAATTCCACCTCCCTGGT+AGG | 0.627159 | 4.1:-5039642 | None:intergenic |
| TCCGACATGGTGGTGGCAAG+AGG | 0.627739 | 4.1:+5039390 | MS.gene06030:CDS |
| GCTTGCACTTCATTTGCAAG+GGG | 0.628208 | 4.1:+5039920 | MS.gene06030:CDS |
| CTGCACTCTTAGTGCAACCA+AGG | 0.631734 | 4.1:-5039271 | None:intergenic |
| GGGTGTGGAAAGAGTGCACA+AGG | 0.631845 | 4.1:+5039809 | MS.gene06030:CDS |
| GGTGCATGGTGGAAGTCTGA+TGG | 0.633544 | 4.1:+5040213 | MS.gene06030:CDS |
| GTGACCACCTTCGTCAGCTG+AGG | 0.634705 | 4.1:-5040158 | None:intergenic |
| GTCACTCTTTGACAGAGACA+TGG | 0.635212 | 4.1:+5040060 | MS.gene06030:CDS |
| CTTGCACTTCATTTGCAAGG+GGG | 0.635499 | 4.1:+5039921 | MS.gene06030:CDS |
| CGTTGTATATCTCATGGTGG+TGG | 0.637546 | 4.1:+5039158 | MS.gene06030:CDS |
| TGAGGAGTGGTCCAGAACAA+TGG | 0.637889 | 4.1:-5039006 | None:intergenic |
| TTTGCAAAGCACATGGTGGG+GGG | 0.639645 | 4.1:+5039534 | MS.gene06030:CDS |
| TCTGATGGCAATGCTGACTG+CGG | 0.639859 | 4.1:+5040228 | MS.gene06030:CDS |
| GGATGTATGGATCAGACAGT+TGG | 0.642328 | 4.1:+5038528 | MS.gene06030:CDS |
| GGTAGGAGATGTCAGAAACC+TGG | 0.642976 | 4.1:+5039179 | MS.gene06030:CDS |
| GCACTAAGAGTGCAGAAGGA+CGG | 0.644244 | 4.1:+5039279 | MS.gene06030:CDS |
| GAATTACCATGGCGATGTGG+TGG | 0.645366 | 4.1:-5039083 | None:intergenic |
| TGGATGCCATATTCTGACCC+AGG | 0.646701 | 4.1:-5039887 | None:intergenic |
| GGAGGGGATCGAAGAACCAG+GGG | 0.647035 | 4.1:-5038457 | None:intergenic |
| ACCAGCTCATCAGACAGCAA+GGG | 0.662114 | 4.1:+5038582 | MS.gene06030:CDS |
| CAGCAAGGGAAGTTCAGCCG+TGG | 0.664597 | 4.1:+5038596 | MS.gene06030:CDS |
| AGGTAGCACTGACTTCTGCA+AGG | 0.665819 | 4.1:+5039829 | MS.gene06030:CDS |
| TGATCTGGCTTGCTAGAACG+AGG | 0.675573 | 4.1:-5040028 | None:intergenic |
| CCTAGAGGAAGGCTTAAGGG+AGG | 0.678806 | 4.1:-5038475 | None:intergenic |
| CTTGTAATATCTGACTCGCA+GGG | 0.686506 | 4.1:-5038789 | None:intergenic |
| GGTGTACAAAAGGGGCACAG+GGG | 0.687449 | 4.1:+5039501 | MS.gene06030:CDS |
| GGAAACGGTGTACAGCACCA+GGG | 0.690912 | 4.1:+5039555 | MS.gene06030:CDS |
| GTTGTTCTAGAGCTGCCAGA+GGG | 0.691652 | 4.1:+5039351 | MS.gene06030:CDS |
| ATGAGATATACAACGTCCAG+AGG | 0.694200 | 4.1:-5039150 | None:intergenic |
| GGTGCACTAAGGGTGCTGAG+GGG | 0.695358 | 4.1:+5039576 | MS.gene06030:CDS |
| TTCAGGCAAAGATGTCGATG+AGG | 0.696089 | 4.1:+5038635 | MS.gene06030:CDS |
| TTGGAATTACCATGGCGATG+TGG | 0.708301 | 4.1:-5039086 | None:intergenic |
| GACTTCTGCAAGGCACATGG+GGG | 0.708581 | 4.1:+5039839 | MS.gene06030:CDS |
| GGTTGTTCTAGAGCTGCCAG+AGG | 0.709848 | 4.1:+5039350 | MS.gene06030:CDS |
| AAGTTGCTATGATGAAAACA+GGG | 0.710212 | 4.1:+5040083 | MS.gene06030:CDS |
| GGTAAACGTTGTACCTACCA+GGG | 0.711545 | 4.1:+5039629 | MS.gene06030:CDS |
| GTCATGCAGTTGGATGCCGG+GGG | 0.714038 | 4.1:+5038899 | MS.gene06030:CDS |
| TGCACTAAAAGTGTTCATGG+AGG | 0.720936 | 4.1:+5039662 | MS.gene06030:CDS |
| TAGCTTTAAATCCAACTCTG+GGG | 0.723359 | 4.1:-5040331 | None:intergenic |
| TCTGGACTGTGTATCCGACA+TGG | 0.731716 | 4.1:+5039377 | MS.gene06030:CDS |
| GGTCTTTGCATCTCACATGG+AGG | 0.737586 | 4.1:+5039455 | MS.gene06030:CDS |
| GTGTACTGCAAGGCCCATGG+AGG | 0.739583 | 4.1:+5039230 | MS.gene06030:CDS |
| GATCACTGTGTCCGCCACGG+GGG | 0.739705 | 4.1:+5039764 | MS.gene06030:CDS |
| CCTGAAGGCAGGGTGCATGG+TGG | 0.743673 | 4.1:+5040202 | MS.gene06030:CDS |
| GGACGTTGTATATCTCATGG+TGG | 0.749062 | 4.1:+5039155 | MS.gene06030:CDS |
| GGACTGTGTATCCGACATGG+TGG | 0.766646 | 4.1:+5039380 | MS.gene06030:CDS |
| AAACGTTGTACCTACCAGGG+AGG | 0.777869 | 4.1:+5039632 | MS.gene06030:CDS |
| CATGATAGAAGGGTTCATGG+AGG | 0.784890 | 4.1:+5039980 | MS.gene06030:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| AAGTTGCTATGATGAAAACA+GGG | + | chr4.1:5040083-5040102 | MS.gene06030:CDS | 30.0% | |
| AATATTAGCTATACCTTTCC+TGG | - | chr4.1:5040275-5040294 | None:intergenic | 30.0% | |
| AGATGACATCAGTATTTAGT+GGG | + | chr4.1:5038850-5038869 | MS.gene06030:CDS | 30.0% | |
| ATATTCAATTGAAGAGGTGA+TGG | - | chr4.1:5038828-5038847 | None:intergenic | 30.0% | |
| ATCACCTCTTCAATTGAATA+TGG | + | chr4.1:5038827-5038846 | MS.gene06030:CDS | 30.0% | |
| ATCTCCATATTCAATTGAAG+AGG | - | chr4.1:5038834-5038853 | None:intergenic | 30.0% | |
| ATGACATTGTAACCTTTGAT+TGG | - | chr4.1:5040310-5040329 | None:intergenic | 30.0% | |
| GCATTTGCAGAATTATTAAC+AGG | - | chr4.1:5038354-5038373 | None:intergenic | 30.0% | |
| ! | GCAAATGCATTCAAGATTTT+GGG | + | chr4.1:5038366-5038385 | MS.gene06030:CDS | 30.0% |
| ! | GGATTTAATTGATGGATGTA+TGG | + | chr4.1:5038515-5038534 | MS.gene06030:CDS | 30.0% |
| ! | GTACTATGATCAAACTGTTT+TGG | - | chr4.1:5038987-5039006 | None:intergenic | 30.0% |
| ! | TGCAAATGCATTCAAGATTT+TGG | + | chr4.1:5038365-5038384 | MS.gene06030:CDS | 30.0% |
| !! | ATTTGCACTAAAAGTGTTCA+TGG | + | chr4.1:5039659-5039678 | MS.gene06030:CDS | 30.0% |
| AGCCTGATTTAAAAGGAAAC+TGG | - | chr4.1:5038964-5038983 | None:intergenic | 35.0% | |
| AGGAAGTGGGATTTAATTGA+TGG | + | chr4.1:5038507-5038526 | MS.gene06030:CDS | 35.0% | |
| ATTGTAACCTTTGATTGGCA+TGG | - | chr4.1:5040305-5040324 | None:intergenic | 35.0% | |
| GAAGTTGCTATGATGAAAAC+AGG | + | chr4.1:5040082-5040101 | MS.gene06030:CDS | 35.0% | |
| GACATATCTTGGAATTACCA+TGG | - | chr4.1:5039097-5039116 | None:intergenic | 35.0% | |
| GAGATGACATCAGTATTTAG+TGG | + | chr4.1:5038849-5038868 | MS.gene06030:CDS | 35.0% | |
| TAGGGGATTAAAAAGGAAGT+GGG | + | chr4.1:5038494-5038513 | MS.gene06030:CDS | 35.0% | |
| TGATCATAGTACCATTGTTC+TGG | + | chr4.1:5038995-5039014 | MS.gene06030:CDS | 35.0% | |
| ! | ATACAGGTGACTGAACTTTT+TGG | - | chr4.1:5039038-5039057 | None:intergenic | 35.0% |
| ! | GACCAGTTTCCTTTTAAATC+AGG | + | chr4.1:5038959-5038978 | MS.gene06030:CDS | 35.0% |
| ! | GGAAGTGGAGTTGATTATTA+CGG | + | chr4.1:5038408-5038427 | MS.gene06030:CDS | 35.0% |
| ! | TCTTGGTACAATTTTCTCTC+TGG | - | chr4.1:5039418-5039437 | None:intergenic | 35.0% |
| ! | TGGAATCAACTGGTTTCTTA+AGG | - | chr4.1:5038722-5038741 | None:intergenic | 35.0% |
| ! | TTCCAAGATATGTCAAGTTG+AGG | + | chr4.1:5039103-5039122 | MS.gene06030:CDS | 35.0% |
| !! | TCCAAGATATGTCAAGTTGA+GGG | + | chr4.1:5039104-5039123 | MS.gene06030:CDS | 35.0% |
| !! | TTTGATGATGCCTTCAAAGA+TGG | - | chr4.1:5038933-5038952 | None:intergenic | 35.0% |
| !!! | GTTTTGGAGCCTGATTTAAA+AGG | - | chr4.1:5038971-5038990 | None:intergenic | 35.0% |
| AAACTTTGACGCCTTCATGT+TGG | - | chr4.1:5038742-5038761 | None:intergenic | 40.0% | |
| ACAGATTTCTGTATTGCCCA+TGG | + | chr4.1:5039302-5039321 | MS.gene06030:CDS | 40.0% | |
| ACCATGTGCTTTGCAAAACA+TGG | - | chr4.1:5039531-5039550 | None:intergenic | 40.0% | |
| AGTTCAGTCACCTGTATTTC+CGG | + | chr4.1:5039041-5039060 | MS.gene06030:CDS | 40.0% | |
| ATGAGATATACAACGTCCAG+AGG | - | chr4.1:5039153-5039172 | None:intergenic | 40.0% | |
| CTAGGGGATTAAAAAGGAAG+TGG | + | chr4.1:5038493-5038512 | MS.gene06030:CDS | 40.0% | |
| CTGGACTTCACTCTTAATCT+CGG | + | chr4.1:5038678-5038697 | MS.gene06030:CDS | 40.0% | |
| GAGGAGTCATCTATGGATAT+TGG | + | chr4.1:5038654-5038673 | MS.gene06030:CDS | 40.0% | |
| GTCATCTATGGATATTGGAC+TGG | + | chr4.1:5038659-5038678 | MS.gene06030:CDS | 40.0% | |
| TAACCTTTGATTGGCATGGA+TGG | - | chr4.1:5040301-5040320 | None:intergenic | 40.0% | |
| TCCCTCAACTTGACATATCT+TGG | - | chr4.1:5039108-5039127 | None:intergenic | 40.0% | |
| TCTGGACGTTGTATATCTCA+TGG | + | chr4.1:5039152-5039171 | MS.gene06030:CDS | 40.0% | |
| TCTTAATCTCGGCTGTGAAA+AGG | + | chr4.1:5038689-5038708 | MS.gene06030:CDS | 40.0% | |
| TGCTTGCACTTCATTTGCAA+GGG | + | chr4.1:5039919-5039938 | MS.gene06030:CDS | 40.0% | |
| ! | AATTGTACCAAGAGTGCAGA+AGG | + | chr4.1:5039425-5039444 | MS.gene06030:CDS | 40.0% |
| ! | ACCAGTTGATTCCAACATGA+AGG | + | chr4.1:5038728-5038747 | MS.gene06030:CDS | 40.0% |
| ! | ACCATGTTTTGCAAAGCACA+TGG | + | chr4.1:5039527-5039546 | MS.gene06030:CDS | 40.0% |
| ! | ACTTGTAATATCTGACTCGC+AGG | - | chr4.1:5038793-5038812 | None:intergenic | 40.0% |
| ! | ATGTTTTGCAAAGCACATGG+TGG | + | chr4.1:5039530-5039549 | MS.gene06030:CDS | 40.0% |
| ! | CTTCCTCTAGGGGATTAAAA+AGG | + | chr4.1:5038487-5038506 | MS.gene06030:CDS | 40.0% |
| ! | CTTCCTTTTTAATCCCCTAG+AGG | - | chr4.1:5038493-5038512 | None:intergenic | 40.0% |
| ! | CTTGTAATATCTGACTCGCA+GGG | - | chr4.1:5038792-5038811 | None:intergenic | 40.0% |
| ! | CTTTTTAATCCCCTAGAGGA+AGG | - | chr4.1:5038489-5038508 | None:intergenic | 40.0% |
| ! | TCTATGCAAGTTGAAGGAAG+TGG | + | chr4.1:5038393-5038412 | MS.gene06030:CDS | 40.0% |
| ! | TGTTTTGCAAAGCACATGGT+GGG | + | chr4.1:5039531-5039550 | MS.gene06030:CDS | 40.0% |
| !! | ATATGTCAAGTTGAGGGATG+TGG | + | chr4.1:5039110-5039129 | MS.gene06030:CDS | 40.0% |
| !! | GAAGGCGTCAAAGTTTGATT+TGG | + | chr4.1:5038746-5038765 | MS.gene06030:CDS | 40.0% |
| !! | GCAAGTTCAAGTTGGTTCAA+CGG | - | chr4.1:5040127-5040146 | None:intergenic | 40.0% |
| !! | TGAACTTTTTGGTCCAGTTG+AGG | - | chr4.1:5039027-5039046 | None:intergenic | 40.0% |
| !! | TGCACTAAAAGTGTTCATGG+AGG | + | chr4.1:5039662-5039681 | MS.gene06030:CDS | 40.0% |
| !! | TGGACTAGTGCATGATAGAA+GGG | + | chr4.1:5039970-5039989 | MS.gene06030:CDS | 40.0% |
| AACCATCATGGCTGCATCTT+CGG | - | chr4.1:5039334-5039353 | None:intergenic | 45.0% | |
| AAGTTGCCGGGTGTACAAAA+GGG | + | chr4.1:5039492-5039511 | MS.gene06030:CDS | 45.0% | |
| AATGAAGTGCAAGCACCATC+TGG | - | chr4.1:5039914-5039933 | None:intergenic | 45.0% | |
| ACCATGTGCCACACAAAAGT+TGG | - | chr4.1:5039690-5039709 | None:intergenic | 45.0% | |
| AGTGACTGCCTTAGTTGATC+TGG | - | chr4.1:5040046-5040065 | None:intergenic | 45.0% | |
| AGTGTTACAAGCACCAGGAA+AGG | + | chr4.1:5040259-5040278 | MS.gene06030:CDS | 45.0% | |
| ATGTGTTAGCCCGGAAATAC+AGG | - | chr4.1:5039054-5039073 | None:intergenic | 45.0% | |
| CATGATAGAAGGGTTCATGG+AGG | + | chr4.1:5039980-5039999 | MS.gene06030:CDS | 45.0% | |
| CGTTGTATATCTCATGGTGG+TGG | + | chr4.1:5039158-5039177 | MS.gene06030:CDS | 45.0% | |
| CTAGCAAGCCAGATCAACTA+AGG | + | chr4.1:5040035-5040054 | MS.gene06030:CDS | 45.0% | |
| CTTGCACTTCATTTGCAAGG+GGG | + | chr4.1:5039921-5039940 | MS.gene06030:CDS | 45.0% | |
| GAGCACTTGCAAGTTCAAGT+TGG | - | chr4.1:5040135-5040154 | None:intergenic | 45.0% | |
| GATCCATCCATGCCAATCAA+AGG | + | chr4.1:5040295-5040314 | MS.gene06030:CDS | 45.0% | |
| GATTTCTGTATTGCCCATGG+TGG | + | chr4.1:5039305-5039324 | MS.gene06030:CDS | 45.0% | |
| GCAAGAGATGCAAGTCTGAA+GGG | + | chr4.1:5039789-5039808 | MS.gene06030:CDS | 45.0% | |
| GCCTTCATGTTGGAATCAAC+TGG | - | chr4.1:5038732-5038751 | None:intergenic | 45.0% | |
| GCTATGATGAAAACAGGGAG+TGG | + | chr4.1:5040088-5040107 | MS.gene06030:CDS | 45.0% | |
| GCTTGCACTTCATTTGCAAG+GGG | + | chr4.1:5039920-5039939 | MS.gene06030:CDS | 45.0% | |
| GGACGTTGTATATCTCATGG+TGG | + | chr4.1:5039155-5039174 | MS.gene06030:CDS | 45.0% | |
| GGATGTATGGATCAGACAGT+TGG | + | chr4.1:5038528-5038547 | MS.gene06030:CDS | 45.0% | |
| GGGACACAAAATGCAGATGA+GGG | + | chr4.1:5038870-5038889 | MS.gene06030:CDS | 45.0% | |
| GGTAAACGTTGTACCTACCA+GGG | + | chr4.1:5039629-5039648 | MS.gene06030:CDS | 45.0% | |
| GGTTGTTCTGCCATCTTTGA+AGG | + | chr4.1:5038920-5038939 | MS.gene06030:CDS | 45.0% | |
| GTCACTCTTTGACAGAGACA+TGG | + | chr4.1:5040060-5040079 | MS.gene06030:CDS | 45.0% | |
| GTGAGATGCAAAGACCTGAT+AGG | - | chr4.1:5039451-5039470 | None:intergenic | 45.0% | |
| GTGCATGATAGAAGGGTTCA+TGG | + | chr4.1:5039977-5039996 | MS.gene06030:CDS | 45.0% | |
| GTGCTTGCACTTCATTTGCA+AGG | + | chr4.1:5039918-5039937 | MS.gene06030:CDS | 45.0% | |
| GTTCAGTCACCTGTATTTCC+GGG | + | chr4.1:5039042-5039061 | MS.gene06030:CDS | 45.0% | |
| GTTCATGGAGGTCTCTCTTT+GGG | + | chr4.1:5039992-5040011 | MS.gene06030:CDS | 45.0% | |
| TCAGGAACAGCAACTGACAT+AGG | - | chr4.1:5040187-5040206 | None:intergenic | 45.0% | |
| TCAGGTCTTTGCATCTCACA+TGG | + | chr4.1:5039452-5039471 | MS.gene06030:CDS | 45.0% | |
| TCATTTGCAAGGGGGAAAAC+AGG | + | chr4.1:5039929-5039948 | MS.gene06030:CDS | 45.0% | |
| TGGGACACAAAATGCAGATG+AGG | + | chr4.1:5038869-5038888 | MS.gene06030:CDS | 45.0% | |
| TGTCGATGAGGAGTCATCTA+TGG | + | chr4.1:5038647-5038666 | MS.gene06030:CDS | 45.0% | |
| TTCAGGCAAAGATGTCGATG+AGG | + | chr4.1:5038635-5038654 | MS.gene06030:CDS | 45.0% | |
| TTGGAATTACCATGGCGATG+TGG | - | chr4.1:5039089-5039108 | None:intergenic | 45.0% | |
| ! | AACTTTTGTGTGGCACATGG+TGG | + | chr4.1:5039689-5039708 | MS.gene06030:CDS | 45.0% |
| ! | ACCAACTTTTGTGTGGCACA+TGG | + | chr4.1:5039686-5039705 | MS.gene06030:CDS | 45.0% |
| ! | ATGTCAGTTGCTGTTCCTGA+AGG | + | chr4.1:5040187-5040206 | MS.gene06030:CDS | 45.0% |
| ! | CAAGTTGAGGGATGTGGAAA+GGG | + | chr4.1:5039116-5039135 | MS.gene06030:CDS | 45.0% |
| ! | GTTTTGCAAAGCACATGGTG+GGG | + | chr4.1:5039532-5039551 | MS.gene06030:CDS | 45.0% |
| ! | TTGGCTCTTCCTTGTCACTT+GGG | + | chr4.1:5038547-5038566 | MS.gene06030:CDS | 45.0% |
| ! | TTTTGCAAAGCACATGGTGG+GGG | + | chr4.1:5039533-5039552 | MS.gene06030:CDS | 45.0% |
| !! | CAGCTCTAGAACAACCATCA+TGG | - | chr4.1:5039346-5039365 | None:intergenic | 45.0% |
| !! | GTATATCTCATGGTGGTGGT+AGG | + | chr4.1:5039162-5039181 | MS.gene06030:CDS | 45.0% |
| !! | GTGGACTAGTGCATGATAGA+AGG | + | chr4.1:5039969-5039988 | MS.gene06030:CDS | 45.0% |
| !! | TCAAGTTGAGGGATGTGGAA+AGG | + | chr4.1:5039115-5039134 | MS.gene06030:CDS | 45.0% |
| !! | TCTCTCTTTGGGATCTCTTC+CGG | + | chr4.1:5040003-5040022 | MS.gene06030:CDS | 45.0% |
| !! | TTTTTGGTCCAGTTGAGGAG+TGG | - | chr4.1:5039022-5039041 | None:intergenic | 45.0% |
| !!! | TGGAGGTACCAACTTTTGTG+TGG | + | chr4.1:5039679-5039698 | MS.gene06030:CDS | 45.0% |
| AAACGTTGTACCTACCAGGG+AGG | + | chr4.1:5039632-5039651 | MS.gene06030:CDS | 50.0% | |
| AAAGATGGCAGAACAACCCC+CGG | - | chr4.1:5038918-5038937 | None:intergenic | 50.0% | |
| AACCAGCTCATCAGACAGCA+AGG | + | chr4.1:5038581-5038600 | MS.gene06030:CDS | 50.0% | |
| AACGTCATGCAGTTGGATGC+CGG | + | chr4.1:5038896-5038915 | MS.gene06030:CDS | 50.0% | |
| ACAATGTCATGCCCCAGAGT+TGG | + | chr4.1:5040320-5040339 | MS.gene06030:CDS | 50.0% | |
| ACACAGTCCAGATTTCCCTC+TGG | - | chr4.1:5039369-5039388 | None:intergenic | 50.0% | |
| ACAGTGATCAGTCCTTCCTC+TGG | - | chr4.1:5039753-5039772 | None:intergenic | 50.0% | |
| ACCAGCTCATCAGACAGCAA+GGG | + | chr4.1:5038582-5038601 | MS.gene06030:CDS | 50.0% | |
| AGATGCAAGTCTGAAGGGTG+TGG | + | chr4.1:5039794-5039813 | MS.gene06030:CDS | 50.0% | |
| AGGGATCAACGTCATGCAGT+TGG | + | chr4.1:5038889-5038908 | MS.gene06030:CDS | 50.0% | |
| AGTTGCCGGGTGTACAAAAG+GGG | + | chr4.1:5039493-5039512 | MS.gene06030:CDS | 50.0% | |
| ATCCCCTAGAGGAAGGCTTA+AGG | - | chr4.1:5038482-5038501 | None:intergenic | 50.0% | |
| ATGTTGCGACTTGATTCCCC+TGG | + | chr4.1:5038441-5038460 | MS.gene06030:CDS | 50.0% | |
| CAAGTTGCCGGGTGTACAAA+AGG | + | chr4.1:5039491-5039510 | MS.gene06030:CDS | 50.0% | |
| CCACCATGGCCCTTACAAAA+GGG | - | chr4.1:5039608-5039627 | None:intergenic | 50.0% | |
| CCTGGTGCTTGTAACACTAC+CGG | - | chr4.1:5040257-5040276 | None:intergenic | 50.0% | |
| CTAGAGGAAGGCTTAAGGGA+GGG | - | chr4.1:5038477-5038496 | None:intergenic | 50.0% | |
| CTCCCTTAAGCCTTCCTCTA+GGG | + | chr4.1:5038476-5038495 | MS.gene06030:CDS | 50.0% | |
| CTGACTTCTGCAAGGCACAT+GGG | + | chr4.1:5039837-5039856 | MS.gene06030:CDS | 50.0% | |
| CTGCACTCTTAGTGCAACCA+AGG | - | chr4.1:5039274-5039293 | None:intergenic | 50.0% | |
| CTTTGCATCTCACATGGAGG+AGG | + | chr4.1:5039458-5039477 | MS.gene06030:CDS | 50.0% | |
| GAATATGGCATCCAGCCAGA+TGG | + | chr4.1:5039896-5039915 | MS.gene06030:CDS | 50.0% | |
| GAATCAAGGTTCGGGCACTT+GGG | + | chr4.1:5038324-5038343 | MS.gene06030:CDS | 50.0% | |
| GAATTACCATGGCGATGTGG+TGG | - | chr4.1:5039086-5039105 | None:intergenic | 50.0% | |
| GGCAAGAGATGCAAGTCTGA+AGG | + | chr4.1:5039788-5039807 | MS.gene06030:CDS | 50.0% | |
| GGGTAAACGTTGTACCTACC+AGG | + | chr4.1:5039628-5039647 | MS.gene06030:CDS | 50.0% | |
| GGTAGGAGATGTCAGAAACC+TGG | + | chr4.1:5039179-5039198 | MS.gene06030:CDS | 50.0% | |
| GGTCTGTGTGCACTTCATAG+TGG | + | chr4.1:5039950-5039969 | MS.gene06030:CDS | 50.0% | |
| GGTCTTTGCATCTCACATGG+AGG | + | chr4.1:5039455-5039474 | MS.gene06030:CDS | 50.0% | |
| GGTTCATGGAGGTCTCTCTT+TGG | + | chr4.1:5039991-5040010 | MS.gene06030:CDS | 50.0% | |
| TACAACGTTTACCCCCACCA+TGG | - | chr4.1:5039622-5039641 | None:intergenic | 50.0% | |
| TAGAGGAAGGCTTAAGGGAG+GGG | - | chr4.1:5038476-5038495 | None:intergenic | 50.0% | |
| TAGTGCAAATTCCACCTCCC+TGG | - | chr4.1:5039649-5039668 | None:intergenic | 50.0% | |
| TCCCCTAGAGGAAGGCTTAA+GGG | - | chr4.1:5038481-5038500 | None:intergenic | 50.0% | |
| TCCCTTAAGCCTTCCTCTAG+GGG | + | chr4.1:5038477-5038496 | MS.gene06030:CDS | 50.0% | |
| TCTGGACTGTGTATCCGACA+TGG | + | chr4.1:5039377-5039396 | MS.gene06030:CDS | 50.0% | |
| TGACTTCTGCAAGGCACATG+GGG | + | chr4.1:5039838-5039857 | MS.gene06030:CDS | 50.0% | |
| TGAGGAGTGGTCCAGAACAA+TGG | - | chr4.1:5039009-5039028 | None:intergenic | 50.0% | |
| TGATAGGCCTTCTGCACTCT+TGG | - | chr4.1:5039435-5039454 | None:intergenic | 50.0% | |
| TGCCATATTCTGACCCAGGA+TGG | - | chr4.1:5039886-5039905 | None:intergenic | 50.0% | |
| TGGATGCCATATTCTGACCC+AGG | - | chr4.1:5039890-5039909 | None:intergenic | 50.0% | |
| TTCTGTATTGCCCATGGTGG+TGG | + | chr4.1:5039308-5039327 | MS.gene06030:CDS | 50.0% | |
| ! | AAGAGTGCAGAAGGCCTATC+AGG | + | chr4.1:5039434-5039453 | MS.gene06030:CDS | 50.0% |
| ! | AATATCTGACTCGCAGGGTC+TGG | - | chr4.1:5038787-5038806 | None:intergenic | 50.0% |
| ! | ACTCCCTTTTGTAAGGGCCA+TGG | + | chr4.1:5039602-5039621 | MS.gene06030:CDS | 50.0% |
| ! | ACTGACTTCTGCAAGGCACA+TGG | + | chr4.1:5039836-5039855 | MS.gene06030:CDS | 50.0% |
| ! | AGTTGCTGTTCCTGAAGGCA+GGG | + | chr4.1:5040192-5040211 | MS.gene06030:CDS | 50.0% |
| ! | CCTTTTGTAAGGGCCATGGT+GGG | + | chr4.1:5039606-5039625 | MS.gene06030:CDS | 50.0% |
| ! | CTTCCTTGTCACTTGGGCTT+GGG | + | chr4.1:5038553-5038572 | MS.gene06030:CDS | 50.0% |
| ! | CTTTTGTAAGGGCCATGGTG+GGG | + | chr4.1:5039607-5039626 | MS.gene06030:CDS | 50.0% |
| ! | CTTTTGTACACCCGGCAACT+TGG | - | chr4.1:5039493-5039512 | None:intergenic | 50.0% |
| ! | GCACTAAGAGTGCAGAAGGA+CGG | + | chr4.1:5039279-5039298 | MS.gene06030:CDS | 50.0% |
| ! | GGCAGCTCTATGCAAGTTGA+AGG | + | chr4.1:5038387-5038406 | MS.gene06030:CDS | 50.0% |
| ! | GGTTGCACTAAGAGTGCAGA+AGG | + | chr4.1:5039275-5039294 | MS.gene06030:CDS | 50.0% |
| ! | GTTGGCTCTTCCTTGTCACT+TGG | + | chr4.1:5038546-5038565 | MS.gene06030:CDS | 50.0% |
| ! | TCTGATGGCAATGCTGACTG+CGG | + | chr4.1:5040228-5040247 | MS.gene06030:CDS | 50.0% |
| ! | TCTTCCTTGTCACTTGGGCT+TGG | + | chr4.1:5038552-5038571 | MS.gene06030:CDS | 50.0% |
| ! | TTTGCAAAGCACATGGTGGG+GGG | + | chr4.1:5039534-5039553 | MS.gene06030:CDS | 50.0% |
| ! | TTTTGTAAGGGCCATGGTGG+GGG | + | chr4.1:5039608-5039627 | MS.gene06030:CDS | 50.0% |
| ! | TTTTGTGTGGCACATGGTGG+TGG | + | chr4.1:5039692-5039711 | MS.gene06030:CDS | 50.0% |
| !! | AGGTAGCACTGACTTCTGCA+AGG | + | chr4.1:5039829-5039848 | MS.gene06030:CDS | 50.0% |
| !! | GTTGTTCTAGAGCTGCCAGA+GGG | + | chr4.1:5039351-5039370 | MS.gene06030:CDS | 50.0% |
| !! | TGATCTGGCTTGCTAGAACG+AGG | - | chr4.1:5040031-5040050 | None:intergenic | 50.0% |
| !!! | GGGAGCACTCCCTTTTGTAA+GGG | + | chr4.1:5039596-5039615 | MS.gene06030:CDS | 50.0% |
| AAGTGCAAGCACCATCTGGC+TGG | - | chr4.1:5039910-5039929 | None:intergenic | 55.0% | |
| ACAGCACCAGGGTGCACTAA+GGG | + | chr4.1:5039566-5039585 | MS.gene06030:CDS | 55.0% | |
| ACCTCTTGCCACCACCATGT+CGG | - | chr4.1:5039394-5039413 | None:intergenic | 55.0% | |
| ACGTCATGCAGTTGGATGCC+GGG | + | chr4.1:5038897-5038916 | MS.gene06030:CDS | 55.0% | |
| ACTGATCACTGTGTCCGCCA+CGG | + | chr4.1:5039761-5039780 | MS.gene06030:CDS | 55.0% | |
| AGACATAGCCGTGCAAGCCA+CGG | - | chr4.1:5038616-5038635 | None:intergenic | 55.0% | |
| AGAGCTGCCAGAGGGAAATC+TGG | + | chr4.1:5039359-5039378 | MS.gene06030:CDS | 55.0% | |
| CAGAAACCTGGCTGCCACAA+AGG | + | chr4.1:5039191-5039210 | MS.gene06030:CDS | 55.0% | |
| CCCACCATGGCCCTTACAAA+AGG | - | chr4.1:5039609-5039628 | None:intergenic | 55.0% | |
| CCGGTAGTGTTACAAGCACC+AGG | + | chr4.1:5040254-5040273 | MS.gene06030:CDS | 55.0% | |
| CCTAGAGGAAGGCTTAAGGG+AGG | - | chr4.1:5038478-5038497 | None:intergenic | 55.0% | |
| CCTCCCTTAAGCCTTCCTCT+AGG | + | chr4.1:5038475-5038494 | MS.gene06030:CDS | 55.0% | |
| CTGCTGCTGATGTGTTAGCC+CGG | - | chr4.1:5039063-5039082 | None:intergenic | 55.0% | |
| CTGTGTATCCGACATGGTGG+TGG | + | chr4.1:5039383-5039402 | MS.gene06030:CDS | 55.0% | |
| GACTTCTGCAAGGCACATGG+GGG | + | chr4.1:5039839-5039858 | MS.gene06030:CDS | 55.0% | |
| GCAAATTCCACCTCCCTGGT+AGG | - | chr4.1:5039645-5039664 | None:intergenic | 55.0% | |
| GCTTGCACGGCTATGTCTTC+AGG | + | chr4.1:5038618-5038637 | MS.gene06030:CDS | 55.0% | |
| GGAAACGGTGTACAGCACCA+GGG | + | chr4.1:5039555-5039574 | MS.gene06030:CDS | 55.0% | |
| GGAATCAAGGTTCGGGCACT+TGG | + | chr4.1:5038323-5038342 | MS.gene06030:CDS | 55.0% | |
| GGACTGTGTATCCGACATGG+TGG | + | chr4.1:5039380-5039399 | MS.gene06030:CDS | 55.0% | |
| GGATGTGGAAAGGGAGCTAG+AGG | + | chr4.1:5039125-5039144 | MS.gene06030:CDS | 55.0% | |
| GGCAGGCGATGTGAATACCT+TGG | + | chr4.1:5039254-5039273 | MS.gene06030:CDS | 55.0% | |
| GGCCATCCTGGGTCAGAATA+TGG | + | chr4.1:5039881-5039900 | MS.gene06030:CDS | 55.0% | |
| TACAGCACCAGGGTGCACTA+AGG | + | chr4.1:5039565-5039584 | MS.gene06030:CDS | 55.0% | |
| TACGACCCTCAGCTCCTTTG+TGG | - | chr4.1:5039208-5039227 | None:intergenic | 55.0% | |
| TCCATGGGCCTTGCAGTACA+CGG | - | chr4.1:5039231-5039250 | None:intergenic | 55.0% | |
| ! | AAGCACATGGTGGGGGGAAA+CGG | + | chr4.1:5039540-5039559 | MS.gene06030:CDS | 55.0% |
| ! | AAGTTCAGCCGTGGCTTGCA+CGG | + | chr4.1:5038605-5038624 | MS.gene06030:CDS | 55.0% |
| ! | CAGTTGCTGTTCCTGAAGGC+AGG | + | chr4.1:5040191-5040210 | MS.gene06030:CDS | 55.0% |
| ! | CCCTTTTGTAAGGGCCATGG+TGG | + | chr4.1:5039605-5039624 | MS.gene06030:CDS | 55.0% |
| ! | CTGATGGCAATGCTGACTGC+GGG | + | chr4.1:5040229-5040248 | MS.gene06030:CDS | 55.0% |
| ! | CTGTGCCCCTTTTGTACACC+CGG | - | chr4.1:5039501-5039520 | None:intergenic | 55.0% |
| ! | GGAAAGAGGTGTGCTGTAGC+AGG | + | chr4.1:5039713-5039732 | MS.gene06030:CDS | 55.0% |
| ! | GGGTGTACAAAAGGGGCACA+GGG | + | chr4.1:5039500-5039519 | MS.gene06030:CDS | 55.0% |
| ! | GGGTGTGGAAAGAGTGCACA+AGG | + | chr4.1:5039809-5039828 | MS.gene06030:CDS | 55.0% |
| ! | GGTGCATGGTGGAAGTCTGA+TGG | + | chr4.1:5040213-5040232 | MS.gene06030:CDS | 55.0% |
| ! | GGTGTACAAAAGGGGCACAG+GGG | + | chr4.1:5039501-5039520 | MS.gene06030:CDS | 55.0% |
| ! | GTTCTGGACCACTCCTCAAC+TGG | + | chr4.1:5039011-5039030 | MS.gene06030:CDS | 55.0% |
| ! | TCCCTTGCTGTCTGATGAGC+TGG | - | chr4.1:5038586-5038605 | None:intergenic | 55.0% |
| !! | GCACAAAGAGTGCCAGAGGA+AGG | + | chr4.1:5039738-5039757 | MS.gene06030:CDS | 55.0% |
| !! | GGCTTGCTAGAACGAGGATC+CGG | - | chr4.1:5040025-5040044 | None:intergenic | 55.0% |
| !! | GGTTGTTCTAGAGCTGCCAG+AGG | + | chr4.1:5039350-5039369 | MS.gene06030:CDS | 55.0% |
| !! | TGGCACATGGTGGTGGAAAG+AGG | + | chr4.1:5039699-5039718 | MS.gene06030:CDS | 55.0% |
| !!! | GGGGAGCACTCCCTTTTGTA+AGG | + | chr4.1:5039595-5039614 | MS.gene06030:CDS | 55.0% |
| ACATCGCCTGCCTCCTCCAT+GGG | - | chr4.1:5039246-5039265 | None:intergenic | 60.0% | |
| ACCGTGTACTGCAAGGCCCA+TGG | + | chr4.1:5039227-5039246 | MS.gene06030:CDS | 60.0% | |
| ACGCCCAAGCCCAAGTGACA+AGG | - | chr4.1:5038559-5038578 | None:intergenic | 60.0% | |
| ACTCGCAGGGTCTGGTGGAA+AGG | - | chr4.1:5038779-5038798 | None:intergenic | 60.0% | |
| AGGGAGGGGATCGAAGAACC+AGG | - | chr4.1:5038462-5038481 | None:intergenic | 60.0% | |
| CAGCAAGGGAAGTTCAGCCG+TGG | + | chr4.1:5038596-5038615 | MS.gene06030:CDS | 60.0% | |
| CGTCATGCAGTTGGATGCCG+GGG | + | chr4.1:5038898-5038917 | MS.gene06030:CDS | 60.0% | |
| CGTTGTACCTACCAGGGAGG+TGG | + | chr4.1:5039635-5039654 | MS.gene06030:CDS | 60.0% | |
| CTGATCACTGTGTCCGCCAC+GGG | + | chr4.1:5039762-5039781 | MS.gene06030:CDS | 60.0% | |
| GACGTCGATGCCAAGTTGCC+GGG | + | chr4.1:5039480-5039499 | MS.gene06030:CDS | 60.0% | |
| GCATCTTCGGCCACCACCAT+GGG | - | chr4.1:5039321-5039340 | None:intergenic | 60.0% | |
| GGACGTCGATGCCAAGTTGC+CGG | + | chr4.1:5039479-5039498 | MS.gene06030:CDS | 60.0% | |
| GGAGGCAAGAGATGCTCGTG+GGG | + | chr4.1:5039860-5039879 | MS.gene06030:CDS | 60.0% | |
| GGAGGGGATCGAAGAACCAG+GGG | - | chr4.1:5038460-5038479 | None:intergenic | 60.0% | |
| GGCCGAAGATGCAGCCATGA+TGG | + | chr4.1:5039329-5039348 | MS.gene06030:CDS | 60.0% | |
| GGCTGCCACAAAGGAGCTGA+GGG | + | chr4.1:5039200-5039219 | MS.gene06030:CDS | 60.0% | |
| GGGAAACGGTGTACAGCACC+AGG | + | chr4.1:5039554-5039573 | MS.gene06030:CDS | 60.0% | |
| GGGAGGCAAGAGATGCTCGT+GGG | + | chr4.1:5039859-5039878 | MS.gene06030:CDS | 60.0% | |
| GGGAGGGGATCGAAGAACCA+GGG | - | chr4.1:5038461-5038480 | None:intergenic | 60.0% | |
| GGGTCGTACCGTGTACTGCA+AGG | + | chr4.1:5039220-5039239 | MS.gene06030:CDS | 60.0% | |
| GTCATGCAGTTGGATGCCGG+GGG | + | chr4.1:5038899-5038918 | MS.gene06030:CDS | 60.0% | |
| GTGACCACCTTCGTCAGCTG+AGG | - | chr4.1:5040161-5040180 | None:intergenic | 60.0% | |
| GTGTACTGCAAGGCCCATGG+AGG | + | chr4.1:5039230-5039249 | MS.gene06030:CDS | 60.0% | |
| GTTCCTGAAGGCAGGGTGCA+TGG | + | chr4.1:5040199-5040218 | MS.gene06030:CDS | 60.0% | |
| TACTGCAAGGCCCATGGAGG+AGG | + | chr4.1:5039233-5039252 | MS.gene06030:CDS | 60.0% | |
| TCAGCACCCTTAGTGCACCC+TGG | - | chr4.1:5039575-5039594 | None:intergenic | 60.0% | |
| TCAGCTCCTTTGTGGCAGCC+AGG | - | chr4.1:5039200-5039219 | None:intergenic | 60.0% | |
| TGATCACTGTGTCCGCCACG+GGG | + | chr4.1:5039763-5039782 | MS.gene06030:CDS | 60.0% | |
| TGCATCTTCGGCCACCACCA+TGG | - | chr4.1:5039322-5039341 | None:intergenic | 60.0% | |
| TGGCTGCCACAAAGGAGCTG+AGG | + | chr4.1:5039199-5039218 | MS.gene06030:CDS | 60.0% | |
| TTCTGCAAGGCACATGGGGG+AGG | + | chr4.1:5039842-5039861 | MS.gene06030:CDS | 60.0% | |
| ! | ATCTGACTCGCAGGGTCTGG+TGG | - | chr4.1:5038784-5038803 | None:intergenic | 60.0% |
| ! | CGGGTGTACAAAAGGGGCAC+AGG | + | chr4.1:5039499-5039518 | MS.gene06030:CDS | 60.0% |
| ! | GCAATGCTGACTGCGGGTTC+CGG | + | chr4.1:5040235-5040254 | MS.gene06030:CDS | 60.0% |
| !! | AAGGGAGCTAGAGGTGCCTC+TGG | + | chr4.1:5039134-5039153 | MS.gene06030:CDS | 60.0% |
| !! | AGGGTGCACTAAGGGTGCTG+AGG | + | chr4.1:5039574-5039593 | MS.gene06030:CDS | 60.0% |
| !! | GGCTGCACAAAGAGTGCCAG+AGG | + | chr4.1:5039734-5039753 | MS.gene06030:CDS | 60.0% |
| !! | GGGTGCACTAAGGGTGCTGA+GGG | + | chr4.1:5039575-5039594 | MS.gene06030:CDS | 60.0% |
| !! | GGTGCACTAAGGGTGCTGAG+GGG | + | chr4.1:5039576-5039595 | MS.gene06030:CDS | 60.0% |
| !! | TCCGACATGGTGGTGGCAAG+AGG | + | chr4.1:5039390-5039409 | MS.gene06030:CDS | 60.0% |
| AGATGCTCGTGGGGCCATCC+TGG | + | chr4.1:5039869-5039888 | MS.gene06030:CDS | 65.0% | |
| ATCTCTTGCCACCCCCGTGG+CGG | - | chr4.1:5039778-5039797 | None:intergenic | 65.0% | |
| CACATCGCCTGCCTCCTCCA+TGG | - | chr4.1:5039247-5039266 | None:intergenic | 65.0% | |
| CAGCAGCCACCACATCGCCA+TGG | + | chr4.1:5039077-5039096 | MS.gene06030:CDS | 65.0% | |
| CCACCATGCACCCTGCCTTC+AGG | - | chr4.1:5040205-5040224 | None:intergenic | 65.0% | |
| CCTGAAGGCAGGGTGCATGG+TGG | + | chr4.1:5040202-5040221 | MS.gene06030:CDS | 65.0% | |
| CGTGCCTCAGCTGACGAAGG+TGG | + | chr4.1:5040154-5040173 | MS.gene06030:CDS | 65.0% | |
| GATCACTGTGTCCGCCACGG+GGG | + | chr4.1:5039764-5039783 | MS.gene06030:CDS | 65.0% | |
| GATGCTCGTGGGGCCATCCT+GGG | + | chr4.1:5039870-5039889 | MS.gene06030:CDS | 65.0% | |
| GCTCGTGCCTCAGCTGACGA+AGG | + | chr4.1:5040151-5040170 | MS.gene06030:CDS | 65.0% | |
| GGGGAGGCAAGAGATGCTCG+TGG | + | chr4.1:5039858-5039877 | MS.gene06030:CDS | 65.0% | |
| TGCATCTCTTGCCACCCCCG+TGG | - | chr4.1:5039781-5039800 | None:intergenic | 65.0% | |
| GCAAGGCCCATGGAGGAGGC+AGG | + | chr4.1:5039237-5039256 | MS.gene06030:CDS | 70.0% | |
| CACTGTGTCCGCCACGGGGG+TGG | + | chr4.1:5039767-5039786 | MS.gene06030:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 5038321 | 5040348 | 5038321 | ID=MS.gene06030 |
| chr4.1 | mRNA | 5038321 | 5040348 | 5038321 | ID=MS.gene06030.t1;Parent=MS.gene06030 |
| chr4.1 | exon | 5038321 | 5040348 | 5038321 | ID=MS.gene06030.t1.exon1;Parent=MS.gene06030.t1 |
| chr4.1 | CDS | 5038321 | 5040348 | 5038321 | ID=cds.MS.gene06030.t1;Parent=MS.gene06030.t1 |
| Gene Sequence |
| Protein sequence |