Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82577.t1 | XP_003620460.1 | 98 | 693 | 14 | 0 | 1 | 693 | 1 | 693 | 0.00E+00 | 1333.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82577.t1 | G7KN19 | 98.0 | 693 | 14 | 0 | 1 | 693 | 1 | 693 | 0.0e+00 | 1333.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene82577 | MS.gene90868 | PPI |
| MS.gene82577 | MS.gene75140 | PPI |
| MS.gene82577 | MS.gene029146 | PPI |
| MS.gene82577 | MS.gene037404 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82577.t1 | MTR_6g084190 | 97.980 | 693 | 14 | 0 | 1 | 693 | 1 | 693 | 0.0 | 1395 |
| MS.gene82577.t1 | MTR_1g115260 | 43.251 | 689 | 352 | 7 | 39 | 693 | 53 | 736 | 0.0 | 545 |
| MS.gene82577.t1 | MTR_7g086350 | 32.452 | 681 | 393 | 17 | 48 | 683 | 5 | 663 | 6.68e-101 | 324 |
| MS.gene82577.t1 | MTR_2g007330 | 32.859 | 633 | 370 | 16 | 92 | 681 | 153 | 773 | 1.56e-83 | 281 |
| MS.gene82577.t1 | MTR_7g006750 | 44.538 | 119 | 66 | 0 | 214 | 332 | 561 | 679 | 4.41e-26 | 114 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene82577.t1 | AT1G48840 | 64.689 | 691 | 239 | 5 | 4 | 692 | 2 | 689 | 0.0 | 912 |
| MS.gene82577.t1 | AT3G18350 | 63.504 | 685 | 246 | 3 | 4 | 686 | 2 | 684 | 0.0 | 886 |
| MS.gene82577.t1 | AT3G18350 | 63.504 | 685 | 246 | 3 | 4 | 686 | 2 | 684 | 0.0 | 886 |
| MS.gene82577.t1 | AT3G18350 | 63.504 | 685 | 246 | 3 | 4 | 686 | 2 | 684 | 0.0 | 886 |
| MS.gene82577.t1 | AT5G23390 | 42.302 | 721 | 376 | 6 | 9 | 693 | 13 | 729 | 1.16e-180 | 532 |
| MS.gene82577.t1 | AT2G21720 | 29.706 | 680 | 422 | 14 | 48 | 683 | 64 | 731 | 6.46e-91 | 299 |
| MS.gene82577.t1 | AT2G21720 | 29.690 | 677 | 423 | 14 | 48 | 683 | 64 | 728 | 4.96e-90 | 296 |
| MS.gene82577.t1 | AT1G71240 | 30.423 | 710 | 415 | 23 | 32 | 681 | 105 | 795 | 2.25e-77 | 265 |
| MS.gene82577.t1 | AT1G71240 | 31.523 | 663 | 382 | 21 | 73 | 681 | 152 | 796 | 4.08e-77 | 264 |
| MS.gene82577.t1 | AT1G71240 | 30.427 | 562 | 316 | 22 | 32 | 537 | 105 | 647 | 9.77e-51 | 187 |
Find 160 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AGAGGTGGGAGAGGAGATTT+AGG | 0.083385 | 6.3:+78582083 | MS.gene82577:CDS |
| TCTAACTTAGGATTTGTATT+TGG | 0.120687 | 6.3:+78578437 | MS.gene82577:CDS |
| GTCTTCAATCTTTGCTAAAT+TGG | 0.125465 | 6.3:+78580077 | MS.gene82577:CDS |
| GATGATCCATTGAAGTCTTC+TGG | 0.177764 | 6.3:+78580100 | MS.gene82577:CDS |
| CTAGAATTTCCAGAGCTTAA+AGG | 0.203423 | 6.3:+78578080 | MS.gene82577:CDS |
| ATAAGCAAGTTTGGAATTAA+AGG | 0.223303 | 6.3:+78578164 | MS.gene82577:CDS |
| CACAAATTCATAAGCAAGTT+TGG | 0.224728 | 6.3:+78578155 | MS.gene82577:CDS |
| GACACGCCCGTCGTGATTAT+TGG | 0.230943 | 6.3:+78578102 | MS.gene82577:CDS |
| TGATGGTATCGACACTAATT+TGG | 0.238972 | 6.3:+78578610 | MS.gene82577:CDS |
| CATATCGTGATGGATTCTTT+AGG | 0.244347 | 6.3:-78575976 | None:intergenic |
| CTAACTTAGGATTTGTATTT+GGG | 0.293102 | 6.3:+78578438 | MS.gene82577:CDS |
| ACGATATGCAAGGAACTTAT+TGG | 0.293732 | 6.3:+78575991 | MS.gene82577:CDS |
| TTATCTCTTTCAAGTTTAAC+AGG | 0.295578 | 6.3:-78582133 | None:intergenic |
| TAAAAGATGGATCACTTAAA+TGG | 0.300961 | 6.3:+78575584 | MS.gene82577:CDS |
| TCTATCAGCAGGATTGGTTT+TGG | 0.305817 | 6.3:+78581976 | MS.gene82577:CDS |
| AATTTATGTGATCAGCTTCC+AGG | 0.314602 | 6.3:+78578299 | MS.gene82577:CDS |
| TGTTCTTCGGTTACATCATT+TGG | 0.316715 | 6.3:+78580131 | MS.gene82577:CDS |
| CTCTCTGTGCTAGCTTTCCT+TGG | 0.318234 | 6.3:-78582064 | None:intergenic |
| ATATCGTGATGGATTCTTTA+GGG | 0.321662 | 6.3:-78575975 | None:intergenic |
| GACCTCTTCAAGTGATCTTC+AGG | 0.333251 | 6.3:+78575925 | MS.gene82577:CDS |
| TCTTCAATCTTTGCTAAATT+GGG | 0.343179 | 6.3:+78580078 | MS.gene82577:CDS |
| ATAGAATACATTCCACTTGC+AGG | 0.345829 | 6.3:-78578395 | None:intergenic |
| CATACAAGATATTAGTTCTC+TGG | 0.346457 | 6.3:+78578244 | MS.gene82577:CDS |
| ACTGAGGTACTTGTCATAGA+TGG | 0.351296 | 6.3:-78577065 | None:intergenic |
| AGCTGTTCCATTGTATTCAT+TGG | 0.351687 | 6.3:-78580761 | None:intergenic |
| CCCCATGGTCCAGTCAATTC+GGG | 0.359975 | 6.3:-78577913 | None:intergenic |
| TAAGCAAGTTTGGAATTAAA+GGG | 0.368186 | 6.3:+78578165 | MS.gene82577:CDS |
| TGTTGGAGAAACGACTTTGT+TGG | 0.374602 | 6.3:+78578511 | MS.gene82577:CDS |
| ATGATCCATTGAAGTCTTCT+GGG | 0.375673 | 6.3:+78580101 | MS.gene82577:CDS |
| ACCCCATGGTCCAGTCAATT+CGG | 0.380916 | 6.3:-78577914 | None:intergenic |
| AATAATGACGTTGGCAATGA+TGG | 0.389470 | 6.3:-78576987 | None:intergenic |
| ATACATTCCACTTGCAGGCT+TGG | 0.398499 | 6.3:-78578390 | None:intergenic |
| GAGGTGGGAGAGGAGATTTA+GGG | 0.410678 | 6.3:+78582084 | MS.gene82577:CDS |
| GTTGACGGGGTTAAAGTTGA+TGG | 0.413859 | 6.3:+78578593 | MS.gene82577:CDS |
| GAGAAGATTCTTGAGATTGA+TGG | 0.415310 | 6.3:+78577476 | MS.gene82577:CDS |
| TCCATTGTATTCATTGGTGG+AGG | 0.417119 | 6.3:-78580755 | None:intergenic |
| TGCTGAAGAATTTGAGGAGA+TGG | 0.417912 | 6.3:+78575630 | MS.gene82577:CDS |
| TTGGACACGGTTTCTAACTT+AGG | 0.424685 | 6.3:+78578425 | MS.gene82577:CDS |
| GTTGTTAAACCCGAATTGAC+TGG | 0.436542 | 6.3:+78577904 | MS.gene82577:CDS |
| TTTATCCTCTAGATGAACTT+AGG | 0.443113 | 6.3:+78580050 | MS.gene82577:CDS |
| ATGGAAAATTCACCTTCTGC+TGG | 0.443978 | 6.3:+78575649 | MS.gene82577:CDS |
| TGGAATTAAAGGGGTGGCAC+GGG | 0.446870 | 6.3:+78578175 | MS.gene82577:CDS |
| TGGTCTTCTATCAGCAGGAT+TGG | 0.450796 | 6.3:+78581970 | MS.gene82577:CDS |
| TCTGTGCTAGCTTTCCTTGG+AGG | 0.452362 | 6.3:-78582061 | None:intergenic |
| AATGTATTCTATCTCGGTCT+TGG | 0.460063 | 6.3:+78578406 | MS.gene82577:CDS |
| CGGCACAGGCAACAGTTGAC+GGG | 0.464197 | 6.3:+78578579 | MS.gene82577:CDS |
| AGAAGAACCATGTATTTAGT+AGG | 0.465719 | 6.3:-78582007 | None:intergenic |
| CACTAATTTGGCTGTCATGA+AGG | 0.468410 | 6.3:+78578622 | MS.gene82577:CDS |
| CATTGTATTCATTGGTGGAG+GGG | 0.468825 | 6.3:-78580753 | None:intergenic |
| CCTACCTTGATTAAAACATC+TGG | 0.469406 | 6.3:-78580705 | None:intergenic |
| TAGACCTTCAAGCATAGCTC+TGG | 0.471427 | 6.3:-78575560 | None:intergenic |
| GAGGTGCTGAGTTCGTCAAC+TGG | 0.472151 | 6.3:+78577025 | MS.gene82577:CDS |
| GCATTTGGTCTTCTATCAGC+AGG | 0.472932 | 6.3:+78581965 | MS.gene82577:CDS |
| GAAAGACATACATTAGTAAG+AGG | 0.475303 | 6.3:-78576139 | None:intergenic |
| GCTACAGAGAAGATGGCATT+TGG | 0.475466 | 6.3:+78581950 | MS.gene82577:CDS |
| TCAATTCGGGTTTAACAACT+TGG | 0.475636 | 6.3:-78577900 | None:intergenic |
| CAGAGAACTAATATCTTGTA+TGG | 0.475644 | 6.3:-78578243 | None:intergenic |
| TTAGGGAATCAGACGCCTCT+AGG | 0.480111 | 6.3:-78575958 | None:intergenic |
| CCATTGTATTCATTGGTGGA+GGG | 0.481765 | 6.3:-78580754 | None:intergenic |
| TTCTATCTCGGTCTTGGACA+CGG | 0.483446 | 6.3:+78578412 | MS.gene82577:CDS |
| CAAATAGCTCAGTTGAGAGC+AGG | 0.486802 | 6.3:+78578468 | MS.gene82577:CDS |
| AGAAGAGAATCATTCGGTAC+AGG | 0.487307 | 6.3:-78578269 | None:intergenic |
| GATGTTAGCTTGGGAGGTCC+CGG | 0.488645 | 6.3:+78576102 | MS.gene82577:CDS |
| CTGAGGTACTTGTCATAGAT+GGG | 0.488970 | 6.3:-78577064 | None:intergenic |
| AAAACCAGAGCTATGCTTGA+AGG | 0.490777 | 6.3:+78575556 | MS.gene82577:CDS |
| ACCCGAATTGACTGGACCAT+GGG | 0.491536 | 6.3:+78577912 | MS.gene82577:CDS |
| TCATTGAAAGCACAAATATC+CGG | 0.493280 | 6.3:+78576037 | MS.gene82577:CDS |
| CATACGACATGATGTTAGCT+TGG | 0.493987 | 6.3:+78576092 | MS.gene82577:CDS |
| GGATCACTTAAATGGTTGCT+TGG | 0.495675 | 6.3:+78575592 | MS.gene82577:CDS |
| TCAAGTTTAACAGGAGCAGC+TGG | 0.495682 | 6.3:-78582124 | None:intergenic |
| GTTGATGAAGAAGTATCTGT+TGG | 0.496350 | 6.3:+78576929 | MS.gene82577:CDS |
| TTTCTTGCCTACTAAATACA+TGG | 0.497536 | 6.3:+78582000 | MS.gene82577:CDS |
| CTTGAAGGTCTAGTAAAAGA+TGG | 0.497778 | 6.3:+78575571 | MS.gene82577:CDS |
| TAAACTTGAAAGAGATAAAG+AGG | 0.498380 | 6.3:+78582138 | MS.gene82577:CDS |
| CGAACAACTAGGTTTGCAAC+TGG | 0.499415 | 6.3:-78575697 | None:intergenic |
| CAAAACCCAGAAGACTTCAA+TGG | 0.500067 | 6.3:-78580106 | None:intergenic |
| AACGACTTTGTTGGAAAGAG+TGG | 0.500119 | 6.3:+78578520 | MS.gene82577:CDS |
| CTAGCACAGAGAGGTGGGAG+AGG | 0.500801 | 6.3:+78582074 | MS.gene82577:CDS |
| GACATACATTAGTAAGAGGT+TGG | 0.501304 | 6.3:-78576135 | None:intergenic |
| TCTGGAAATTCTAGTACAGC+TGG | 0.501371 | 6.3:-78578071 | None:intergenic |
| CGGGCGTGTCCTTTAAGCTC+TGG | 0.503208 | 6.3:-78578089 | None:intergenic |
| TTGGAATTAAAGGGGTGGCA+CGG | 0.508888 | 6.3:+78578174 | MS.gene82577:CDS |
| ATACAAGATATTAGTTCTCT+GGG | 0.509977 | 6.3:+78578245 | MS.gene82577:CDS |
| AGAGGTTGGCTAGTTGCAGC+CGG | 0.520618 | 6.3:-78576121 | None:intergenic |
| GAAAGCTAGCACAGAGAGGT+GGG | 0.522811 | 6.3:+78582069 | MS.gene82577:CDS |
| CAATCAGGCTACAGAGAAGA+TGG | 0.522845 | 6.3:+78581943 | MS.gene82577:intron |
| TGGCACGGGACGAAGCACTT+TGG | 0.524061 | 6.3:+78578189 | MS.gene82577:CDS |
| TCGGCACAGGCAACAGTTGA+CGG | 0.527785 | 6.3:+78578578 | MS.gene82577:CDS |
| GGGAGAGGAGATTTAGGGAA+TGG | 0.527843 | 6.3:+78582089 | MS.gene82577:CDS |
| GTGAACACAAAGAACCTCTC+TGG | 0.529689 | 6.3:-78578135 | None:intergenic |
| TTGCGCATCTACGAACAACT+AGG | 0.530591 | 6.3:-78575708 | None:intergenic |
| TCTTCGGTTACATCATTTGG+AGG | 0.535739 | 6.3:+78580134 | MS.gene82577:CDS |
| GGAAAGCTAGCACAGAGAGG+TGG | 0.536760 | 6.3:+78582068 | MS.gene82577:CDS |
| ATACGACATGATGTTAGCTT+GGG | 0.540122 | 6.3:+78576093 | MS.gene82577:CDS |
| TGTTCCATTGTATTCATTGG+TGG | 0.543664 | 6.3:-78580758 | None:intergenic |
| GAAGAGAATCATTCGGTACA+GGG | 0.544777 | 6.3:-78578268 | None:intergenic |
| ATAAATTGCAGGGGTTGTGT+TGG | 0.544973 | 6.3:+78580632 | MS.gene82577:intron |
| AAGTGGAATGTATTCTATCT+CGG | 0.547591 | 6.3:+78578400 | MS.gene82577:CDS |
| TTAGTAGAGATGGCTACAGC+TGG | 0.548329 | 6.3:+78575532 | None:intergenic |
| ATAATGACGTTGGCAATGAT+GGG | 0.549033 | 6.3:-78576986 | None:intergenic |
| GATTCTTGAGATTGATGGAA+CGG | 0.549448 | 6.3:+78577481 | MS.gene82577:CDS |
| GGCTAGCCAATAATCACGAC+GGG | 0.554338 | 6.3:-78578108 | None:intergenic |
| ACGGGACGAAGCACTTTGGA+AGG | 0.555644 | 6.3:+78578193 | MS.gene82577:CDS |
| CTCCTGAAGATCACTTGAAG+AGG | 0.557415 | 6.3:-78575927 | None:intergenic |
| TGGAAAATTCACCTTCTGCT+GGG | 0.563234 | 6.3:+78575650 | MS.gene82577:CDS |
| TCGAGTTTGACATATTTACA+AGG | 0.566280 | 6.3:-78578343 | None:intergenic |
| ACAAAGAACCTCTCTGGTGA+TGG | 0.566501 | 6.3:-78578129 | None:intergenic |
| ATCTACTTGATAAAACGTTC+CGG | 0.566860 | 6.3:+78576062 | MS.gene82577:CDS |
| ATGCCTACATGCTCAAGGAC+TGG | 0.567428 | 6.3:-78577515 | None:intergenic |
| TTGGCAATGATGGGAACTGC+AGG | 0.568955 | 6.3:-78576977 | None:intergenic |
| TAGTCGATCTCATGGCAGAA+AGG | 0.569834 | 6.3:-78577448 | None:intergenic |
| GCTGAACAGTTCATACAAGA+TGG | 0.570538 | 6.3:+78580812 | MS.gene82577:CDS |
| CTCACCTCTAGTCGATCTCA+TGG | 0.573715 | 6.3:-78577456 | None:intergenic |
| AAGTTCCTTGCATATCGTGA+TGG | 0.574505 | 6.3:-78575986 | None:intergenic |
| GATCACTTGAAGAGGTCTTG+AGG | 0.575639 | 6.3:-78575919 | None:intergenic |
| ACAAAGTTCTTCCCAGCAGA+AGG | 0.576602 | 6.3:-78575661 | None:intergenic |
| CTCTTCAAGTGATCTTCAGG+AGG | 0.577246 | 6.3:+78575928 | MS.gene82577:CDS |
| CGACATGATGTTAGCTTGGG+AGG | 0.582067 | 6.3:+78576096 | MS.gene82577:CDS |
| AACTCGAGAGAGTCAAATCA+CGG | 0.583924 | 6.3:+78578359 | MS.gene82577:CDS |
| AGAGGAGATTTAGGGAATGG+TGG | 0.584841 | 6.3:+78582092 | MS.gene82577:CDS |
| GTAGGCATATCCACATGGCC+TGG | 0.590522 | 6.3:+78577530 | MS.gene82577:CDS |
| TCTAATATCAAGTCTCCACC+TGG | 0.593455 | 6.3:-78578317 | None:intergenic |
| CGAGTTTGACATATTTACAA+GGG | 0.594101 | 6.3:-78578342 | None:intergenic |
| AACCCGAATTGACTGGACCA+TGG | 0.594228 | 6.3:+78577911 | MS.gene82577:CDS |
| GAGGTTGGCTAGTTGCAGCC+GGG | 0.595974 | 6.3:-78576120 | None:intergenic |
| CATGATTCCAAGCCTGCAAG+TGG | 0.597092 | 6.3:+78578383 | MS.gene82577:CDS |
| TGTCATAGATGGGGAACTGA+AGG | 0.598784 | 6.3:-78577054 | None:intergenic |
| AGAATCCATCACGATATGCA+AGG | 0.603071 | 6.3:+78575981 | MS.gene82577:CDS |
| TGGATATGCCTACATGCTCA+AGG | 0.604533 | 6.3:-78577520 | None:intergenic |
| CAGCCAGTCCTTGAGCATGT+AGG | 0.606167 | 6.3:+78577512 | MS.gene82577:CDS |
| AAGCAAGTTTGGAATTAAAG+GGG | 0.609097 | 6.3:+78578166 | MS.gene82577:CDS |
| TTACGATGTATTCACCTCCA+AGG | 0.613524 | 6.3:+78582047 | MS.gene82577:CDS |
| GCTGTTGGTGAAATAACTGT+TGG | 0.620558 | 6.3:+78578494 | MS.gene82577:CDS |
| TCATGTCGTATGTCAAGCGC+CGG | 0.623444 | 6.3:-78576081 | None:intergenic |
| CATAGATGGGGAACTGAAGG+CGG | 0.625700 | 6.3:-78577051 | None:intergenic |
| AACATGAGAAGAGAATCATT+CGG | 0.629351 | 6.3:-78578275 | None:intergenic |
| TCTTCAAGTGATCTTCAGGA+GGG | 0.637944 | 6.3:+78575929 | MS.gene82577:CDS |
| GTGCTGAGTTCGTCAACTGG+AGG | 0.639032 | 6.3:+78577028 | MS.gene82577:CDS |
| ATATTTCTTCTCAAGTTCCG+CGG | 0.640390 | 6.3:+78580839 | MS.gene82577:CDS |
| CACTTCCTAAGTTCATCTAG+AGG | 0.640974 | 6.3:-78580055 | None:intergenic |
| GTTGAGAGCAGGATTGCTGT+TGG | 0.641348 | 6.3:+78578479 | MS.gene82577:CDS |
| ATGCTCAAGGACTGGCTGTG+TGG | 0.641557 | 6.3:-78577507 | None:intergenic |
| ACTCGAGAGAGTCAAATCAC+GGG | 0.642880 | 6.3:+78578360 | MS.gene82577:CDS |
| CAAGTTTGGAATTAAAGGGG+TGG | 0.647570 | 6.3:+78578169 | MS.gene82577:CDS |
| TCTATGACAAGTACCTCAGT+GGG | 0.647687 | 6.3:+78577068 | MS.gene82577:CDS |
| GGGTTGTGTTGGTTATGCAG+CGG | 0.652675 | 6.3:+78580643 | MS.gene82577:CDS |
| CCCTCCACCAATGAATACAA+TGG | 0.653240 | 6.3:+78580754 | MS.gene82577:CDS |
| ATCTATGACAAGTACCTCAG+TGG | 0.655080 | 6.3:+78577067 | MS.gene82577:CDS |
| AAATGGACAGTAACAAGCCG+CGG | 0.662670 | 6.3:-78580856 | None:intergenic |
| AGCATGTAGGCATATCCACA+TGG | 0.667100 | 6.3:+78577525 | MS.gene82577:CDS |
| TTATGTGATCAGCTTCCAGG+TGG | 0.671882 | 6.3:+78578302 | MS.gene82577:CDS |
| TCAGGAGGGCTTCAACCTAG+AGG | 0.674963 | 6.3:+78575943 | MS.gene82577:CDS |
| TTGGCTAGCCATCACCAGAG+AGG | 0.683724 | 6.3:+78578121 | MS.gene82577:CDS |
| TGAGGTACTTGTCATAGATG+GGG | 0.685088 | 6.3:-78577063 | None:intergenic |
| AAAGCGCTTACCAGGCCATG+TGG | 0.685430 | 6.3:-78577540 | None:intergenic |
| CAAGGAAAGCTAGCACAGAG+AGG | 0.690802 | 6.3:+78582065 | MS.gene82577:CDS |
| CCCGAATTGACTGGACCATG+GGG | 0.691036 | 6.3:+78577913 | MS.gene82577:CDS |
| GGCACAGGCAACAGTTGACG+GGG | 0.699795 | 6.3:+78578580 | MS.gene82577:CDS |
| TCTGCCATGAGATCGACTAG+AGG | 0.701340 | 6.3:+78577452 | MS.gene82577:CDS |
| TGGCTAGCCAATAATCACGA+CGG | 0.703739 | 6.3:-78578109 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.3 | gene | 78575541 | 78582177 | 78575541 | ID=MS.gene82577 |
| chr6.3 | mRNA | 78575541 | 78582177 | 78575541 | ID=MS.gene82577.t1;Parent=MS.gene82577 |
| chr6.3 | exon | 78575541 | 78575731 | 78575541 | ID=MS.gene82577.t1.exon1;Parent=MS.gene82577.t1 |
| chr6.3 | CDS | 78575541 | 78575731 | 78575541 | ID=cds.MS.gene82577.t1;Parent=MS.gene82577.t1 |
| chr6.3 | exon | 78575916 | 78576150 | 78575916 | ID=MS.gene82577.t1.exon2;Parent=MS.gene82577.t1 |
| chr6.3 | CDS | 78575916 | 78576150 | 78575916 | ID=cds.MS.gene82577.t1;Parent=MS.gene82577.t1 |
| chr6.3 | exon | 78576929 | 78577098 | 78576929 | ID=MS.gene82577.t1.exon3;Parent=MS.gene82577.t1 |
| chr6.3 | CDS | 78576929 | 78577098 | 78576929 | ID=cds.MS.gene82577.t1;Parent=MS.gene82577.t1 |
| chr6.3 | exon | 78577409 | 78577551 | 78577409 | ID=MS.gene82577.t1.exon4;Parent=MS.gene82577.t1 |
| chr6.3 | CDS | 78577409 | 78577551 | 78577409 | ID=cds.MS.gene82577.t1;Parent=MS.gene82577.t1 |
| chr6.3 | exon | 78577803 | 78577980 | 78577803 | ID=MS.gene82577.t1.exon5;Parent=MS.gene82577.t1 |
| chr6.3 | CDS | 78577803 | 78577980 | 78577803 | ID=cds.MS.gene82577.t1;Parent=MS.gene82577.t1 |
| chr6.3 | exon | 78578064 | 78578643 | 78578064 | ID=MS.gene82577.t1.exon6;Parent=MS.gene82577.t1 |
| chr6.3 | CDS | 78578064 | 78578643 | 78578064 | ID=cds.MS.gene82577.t1;Parent=MS.gene82577.t1 |
| chr6.3 | exon | 78580043 | 78580155 | 78580043 | ID=MS.gene82577.t1.exon7;Parent=MS.gene82577.t1 |
| chr6.3 | CDS | 78580043 | 78580155 | 78580043 | ID=cds.MS.gene82577.t1;Parent=MS.gene82577.t1 |
| chr6.3 | exon | 78580643 | 78580886 | 78580643 | ID=MS.gene82577.t1.exon8;Parent=MS.gene82577.t1 |
| chr6.3 | CDS | 78580643 | 78580886 | 78580643 | ID=cds.MS.gene82577.t1;Parent=MS.gene82577.t1 |
| chr6.3 | exon | 78581950 | 78582177 | 78581950 | ID=MS.gene82577.t1.exon9;Parent=MS.gene82577.t1 |
| chr6.3 | CDS | 78581950 | 78582177 | 78581950 | ID=cds.MS.gene82577.t1;Parent=MS.gene82577.t1 |
| Gene Sequence |
| Protein sequence |