Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029146.t1 | RHN82684.1 | 98.1 | 667 | 11 | 2 | 121 | 786 | 69 | 734 | 0.00E+00 | 1250 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029146.t1 | A0A396JZT7 | 98.1 | 667 | 11 | 2 | 121 | 786 | 69 | 734 | 0.0e+00 | 1250.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene05448 | MS.gene029146 | PPI |
| MS.gene98829 | MS.gene029146 | PPI |
| MS.gene80831 | MS.gene029146 | PPI |
| MS.gene82577 | MS.gene029146 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029146.t1 | MTR_1g115260 | 97.758 | 669 | 11 | 2 | 121 | 786 | 69 | 736 | 0.0 | 1326 |
| MS.gene029146.t1 | MTR_6g084190 | 42.793 | 673 | 345 | 7 | 108 | 776 | 47 | 683 | 3.05e-177 | 525 |
| MS.gene029146.t1 | MTR_7g086350 | 30.673 | 639 | 410 | 9 | 153 | 777 | 45 | 664 | 2.26e-98 | 320 |
| MS.gene029146.t1 | MTR_2g007330 | 29.614 | 699 | 411 | 16 | 125 | 783 | 127 | 784 | 3.48e-78 | 269 |
| MS.gene029146.t1 | MTR_7g006750 | 40.411 | 146 | 77 | 1 | 303 | 448 | 562 | 697 | 1.09e-27 | 120 |
| MS.gene029146.t1 | MTR_1g115270 | 79.167 | 48 | 7 | 1 | 66 | 113 | 18 | 62 | 1.11e-18 | 83.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029146.t1 | AT5G23390 | 59.070 | 667 | 262 | 4 | 125 | 786 | 69 | 729 | 0.0 | 787 |
| MS.gene029146.t1 | AT1G48840 | 44.018 | 677 | 339 | 7 | 114 | 785 | 48 | 689 | 0.0 | 535 |
| MS.gene029146.t1 | AT3G18350 | 41.106 | 669 | 355 | 5 | 114 | 777 | 48 | 682 | 3.07e-167 | 499 |
| MS.gene029146.t1 | AT3G18350 | 41.106 | 669 | 355 | 5 | 114 | 777 | 48 | 682 | 3.07e-167 | 499 |
| MS.gene029146.t1 | AT3G18350 | 41.106 | 669 | 355 | 5 | 114 | 777 | 48 | 682 | 3.07e-167 | 499 |
| MS.gene029146.t1 | AT2G21720 | 31.610 | 677 | 415 | 14 | 121 | 774 | 75 | 726 | 5.63e-96 | 315 |
| MS.gene029146.t1 | AT2G21720 | 31.563 | 678 | 417 | 14 | 121 | 774 | 75 | 729 | 6.35e-96 | 315 |
| MS.gene029146.t1 | AT1G71240 | 28.736 | 696 | 415 | 15 | 122 | 774 | 139 | 796 | 2.73e-74 | 258 |
| MS.gene029146.t1 | AT1G71240 | 28.223 | 737 | 437 | 17 | 89 | 774 | 100 | 795 | 1.82e-73 | 256 |
| MS.gene029146.t1 | AT1G71240 | 26.610 | 590 | 343 | 16 | 89 | 630 | 100 | 647 | 2.43e-41 | 161 |
Find 165 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTAATTTCTGTGTATCTTTA+AGG | 0.055572 | 1.2:+85072440 | None:intergenic |
| AGTACTTGCCAGGGCTAATT+TGG | 0.149646 | 1.2:-85072416 | MS.gene029146:CDS |
| TCCTCCAAAGTACATATTAT+TGG | 0.204918 | 1.2:-85069508 | MS.gene029146:CDS |
| CAGCTATGAAAACTAGAAAT+AGG | 0.206345 | 1.2:+85069547 | None:intergenic |
| GCCGGTAAGGATGGAATTTC+TGG | 0.215703 | 1.2:+85081819 | None:intergenic |
| TTCTGGAAATTTCATCTCTT+TGG | 0.217298 | 1.2:+85081836 | None:intergenic |
| CGCAAGTTCGCTTTAAATTC+AGG | 0.223832 | 1.2:+85072529 | None:intergenic |
| GTTCTACTGCATTTCGATTT+GGG | 0.239473 | 1.2:+85070316 | None:intergenic |
| TCGGAGGATTCAGATGGTTT+TGG | 0.241484 | 1.2:+85085014 | None:intergenic |
| GTGCGGTGGGTTGTGGGTGC+AGG | 0.263872 | 1.2:+85084919 | None:intergenic |
| CCAAGGGGTCCAGTTAATTC+AGG | 0.294876 | 1.2:+85072715 | None:intergenic |
| TGTTCTACTGCATTTCGATT+TGG | 0.299359 | 1.2:+85070315 | None:intergenic |
| CAACCAGTTCTTCAACATAT+TGG | 0.310600 | 1.2:-85073737 | MS.gene029146:CDS |
| TTATTCTAGTTCCACAAATA+TGG | 0.311179 | 1.2:-85074485 | MS.gene029146:CDS |
| TTCCACAAATATGGCAGTTC+AGG | 0.311684 | 1.2:-85074476 | MS.gene029146:intron |
| CGGTACTGGACTTCGGTCTT+TGG | 0.322398 | 1.2:+85078172 | None:intergenic |
| TACAGCTGCTGTGTTATTGC+AGG | 0.328138 | 1.2:+85085052 | None:intergenic |
| ATTTATCATAAACAAGAAAA+TGG | 0.332047 | 1.2:+85073963 | None:intergenic |
| GTTACGTGTGCAGGGTTATC+AGG | 0.338639 | 1.2:-85073850 | MS.gene029146:intron |
| TGCTAACCGACTACAACTTT+TGG | 0.341873 | 1.2:-85071442 | MS.gene029146:CDS |
| GATACCAGACACCGAGGTTT+AGG | 0.352570 | 1.2:-85084971 | MS.gene029146:CDS |
| CTCAAAGTACAGAGCATAAT+TGG | 0.352628 | 1.2:+85072810 | None:intergenic |
| TGGGTTGTGGGTGCAGGGTT+CGG | 0.352664 | 1.2:+85084925 | None:intergenic |
| TTGAAGATTTCCAACAGAAT+TGG | 0.356177 | 1.2:+85073808 | None:intergenic |
| CACAGATTTGTCAGGAAGTT+CGG | 0.358773 | 1.2:-85072463 | MS.gene029146:CDS |
| GTCATAAAACCTGAATTAAC+TGG | 0.374772 | 1.2:-85072724 | MS.gene029146:CDS |
| TGTTTCTGTGCGGTGGGTTG+TGG | 0.381791 | 1.2:+85084912 | None:intergenic |
| AATTCGTTAGGCTGTTTGAC+AGG | 0.383841 | 1.2:+85072275 | None:intergenic |
| ATTCCAATATGTTGAAGAAC+TGG | 0.390982 | 1.2:+85073734 | None:intergenic |
| GTAGTGGCACTCTTCGGTCT+TGG | 0.399094 | 1.2:-85072175 | MS.gene029146:CDS |
| GATGCGCTCACCAATTCTTC+CGG | 0.405340 | 1.2:-85073995 | MS.gene029146:CDS |
| TGAGATTTGTTCTATTTGTT+TGG | 0.408547 | 1.2:-85081754 | MS.gene029146:CDS |
| AAACTCTACCTCGGGGAGAT+AGG | 0.411450 | 1.2:-85072309 | MS.gene029146:CDS |
| ACGAATTCAACTGCTGCTTC+TGG | 0.414117 | 1.2:-85072259 | MS.gene029146:CDS |
| GTACTTGCCAGGGCTAATTT+GGG | 0.414455 | 1.2:-85072415 | MS.gene029146:CDS |
| TCCAGAAATTCCATCCTTAC+CGG | 0.416594 | 1.2:-85081820 | MS.gene029146:CDS |
| GGCAGTAAAACAATCCCTTC+TGG | 0.417122 | 1.2:-85072065 | MS.gene029146:CDS |
| CGTTTGATGTTATGCTTGCT+TGG | 0.418987 | 1.2:-85074688 | MS.gene029146:CDS |
| AGTACAGAGCATAATTGGTC+AGG | 0.424316 | 1.2:+85072815 | None:intergenic |
| GTGCGATTTGAGGATTTAGT+AGG | 0.425776 | 1.2:-85081795 | MS.gene029146:CDS |
| ATGCTCACTTTGAGCGGTAC+TGG | 0.427848 | 1.2:+85078158 | None:intergenic |
| GAAAGCTATTCGGTATGATC+TGG | 0.431018 | 1.2:-85072764 | MS.gene029146:CDS |
| GAGATAGTACTTGATGTTGA+TGG | 0.432041 | 1.2:-85073773 | MS.gene029146:CDS |
| GTTTCTGTGCGGTGGGTTGT+GGG | 0.434686 | 1.2:+85084913 | None:intergenic |
| AGCTATGAAAACTAGAAATA+GGG | 0.437514 | 1.2:+85069548 | None:intergenic |
| TCAGGCTTAACGAGTTCAAC+AGG | 0.439071 | 1.2:+85069381 | None:intergenic |
| TCAGGGAATTCAAAGTAAAC+AGG | 0.441197 | 1.2:+85072547 | None:intergenic |
| TACAAATGTTGCAGTTATGA+AGG | 0.441951 | 1.2:-85071981 | MS.gene029146:intron |
| GTATCTCCTTCGGCAGCTCC+TGG | 0.444778 | 1.2:+85084989 | None:intergenic |
| GAAAAGAACCTTACTTATCA+AGG | 0.448588 | 1.2:+85073930 | None:intergenic |
| TTTGAATCACTTATTCAAGC+TGG | 0.449766 | 1.2:-85070261 | MS.gene029146:CDS |
| TTGCTACTTTCTCTCCTACA+TGG | 0.450734 | 1.2:+85069453 | None:intergenic |
| GAGTCTACGTCCGGAAGAAT+TGG | 0.451248 | 1.2:+85073985 | None:intergenic |
| ATCACCAATAATATGTACTT+TGG | 0.452320 | 1.2:+85069504 | None:intergenic |
| TACTGTTGTTTCTGTGCGGT+GGG | 0.453884 | 1.2:+85084906 | None:intergenic |
| CTCAAATCGCACTGCCGGTA+AGG | 0.462068 | 1.2:+85081806 | None:intergenic |
| GCAAGTTCGCTTTAAATTCA+GGG | 0.462657 | 1.2:+85072530 | None:intergenic |
| GGAGAGAAAGTAGCAAAAGA+TGG | 0.463327 | 1.2:-85069446 | MS.gene029146:CDS |
| CGAACTTGCGACGTGACTAC+TGG | 0.464107 | 1.2:-85072516 | MS.gene029146:CDS |
| GTATCCTAAACCTCGGTGTC+TGG | 0.466906 | 1.2:+85084967 | None:intergenic |
| CGGTTAGCAGATTCGATGAC+TGG | 0.467013 | 1.2:+85071456 | None:intergenic |
| AAATGGTCGGCAATAAGTAC+TGG | 0.473092 | 1.2:+85070421 | None:intergenic |
| AACCTGAACTGCCATATTTG+TGG | 0.475661 | 1.2:+85074474 | None:intergenic |
| AATGTTCTGGCCAATTCTGT+TGG | 0.478165 | 1.2:-85073818 | MS.gene029146:CDS |
| CGATGCCCTCCACCTTCACT+TGG | 0.480212 | 1.2:+85072005 | None:intergenic |
| TACTTTGAGTCACTTGGCGT+TGG | 0.481887 | 1.2:-85072796 | MS.gene029146:CDS |
| CTTACCGGCAGTGCGATTTG+AGG | 0.486779 | 1.2:-85081805 | MS.gene029146:CDS |
| TGCGGTGGGTTGTGGGTGCA+GGG | 0.489713 | 1.2:+85084920 | None:intergenic |
| CCTAGCTGAAACTCTACCTC+GGG | 0.490226 | 1.2:-85072317 | MS.gene029146:CDS |
| CCTTCGGCAGCTCCTGGTGT+CGG | 0.495158 | 1.2:+85084995 | None:intergenic |
| AGAAATTAGAAGTACTTGCC+AGG | 0.496232 | 1.2:-85072426 | MS.gene029146:CDS |
| GCAGCAGTAGTGGCACTCTT+CGG | 0.498014 | 1.2:-85072181 | MS.gene029146:CDS |
| ACCAATAATATGTACTTTGG+AGG | 0.498802 | 1.2:+85069507 | None:intergenic |
| ATCAAATAGACGAGCACCAA+GGG | 0.500919 | 1.2:+85072699 | None:intergenic |
| GGATAAGGCGGTTTAGAGAA+TGG | 0.505752 | 1.2:-85069425 | MS.gene029146:CDS |
| GTTTGATGTTATGCTTGCTT+GGG | 0.506925 | 1.2:-85074687 | MS.gene029146:CDS |
| AAACGTGAAACGACGAAACT+CGG | 0.507710 | 1.2:+85074706 | None:intergenic |
| TTCTACTGCATTTCGATTTG+GGG | 0.507842 | 1.2:+85070317 | None:intergenic |
| ATTGGAATTGCCGCATGGCC+TGG | 0.507979 | 1.2:-85073719 | MS.gene029146:intron |
| AAAGTAGCAAAAGATGGATA+AGG | 0.510277 | 1.2:-85069440 | MS.gene029146:CDS |
| AAGTGATTCAAACTGTGTAA+TGG | 0.512494 | 1.2:+85070272 | None:intergenic |
| TCTGGGCGCAGACATGAAAC+AGG | 0.514494 | 1.2:-85072746 | MS.gene029146:CDS |
| TCAGCAATAAGAATACAAAC+AGG | 0.516154 | 1.2:+85074043 | None:intergenic |
| AAGAAAATGGAGTCTACGTC+CGG | 0.518433 | 1.2:+85073976 | None:intergenic |
| TCGGTGTCTGGTATCTCCTT+CGG | 0.522522 | 1.2:+85084979 | None:intergenic |
| GTGTGCATGAGAAAGCTATT+CGG | 0.523798 | 1.2:-85072774 | MS.gene029146:CDS |
| AATCGCACTGCCGGTAAGGA+TGG | 0.524294 | 1.2:+85081810 | None:intergenic |
| TGGAAAAGCAGAAGCTGCAC+AGG | 0.524943 | 1.2:-85072038 | MS.gene029146:CDS |
| AAGCAGCAGTTGAATTCGTT+AGG | 0.530582 | 1.2:+85072263 | None:intergenic |
| TCTACTTGCTATATTGCCAC+AGG | 0.531443 | 1.2:-85070208 | MS.gene029146:intron |
| GCTCTGTACTTTGAGTCACT+TGG | 0.533288 | 1.2:-85072802 | MS.gene029146:CDS |
| ACAGCTGCTGTGTTATTGCA+GGG | 0.534351 | 1.2:+85085053 | None:intergenic |
| CTTTGAGCGGTACTGGACTT+CGG | 0.535263 | 1.2:+85078165 | None:intergenic |
| CCTGAATTAACTGGACCCCT+TGG | 0.536045 | 1.2:-85072715 | MS.gene029146:CDS |
| AAACAATCCCTTCTGGACAC+TGG | 0.536771 | 1.2:-85072058 | MS.gene029146:CDS |
| TCATTGCAATCATTATGCTC+TGG | 0.538139 | 1.2:-85070392 | MS.gene029146:CDS |
| TTTGTTTGGTTGAGTTTGAG+AGG | 0.539801 | 1.2:-85081740 | MS.gene029146:CDS |
| GTTGATGATAAGAAGACAGT+TGG | 0.540394 | 1.2:-85074091 | MS.gene029146:CDS |
| AAATCCTCAAATCGCACTGC+CGG | 0.541079 | 1.2:+85081801 | None:intergenic |
| ACGAGTTCAACAGGAGCAGC+AGG | 0.541808 | 1.2:+85069390 | None:intergenic |
| AGTTGGTGAGATAAATCCCT+TGG | 0.545390 | 1.2:-85072092 | MS.gene029146:CDS |
| CTTCTTTGAGTGCGCGATAG+CGG | 0.545640 | 1.2:+85072386 | None:intergenic |
| TTTGATTCGGAACTTCCTCT+CGG | 0.547629 | 1.2:-85074827 | MS.gene029146:CDS |
| AAAGCTATTCGGTATGATCT+GGG | 0.549979 | 1.2:-85072763 | MS.gene029146:CDS |
| AGGGTTCGGTTAATCCGTGT+TGG | 0.551048 | 1.2:+85084939 | None:intergenic |
| AAGAGTGCCACTACTGCTGC+AGG | 0.552554 | 1.2:+85072184 | None:intergenic |
| CGATGAAACCGTTGGTGATG+AGG | 0.557119 | 1.2:-85074524 | MS.gene029146:CDS |
| CATCTGAATCCTCCGACACC+AGG | 0.560468 | 1.2:-85085007 | MS.gene029146:CDS |
| GTTCGGTTAATCCGTGTTGG+CGG | 0.560825 | 1.2:+85084942 | None:intergenic |
| AGTGTCTCCTGCAGCAGTAG+TGG | 0.562406 | 1.2:-85072191 | MS.gene029146:CDS |
| TGGCGTAGACATTTCAGAAA+GGG | 0.564583 | 1.2:-85070372 | MS.gene029146:CDS |
| TCGGCAGCTCCTGGTGTCGG+AGG | 0.565146 | 1.2:+85084998 | None:intergenic |
| TAAGAAGACAGTTGGTCTTG+AGG | 0.570923 | 1.2:-85074083 | MS.gene029146:CDS |
| TGTTGAAGAACTGGTTGAGT+CGG | 0.574153 | 1.2:+85073743 | None:intergenic |
| TACGTGCACACAGATTTGTC+AGG | 0.575818 | 1.2:-85072471 | MS.gene029146:CDS |
| CTTGCGACGTGACTACTGGT+TGG | 0.576162 | 1.2:-85072512 | MS.gene029146:CDS |
| ATTCGTTAGGCTGTTTGACA+GGG | 0.576982 | 1.2:+85072276 | None:intergenic |
| AACATATTGGAATTGCCGCA+TGG | 0.579713 | 1.2:-85073724 | MS.gene029146:CDS |
| ACTTGATCAGCATGAACACT+AGG | 0.579984 | 1.2:+85074659 | None:intergenic |
| TCTACTGCATTTCGATTTGG+GGG | 0.582177 | 1.2:+85070318 | None:intergenic |
| TGGCTGATGCTCACTTTGAG+CGG | 0.584560 | 1.2:+85078152 | None:intergenic |
| GAAGATGCCCAAATTAGCCC+TGG | 0.584679 | 1.2:+85072408 | None:intergenic |
| TTACTGTTGTTTCTGTGCGG+TGG | 0.584732 | 1.2:+85084905 | None:intergenic |
| TTGTTTGGTTGAGTTTGAGA+GGG | 0.587511 | 1.2:-85081739 | MS.gene029146:CDS |
| CTGGCGTAGACATTTCAGAA+AGG | 0.588478 | 1.2:-85070373 | MS.gene029146:CDS |
| AAAAGAACCTTACTTATCAA+GGG | 0.589932 | 1.2:+85073931 | None:intergenic |
| CTGGTGTCGGAGGATTCAGA+TGG | 0.595326 | 1.2:+85085008 | None:intergenic |
| GTTGTTTGTGATATCCGAGT+TGG | 0.602375 | 1.2:-85072109 | MS.gene029146:CDS |
| TGCTTACTGTTGTTTCTGTG+CGG | 0.605232 | 1.2:+85084902 | None:intergenic |
| GTTTCATCGTTACTACAAGT+AGG | 0.606383 | 1.2:+85074538 | None:intergenic |
| CCGACACCAGGAGCTGCCGA+AGG | 0.606482 | 1.2:-85084995 | MS.gene029146:CDS |
| CAGCTGCTGTGTTATTGCAG+GGG | 0.612458 | 1.2:+85085054 | None:intergenic |
| GGCGGTCGTATCCTAAACCT+CGG | 0.613138 | 1.2:+85084960 | None:intergenic |
| ACGAGGCCAAAAGTTGTAGT+CGG | 0.613401 | 1.2:+85071436 | None:intergenic |
| ACCTAGCTGAAACTCTACCT+CGG | 0.613726 | 1.2:-85072318 | MS.gene029146:CDS |
| TGAGCGCATCGAAAAGATTG+TGG | 0.615013 | 1.2:+85074008 | None:intergenic |
| TGTGGACCAAGTGAAGGTGG+AGG | 0.616658 | 1.2:-85072011 | MS.gene029146:CDS |
| TGAGATAAATCCCTTGGACG+TGG | 0.618215 | 1.2:-85072086 | MS.gene029146:CDS |
| ACACAAGGGAGATGCCATGT+AGG | 0.618248 | 1.2:-85069467 | MS.gene029146:CDS |
| GTACAGAGCATAATTGGTCA+GGG | 0.621579 | 1.2:+85072816 | None:intergenic |
| GAAATTAGAAGTACTTGCCA+GGG | 0.622596 | 1.2:-85072425 | MS.gene029146:CDS |
| GGCAACTGTGGACCAAGTGA+AGG | 0.624655 | 1.2:-85072017 | MS.gene029146:CDS |
| AACTGTGGACCAAGTGAAGG+TGG | 0.625377 | 1.2:-85072014 | MS.gene029146:CDS |
| GGTTAGCAGATTCGATGACT+GGG | 0.635781 | 1.2:+85071457 | None:intergenic |
| CGTAGACATTTCAGAAAGGG+AGG | 0.636982 | 1.2:-85070369 | MS.gene029146:CDS |
| AGAAGCTGCACAGGCAACTG+TGG | 0.637250 | 1.2:-85072029 | MS.gene029146:CDS |
| CCCGAGGTAGAGTTTCAGCT+AGG | 0.640810 | 1.2:+85072317 | None:intergenic |
| GTGGACCAAGTGAAGGTGGA+GGG | 0.641291 | 1.2:-85072010 | MS.gene029146:CDS |
| TTAGGATACGACCGCCAACA+CGG | 0.648502 | 1.2:-85084953 | MS.gene029146:CDS |
| AAAAGCTCTTTCACTCCGAG+AGG | 0.651460 | 1.2:+85074812 | None:intergenic |
| AGCATCATCCTCATCACCAA+CGG | 0.651464 | 1.2:+85074516 | None:intergenic |
| TGTAGTAACGATGAAACCGT+TGG | 0.663360 | 1.2:-85074532 | MS.gene029146:CDS |
| TATCAAATAGACGAGCACCA+AGG | 0.663449 | 1.2:+85072698 | None:intergenic |
| GTAGCAAAAGATGGATAAGG+CGG | 0.664723 | 1.2:-85069437 | MS.gene029146:CDS |
| AGGGATTTATCTCACCAACT+CGG | 0.677132 | 1.2:+85072095 | None:intergenic |
| GAAATACTCACCAGGCCATG+CGG | 0.677568 | 1.2:+85073709 | None:intergenic |
| TAAACGAACAAAATTCAACA+AGG | 0.696080 | 1.2:+85074774 | None:intergenic |
| TATTCATCGAGTGTTACACA+AGG | 0.697962 | 1.2:-85069482 | MS.gene029146:CDS |
| TAAGGCGGTTTAGAGAATGG+TGG | 0.706781 | 1.2:-85069422 | MS.gene029146:CDS |
| TCAAATAGACGAGCACCAAG+GGG | 0.719250 | 1.2:+85072700 | None:intergenic |
| ATTCATCGAGTGTTACACAA+GGG | 0.728416 | 1.2:-85069481 | MS.gene029146:CDS |
| TGCAAGATCCTATCTCCCCG+AGG | 0.734645 | 1.2:+85072301 | None:intergenic |
| CTAGCTGAAACTCTACCTCG+GGG | 0.754230 | 1.2:-85072316 | MS.gene029146:CDS |
| TCTATAGAAGTCTTTCCACG+AGG | 0.763515 | 1.2:+85071419 | None:intergenic |
| GAAGGAGATACCAGACACCG+AGG | 0.790237 | 1.2:-85084977 | MS.gene029146:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.2 | gene | 85069359 | 85088194 | 85069359 | ID=MS.gene029146 |
| chr1.2 | mRNA | 85069359 | 85088194 | 85069359 | ID=MS.gene029146.t1;Parent=MS.gene029146 |
| chr1.2 | exon | 85088183 | 85088194 | 85088183 | ID=MS.gene029146.t1.exon1;Parent=MS.gene029146.t1 |
| chr1.2 | CDS | 85088183 | 85088194 | 85088183 | ID=cds.MS.gene029146.t1;Parent=MS.gene029146.t1 |
| chr1.2 | exon | 85084909 | 85085096 | 85084909 | ID=MS.gene029146.t1.exon2;Parent=MS.gene029146.t1 |
| chr1.2 | CDS | 85084909 | 85085096 | 85084909 | ID=cds.MS.gene029146.t1;Parent=MS.gene029146.t1 |
| chr1.2 | exon | 85081731 | 85081869 | 85081731 | ID=MS.gene029146.t1.exon3;Parent=MS.gene029146.t1 |
| chr1.2 | CDS | 85081731 | 85081869 | 85081731 | ID=cds.MS.gene029146.t1;Parent=MS.gene029146.t1 |
| chr1.2 | exon | 85078166 | 85078203 | 85078166 | ID=MS.gene029146.t1.exon4;Parent=MS.gene029146.t1 |
| chr1.2 | CDS | 85078166 | 85078203 | 85078166 | ID=cds.MS.gene029146.t1;Parent=MS.gene029146.t1 |
| chr1.2 | exon | 85074661 | 85074886 | 85074661 | ID=MS.gene029146.t1.exon5;Parent=MS.gene029146.t1 |
| chr1.2 | CDS | 85074661 | 85074886 | 85074661 | ID=cds.MS.gene029146.t1;Parent=MS.gene029146.t1 |
| chr1.2 | exon | 85074477 | 85074566 | 85074477 | ID=MS.gene029146.t1.exon6;Parent=MS.gene029146.t1 |
| chr1.2 | CDS | 85074477 | 85074566 | 85074477 | ID=cds.MS.gene029146.t1;Parent=MS.gene029146.t1 |
| chr1.2 | exon | 85073944 | 85074113 | 85073944 | ID=MS.gene029146.t1.exon7;Parent=MS.gene029146.t1 |
| chr1.2 | CDS | 85073944 | 85074113 | 85073944 | ID=cds.MS.gene029146.t1;Parent=MS.gene029146.t1 |
| chr1.2 | exon | 85073720 | 85073859 | 85073720 | ID=MS.gene029146.t1.exon8;Parent=MS.gene029146.t1 |
| chr1.2 | CDS | 85073720 | 85073859 | 85073720 | ID=cds.MS.gene029146.t1;Parent=MS.gene029146.t1 |
| chr1.2 | exon | 85072670 | 85072847 | 85072670 | ID=MS.gene029146.t1.exon9;Parent=MS.gene029146.t1 |
| chr1.2 | CDS | 85072670 | 85072847 | 85072670 | ID=cds.MS.gene029146.t1;Parent=MS.gene029146.t1 |
| chr1.2 | exon | 85071982 | 85072576 | 85071982 | ID=MS.gene029146.t1.exon10;Parent=MS.gene029146.t1 |
| chr1.2 | CDS | 85071982 | 85072576 | 85071982 | ID=cds.MS.gene029146.t1;Parent=MS.gene029146.t1 |
| chr1.2 | exon | 85071378 | 85071490 | 85071378 | ID=MS.gene029146.t1.exon11;Parent=MS.gene029146.t1 |
| chr1.2 | CDS | 85071378 | 85071490 | 85071378 | ID=cds.MS.gene029146.t1;Parent=MS.gene029146.t1 |
| chr1.2 | exon | 85070209 | 85070452 | 85070209 | ID=MS.gene029146.t1.exon12;Parent=MS.gene029146.t1 |
| chr1.2 | CDS | 85070209 | 85070452 | 85070209 | ID=cds.MS.gene029146.t1;Parent=MS.gene029146.t1 |
| chr1.2 | exon | 85069359 | 85069586 | 85069359 | ID=MS.gene029146.t1.exon13;Parent=MS.gene029146.t1 |
| chr1.2 | CDS | 85069359 | 85069586 | 85069359 | ID=cds.MS.gene029146.t1;Parent=MS.gene029146.t1 |
| Gene Sequence |
| Protein sequence |
