Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029398.t1 | XP_013470187.1 | 97.1 | 926 | 24 | 3 | 1 | 924 | 1 | 925 | 0.00E+00 | 1870.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029398.t1 | Q9S7Y7 | 74.1 | 915 | 226 | 4 | 13 | 923 | 6 | 913 | 0.0e+00 | 1450.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029398.t1 | A0A072W1R5 | 97.1 | 926 | 24 | 3 | 1 | 924 | 1 | 925 | 0.0e+00 | 1870.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene029398 | MS.gene070893 | PPI |
| MS.gene029398 | MS.gene069133 | PPI |
| MS.gene029398 | MS.gene02726 | PPI |
| MS.gene029398 | MS.gene00023 | PPI |
| MS.gene029398 | MS.gene027805 | PPI |
| MS.gene029398 | MS.gene047991 | PPI |
| MS.gene029398 | MS.gene068597 | PPI |
| MS.gene029398 | MS.gene00027 | PPI |
| MS.gene029398 | MS.gene047493 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029398.t1 | MTR_1g110980 | 97.084 | 926 | 24 | 3 | 1 | 924 | 1 | 925 | 0.0 | 1857 |
| MS.gene029398.t1 | MTR_1g111000 | 82.465 | 941 | 145 | 6 | 1 | 924 | 1 | 938 | 0.0 | 1582 |
| MS.gene029398.t1 | MTR_5g057990 | 81.117 | 895 | 164 | 2 | 34 | 923 | 32 | 926 | 0.0 | 1560 |
| MS.gene029398.t1 | MTR_3g096870 | 27.758 | 843 | 482 | 24 | 24 | 808 | 35 | 808 | 2.36e-81 | 282 |
| MS.gene029398.t1 | MTR_5g026610 | 30.490 | 715 | 406 | 21 | 180 | 882 | 81 | 716 | 6.32e-79 | 275 |
| MS.gene029398.t1 | MTR_5g026610 | 30.490 | 715 | 406 | 21 | 180 | 882 | 144 | 779 | 9.53e-79 | 276 |
| MS.gene029398.t1 | MTR_5g026610 | 30.490 | 715 | 406 | 21 | 180 | 882 | 81 | 716 | 2.25e-78 | 275 |
| MS.gene029398.t1 | MTR_5g026610 | 30.490 | 715 | 406 | 21 | 180 | 882 | 144 | 779 | 2.67e-78 | 276 |
| MS.gene029398.t1 | MTR_5g026610 | 30.490 | 715 | 406 | 21 | 180 | 882 | 184 | 819 | 5.40e-78 | 276 |
| MS.gene029398.t1 | MTR_5g026610 | 30.952 | 546 | 306 | 14 | 341 | 882 | 2 | 480 | 9.98e-62 | 224 |
| MS.gene029398.t1 | MTR_6g014900 | 60.377 | 53 | 21 | 0 | 639 | 691 | 80 | 132 | 6.22e-15 | 72.8 |
| MS.gene029398.t1 | MTR_7g089780 | 28.251 | 223 | 127 | 9 | 557 | 755 | 630 | 843 | 7.85e-14 | 76.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029398.t1 | AT1G68560 | 75.281 | 890 | 210 | 3 | 37 | 923 | 31 | 913 | 0.0 | 1439 |
| MS.gene029398.t1 | AT3G45940 | 65.472 | 921 | 241 | 8 | 11 | 924 | 4 | 854 | 0.0 | 1238 |
| MS.gene029398.t1 | AT5G11720 | 45.652 | 920 | 457 | 13 | 15 | 922 | 13 | 901 | 0.0 | 830 |
| MS.gene029398.t1 | AT5G63840 | 29.972 | 704 | 393 | 20 | 150 | 818 | 189 | 827 | 4.64e-84 | 290 |
| MS.gene029398.t1 | AT5G63840 | 29.972 | 704 | 393 | 20 | 150 | 818 | 216 | 854 | 1.01e-83 | 290 |
| MS.gene029398.t1 | AT3G23640 | 32.680 | 612 | 316 | 19 | 223 | 820 | 119 | 648 | 4.02e-82 | 286 |
| MS.gene029398.t1 | AT3G23640 | 32.680 | 612 | 316 | 19 | 223 | 820 | 119 | 648 | 4.02e-82 | 286 |
| MS.gene029398.t1 | AT3G23640 | 32.680 | 612 | 316 | 19 | 223 | 820 | 188 | 717 | 4.82e-82 | 287 |
Find 251 sgRNAs with CRISPR-Local
Find 332 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATGATGCTCATAGTATTTA+TGG | 0.119026 | 1.4:-84612744 | MS.gene029398:CDS |
| TATAACATCAAGTGGAATTT+TGG | 0.152772 | 1.4:+84613337 | None:intergenic |
| CCATTTCCAAGCTTCATTTC+TGG | 0.177210 | 1.4:+84611895 | None:intergenic |
| TCCAGAAAGTTTAAAAGTTT+TGG | 0.188609 | 1.4:+84613248 | None:intergenic |
| ATATCCACTATGCTGAATTT+TGG | 0.203228 | 1.4:-84612567 | MS.gene029398:CDS |
| CCAATGCCTTATTGGGCTTT+TGG | 0.214511 | 1.4:-84614212 | MS.gene029398:intron |
| GACCAGCTCCAATGCCTTAT+TGG | 0.219272 | 1.4:-84614220 | MS.gene029398:CDS |
| TTGTCCCAGTTGATGGCTTA+TGG | 0.228309 | 1.4:-84612998 | MS.gene029398:CDS |
| CATGAACTTGTCCCAGTTGA+TGG | 0.228489 | 1.4:-84613005 | MS.gene029398:CDS |
| TCTTTGACATACAAGATTAT+TGG | 0.237986 | 1.4:-84614320 | MS.gene029398:CDS |
| AAATTCCACTTGATGTTATA+TGG | 0.240384 | 1.4:-84613334 | MS.gene029398:CDS |
| CATTTAGCTTTGCAGTTAAA+AGG | 0.247218 | 1.4:-84614682 | MS.gene029398:CDS |
| ATAAATGTGTTAGGATTAAA+TGG | 0.248372 | 1.4:-84611760 | MS.gene029398:CDS |
| AATCTCAACACTGATCTATA+TGG | 0.257614 | 1.4:-84614449 | MS.gene029398:CDS |
| TAATATGAGCCTCATAGTTT+AGG | 0.266079 | 1.4:+84612319 | None:intergenic |
| AAGAAAAGAGGCCTAGAAAT+TGG | 0.277562 | 1.4:+84612288 | None:intergenic |
| TAGTAGAAATTTCCAAATAT+TGG | 0.282009 | 1.4:+84614585 | None:intergenic |
| TTTGGATGTGGGTAGTTAAC+TGG | 0.282850 | 1.4:+84613266 | None:intergenic |
| GGCAAGTTTGCTTTGGATAA+AGG | 0.286766 | 1.4:-84611799 | MS.gene029398:CDS |
| TTCAAGGGCTTCAAGGAAAA+AGG | 0.287612 | 1.4:-84612689 | MS.gene029398:CDS |
| TCAATCCTAAAACAGTTTCT+TGG | 0.296518 | 1.4:-84613052 | MS.gene029398:CDS |
| CCCTACAAAATTAATGCTTC+AGG | 0.297372 | 1.4:-84612834 | MS.gene029398:CDS |
| CGCTCTACTTATGTTGGTTC+TGG | 0.298045 | 1.4:-84612651 | MS.gene029398:CDS |
| ACCATACAGAGAAGCATCTT+TGG | 0.303967 | 1.4:+84614556 | None:intergenic |
| CAATGCATTTCTTGCTGATT+CGG | 0.305619 | 1.4:+84612377 | None:intergenic |
| AGTCCACTATAATGGCATTT+TGG | 0.307844 | 1.4:-84612769 | MS.gene029398:CDS |
| CCACATGCAAGGGTGCATTA+AGG | 0.309564 | 1.4:+84612079 | None:intergenic |
| TAGATCAGTGTTGAGATTAA+TGG | 0.310952 | 1.4:+84614454 | None:intergenic |
| ACCAGCTCCAATGCCTTATT+GGG | 0.314645 | 1.4:-84614219 | MS.gene029398:CDS |
| TTAGTGGAGCCCCAATTTCT+AGG | 0.322227 | 1.4:-84612299 | MS.gene029398:CDS |
| CCCAAAGATGCTTCTCTGTA+TGG | 0.323700 | 1.4:-84614557 | MS.gene029398:CDS |
| GTAGAGCGGGTCAAAATAAA+AGG | 0.331081 | 1.4:+84612666 | None:intergenic |
| GACCCTAATGGTGCTATTAC+AGG | 0.332574 | 1.4:-84615049 | MS.gene029398:CDS |
| GGCTGCTCCCAAGTAAGAAT+TGG | 0.339178 | 1.4:+84612226 | None:intergenic |
| CTATCAACTTTCACATTTGT+TGG | 0.339792 | 1.4:+84611700 | None:intergenic |
| CCAAAGCAAACTTGCCCTCT+TGG | 0.345644 | 1.4:+84611806 | None:intergenic |
| CTAAGCACCCAATTCTTACT+TGG | 0.347287 | 1.4:-84612234 | MS.gene029398:CDS |
| AGTCCTGTAATAGCACCATT+AGG | 0.351657 | 1.4:+84615046 | None:intergenic |
| AACCATTCTTGGCTCAAGTT+TGG | 0.355816 | 1.4:-84613103 | MS.gene029398:CDS |
| ATTGACACAATAAATGTGTT+AGG | 0.356484 | 1.4:-84611769 | MS.gene029398:CDS |
| TTTCTAAGATCCATGTATAC+AGG | 0.357210 | 1.4:+84614419 | None:intergenic |
| AGATGCTTCTCTGTATGGTT+TGG | 0.363311 | 1.4:-84614552 | MS.gene029398:CDS |
| ACATGAGGGTGAACCATTCT+TGG | 0.363472 | 1.4:-84613114 | MS.gene029398:CDS |
| ACTTGACATAGAAGCGTAGA+AGG | 0.364622 | 1.4:+84614978 | None:intergenic |
| AATATGAGCCTCATAGTTTA+GGG | 0.368306 | 1.4:+84612320 | None:intergenic |
| TACTCATGATCCCATCTTCC+AGG | 0.371397 | 1.4:+84611573 | None:intergenic |
| CCAAGAGGGCAAGTTTGCTT+TGG | 0.372848 | 1.4:-84611806 | MS.gene029398:CDS |
| CCTTTGGTATACACCATAAC+TGG | 0.373757 | 1.4:+84613163 | None:intergenic |
| TACAAAGTATAAGGATCATT+TGG | 0.373848 | 1.4:+84614494 | None:intergenic |
| GATCAGTACACTTCCTTCAT+TGG | 0.374148 | 1.4:-84614245 | MS.gene029398:CDS |
| ACCTTGTTGCATTGGTAGAA+TGG | 0.383857 | 1.4:+84612032 | None:intergenic |
| ACAAGTGCAGTCCACTATAA+TGG | 0.387331 | 1.4:-84612777 | MS.gene029398:CDS |
| AGAAAAGAGGCCTAGAAATT+GGG | 0.388696 | 1.4:+84612289 | None:intergenic |
| TTAAATGGAAATGGAGCAAT+AGG | 0.388884 | 1.4:-84611745 | MS.gene029398:CDS |
| TACAGGACTTCTACAAGTTA+AGG | 0.389135 | 1.4:-84615032 | MS.gene029398:CDS |
| GAGAGACAAAGAGTGGATAA+TGG | 0.389754 | 1.4:+84615178 | None:intergenic |
| TCAATCCATAAGCCATCAAC+TGG | 0.391311 | 1.4:+84612993 | None:intergenic |
| GATGCTTCTCTGTATGGTTT+GGG | 0.391963 | 1.4:-84614551 | MS.gene029398:CDS |
| CAAGTCATTATTTCAAAAGA+TGG | 0.393569 | 1.4:-84612114 | MS.gene029398:CDS |
| AAGAAGGAACTGTGAAAGTT+TGG | 0.394722 | 1.4:-84611837 | MS.gene029398:CDS |
| CTCAGACACATTTGGTCCAC+TGG | 0.395057 | 1.4:-84614618 | MS.gene029398:CDS |
| CTTTGAAGCAGAACATTAAG+AGG | 0.405095 | 1.4:-84614775 | MS.gene029398:CDS |
| TCAGGATTACAAGCTCCTAT+AGG | 0.405226 | 1.4:-84612816 | MS.gene029398:CDS |
| TCTCCTTCATTTGCACCTGC+TGG | 0.405632 | 1.4:+84611955 | None:intergenic |
| ATTTCTCCTGTTCTTGAGCT+AGG | 0.406395 | 1.4:-84612198 | MS.gene029398:CDS |
| ATAGGTACCATTGAGATAGA+TGG | 0.407246 | 1.4:-84611727 | MS.gene029398:CDS |
| TCAGTGGTATACAAAGTATA+AGG | 0.411774 | 1.4:+84614485 | None:intergenic |
| TGTGTCTGAGTCATTAGAAT+TGG | 0.412803 | 1.4:+84614631 | None:intergenic |
| GTTCATCATCATCAATGAAT+AGG | 0.413581 | 1.4:+84611920 | None:intergenic |
| CCAGAAATGAAGCTTGGAAA+TGG | 0.414689 | 1.4:-84611895 | MS.gene029398:CDS |
| AAAGGTGGTGGTTGCTCCCT+AGG | 0.416767 | 1.4:+84614794 | None:intergenic |
| AACTATGAGGCTCATATTAG+TGG | 0.419212 | 1.4:-84612315 | MS.gene029398:CDS |
| GTGTTAGGATTAAATGGAAA+TGG | 0.422067 | 1.4:-84611754 | MS.gene029398:CDS |
| ATCATACCAAAAGCCCAATA+AGG | 0.422925 | 1.4:+84614206 | None:intergenic |
| GCATTGGACAGGTGACAATC+AGG | 0.426225 | 1.4:-84612616 | MS.gene029398:CDS |
| CACATGCAAGGGTGCATTAA+GGG | 0.430928 | 1.4:+84612080 | None:intergenic |
| CATAGTGATGGTTGGAATGA+AGG | 0.431184 | 1.4:-84611632 | MS.gene029398:CDS |
| GAAGCTTCAAATTTCTGCTC+TGG | 0.432143 | 1.4:-84612963 | MS.gene029398:CDS |
| AAGGCCCTTCAAGGGCTTCA+AGG | 0.433715 | 1.4:-84612696 | MS.gene029398:CDS |
| AATAAACTATACCATGTTCC+AGG | 0.435029 | 1.4:+84612147 | None:intergenic |
| GCAACTCACAAGGCCCTTCA+AGG | 0.440545 | 1.4:-84612705 | MS.gene029398:CDS |
| AAGGAGAAGAATGATATCTA+TGG | 0.442211 | 1.4:-84615013 | MS.gene029398:CDS |
| AAGCGTAGAAGGGGAATGTC+TGG | 0.444678 | 1.4:+84614989 | None:intergenic |
| CAAGAACAGGAGAAATCATT+AGG | 0.446334 | 1.4:+84612205 | None:intergenic |
| ATAGTTTAGGGTGTACAGAT+AGG | 0.447057 | 1.4:+84612332 | None:intergenic |
| GTCCTGTAATAGCACCATTA+GGG | 0.448389 | 1.4:+84615047 | None:intergenic |
| CTCTTAATGTTCTGCTTCAA+AGG | 0.448498 | 1.4:+84614776 | None:intergenic |
| ATCATTCCACCTTGTTGCAT+TGG | 0.448757 | 1.4:+84612024 | None:intergenic |
| AAGGTGTGCCCAAGTGGAAC+AGG | 0.448760 | 1.4:-84612918 | MS.gene029398:CDS |
| CCATACAGAGAAGCATCTTT+GGG | 0.449022 | 1.4:+84614557 | None:intergenic |
| ATTCCAAAATGCCATTATAG+TGG | 0.449801 | 1.4:+84612766 | None:intergenic |
| TCTAATGACTCAGACACATT+TGG | 0.450096 | 1.4:-84614626 | MS.gene029398:CDS |
| TGGTTTCCCATCTATCTCAA+TGG | 0.452061 | 1.4:+84611720 | None:intergenic |
| CATCATTAGCCATACCCCTT+TGG | 0.452655 | 1.4:+84613147 | None:intergenic |
| CAAAGCTCTTCAGTGGGTTG+TGG | 0.452865 | 1.4:+84612498 | None:intergenic |
| GTTTGCTTTGGATAAAGGTT+GGG | 0.454749 | 1.4:-84611794 | MS.gene029398:CDS |
| CATCAACTGGGACAAGTTCA+TGG | 0.455884 | 1.4:+84613006 | None:intergenic |
| TTTGCATGGTCCCTTGAGAA+TGG | 0.461057 | 1.4:+84612444 | None:intergenic |
| GAATCAGCAAGAAATGCATT+GGG | 0.462602 | 1.4:-84612375 | MS.gene029398:CDS |
| CAAGAAATGCATTGGGGATG+AGG | 0.468281 | 1.4:-84612368 | MS.gene029398:CDS |
| ACTTGCATGAAAGTCAATAT+AGG | 0.474923 | 1.4:+84611864 | None:intergenic |
| CAACCAGGTCCTGTTCCACT+TGG | 0.475155 | 1.4:+84612909 | None:intergenic |
| ATGTTCTGCTTCAAAGGTGG+TGG | 0.476297 | 1.4:+84614782 | None:intergenic |
| TCTATTCAAGATGACCCTAA+TGG | 0.477917 | 1.4:-84615061 | MS.gene029398:CDS |
| CAGGTGACAATCAGGGTACA+TGG | 0.478047 | 1.4:-84612608 | MS.gene029398:CDS |
| ATTGCTGTTAACTCCAGTTA+TGG | 0.478467 | 1.4:-84613176 | MS.gene029398:CDS |
| CTATAACATTCAATATAAGT+TGG | 0.479207 | 1.4:+84612258 | None:intergenic |
| TCCCTAGGCAAAAGATCATA+AGG | 0.479850 | 1.4:+84614809 | None:intergenic |
| TTGACCCGCTCTACTTATGT+TGG | 0.486226 | 1.4:-84612657 | MS.gene029398:CDS |
| GTGCTTTCTATCCATTCTCA+AGG | 0.488078 | 1.4:-84612455 | MS.gene029398:CDS |
| ATCTCAACACTGATCTATAT+GGG | 0.488362 | 1.4:-84614448 | MS.gene029398:CDS |
| CTGATGCAAAGAACAAAAGA+TGG | 0.489866 | 1.4:-84614838 | MS.gene029398:CDS |
| TATAACATTCAATATAAGTT+GGG | 0.490424 | 1.4:+84612259 | None:intergenic |
| CGAATCAGCAAGAAATGCAT+TGG | 0.490570 | 1.4:-84612376 | MS.gene029398:CDS |
| CAGTTATGGTGTATACCAAA+GGG | 0.490868 | 1.4:-84613162 | MS.gene029398:CDS |
| CAAATGAAGGAGAGGCTAAA+GGG | 0.490889 | 1.4:-84611945 | MS.gene029398:CDS |
| CCACTGAAGAGCTTTGCAAT+AGG | 0.494841 | 1.4:-84612491 | MS.gene029398:CDS |
| TACTGATCAACAACACTAAG+AGG | 0.496797 | 1.4:+84614260 | None:intergenic |
| GCTGCTCCCAAGTAAGAATT+GGG | 0.498928 | 1.4:+84612227 | None:intergenic |
| TACATGGATCTTAGAAATGA+AGG | 0.499719 | 1.4:-84614413 | MS.gene029398:CDS |
| TTGACATACAAGATTATTGG+AGG | 0.500018 | 1.4:-84614317 | MS.gene029398:CDS |
| AAATATGCAGCGCATTGGAC+AGG | 0.500413 | 1.4:-84612627 | MS.gene029398:CDS |
| AGTTTGCTTTGGATAAAGGT+TGG | 0.501919 | 1.4:-84611795 | MS.gene029398:CDS |
| GTGGGTAGTTAACTGGATTG+AGG | 0.503347 | 1.4:+84613273 | None:intergenic |
| CAACATCTTCTACAACAGAT+AGG | 0.504167 | 1.4:+84613378 | None:intergenic |
| TGCAATAGGTGGATTGAAGT+TGG | 0.505532 | 1.4:-84612477 | MS.gene029398:CDS |
| TGGGTCTCACCCTGTATACA+TGG | 0.507089 | 1.4:-84614429 | MS.gene029398:CDS |
| GAAAAGAACATAGTGATGGT+TGG | 0.508106 | 1.4:-84611640 | MS.gene029398:CDS |
| AAGGGCCTTGTGAGTTGCAA+TGG | 0.508279 | 1.4:+84612710 | None:intergenic |
| TACATACACGGACGAGGAGA+TGG | 0.510137 | 1.4:-84611664 | MS.gene029398:CDS |
| GCCCAATAAGGCATTGGAGC+TGG | 0.510842 | 1.4:+84614218 | None:intergenic |
| TTTCTCCTGTTCTTGAGCTA+GGG | 0.512133 | 1.4:-84612197 | MS.gene029398:CDS |
| GAACTTCCAGAAATGAAGCT+TGG | 0.516701 | 1.4:-84611901 | MS.gene029398:CDS |
| ATTCTTGGCTCAAGTTTGGC+CGG | 0.516954 | 1.4:-84613099 | MS.gene029398:CDS |
| ATATTTGGGGTGCCAATGGT+TGG | 0.517574 | 1.4:-84612543 | MS.gene029398:CDS |
| AACAAAACACCATGTGCATT+AGG | 0.518720 | 1.4:+84614383 | None:intergenic |
| TCCTAAAACAGTTTCTTGGT+GGG | 0.519260 | 1.4:-84613048 | MS.gene029398:CDS |
| ATCCTAAAACAGTTTCTTGG+TGG | 0.519347 | 1.4:-84613049 | MS.gene029398:CDS |
| TGGGTAGTTAACTGGATTGA+GGG | 0.520183 | 1.4:+84613274 | None:intergenic |
| CACTCTTTCCACCTGGAACA+TGG | 0.523724 | 1.4:-84612158 | MS.gene029398:CDS |
| TGGAGCTGGTCTACCAATGA+AGG | 0.528059 | 1.4:+84614232 | None:intergenic |
| TATTCCAAAATTCAGCATAG+TGG | 0.528216 | 1.4:+84612563 | None:intergenic |
| CATCTTGAATAGATATCAAA+CGG | 0.529181 | 1.4:+84615071 | None:intergenic |
| TGGAATATTTGGGGTGCCAA+TGG | 0.529991 | 1.4:-84612547 | MS.gene029398:CDS |
| TGCCCAAGTGGAACAGGACC+TGG | 0.530293 | 1.4:-84612912 | MS.gene029398:CDS |
| CTGAAGAGCTTTGCAATAGG+TGG | 0.530495 | 1.4:-84612488 | MS.gene029398:CDS |
| TCAGGAAAGTACACTGCTCC+CGG | 0.530887 | 1.4:+84613080 | None:intergenic |
| TAAGAAACAAAGTTAGAAGA+AGG | 0.530889 | 1.4:+84615152 | None:intergenic |
| TAGGTACCATTGAGATAGAT+GGG | 0.534381 | 1.4:-84611726 | MS.gene029398:CDS |
| TACATTGTGATAATTGATCC+TGG | 0.535776 | 1.4:-84613200 | MS.gene029398:CDS |
| ATAGTGATGGTTGGAATGAA+GGG | 0.536073 | 1.4:-84611631 | MS.gene029398:CDS |
| TGCTTTCTATCCATTCTCAA+GGG | 0.536525 | 1.4:-84612454 | MS.gene029398:CDS |
| TTCTTGGCTCAAGTTTGGCC+GGG | 0.536828 | 1.4:-84613098 | MS.gene029398:CDS |
| GCAAATGAAGGAGAGGCTAA+AGG | 0.537400 | 1.4:-84611946 | MS.gene029398:CDS |
| CCAAAAGCCCAATAAGGCAT+TGG | 0.538141 | 1.4:+84614212 | None:intergenic |
| TGGTGTATACCAAAGGGGTA+TGG | 0.538274 | 1.4:-84613156 | MS.gene029398:CDS |
| GGTAAGTGCACAATTCCTAC+AGG | 0.539062 | 1.4:-84612942 | MS.gene029398:CDS |
| TCATTCCATATAACATCAAG+TGG | 0.540109 | 1.4:+84613329 | None:intergenic |
| TTTGCTATGACCTGGAAGAT+GGG | 0.540274 | 1.4:-84611583 | MS.gene029398:CDS |
| TAGGATTCCACCAATGCAGA+TGG | 0.540727 | 1.4:-84613412 | MS.gene029398:CDS |
| GTTGTTGAATAGCAATGGAA+TGG | 0.541632 | 1.4:-84614363 | MS.gene029398:CDS |
| CTCATTGTGACATTTCCAGC+AGG | 0.542665 | 1.4:-84611970 | MS.gene029398:CDS |
| AATAATCTTGTATGTCAAAG+AGG | 0.542940 | 1.4:+84614322 | None:intergenic |
| ATGGTTGGTTCAGATATATG+TGG | 0.546708 | 1.4:-84612528 | MS.gene029398:CDS |
| GGCCAAACTTGAGCCAAGAA+TGG | 0.547868 | 1.4:+84613101 | None:intergenic |
| GACATACAAGATTATTGGAG+GGG | 0.549179 | 1.4:-84614315 | MS.gene029398:CDS |
| AAGGTAAGAGAGACAAAGAG+TGG | 0.550488 | 1.4:+84615171 | None:intergenic |
| TTTCCAGCAGGTGCAAATGA+AGG | 0.551846 | 1.4:-84611958 | MS.gene029398:CDS |
| GATAACCCCATCTGCATTGG+TGG | 0.551913 | 1.4:+84613405 | None:intergenic |
| TAGTTTAGGGTGTACAGATA+GGG | 0.553113 | 1.4:+84612333 | None:intergenic |
| CTGGGACAAGTTCATGGAAG+CGG | 0.554828 | 1.4:+84613012 | None:intergenic |
| CACTGGTAAAGTTCTTGTCT+AGG | 0.557100 | 1.4:+84612411 | None:intergenic |
| CTGGCAAATATGCAGCGCAT+TGG | 0.559080 | 1.4:-84612632 | MS.gene029398:CDS |
| GTTGGGAATGAGAAGAAAAG+AGG | 0.561118 | 1.4:+84612276 | None:intergenic |
| TAAGCACCCAATTCTTACTT+GGG | 0.563209 | 1.4:-84612233 | MS.gene029398:CDS |
| GTGAACATTGACCACATGCA+AGG | 0.563932 | 1.4:+84612068 | None:intergenic |
| AGGATTCCACCAATGCAGAT+GGG | 0.564418 | 1.4:-84613411 | MS.gene029398:CDS |
| CCTAAAACAGTTTCTTGGTG+GGG | 0.565502 | 1.4:-84613047 | MS.gene029398:CDS |
| CAACTCACAAGGCCCTTCAA+GGG | 0.567312 | 1.4:-84612704 | MS.gene029398:CDS |
| TTAATGTTCTGCTTCAAAGG+TGG | 0.568031 | 1.4:+84614779 | None:intergenic |
| CATATATCTGAACCAACCAT+TGG | 0.568580 | 1.4:+84612531 | None:intergenic |
| CTTGGGCACACCTTTCCTGT+AGG | 0.572378 | 1.4:+84612927 | None:intergenic |
| CAAAATTACATACACGGACG+AGG | 0.575505 | 1.4:-84611670 | MS.gene029398:CDS |
| ATGAGACTGAGAATCGTTTG+AGG | 0.575745 | 1.4:-84614871 | MS.gene029398:CDS |
| AGAACCAACATAAGTAGAGC+GGG | 0.575941 | 1.4:+84612653 | None:intergenic |
| GTTGATGCACTCTTTCCACC+TGG | 0.578199 | 1.4:-84612165 | MS.gene029398:CDS |
| TTTCATGCAAGTGTGAAAGA+AGG | 0.578257 | 1.4:-84611853 | MS.gene029398:CDS |
| ATCAACAACACTAAGAGGCG+TGG | 0.579909 | 1.4:+84614265 | None:intergenic |
| CCAGTTATGGTGTATACCAA+AGG | 0.580821 | 1.4:-84613163 | MS.gene029398:CDS |
| TATTGGTCTTTGAAAACCAG+TGG | 0.581118 | 1.4:+84614602 | None:intergenic |
| CTGGAAAGAATACACAACAT+TGG | 0.582134 | 1.4:-84613230 | MS.gene029398:CDS |
| TGAGACTGAGAATCGTTTGA+GGG | 0.582986 | 1.4:-84614870 | MS.gene029398:CDS |
| CCTATTGCAAAGCTCTTCAG+TGG | 0.583146 | 1.4:+84612491 | None:intergenic |
| TCAAACCATTGCAACTCACA+AGG | 0.584934 | 1.4:-84612715 | MS.gene029398:CDS |
| GAAAAGAGGCCTAGAAATTG+GGG | 0.589198 | 1.4:+84612290 | None:intergenic |
| GCAGTTAAAAGGAAGTCCAC+TGG | 0.589329 | 1.4:-84614671 | MS.gene029398:CDS |
| ATTATAGTGGACTGCACTTG+TGG | 0.589749 | 1.4:+84612779 | None:intergenic |
| CAGAACCAACATAAGTAGAG+CGG | 0.592513 | 1.4:+84612652 | None:intergenic |
| TGATGCAAAGAACAAAAGAT+GGG | 0.592705 | 1.4:-84614837 | MS.gene029398:CDS |
| TAGGAGAGTAGTAGTTTGCA+TGG | 0.596826 | 1.4:+84612430 | None:intergenic |
| ACAGGAAAGGTGTGCCCAAG+TGG | 0.597191 | 1.4:-84612924 | MS.gene029398:CDS |
| ATTCGGCTACCGTCTCCCAC+TGG | 0.597682 | 1.4:+84612394 | None:intergenic |
| TGTGATAACCCCATCTGCAT+TGG | 0.599649 | 1.4:+84613402 | None:intergenic |
| CTGGAGTTAACAGCAATACC+AGG | 0.601210 | 1.4:+84613182 | None:intergenic |
| TGAACATTGACCACATGCAA+GGG | 0.601566 | 1.4:+84612069 | None:intergenic |
| TGACATACAAGATTATTGGA+GGG | 0.601737 | 1.4:-84614316 | MS.gene029398:CDS |
| AAGGGCTTAAATATCCCTGT+AGG | 0.605232 | 1.4:-84611613 | MS.gene029398:CDS |
| AACCAGGTCCTGTTCCACTT+GGG | 0.611141 | 1.4:+84612910 | None:intergenic |
| GGAGAGAACACACAGCCACA+TGG | 0.612891 | 1.4:-84614530 | MS.gene029398:CDS |
| TGGAGAAAAGAACATAGTGA+TGG | 0.613062 | 1.4:-84611644 | MS.gene029398:CDS |
| CTATTGCAAAGCTCTTCAGT+GGG | 0.613210 | 1.4:+84612492 | None:intergenic |
| AAACATCACAAGCACACGGT+GGG | 0.616561 | 1.4:-84612865 | MS.gene029398:CDS |
| TTCTAAGATCCATGTATACA+GGG | 0.616903 | 1.4:+84614420 | None:intergenic |
| ACAAGGTGGAATGATATCAA+AGG | 0.616910 | 1.4:-84612016 | MS.gene029398:CDS |
| CATTGGACAGGTGACAATCA+GGG | 0.618247 | 1.4:-84612615 | MS.gene029398:CDS |
| AGCAGGTGCAAATGAAGGAG+AGG | 0.618963 | 1.4:-84611953 | MS.gene029398:CDS |
| GTGCACAATTCCTACAGGAA+AGG | 0.623409 | 1.4:-84612937 | MS.gene029398:CDS |
| TCTGTACACCCTAAACTATG+AGG | 0.624919 | 1.4:-84612328 | MS.gene029398:CDS |
| AAATGTCACAATGAGGCTGA+AGG | 0.625056 | 1.4:+84611978 | None:intergenic |
| GGATACAACTTTATCCCATG+TGG | 0.625392 | 1.4:+84614515 | None:intergenic |
| GGATTCCACCAATGCAGATG+GGG | 0.628625 | 1.4:-84613410 | MS.gene029398:CDS |
| CAATCCATAAGCCATCAACT+GGG | 0.630686 | 1.4:+84612994 | None:intergenic |
| TGATCACATGGATGGACACA+AGG | 0.631580 | 1.4:-84613303 | MS.gene029398:CDS |
| GAGAGAACACACAGCCACAT+GGG | 0.635497 | 1.4:-84614529 | MS.gene029398:CDS |
| AATGATGATGATCACATGGA+TGG | 0.638145 | 1.4:-84613311 | MS.gene029398:CDS |
| TTGACATAGAAGCGTAGAAG+GGG | 0.640120 | 1.4:+84614980 | None:intergenic |
| ATTAATGGCTGCTACATCAG+TGG | 0.640222 | 1.4:+84614469 | None:intergenic |
| CAAGTGGAACAGGACCTGGT+TGG | 0.645866 | 1.4:-84612908 | MS.gene029398:CDS |
| AGGTGACAATCAGGGTACAT+GGG | 0.648038 | 1.4:-84612607 | MS.gene029398:CDS |
| CTTGACATAGAAGCGTAGAA+GGG | 0.650085 | 1.4:+84614979 | None:intergenic |
| TAGACAAGAACTTTACCAGT+GGG | 0.654459 | 1.4:-84612409 | MS.gene029398:CDS |
| TCAACAACACTAAGAGGCGT+GGG | 0.655202 | 1.4:+84614266 | None:intergenic |
| GTTTGGTCACAAGTCCAAGA+GGG | 0.655566 | 1.4:-84611820 | MS.gene029398:CDS |
| AATGTCACAATGAGGCTGAA+GGG | 0.661240 | 1.4:+84611979 | None:intergenic |
| ACCATTCTACCAATGCAACA+AGG | 0.665037 | 1.4:-84612033 | MS.gene029398:CDS |
| AAACTATACCATGTTCCAGG+TGG | 0.669325 | 1.4:+84612150 | None:intergenic |
| ATGGAATGATGATGATCACA+TGG | 0.669871 | 1.4:-84613315 | MS.gene029398:CDS |
| AGAACTTTACCAGTGGGAGA+CGG | 0.673338 | 1.4:-84612403 | MS.gene029398:CDS |
| ACTAAACAAAATTACATACA+CGG | 0.676654 | 1.4:-84611676 | MS.gene029398:CDS |
| TCTAAGCAACATATCCAACC+AGG | 0.676689 | 1.4:+84612894 | None:intergenic |
| ATGGATCTTAGAAATGAAGG+TGG | 0.682988 | 1.4:-84614410 | MS.gene029398:CDS |
| GGGTGCATTAAGGGTCACGT+TGG | 0.683940 | 1.4:+84612089 | None:intergenic |
| AGTTTGGTCACAAGTCCAAG+AGG | 0.685776 | 1.4:-84611821 | MS.gene029398:CDS |
| CCTTAATGCACCCTTGCATG+TGG | 0.686026 | 1.4:-84612079 | MS.gene029398:CDS |
| CTAGACAAGAACTTTACCAG+TGG | 0.689103 | 1.4:-84612410 | MS.gene029398:CDS |
| AGTTATGGTGTATACCAAAG+GGG | 0.702184 | 1.4:-84613161 | MS.gene029398:CDS |
| CTGCTGGAAATGTCACAATG+AGG | 0.707489 | 1.4:+84611971 | None:intergenic |
| GGTGGCAAGCCTAATGCACA+TGG | 0.716525 | 1.4:-84614392 | MS.gene029398:CDS |
| AAAACATCACAAGCACACGG+TGG | 0.716740 | 1.4:-84612866 | MS.gene029398:CDS |
| AATCAGCAAGAAATGCATTG+GGG | 0.721034 | 1.4:-84612374 | MS.gene029398:CDS |
| ATTCTACCAATGCAACAAGG+TGG | 0.724778 | 1.4:-84612030 | MS.gene029398:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | CTTATTTTAATTTAATTGTT+TGG | - | chr1.4:84612796-84612815 | MS.gene029398:CDS | 10.0% |
| !! | TATAACATTCAATATAAGTT+GGG | + | chr1.4:84614513-84614532 | None:intergenic | 15.0% |
| !!! | AAATATTTTATTCCAATACA+TGG | + | chr1.4:84613175-84613194 | None:intergenic | 15.0% |
| !!! | TGTTTTAATATTTTAAGTCA+CGG | - | chr1.4:84612879-84612898 | MS.gene029398:CDS | 15.0% |
| !! | ACTAAACAAAATTACATACA+CGG | - | chr1.4:84615093-84615112 | MS.gene029398:CDS | 20.0% |
| !! | ATAAATGTGTTAGGATTAAA+TGG | - | chr1.4:84615009-84615028 | MS.gene029398:CDS | 20.0% |
| !! | ATGGATTCATTAAAACATAA+AGG | + | chr1.4:84613122-84613141 | None:intergenic | 20.0% |
| !! | CTATAACATTCAATATAAGT+TGG | + | chr1.4:84614514-84614533 | None:intergenic | 20.0% |
| !! | GGATAGTATATTGTATATAT+CGG | - | chr1.4:84613042-84613061 | MS.gene029398:CDS | 20.0% |
| !! | TAGTAGAAATTTCCAAATAT+TGG | + | chr1.4:84612187-84612206 | None:intergenic | 20.0% |
| !! | TATGTATCTGTATAAAAAGA+TGG | - | chr1.4:84613000-84613019 | MS.gene029398:CDS | 20.0% |
| !!! | AAAATAAGTGCCAATTTTTA+TGG | + | chr1.4:84612784-84612803 | None:intergenic | 20.0% |
| !!! | AAATAAGTGCCAATTTTTAT+GGG | + | chr1.4:84612783-84612802 | None:intergenic | 20.0% |
| !!! | AAGATTTCTTTTTTGAAGAA+GGG | - | chr1.4:84612696-84612715 | MS.gene029398:CDS | 20.0% |
| !!! | AATTTAATTGTTTGGTGATA+GGG | - | chr1.4:84612804-84612823 | MS.gene029398:CDS | 20.0% |
| !!! | GTTTTAATATTTTAAGTCAC+GGG | - | chr1.4:84612880-84612899 | MS.gene029398:CDS | 20.0% |
| !!! | TAAGATTTCTTTTTTGAAGA+AGG | - | chr1.4:84612695-84612714 | MS.gene029398:CDS | 20.0% |
| !!! | TAATTTAATTGTTTGGTGAT+AGG | - | chr1.4:84612803-84612822 | MS.gene029398:CDS | 20.0% |
| !!! | TACACAGAATAATTTTTTGA+TGG | + | chr1.4:84613291-84613310 | None:intergenic | 20.0% |
| !!! | TATTTTATTTGCTATGTGAT+AGG | - | chr1.4:84613338-84613357 | MS.gene029398:CDS | 20.0% |
| !!! | TTTATGTTTTAATGAATCCA+TGG | - | chr1.4:84613121-84613140 | MS.gene029398:CDS | 20.0% |
| ! | AAATCAAGGAACAAAGTATA+AGG | + | chr1.4:84611871-84611890 | None:intergenic | 25.0% |
| ! | AAATTCCACTTGATGTTATA+TGG | - | chr1.4:84613435-84613454 | MS.gene029398:intron | 25.0% |
| ! | AATAAAATAAGTGAGCATGT+TGG | + | chr1.4:84613327-84613346 | None:intergenic | 25.0% |
| ! | AATAATCTTGTATGTCAAAG+AGG | + | chr1.4:84612450-84612469 | None:intergenic | 25.0% |
| ! | ACTAATCCATTTATTCATGA+AGG | - | chr1.4:84613080-84613099 | MS.gene029398:CDS | 25.0% |
| ! | AGTATATTGTATATATCGGT+AGG | - | chr1.4:84613046-84613065 | MS.gene029398:CDS | 25.0% |
| ! | ATTGACACAATAAATGTGTT+AGG | - | chr1.4:84615000-84615019 | MS.gene029398:CDS | 25.0% |
| ! | CAAGTCATTATTTCAAAAGA+TGG | - | chr1.4:84614655-84614674 | MS.gene029398:CDS | 25.0% |
| ! | CATCTTGAATAGATATCAAA+CGG | + | chr1.4:84611701-84611720 | None:intergenic | 25.0% |
| ! | GTATATTGTATATATCGGTA+GGG | - | chr1.4:84613047-84613066 | MS.gene029398:CDS | 25.0% |
| ! | TAAATAGAAGACAGAATACT+AGG | + | chr1.4:84612677-84612696 | None:intergenic | 25.0% |
| ! | TAAGAAACAAAGTTAGAAGA+AGG | + | chr1.4:84611620-84611639 | None:intergenic | 25.0% |
| ! | TACAAAGTATAAGGATCATT+TGG | + | chr1.4:84612278-84612297 | None:intergenic | 25.0% |
| ! | TACAAATGTATTATCTACGT+AGG | + | chr1.4:84612976-84612995 | None:intergenic | 25.0% |
| ! | TATGATGCTCATAGTATTTA+TGG | - | chr1.4:84614025-84614044 | MS.gene029398:intron | 25.0% |
| ! | TCTTTGACATACAAGATTAT+TGG | - | chr1.4:84612449-84612468 | MS.gene029398:CDS | 25.0% |
| !! | ACTTTGTTCCTTGATTTTTA+AGG | - | chr1.4:84611874-84611893 | MS.gene029398:CDS | 25.0% |
| !! | CAAAATCTCAGATTTCTTTT+TGG | + | chr1.4:84612745-84612764 | None:intergenic | 25.0% |
| !! | TATAACATCAAGTGGAATTT+TGG | + | chr1.4:84613435-84613454 | None:intergenic | 25.0% |
| !! | TCCAAAACTTTTAAACTTTC+TGG | - | chr1.4:84613520-84613539 | MS.gene029398:intron | 25.0% |
| !! | TCCAGAAAGTTTAAAAGTTT+TGG | + | chr1.4:84613524-84613543 | None:intergenic | 25.0% |
| !!! | AAATCTGAGATTTTGATGAT+GGG | - | chr1.4:84612750-84612769 | MS.gene029398:CDS | 25.0% |
| !!! | AAGTTTAAAAGTTTTGGATG+TGG | + | chr1.4:84613518-84613537 | None:intergenic | 25.0% |
| !!! | AGTTTAAAAGTTTTGGATGT+GGG | + | chr1.4:84613517-84613536 | None:intergenic | 25.0% |
| !!! | ATGCTGAATTTTGGAATATT+TGG | - | chr1.4:84614211-84614230 | MS.gene029398:intron | 25.0% |
| !!! | GATGTTTTTATCAAACATGA+GGG | - | chr1.4:84613641-84613660 | MS.gene029398:intron | 25.0% |
| !!! | TGATGTTTTTATCAAACATG+AGG | - | chr1.4:84613640-84613659 | MS.gene029398:intron | 25.0% |
| !!! | TGCTGAATTTTGGAATATTT+GGG | - | chr1.4:84614212-84614231 | MS.gene029398:intron | 25.0% |
| AAGGAGAAGAATGATATCTA+TGG | - | chr1.4:84611756-84611775 | MS.gene029398:CDS | 30.0% | |
| AATAAACTATACCATGTTCC+AGG | + | chr1.4:84614625-84614644 | None:intergenic | 30.0% | |
| AATATGAGCCTCATAGTTTA+GGG | + | chr1.4:84614452-84614471 | None:intergenic | 30.0% | |
| AATCTCAACACTGATCTATA+TGG | - | chr1.4:84612320-84612339 | MS.gene029398:CDS | 30.0% | |
| ACTTGCATGAAAGTCAATAT+AGG | + | chr1.4:84614908-84614927 | None:intergenic | 30.0% | |
| ATCTCAACACTGATCTATAT+GGG | - | chr1.4:84612321-84612340 | MS.gene029398:CDS | 30.0% | |
| ATTATCTACGTAGGCATATT+TGG | + | chr1.4:84612967-84612986 | None:intergenic | 30.0% | |
| ATTCCAAAATGCCATTATAG+TGG | + | chr1.4:84614006-84614025 | None:intergenic | 30.0% | |
| CTATCAACTTTCACATTTGT+TGG | + | chr1.4:84615072-84615091 | None:intergenic | 30.0% | |
| CTTTCTCCTTCATGAATAAA+TGG | + | chr1.4:84613089-84613108 | None:intergenic | 30.0% | |
| GGTATCATACCCATAAAAAT+TGG | - | chr1.4:84612771-84612790 | MS.gene029398:CDS | 30.0% | |
| GTATAAGAGTAATAAGACCA+TGG | + | chr1.4:84613141-84613160 | None:intergenic | 30.0% | |
| GTGTTAGGATTAAATGGAAA+TGG | - | chr1.4:84615015-84615034 | MS.gene029398:CDS | 30.0% | |
| GTTCATCATCATCAATGAAT+AGG | + | chr1.4:84614852-84614871 | None:intergenic | 30.0% | |
| TAATATGAGCCTCATAGTTT+AGG | + | chr1.4:84614453-84614472 | None:intergenic | 30.0% | |
| TACATGGATCTTAGAAATGA+AGG | - | chr1.4:84612356-84612375 | MS.gene029398:CDS | 30.0% | |
| TACATTGTGATAATTGATCC+TGG | - | chr1.4:84613569-84613588 | MS.gene029398:intron | 30.0% | |
| TATTCCAAAATTCAGCATAG+TGG | + | chr1.4:84614209-84614228 | None:intergenic | 30.0% | |
| TCAATCCTAAAACAGTTTCT+TGG | - | chr1.4:84613717-84613736 | MS.gene029398:intron | 30.0% | |
| TCAGTGGTATACAAAGTATA+AGG | + | chr1.4:84612287-84612306 | None:intergenic | 30.0% | |
| TCATTCCATATAACATCAAG+TGG | + | chr1.4:84613443-84613462 | None:intergenic | 30.0% | |
| TGACATACAAGATTATTGGA+GGG | - | chr1.4:84612453-84612472 | MS.gene029398:CDS | 30.0% | |
| TGATGCAAAGAACAAAAGAT+GGG | - | chr1.4:84611932-84611951 | MS.gene029398:CDS | 30.0% | |
| TGTGACTTAATTTAGAGAGA+TGG | + | chr1.4:84613255-84613274 | None:intergenic | 30.0% | |
| TTAAATGGAAATGGAGCAAT+AGG | - | chr1.4:84615024-84615043 | MS.gene029398:CDS | 30.0% | |
| TTGACATACAAGATTATTGG+AGG | - | chr1.4:84612452-84612471 | MS.gene029398:CDS | 30.0% | |
| ! | ATAGCAAAACTTTTACCTAC+AGG | + | chr1.4:84615174-84615193 | None:intergenic | 30.0% |
| ! | ATATCCACTATGCTGAATTT+TGG | - | chr1.4:84614202-84614221 | MS.gene029398:intron | 30.0% |
| ! | CTTGATTTTTACTTCTTTGC+AGG | - | chr1.4:84612479-84612498 | MS.gene029398:CDS | 30.0% |
| ! | GAATGGATGTGTTTTACAAA+GGG | - | chr1.4:84612423-84612442 | MS.gene029398:CDS | 30.0% |
| ! | GGTTTTCAAAGACCAATATT+TGG | - | chr1.4:84612172-84612191 | MS.gene029398:CDS | 30.0% |
| ! | TAGATCAGTGTTGAGATTAA+TGG | + | chr1.4:84612318-84612337 | None:intergenic | 30.0% |
| ! | TAGCAAAACTTTTACCTACA+GGG | + | chr1.4:84615173-84615192 | None:intergenic | 30.0% |
| !! | CATTTAGCTTTGCAGTTAAA+AGG | - | chr1.4:84612087-84612106 | MS.gene029398:CDS | 30.0% |
| !! | CCTGAAGCATTAATTTTGTA+GGG | + | chr1.4:84613938-84613957 | None:intergenic | 30.0% |
| !! | CTTTTAACTGCAAAGCTAAA+TGG | + | chr1.4:84612089-84612108 | None:intergenic | 30.0% |
| !! | GAAATCTGAGATTTTGATGA+TGG | - | chr1.4:84612749-84612768 | MS.gene029398:CDS | 30.0% |
| !! | TCCTGAAGCATTAATTTTGT+AGG | + | chr1.4:84613939-84613958 | None:intergenic | 30.0% |
| !! | TTCTAAGATCCATGTATACA+GGG | + | chr1.4:84612352-84612371 | None:intergenic | 30.0% |
| !! | TTTCTAAGATCCATGTATAC+AGG | + | chr1.4:84612353-84612372 | None:intergenic | 30.0% |
| !!! | GCTATAGTTTTGAAACCTAT+AGG | + | chr1.4:84613971-84613990 | None:intergenic | 30.0% |
| !!! | GCTGAATTTTGGAATATTTG+GGG | - | chr1.4:84614213-84614232 | MS.gene029398:CDS | 30.0% |
| !!! | GTTTTAGGATTGAGAAAATC+AGG | + | chr1.4:84613710-84613729 | None:intergenic | 30.0% |
| !!! | GTTTTGTTGTTGAATAGCAA+TGG | - | chr1.4:84612401-84612420 | MS.gene029398:CDS | 30.0% |
| AACAAAACACCATGTGCATT+AGG | + | chr1.4:84612389-84612408 | None:intergenic | 35.0% | |
| AACTATGAGGCTCATATTAG+TGG | - | chr1.4:84614454-84614473 | MS.gene029398:CDS | 35.0% | |
| AAGAAAAGAGGCCTAGAAAT+TGG | + | chr1.4:84614484-84614503 | None:intergenic | 35.0% | |
| AAGAAGGAACTGTGAAAGTT+TGG | - | chr1.4:84614932-84614951 | MS.gene029398:intron | 35.0% | |
| AAGTCCACAAAAATTGGTCA+AGG | - | chr1.4:84611672-84611691 | MS.gene029398:CDS | 35.0% | |
| AATCAGCAAGAAATGCATTG+GGG | - | chr1.4:84614395-84614414 | MS.gene029398:CDS | 35.0% | |
| ACAAGGTGGAATGATATCAA+AGG | - | chr1.4:84614753-84614772 | MS.gene029398:CDS | 35.0% | |
| AGAAAAGAGGCCTAGAAATT+GGG | + | chr1.4:84614483-84614502 | None:intergenic | 35.0% | |
| AGAGAGATGGTGATAGTTTA+GGG | + | chr1.4:84613242-84613261 | None:intergenic | 35.0% | |
| AGTTATGGTGTATACCAAAG+GGG | - | chr1.4:84613608-84613627 | MS.gene029398:intron | 35.0% | |
| ATAACAGACACATGCCATAT+AGG | + | chr1.4:84612912-84612931 | None:intergenic | 35.0% | |
| ATAGGTACCATTGAGATAGA+TGG | - | chr1.4:84615042-84615061 | MS.gene029398:CDS | 35.0% | |
| ATAGTGATGGTTGGAATGAA+GGG | - | chr1.4:84615138-84615157 | MS.gene029398:CDS | 35.0% | |
| ATCATACCAAAAGCCCAATA+AGG | + | chr1.4:84612566-84612585 | None:intergenic | 35.0% | |
| ATCCTAAAACAGTTTCTTGG+TGG | - | chr1.4:84613720-84613739 | MS.gene029398:intron | 35.0% | |
| ATGGATCTTAGAAATGAAGG+TGG | - | chr1.4:84612359-84612378 | MS.gene029398:CDS | 35.0% | |
| CAACATCTTCTACAACAGAT+AGG | + | chr1.4:84613394-84613413 | None:intergenic | 35.0% | |
| CAAGAACAGGAGAAATCATT+AGG | + | chr1.4:84614567-84614586 | None:intergenic | 35.0% | |
| CAGTTATGGTGTATACCAAA+GGG | - | chr1.4:84613607-84613626 | MS.gene029398:intron | 35.0% | |
| CATATATCTGAACCAACCAT+TGG | + | chr1.4:84614241-84614260 | None:intergenic | 35.0% | |
| CATCAAAAGAGACCATGTAT+TGG | - | chr1.4:84613160-84613179 | MS.gene029398:CDS | 35.0% | |
| CCCTACAAAATTAATGCTTC+AGG | - | chr1.4:84613935-84613954 | MS.gene029398:intron | 35.0% | |
| CTCTTAATGTTCTGCTTCAA+AGG | + | chr1.4:84611996-84612015 | None:intergenic | 35.0% | |
| CTGATGCAAAGAACAAAAGA+TGG | - | chr1.4:84611931-84611950 | MS.gene029398:CDS | 35.0% | |
| CTGGAAAGAATACACAACAT+TGG | - | chr1.4:84613539-84613558 | MS.gene029398:intron | 35.0% | |
| GAAAAGAACATAGTGATGGT+TGG | - | chr1.4:84615129-84615148 | MS.gene029398:CDS | 35.0% | |
| GAATCAGCAAGAAATGCATT+GGG | - | chr1.4:84614394-84614413 | MS.gene029398:CDS | 35.0% | |
| GACATACAAGATTATTGGAG+GGG | - | chr1.4:84612454-84612473 | MS.gene029398:CDS | 35.0% | |
| GTCTCATGCCTTAAAAATCA+AGG | + | chr1.4:84611885-84611904 | None:intergenic | 35.0% | |
| GTTGTTGAATAGCAATGGAA+TGG | - | chr1.4:84612406-84612425 | MS.gene029398:CDS | 35.0% | |
| TAAGCACCCAATTCTTACTT+GGG | - | chr1.4:84614536-84614555 | MS.gene029398:CDS | 35.0% | |
| TACAGGACTTCTACAAGTTA+AGG | - | chr1.4:84611737-84611756 | MS.gene029398:CDS | 35.0% | |
| TACTGATCAACAACACTAAG+AGG | + | chr1.4:84612512-84612531 | None:intergenic | 35.0% | |
| TAGACAAGAACTTTACCAGT+GGG | - | chr1.4:84614360-84614379 | MS.gene029398:CDS | 35.0% | |
| TAGAGAGATGGTGATAGTTT+AGG | + | chr1.4:84613243-84613262 | None:intergenic | 35.0% | |
| TAGGTACCATTGAGATAGAT+GGG | - | chr1.4:84615043-84615062 | MS.gene029398:CDS | 35.0% | |
| TAGTTTAGGGACTAAAGTGA+TGG | + | chr1.4:84613229-84613248 | None:intergenic | 35.0% | |
| TATTGTATATATCGGTAGGG+AGG | - | chr1.4:84613050-84613069 | MS.gene029398:CDS | 35.0% | |
| TCCTAAAACAGTTTCTTGGT+GGG | - | chr1.4:84613721-84613740 | MS.gene029398:intron | 35.0% | |
| TCTAATGACTCAGACACATT+TGG | - | chr1.4:84612143-84612162 | MS.gene029398:CDS | 35.0% | |
| TCTATTCAAGATGACCCTAA+TGG | - | chr1.4:84611708-84611727 | MS.gene029398:CDS | 35.0% | |
| TCTCCAAAGTCCACAAAAAT+TGG | - | chr1.4:84611666-84611685 | MS.gene029398:CDS | 35.0% | |
| TGCTTTCTATCCATTCTCAA+GGG | - | chr1.4:84614315-84614334 | MS.gene029398:CDS | 35.0% | |
| TGGAGAAAAGAACATAGTGA+TGG | - | chr1.4:84615125-84615144 | MS.gene029398:CDS | 35.0% | |
| TGTGTCTGAGTCATTAGAAT+TGG | + | chr1.4:84612141-84612160 | None:intergenic | 35.0% | |
| TTAATGTTCTGCTTCAAAGG+TGG | + | chr1.4:84611993-84612012 | None:intergenic | 35.0% | |
| TTATGTGCAGAGCAATTTGT+GGG | - | chr1.4:84612928-84612947 | MS.gene029398:CDS | 35.0% | |
| TTTCATGCAAGTGTGAAAGA+AGG | - | chr1.4:84614916-84614935 | MS.gene029398:intron | 35.0% | |
| ! | AATGATGATGATCACATGGA+TGG | - | chr1.4:84613458-84613477 | MS.gene029398:intron | 35.0% |
| ! | AGTCCACTATAATGGCATTT+TGG | - | chr1.4:84614000-84614019 | MS.gene029398:intron | 35.0% |
| ! | AGTTTGCTTTGGATAAAGGT+TGG | - | chr1.4:84614974-84614993 | MS.gene029398:intron | 35.0% |
| ! | ATAGTTTAGGGTGTACAGAT+AGG | + | chr1.4:84614440-84614459 | None:intergenic | 35.0% |
| ! | ATGGAATGATGATGATCACA+TGG | - | chr1.4:84613454-84613473 | MS.gene029398:intron | 35.0% |
| ! | ATGGTTGGTTCAGATATATG+TGG | - | chr1.4:84614241-84614260 | MS.gene029398:CDS | 35.0% |
| ! | ATTGCTGTTAACTCCAGTTA+TGG | - | chr1.4:84613593-84613612 | MS.gene029398:intron | 35.0% |
| ! | CAATGCATTTCTTGCTGATT+CGG | + | chr1.4:84614395-84614414 | None:intergenic | 35.0% |
| ! | GGAATGGATGTGTTTTACAA+AGG | - | chr1.4:84612422-84612441 | MS.gene029398:CDS | 35.0% |
| ! | GTAACCTTGACCAATTTTTG+TGG | + | chr1.4:84611679-84611698 | None:intergenic | 35.0% |
| ! | GTTTGCTTTGGATAAAGGTT+GGG | - | chr1.4:84614975-84614994 | MS.gene029398:intron | 35.0% |
| ! | TAGTTTAGGGTGTACAGATA+GGG | + | chr1.4:84614439-84614458 | None:intergenic | 35.0% |
| ! | TCCTTATGATCTTTTGCCTA+GGG | - | chr1.4:84611959-84611978 | MS.gene029398:CDS | 35.0% |
| ! | TGACCAATTTTTGTGGACTT+TGG | + | chr1.4:84611672-84611691 | None:intergenic | 35.0% |
| ! | TTCCTTATGATCTTTTGCCT+AGG | - | chr1.4:84611958-84611977 | MS.gene029398:CDS | 35.0% |
| !! | ATATTTTAAGTCACGGGACT+TGG | - | chr1.4:84612886-84612905 | MS.gene029398:CDS | 35.0% |
| !! | CTTTGAAGCAGAACATTAAG+AGG | - | chr1.4:84611994-84612013 | MS.gene029398:CDS | 35.0% |
| !! | GAAGCATTAATTTTGTAGGG+AGG | + | chr1.4:84613935-84613954 | None:intergenic | 35.0% |
| !! | GTAAAAGTTTTGCTATGACC+TGG | - | chr1.4:84615178-84615197 | MS.gene029398:CDS | 35.0% |
| !! | TATTGGTCTTTGAAAACCAG+TGG | + | chr1.4:84612170-84612189 | None:intergenic | 35.0% |
| AAACTATACCATGTTCCAGG+TGG | + | chr1.4:84614622-84614641 | None:intergenic | 40.0% | |
| AAATGTCACAATGAGGCTGA+AGG | + | chr1.4:84614794-84614813 | None:intergenic | 40.0% | |
| AACCATTCTTGGCTCAAGTT+TGG | - | chr1.4:84613666-84613685 | MS.gene029398:intron | 40.0% | |
| AAGGGCTTAAATATCCCTGT+AGG | - | chr1.4:84615156-84615175 | MS.gene029398:CDS | 40.0% | |
| AAGGTAAGAGAGACAAAGAG+TGG | + | chr1.4:84611601-84611620 | None:intergenic | 40.0% | |
| AATAAGTGAGCATGTTGGTC+AGG | + | chr1.4:84613322-84613341 | None:intergenic | 40.0% | |
| AATGTCACAATGAGGCTGAA+GGG | + | chr1.4:84614793-84614812 | None:intergenic | 40.0% | |
| ACAAGTGCAGTCCACTATAA+TGG | - | chr1.4:84613992-84614011 | MS.gene029398:intron | 40.0% | |
| ACCATTCTACCAATGCAACA+AGG | - | chr1.4:84614736-84614755 | MS.gene029398:CDS | 40.0% | |
| AGAACCAACATAAGTAGAGC+GGG | + | chr1.4:84614119-84614138 | None:intergenic | 40.0% | |
| AGATGCTTCTCTGTATGGTT+TGG | - | chr1.4:84612217-84612236 | MS.gene029398:CDS | 40.0% | |
| AGTCCTGTAATAGCACCATT+AGG | + | chr1.4:84611726-84611745 | None:intergenic | 40.0% | |
| ATCATTCCACCTTGTTGCAT+TGG | + | chr1.4:84614748-84614767 | None:intergenic | 40.0% | |
| ATGAGACTGAGAATCGTTTG+AGG | - | chr1.4:84611898-84611917 | MS.gene029398:CDS | 40.0% | |
| ATTAATGGCTGCTACATCAG+TGG | + | chr1.4:84612303-84612322 | None:intergenic | 40.0% | |
| ATTCTACCAATGCAACAAGG+TGG | - | chr1.4:84614739-84614758 | MS.gene029398:CDS | 40.0% | |
| ATTTCTCCTGTTCTTGAGCT+AGG | - | chr1.4:84614571-84614590 | MS.gene029398:CDS | 40.0% | |
| CAAAATTACATACACGGACG+AGG | - | chr1.4:84615099-84615118 | MS.gene029398:CDS | 40.0% | |
| CAAATGAAGGAGAGGCTAAA+GGG | - | chr1.4:84614824-84614843 | MS.gene029398:CDS | 40.0% | |
| CAATCCATAAGCCATCAACT+GGG | + | chr1.4:84613778-84613797 | None:intergenic | 40.0% | |
| CACTGGTAAAGTTCTTGTCT+AGG | + | chr1.4:84614361-84614380 | None:intergenic | 40.0% | |
| CAGAACCAACATAAGTAGAG+CGG | + | chr1.4:84614120-84614139 | None:intergenic | 40.0% | |
| CATAGTGATGGTTGGAATGA+AGG | - | chr1.4:84615137-84615156 | MS.gene029398:CDS | 40.0% | |
| CCAGAAATGAAGCTTGGAAA+TGG | - | chr1.4:84614874-84614893 | MS.gene029398:CDS | 40.0% | |
| CCAGTTATGGTGTATACCAA+AGG | - | chr1.4:84613606-84613625 | MS.gene029398:intron | 40.0% | |
| CCATTTCCAAGCTTCATTTC+TGG | + | chr1.4:84614877-84614896 | None:intergenic | 40.0% | |
| CCTAAAACAGTTTCTTGGTG+GGG | - | chr1.4:84613722-84613741 | MS.gene029398:intron | 40.0% | |
| CCTTTGGTATACACCATAAC+TGG | + | chr1.4:84613609-84613628 | None:intergenic | 40.0% | |
| CGAATCAGCAAGAAATGCAT+TGG | - | chr1.4:84614393-84614412 | MS.gene029398:CDS | 40.0% | |
| CTAAGCACCCAATTCTTACT+TGG | - | chr1.4:84614535-84614554 | MS.gene029398:CDS | 40.0% | |
| CTAGACAAGAACTTTACCAG+TGG | - | chr1.4:84614359-84614378 | MS.gene029398:CDS | 40.0% | |
| CTATTGCAAAGCTCTTCAGT+GGG | + | chr1.4:84614280-84614299 | None:intergenic | 40.0% | |
| GAAAAGAGGCCTAGAAATTG+GGG | + | chr1.4:84614482-84614501 | None:intergenic | 40.0% | |
| GAACTTCCAGAAATGAAGCT+TGG | - | chr1.4:84614868-84614887 | MS.gene029398:CDS | 40.0% | |
| GAAGCTTCAAATTTCTGCTC+TGG | - | chr1.4:84613806-84613825 | MS.gene029398:intron | 40.0% | |
| GAGAGACAAAGAGTGGATAA+TGG | + | chr1.4:84611594-84611613 | None:intergenic | 40.0% | |
| GATCAGTACACTTCCTTCAT+TGG | - | chr1.4:84612524-84612543 | MS.gene029398:CDS | 40.0% | |
| GATGCTTCTCTGTATGGTTT+GGG | - | chr1.4:84612218-84612237 | MS.gene029398:CDS | 40.0% | |
| GCAAAAACATCACAAGCACA+CGG | - | chr1.4:84613900-84613919 | MS.gene029398:intron | 40.0% | |
| GGATACAACTTTATCCCATG+TGG | + | chr1.4:84612257-84612276 | None:intergenic | 40.0% | |
| GGCATTGTCTCGTGATTTAT+GGG | - | chr1.4:84613021-84613040 | MS.gene029398:CDS | 40.0% | |
| GTAGAGCGGGTCAAAATAAA+AGG | + | chr1.4:84614106-84614125 | None:intergenic | 40.0% | |
| GTCCTGTAATAGCACCATTA+GGG | + | chr1.4:84611725-84611744 | None:intergenic | 40.0% | |
| GTGCTTTCTATCCATTCTCA+AGG | - | chr1.4:84614314-84614333 | MS.gene029398:CDS | 40.0% | |
| GTTATGTGCAGAGCAATTTG+TGG | - | chr1.4:84612927-84612946 | MS.gene029398:CDS | 40.0% | |
| GTTGGGAATGAGAAGAAAAG+AGG | + | chr1.4:84614496-84614515 | None:intergenic | 40.0% | |
| TCAAACCATTGCAACTCACA+AGG | - | chr1.4:84614054-84614073 | MS.gene029398:intron | 40.0% | |
| TCAATCCATAAGCCATCAAC+TGG | + | chr1.4:84613779-84613798 | None:intergenic | 40.0% | |
| TCAGGATTACAAGCTCCTAT+AGG | - | chr1.4:84613953-84613972 | MS.gene029398:intron | 40.0% | |
| TCCCTAGGCAAAAGATCATA+AGG | + | chr1.4:84611963-84611982 | None:intergenic | 40.0% | |
| TCTAAGCAACATATCCAACC+AGG | + | chr1.4:84613878-84613897 | None:intergenic | 40.0% | |
| TCTGTACACCCTAAACTATG+AGG | - | chr1.4:84614441-84614460 | MS.gene029398:CDS | 40.0% | |
| TGAACATTGACCACATGCAA+GGG | + | chr1.4:84614703-84614722 | None:intergenic | 40.0% | |
| TGAGACTGAGAATCGTTTGA+GGG | - | chr1.4:84611899-84611918 | MS.gene029398:CDS | 40.0% | |
| TGGCATTGTCTCGTGATTTA+TGG | - | chr1.4:84613020-84613039 | MS.gene029398:CDS | 40.0% | |
| TGGGTAGTTAACTGGATTGA+GGG | + | chr1.4:84613498-84613517 | None:intergenic | 40.0% | |
| TGGTTTCCCATCTATCTCAA+TGG | + | chr1.4:84615052-84615071 | None:intergenic | 40.0% | |
| TTCAAGGGCTTCAAGGAAAA+AGG | - | chr1.4:84614080-84614099 | MS.gene029398:intron | 40.0% | |
| TTTCTCCTGTTCTTGAGCTA+GGG | - | chr1.4:84614572-84614591 | MS.gene029398:CDS | 40.0% | |
| TTTGGATGTGGGTAGTTAAC+TGG | + | chr1.4:84613506-84613525 | None:intergenic | 40.0% | |
| ! | ACCTTGTTGCATTGGTAGAA+TGG | + | chr1.4:84614740-84614759 | None:intergenic | 40.0% |
| ! | ACTTGACATAGAAGCGTAGA+AGG | + | chr1.4:84611794-84611813 | None:intergenic | 40.0% |
| ! | CTTGACATAGAAGCGTAGAA+GGG | + | chr1.4:84611793-84611812 | None:intergenic | 40.0% |
| ! | GGCAAGTTTGCTTTGGATAA+AGG | - | chr1.4:84614970-84614989 | MS.gene029398:intron | 40.0% |
| ! | TAGGAGAGTAGTAGTTTGCA+TGG | + | chr1.4:84614342-84614361 | None:intergenic | 40.0% |
| ! | TTGACATAGAAGCGTAGAAG+GGG | + | chr1.4:84611792-84611811 | None:intergenic | 40.0% |
| ! | TTTGCTATGACCTGGAAGAT+GGG | - | chr1.4:84615186-84615205 | MS.gene029398:CDS | 40.0% |
| ! | TTTTCCTTGAAGCCCTTGAA+GGG | + | chr1.4:84614080-84614099 | None:intergenic | 40.0% |
| ! | TTTTTCCTTGAAGCCCTTGA+AGG | + | chr1.4:84614081-84614100 | None:intergenic | 40.0% |
| !! | ACCATACAGAGAAGCATCTT+TGG | + | chr1.4:84612216-84612235 | None:intergenic | 40.0% |
| !! | ATTATAGTGGACTGCACTTG+TGG | + | chr1.4:84613993-84614012 | None:intergenic | 40.0% |
| !! | CCATACAGAGAAGCATCTTT+GGG | + | chr1.4:84612215-84612234 | None:intergenic | 40.0% |
| !! | GTCAAAAAGAGTATCACCAG+TGG | + | chr1.4:84612117-84612136 | None:intergenic | 40.0% |
| !! | TGCAATAGGTGGATTGAAGT+TGG | - | chr1.4:84614292-84614311 | MS.gene029398:CDS | 40.0% |
| !! | TTTTGCTATGACCTGGAAGA+TGG | - | chr1.4:84615185-84615204 | MS.gene029398:CDS | 40.0% |
| AAAACATCACAAGCACACGG+TGG | - | chr1.4:84613903-84613922 | MS.gene029398:intron | 45.0% | |
| AAACATCACAAGCACACGGT+GGG | - | chr1.4:84613904-84613923 | MS.gene029398:intron | 45.0% | |
| AAATATGCAGCGCATTGGAC+AGG | - | chr1.4:84614142-84614161 | MS.gene029398:intron | 45.0% | |
| ACATGAGGGTGAACCATTCT+TGG | - | chr1.4:84613655-84613674 | MS.gene029398:intron | 45.0% | |
| AGAACTTTACCAGTGGGAGA+CGG | - | chr1.4:84614366-84614385 | MS.gene029398:CDS | 45.0% | |
| AGGATTCCACCAATGCAGAT+GGG | - | chr1.4:84613358-84613377 | MS.gene029398:CDS | 45.0% | |
| AGGTGACAATCAGGGTACAT+GGG | - | chr1.4:84614162-84614181 | MS.gene029398:intron | 45.0% | |
| AGTTTGGTCACAAGTCCAAG+AGG | - | chr1.4:84614948-84614967 | MS.gene029398:intron | 45.0% | |
| ATCAACAACACTAAGAGGCG+TGG | + | chr1.4:84612507-84612526 | None:intergenic | 45.0% | |
| ATGTTCTGCTTCAAAGGTGG+TGG | + | chr1.4:84611990-84612009 | None:intergenic | 45.0% | |
| ATTCTTGGCTCAAGTTTGGC+CGG | - | chr1.4:84613670-84613689 | MS.gene029398:intron | 45.0% | |
| CAAGAAATGCATTGGGGATG+AGG | - | chr1.4:84614401-84614420 | MS.gene029398:CDS | 45.0% | |
| CATCAACTGGGACAAGTTCA+TGG | + | chr1.4:84613766-84613785 | None:intergenic | 45.0% | |
| CATCATTAGCCATACCCCTT+TGG | + | chr1.4:84613625-84613644 | None:intergenic | 45.0% | |
| CATGAACTTGTCCCAGTTGA+TGG | - | chr1.4:84613764-84613783 | MS.gene029398:intron | 45.0% | |
| CATTGGACAGGTGACAATCA+GGG | - | chr1.4:84614154-84614173 | MS.gene029398:intron | 45.0% | |
| CCAAAAGCCCAATAAGGCAT+TGG | + | chr1.4:84612560-84612579 | None:intergenic | 45.0% | |
| CCACTGAAGAGCTTTGCAAT+AGG | - | chr1.4:84614278-84614297 | MS.gene029398:CDS | 45.0% | |
| CCCAAAGATGCTTCTCTGTA+TGG | - | chr1.4:84612212-84612231 | MS.gene029398:CDS | 45.0% | |
| CCTATTGCAAAGCTCTTCAG+TGG | + | chr1.4:84614281-84614300 | None:intergenic | 45.0% | |
| CTCATTGTGACATTTCCAGC+AGG | - | chr1.4:84614799-84614818 | MS.gene029398:CDS | 45.0% | |
| CTGAAGAGCTTTGCAATAGG+TGG | - | chr1.4:84614281-84614300 | MS.gene029398:CDS | 45.0% | |
| CTGCTGGAAATGTCACAATG+AGG | + | chr1.4:84614801-84614820 | None:intergenic | 45.0% | |
| CTGGAGTTAACAGCAATACC+AGG | + | chr1.4:84613590-84613609 | None:intergenic | 45.0% | |
| GCAAATGAAGGAGAGGCTAA+AGG | - | chr1.4:84614823-84614842 | MS.gene029398:CDS | 45.0% | |
| GCAGTTAAAAGGAAGTCCAC+TGG | - | chr1.4:84612098-84612117 | MS.gene029398:CDS | 45.0% | |
| GCTGCTCCCAAGTAAGAATT+GGG | + | chr1.4:84614545-84614564 | None:intergenic | 45.0% | |
| GGTAAGTGCACAATTCCTAC+AGG | - | chr1.4:84613827-84613846 | MS.gene029398:intron | 45.0% | |
| GTGAACATTGACCACATGCA+AGG | + | chr1.4:84614704-84614723 | None:intergenic | 45.0% | |
| GTGCACAATTCCTACAGGAA+AGG | - | chr1.4:84613832-84613851 | MS.gene029398:intron | 45.0% | |
| GTGGGTAGTTAACTGGATTG+AGG | + | chr1.4:84613499-84613518 | None:intergenic | 45.0% | |
| GTTTGGTCACAAGTCCAAGA+GGG | - | chr1.4:84614949-84614968 | MS.gene029398:intron | 45.0% | |
| TAGGATTCCACCAATGCAGA+TGG | - | chr1.4:84613357-84613376 | MS.gene029398:CDS | 45.0% | |
| TGATCACATGGATGGACACA+AGG | - | chr1.4:84613466-84613485 | MS.gene029398:intron | 45.0% | |
| TGGTGTATACCAAAGGGGTA+TGG | - | chr1.4:84613613-84613632 | MS.gene029398:intron | 45.0% | |
| TGTGATAACCCCATCTGCAT+TGG | + | chr1.4:84613370-84613389 | None:intergenic | 45.0% | |
| TTAGTGGAGCCCCAATTTCT+AGG | - | chr1.4:84614470-84614489 | MS.gene029398:CDS | 45.0% | |
| TTGACCCGCTCTACTTATGT+TGG | - | chr1.4:84614112-84614131 | MS.gene029398:intron | 45.0% | |
| TTTCCAGCAGGTGCAAATGA+AGG | - | chr1.4:84614811-84614830 | MS.gene029398:CDS | 45.0% | |
| TTTGCATGGTCCCTTGAGAA+TGG | + | chr1.4:84614328-84614347 | None:intergenic | 45.0% | |
| ! | ACCAGCTCCAATGCCTTATT+GGG | - | chr1.4:84612550-84612569 | MS.gene029398:CDS | 45.0% |
| ! | ATATTTGGGGTGCCAATGGT+TGG | - | chr1.4:84614226-84614245 | MS.gene029398:CDS | 45.0% |
| ! | CACATGCAAGGGTGCATTAA+GGG | + | chr1.4:84614692-84614711 | None:intergenic | 45.0% |
| ! | CCCCACCAAGAAACTGTTTT+AGG | + | chr1.4:84613725-84613744 | None:intergenic | 45.0% |
| ! | GTTTTCCCTAGCTCAAGAAC+AGG | + | chr1.4:84614580-84614599 | None:intergenic | 45.0% |
| ! | TCAACAACACTAAGAGGCGT+GGG | + | chr1.4:84612506-84612525 | None:intergenic | 45.0% |
| ! | TGGAATATTTGGGGTGCCAA+TGG | - | chr1.4:84614222-84614241 | MS.gene029398:CDS | 45.0% |
| !! | CCAATGCCTTATTGGGCTTT+TGG | - | chr1.4:84612557-84612576 | MS.gene029398:CDS | 45.0% |
| !! | CGCTCTACTTATGTTGGTTC+TGG | - | chr1.4:84614118-84614137 | MS.gene029398:intron | 45.0% |
| !! | GACCCTAATGGTGCTATTAC+AGG | - | chr1.4:84611720-84611739 | MS.gene029398:CDS | 45.0% |
| !! | TTGTCCCAGTTGATGGCTTA+TGG | - | chr1.4:84613771-84613790 | MS.gene029398:intron | 45.0% |
| AACCAGGTCCTGTTCCACTT+GGG | + | chr1.4:84613862-84613881 | None:intergenic | 50.0% | |
| AAGCGTAGAAGGGGAATGTC+TGG | + | chr1.4:84611783-84611802 | None:intergenic | 50.0% | |
| AGCAGGTGCAAATGAAGGAG+AGG | - | chr1.4:84614816-84614835 | MS.gene029398:CDS | 50.0% | |
| CAACTCACAAGGCCCTTCAA+GGG | - | chr1.4:84614065-84614084 | MS.gene029398:intron | 50.0% | |
| CACTCTTTCCACCTGGAACA+TGG | - | chr1.4:84614611-84614630 | MS.gene029398:CDS | 50.0% | |
| CAGGTGACAATCAGGGTACA+TGG | - | chr1.4:84614161-84614180 | MS.gene029398:intron | 50.0% | |
| CCAAAGCAAACTTGCCCTCT+TGG | + | chr1.4:84614966-84614985 | None:intergenic | 50.0% | |
| CCTTAATGCACCCTTGCATG+TGG | - | chr1.4:84614690-84614709 | MS.gene029398:CDS | 50.0% | |
| CTCAGACACATTTGGTCCAC+TGG | - | chr1.4:84612151-84612170 | MS.gene029398:CDS | 50.0% | |
| CTGGCAAATATGCAGCGCAT+TGG | - | chr1.4:84614137-84614156 | MS.gene029398:intron | 50.0% | |
| CTGGGACAAGTTCATGGAAG+CGG | + | chr1.4:84613760-84613779 | None:intergenic | 50.0% | |
| GACCAGCTCCAATGCCTTAT+TGG | - | chr1.4:84612549-84612568 | MS.gene029398:CDS | 50.0% | |
| GAGAGAACACACAGCCACAT+GGG | - | chr1.4:84612240-84612259 | MS.gene029398:CDS | 50.0% | |
| GATAACCCCATCTGCATTGG+TGG | + | chr1.4:84613367-84613386 | None:intergenic | 50.0% | |
| GCATTGGACAGGTGACAATC+AGG | - | chr1.4:84614153-84614172 | MS.gene029398:intron | 50.0% | |
| GGATTCCACCAATGCAGATG+GGG | - | chr1.4:84613359-84613378 | MS.gene029398:CDS | 50.0% | |
| GGCCAAACTTGAGCCAAGAA+TGG | + | chr1.4:84613671-84613690 | None:intergenic | 50.0% | |
| GGCTGCTCCCAAGTAAGAAT+TGG | + | chr1.4:84614546-84614565 | None:intergenic | 50.0% | |
| GTTGATGCACTCTTTCCACC+TGG | - | chr1.4:84614604-84614623 | MS.gene029398:CDS | 50.0% | |
| TACATACACGGACGAGGAGA+TGG | - | chr1.4:84615105-84615124 | MS.gene029398:CDS | 50.0% | |
| TCTCCTTCATTTGCACCTGC+TGG | + | chr1.4:84614817-84614836 | None:intergenic | 50.0% | |
| TGGGTCTCACCCTGTATACA+TGG | - | chr1.4:84612340-84612359 | MS.gene029398:CDS | 50.0% | |
| TTCTTGGCTCAAGTTTGGCC+GGG | - | chr1.4:84613671-84613690 | MS.gene029398:intron | 50.0% | |
| ! | AAGGGCCTTGTGAGTTGCAA+TGG | + | chr1.4:84614062-84614081 | None:intergenic | 50.0% |
| ! | CCAAGAGGGCAAGTTTGCTT+TGG | - | chr1.4:84614963-84614982 | MS.gene029398:intron | 50.0% |
| ! | CCACATGCAAGGGTGCATTA+AGG | + | chr1.4:84614693-84614712 | None:intergenic | 50.0% |
| ! | TCAGGAAAGTACACTGCTCC+CGG | + | chr1.4:84613692-84613711 | None:intergenic | 50.0% |
| ! | TGGAGCTGGTCTACCAATGA+AGG | + | chr1.4:84612540-84612559 | None:intergenic | 50.0% |
| ! | TTGTTTGGTGATAGGGCTCG+TGG | - | chr1.4:84612811-84612830 | MS.gene029398:CDS | 50.0% |
| !! | CAAAGCTCTTCAGTGGGTTG+TGG | + | chr1.4:84614274-84614293 | None:intergenic | 50.0% |
| AAGGCCCTTCAAGGGCTTCA+AGG | - | chr1.4:84614073-84614092 | MS.gene029398:intron | 55.0% | |
| AAGGTGTGCCCAAGTGGAAC+AGG | - | chr1.4:84613851-84613870 | MS.gene029398:intron | 55.0% | |
| CAACCAGGTCCTGTTCCACT+TGG | + | chr1.4:84613863-84613882 | None:intergenic | 55.0% | |
| CAAGTGGAACAGGACCTGGT+TGG | - | chr1.4:84613861-84613880 | MS.gene029398:intron | 55.0% | |
| CTTGGGCACACCTTTCCTGT+AGG | + | chr1.4:84613845-84613864 | None:intergenic | 55.0% | |
| GCAACTCACAAGGCCCTTCA+AGG | - | chr1.4:84614064-84614083 | MS.gene029398:intron | 55.0% | |
| GGAGAGAACACACAGCCACA+TGG | - | chr1.4:84612239-84612258 | MS.gene029398:CDS | 55.0% | |
| GGGTGCATTAAGGGTCACGT+TGG | + | chr1.4:84614683-84614702 | None:intergenic | 55.0% | |
| GGTGGCAAGCCTAATGCACA+TGG | - | chr1.4:84612377-84612396 | MS.gene029398:CDS | 55.0% | |
| GTCACGGGACTTGGCCTATA+TGG | - | chr1.4:84612895-84612914 | MS.gene029398:CDS | 55.0% | |
| ! | AAAGGTGGTGGTTGCTCCCT+AGG | + | chr1.4:84611978-84611997 | None:intergenic | 55.0% |
| ! | ACAGGAAAGGTGTGCCCAAG+TGG | - | chr1.4:84613845-84613864 | MS.gene029398:intron | 55.0% |
| !! | GCCCAATAAGGCATTGGAGC+TGG | + | chr1.4:84612554-84612573 | None:intergenic | 55.0% |
| ATTCGGCTACCGTCTCCCAC+TGG | + | chr1.4:84614378-84614397 | None:intergenic | 60.0% | |
| TGCCCAAGTGGAACAGGACC+TGG | - | chr1.4:84613857-84613876 | MS.gene029398:intron | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 84611576 | 84615215 | 84611576 | ID=MS.gene029398 |
| chr1.4 | mRNA | 84611576 | 84615215 | 84611576 | ID=MS.gene029398.t1;Parent=MS.gene029398 |
| chr1.4 | exon | 84614980 | 84615215 | 84614980 | ID=MS.gene029398.t1.exon1;Parent=MS.gene029398.t1 |
| chr1.4 | CDS | 84614980 | 84615215 | 84614980 | ID=cds.MS.gene029398.t1;Parent=MS.gene029398.t1 |
| chr1.4 | exon | 84614213 | 84614895 | 84614213 | ID=MS.gene029398.t1.exon2;Parent=MS.gene029398.t1 |
| chr1.4 | CDS | 84614213 | 84614895 | 84614213 | ID=cds.MS.gene029398.t1;Parent=MS.gene029398.t1 |
| chr1.4 | exon | 84611576 | 84613431 | 84611576 | ID=MS.gene029398.t1.exon3;Parent=MS.gene029398.t1 |
| chr1.4 | CDS | 84611576 | 84613431 | 84611576 | ID=cds.MS.gene029398.t1;Parent=MS.gene029398.t1 |
| Gene Sequence |
| Protein sequence |
