Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047991.t1 | RHN72936.1 | 95.9 | 829 | 33 | 1 | 13 | 840 | 85 | 913 | 0.00E+00 | 1640.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047991.t1 | O04893 | 60.4 | 830 | 310 | 5 | 14 | 835 | 82 | 900 | 3.4e-304 | 1045.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047991.t1 | A0A396J4F2 | 95.9 | 829 | 33 | 1 | 13 | 840 | 85 | 913 | 0.0e+00 | 1640.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene047991 | MS.gene71838 | PPI |
| MS.gene053789 | MS.gene047991 | PPI |
| MS.gene047991 | MS.gene96633 | PPI |
| MS.gene047991 | MS.gene96631 | PPI |
| MS.gene029398 | MS.gene047991 | PPI |
| MS.gene047991 | MS.gene65704 | PPI |
| MS.gene047991 | MS.gene065127 | PPI |
| MS.gene065126 | MS.gene047991 | PPI |
| MS.gene047991 | MS.gene71839 | PPI |
| MS.gene047991 | MS.gene99600 | PPI |
| MS.gene047991 | MS.gene76298 | PPI |
| MS.gene047991 | MS.gene76297 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047991.t1 | MTR_1g110980 | 46.520 | 862 | 412 | 12 | 11 | 839 | 78 | 923 | 0.0 | 798 |
| MS.gene047991.t1 | MTR_1g111000 | 46.347 | 876 | 409 | 14 | 11 | 839 | 75 | 936 | 0.0 | 782 |
| MS.gene047991.t1 | MTR_5g057990 | 45.698 | 860 | 426 | 11 | 11 | 839 | 76 | 925 | 0.0 | 780 |
| MS.gene047991.t1 | MTR_3g096870 | 32.081 | 639 | 358 | 18 | 128 | 730 | 217 | 815 | 7.59e-88 | 298 |
| MS.gene047991.t1 | MTR_5g026610 | 30.963 | 675 | 390 | 23 | 103 | 761 | 69 | 683 | 2.38e-85 | 291 |
| MS.gene047991.t1 | MTR_5g026610 | 30.735 | 680 | 395 | 23 | 103 | 766 | 132 | 751 | 3.53e-85 | 292 |
| MS.gene047991.t1 | MTR_5g026610 | 30.735 | 680 | 395 | 23 | 103 | 766 | 69 | 688 | 6.41e-85 | 292 |
| MS.gene047991.t1 | MTR_5g026610 | 30.735 | 680 | 395 | 23 | 103 | 766 | 132 | 751 | 7.76e-85 | 293 |
| MS.gene047991.t1 | MTR_5g026610 | 30.735 | 680 | 395 | 23 | 103 | 766 | 172 | 791 | 2.96e-84 | 291 |
| MS.gene047991.t1 | MTR_5g026610 | 32.252 | 493 | 273 | 16 | 283 | 761 | 2 | 447 | 9.57e-68 | 240 |
| MS.gene047991.t1 | MTR_6g014900 | 82.456 | 57 | 10 | 0 | 554 | 610 | 77 | 133 | 7.84e-25 | 101 |
| MS.gene047991.t1 | MTR_7g089780 | 26.573 | 286 | 172 | 11 | 434 | 687 | 578 | 857 | 2.44e-15 | 80.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene047991.t1 | AT5G11720 | 64.303 | 832 | 283 | 7 | 13 | 839 | 79 | 901 | 0.0 | 1105 |
| MS.gene047991.t1 | AT1G68560 | 47.436 | 858 | 405 | 11 | 11 | 839 | 72 | 912 | 0.0 | 808 |
| MS.gene047991.t1 | AT3G45940 | 47.066 | 835 | 384 | 11 | 13 | 839 | 68 | 852 | 0.0 | 775 |
| MS.gene047991.t1 | AT5G63840 | 31.871 | 684 | 387 | 18 | 128 | 776 | 226 | 865 | 4.65e-96 | 321 |
| MS.gene047991.t1 | AT5G63840 | 31.871 | 684 | 387 | 18 | 128 | 776 | 253 | 892 | 7.97e-96 | 321 |
| MS.gene047991.t1 | AT3G23640 | 31.763 | 658 | 362 | 20 | 123 | 758 | 83 | 675 | 8.95e-90 | 305 |
| MS.gene047991.t1 | AT3G23640 | 31.763 | 658 | 362 | 20 | 123 | 758 | 83 | 675 | 8.95e-90 | 305 |
| MS.gene047991.t1 | AT3G23640 | 31.763 | 658 | 362 | 20 | 123 | 758 | 152 | 744 | 1.86e-89 | 306 |
Find 169 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGAAACATTTCTAGTCTTTA+AGG | 0.082654 | 2.4:+58442547 | MS.gene047991:CDS |
| CCTAATTATGGTAGGTTAAA+TGG | 0.142786 | 2.4:+58486223 | MS.gene047991:CDS |
| GTGAAGAAATCAAATTATTT+AGG | 0.156403 | 2.4:+58444789 | MS.gene047991:CDS |
| ACCCTCATAGCCAAGAATTT+TGG | 0.166971 | 2.4:+58444765 | MS.gene047991:CDS |
| TAAGGCCTTGTTGGTTGTTT+TGG | 0.171983 | 2.4:-58445032 | None:intergenic |
| CAAACCAAACTTTCACTCTT+TGG | 0.184938 | 2.4:+58442663 | MS.gene047991:CDS |
| TTAAAGACTAGAAATGTTTC+AGG | 0.191590 | 2.4:-58442545 | None:intergenic |
| ATATTGAACTTTGGCATCTT+TGG | 0.199134 | 2.4:+58445184 | MS.gene047991:CDS |
| TTCATCTCCTGAATTGGTTT+TGG | 0.204644 | 2.4:+58442904 | MS.gene047991:CDS |
| CTCCACAACACAACTCAATT+TGG | 0.207903 | 2.4:+58442455 | MS.gene047991:CDS |
| CCATTTAACCTACCATAATT+AGG | 0.210385 | 2.4:-58486223 | None:intergenic |
| CCTATGCCTTATTGGTCTTT+TGG | 0.217026 | 2.4:+58442959 | MS.gene047991:CDS |
| CATACTTTCCCAAAGGAAAT+TGG | 0.219398 | 2.4:+58485816 | MS.gene047991:CDS |
| CCAGCAACTTCTTTACATTA+TGG | 0.232431 | 2.4:+58444962 | MS.gene047991:CDS |
| TCAAATTTAAAACAGCTTAT+AGG | 0.237471 | 2.4:+58486358 | MS.gene047991:CDS |
| GGCCTGCCCCTATGCCTTAT+TGG | 0.240561 | 2.4:+58442951 | MS.gene047991:CDS |
| AGAGCTTCTCTGTATGGTTT+TGG | 0.249948 | 2.4:+58442608 | MS.gene047991:CDS |
| GGCACCGTTCTATTGTTAAT+TGG | 0.258038 | 2.4:-58444941 | None:intergenic |
| AATGTTGATGTGAATCTTTA+TGG | 0.264352 | 2.4:+58442707 | MS.gene047991:CDS |
| TAGTTATGGACAAGTGTATT+TGG | 0.270326 | 2.4:+58486033 | MS.gene047991:CDS |
| TTTCTCACATCCAAATAAAA+TGG | 0.270492 | 2.4:-58442737 | None:intergenic |
| ATCTCTTGCAAAGGGGTAAA+AGG | 0.281980 | 2.4:-58485522 | None:intergenic |
| TTTCTTCACCCCAAAATTCT+TGG | 0.283230 | 2.4:-58444775 | None:intergenic |
| CAAGAATGTAAATGATGTTC+AGG | 0.289246 | 2.4:+58443848 | MS.gene047991:CDS |
| TGTTGGCGAAGGTAACATTT+TGG | 0.289442 | 2.4:+58485928 | MS.gene047991:CDS |
| TGCTGGTTCATCTCCTGAAT+TGG | 0.290484 | 2.4:+58442898 | MS.gene047991:CDS |
| CATTCCAAAGAGTGAAAGTT+TGG | 0.290677 | 2.4:-58442667 | None:intergenic |
| AGAAATGTTTCAGGGTTTAA+AGG | 0.291288 | 2.4:-58442536 | None:intergenic |
| TACATTAGTGTGTAGAAATA+TGG | 0.304092 | 2.4:-58485641 | None:intergenic |
| TTATCTTTCGGAAAATTAAC+AGG | 0.306155 | 2.4:-58443966 | None:intergenic |
| TCAGGGTTTAAAGGGTCTTC+TGG | 0.316372 | 2.4:-58442527 | None:intergenic |
| GTTACTTCTAATGTTACTAA+TGG | 0.318927 | 2.4:+58486145 | MS.gene047991:CDS |
| CGGTGATCGTCTTACTTATA+AGG | 0.324376 | 2.4:+58442844 | MS.gene047991:CDS |
| GTTAAAGAGTATATCTTTGT+TGG | 0.331859 | 2.4:-58442498 | None:intergenic |
| CGCGGTGTTCCGAGCTGCTT+CGG | 0.332713 | 2.4:-58485975 | None:intergenic |
| GAGATCAAACCAATTTCCTT+TGG | 0.336443 | 2.4:-58485825 | None:intergenic |
| TGAAGAAATCAAATTATTTA+GGG | 0.336493 | 2.4:+58444790 | MS.gene047991:CDS |
| TACTGATCCAAAACCAATTC+AGG | 0.336794 | 2.4:-58442911 | None:intergenic |
| ACTCTTTGGAATGAAGATAT+TGG | 0.343085 | 2.4:+58442677 | MS.gene047991:CDS |
| AAATTTCTCATCTTATCTTT+CGG | 0.348401 | 2.4:-58443978 | None:intergenic |
| GAACACCGCGTTCGAACTAT+TGG | 0.349419 | 2.4:+58485988 | MS.gene047991:CDS |
| ATAGAAAAGGTCACATTCTT+GGG | 0.349460 | 2.4:+58486196 | MS.gene047991:CDS |
| CATAGAAAAGGTCACATTCT+TGG | 0.351516 | 2.4:+58486195 | MS.gene047991:CDS |
| CAGGCAAGAGCTTTACCTTT+GGG | 0.354744 | 2.4:+58485565 | MS.gene047991:CDS |
| TGTCATTGCTTCACCTTGTA+AGG | 0.358805 | 2.4:-58485951 | None:intergenic |
| TTCTTGGGGATACCTAATTA+TGG | 0.360897 | 2.4:+58486211 | MS.gene047991:CDS |
| AGTGGAAATGGAAATAGTTA+TGG | 0.365462 | 2.4:+58486019 | MS.gene047991:CDS |
| TTGAACTGAAGACTAAAATA+AGG | 0.365980 | 2.4:+58486389 | MS.gene047991:CDS |
| CCCCAAAATTCTTGGCTATG+AGG | 0.366805 | 2.4:-58444767 | None:intergenic |
| TCAATTATCTAGGAGAAGTT+TGG | 0.368283 | 2.4:+58444711 | MS.gene047991:CDS |
| ATAAACTCACAGTTTCTATT+AGG | 0.376587 | 2.4:+58485740 | MS.gene047991:CDS |
| TAGTGGAAATAACTGGTAAA+AGG | 0.379991 | 2.4:+58445053 | MS.gene047991:CDS |
| GATCAGTATACTCAGTTCAT+TGG | 0.382985 | 2.4:+58442926 | MS.gene047991:CDS |
| TACTAATGGAAAATTTGCTT+TGG | 0.383338 | 2.4:+58486159 | MS.gene047991:CDS |
| ACATATGCAACCTATGTTAG+AGG | 0.383951 | 2.4:+58444653 | MS.gene047991:CDS |
| GAAATGTTTCAGGGTTTAAA+GGG | 0.385560 | 2.4:-58442535 | None:intergenic |
| AGATCAAACCAATTTCCTTT+GGG | 0.386268 | 2.4:-58485824 | None:intergenic |
| ATGCCAAAGTTCAATATTGA+TGG | 0.387478 | 2.4:-58445178 | None:intergenic |
| TATGATTCTCACAATTTGTA+TGG | 0.393637 | 2.4:+58444998 | MS.gene047991:CDS |
| TCTTACTCTTAATTGATCCT+TGG | 0.395280 | 2.4:-58442279 | None:intergenic |
| TATTTCCACTAAGGCCTTGT+TGG | 0.398751 | 2.4:-58445041 | None:intergenic |
| AAGAAAAGTGGCCGCGCAAT+TGG | 0.399941 | 2.4:-58485686 | None:intergenic |
| GTGAAGATAAGGTCTGAGTT+TGG | 0.402724 | 2.4:-58442431 | None:intergenic |
| AATTCAGTGAGTGCCGAATC+AGG | 0.403598 | 2.4:+58485860 | MS.gene047991:CDS |
| CAAAGAGTGAAAGTTTGGTT+TGG | 0.408351 | 2.4:-58442662 | None:intergenic |
| CGTCTTACTTATAAGGTGAT+TGG | 0.409781 | 2.4:+58442851 | MS.gene047991:CDS |
| AACAACCAACAAGGCCTTAG+TGG | 0.410719 | 2.4:+58445036 | MS.gene047991:CDS |
| AGAAAATCAGGATAGTAAAC+TGG | 0.414597 | 2.4:-58444740 | None:intergenic |
| TTTGACATATTTGCCTGATT+CGG | 0.419183 | 2.4:-58485873 | None:intergenic |
| GCAGATATATGTGGCTTCTC+AGG | 0.425079 | 2.4:+58445223 | MS.gene047991:CDS |
| CTATGAGGGTTAAGAAAATC+AGG | 0.425136 | 2.4:-58444752 | None:intergenic |
| TCAGGCAAGAGCTTTACCTT+TGG | 0.428705 | 2.4:+58485564 | MS.gene047991:CDS |
| AGAAATGGAGTCAATTATCT+AGG | 0.429915 | 2.4:+58444701 | MS.gene047991:CDS |
| GATGTCTATATAAAGAGAAA+TGG | 0.431031 | 2.4:+58444686 | MS.gene047991:CDS |
| TTCGGCACTCACTGAATTTG+AGG | 0.433112 | 2.4:-58485855 | None:intergenic |
| TCAGAAATATGTGCTTATCT+TGG | 0.433264 | 2.4:+58444025 | MS.gene047991:CDS |
| AAGGCCTTAGTGGAAATAAC+TGG | 0.445009 | 2.4:+58445046 | MS.gene047991:CDS |
| GTCTCACCTGTGCTACAATC+TGG | 0.446789 | 2.4:+58485776 | MS.gene047991:CDS |
| ATCCCATCAATATTGAACTT+TGG | 0.446973 | 2.4:+58445175 | MS.gene047991:CDS |
| TCTGAATGATCTCTTGCAAA+GGG | 0.451001 | 2.4:-58485530 | None:intergenic |
| CTGATTCAAATAATCAAAGA+TGG | 0.455941 | 2.4:+58442306 | MS.gene047991:CDS |
| ATGTACGAATCAAACACAAA+AGG | 0.457037 | 2.4:+58485659 | MS.gene047991:CDS |
| TCAAGCCAAATACCATCAAA+AGG | 0.461330 | 2.4:-58444821 | None:intergenic |
| CTGAAGAACTTTGTCAGCGT+TGG | 0.470052 | 2.4:+58445254 | MS.gene047991:CDS |
| ATCTTTGGAATTCCAATGGT+TGG | 0.471395 | 2.4:+58445199 | MS.gene047991:CDS |
| TTTACCAGTTATTTCCACTA+AGG | 0.473476 | 2.4:-58445050 | None:intergenic |
| CCCAAAATTCTTGGCTATGA+GGG | 0.474032 | 2.4:-58444766 | None:intergenic |
| CAAAAGACCAATAAGGCATA+GGG | 0.479856 | 2.4:-58442958 | None:intergenic |
| ACTTTGTCAGCGTTGGATCC+AGG | 0.481184 | 2.4:+58445261 | MS.gene047991:CDS |
| TGTACGAATCAAACACAAAA+GGG | 0.487657 | 2.4:+58485660 | MS.gene047991:CDS |
| TAAAGACTAGAAATGTTTCA+GGG | 0.489335 | 2.4:-58442544 | None:intergenic |
| CCATAATGTAAAGAAGTTGC+TGG | 0.489736 | 2.4:-58444962 | None:intergenic |
| GACTTACCAAAAGACCAATA+AGG | 0.490076 | 2.4:-58442965 | None:intergenic |
| CATATATCTGCTCCAACCAT+TGG | 0.492448 | 2.4:-58445211 | None:intergenic |
| TATCTAGGAGAAGTTTGGCC+AGG | 0.494828 | 2.4:+58444716 | MS.gene047991:CDS |
| TCGGCACTCACTGAATTTGA+GGG | 0.495031 | 2.4:-58485854 | None:intergenic |
| TCGTATGTCGTGATATCCTC+GGG | 0.500032 | 2.4:-58485716 | None:intergenic |
| CTGGCAAGTATACAGCTCAT+TGG | 0.501264 | 2.4:+58445110 | MS.gene047991:CDS |
| GCTTCTTAATAGTAATGGAA+TGG | 0.506681 | 2.4:+58442808 | MS.gene047991:CDS |
| GTTGATCTACTCAAAATGAA+TGG | 0.508385 | 2.4:-58445076 | None:intergenic |
| GGTGAGGCTCTTGATCTAGT+AGG | 0.508850 | 2.4:+58486061 | MS.gene047991:CDS |
| TCAGGATAGTAAACTGGTCC+TGG | 0.510223 | 2.4:-58444734 | None:intergenic |
| CTTACTTATAAGGTGATTGG+TGG | 0.516125 | 2.4:+58442854 | MS.gene047991:CDS |
| GACCAATAAGGCATAGGGGC+AGG | 0.516640 | 2.4:-58442953 | None:intergenic |
| CCGTACAAAATTAACAGTAC+TGG | 0.519100 | 2.4:+58444908 | MS.gene047991:CDS |
| GTGAGAAAGGGTTCACCTGA+TGG | 0.519109 | 2.4:+58442752 | MS.gene047991:CDS |
| TCTCTTAGAATCACTTCTTG+TGG | 0.526616 | 2.4:-58442335 | None:intergenic |
| TTCGTATGTCGTGATATCCT+CGG | 0.526702 | 2.4:-58485717 | None:intergenic |
| AAGGTAAAGCTCTTGCCTGA+TGG | 0.527100 | 2.4:-58485561 | None:intergenic |
| TGCCAAAGTTCAATATTGAT+GGG | 0.533863 | 2.4:-58445177 | None:intergenic |
| GTGTGTAGAAATATGGAAGA+AGG | 0.535911 | 2.4:-58485634 | None:intergenic |
| TGGCATCTTTGGAATTCCAA+TGG | 0.536303 | 2.4:+58445195 | MS.gene047991:CDS |
| GGACAAGTGTATTTGGATGA+TGG | 0.537371 | 2.4:+58486040 | MS.gene047991:CDS |
| CCAAAAGACCAATAAGGCAT+AGG | 0.537624 | 2.4:-58442959 | None:intergenic |
| ATCTGAATGATCTCTTGCAA+AGG | 0.539186 | 2.4:-58485531 | None:intergenic |
| GTATACCCCTCGAAGTTATG+TGG | 0.541014 | 2.4:+58443898 | MS.gene047991:CDS |
| TATGTGCTTATCTTGGATCC+AGG | 0.542404 | 2.4:+58444032 | MS.gene047991:CDS |
| CAGGAGATAATGCTGCTACA+TGG | 0.545216 | 2.4:+58445134 | MS.gene047991:CDS |
| AAGAATGTAAATGATGTTCA+GGG | 0.546168 | 2.4:+58443849 | MS.gene047991:CDS |
| AAGTATACAGCTCATTGGAC+AGG | 0.547239 | 2.4:+58445115 | MS.gene047991:CDS |
| ATCTGTCCACATAACTTCGA+GGG | 0.548502 | 2.4:-58443904 | None:intergenic |
| TGTTGTGGAGTGTGAAGATA+AGG | 0.549530 | 2.4:-58442442 | None:intergenic |
| TATCTGTCCACATAACTTCG+AGG | 0.550869 | 2.4:-58443905 | None:intergenic |
| GTAACCAACTATGCAAAAGC+TGG | 0.551719 | 2.4:+58443876 | MS.gene047991:CDS |
| TGGGGATACCTAATTATGGT+AGG | 0.555154 | 2.4:+58486215 | MS.gene047991:CDS |
| GTCTTCTAAGTTTGTTACTG+TGG | 0.557046 | 2.4:+58486330 | MS.gene047991:CDS |
| GTGGACAGATATTGATTACA+TGG | 0.557543 | 2.4:+58443917 | MS.gene047991:CDS |
| TAGTAGGAGAGAAAGATCAA+TGG | 0.558780 | 2.4:+58486077 | MS.gene047991:CDS |
| AGTATACTCAGTTCATTGGT+AGG | 0.561924 | 2.4:+58442930 | MS.gene047991:CDS |
| AGCTTGTAAGCCTCTAACAT+AGG | 0.569461 | 2.4:-58444663 | None:intergenic |
| CAAGCCAAATACCATCAAAA+GGG | 0.571894 | 2.4:-58444820 | None:intergenic |
| TGATTCAAATAATCAAAGAT+GGG | 0.572293 | 2.4:+58442307 | MS.gene047991:CDS |
| TGGAAGAAGGCGGTAACGAA+GGG | 0.574037 | 2.4:-58485621 | None:intergenic |
| ACTGCACCAGATTGTAGCAC+AGG | 0.578361 | 2.4:-58485782 | None:intergenic |
| TCACAGTTTCTATTAGGCAA+AGG | 0.581170 | 2.4:+58485746 | MS.gene047991:CDS |
| ATAAATGTGCATGTTGGCGA+AGG | 0.585403 | 2.4:+58485917 | MS.gene047991:CDS |
| AACCAAATTGAGTTGTGTTG+TGG | 0.586329 | 2.4:-58442457 | None:intergenic |
| ATGGAAGAAGGCGGTAACGA+AGG | 0.592743 | 2.4:-58485622 | None:intergenic |
| AACATGTACCGAGTAGCATG+TGG | 0.595292 | 2.4:-58441013 | None:intergenic |
| CTGATGGAAGAGTGAAAAGT+GGG | 0.608003 | 2.4:+58442768 | MS.gene047991:CDS |
| CAATGACAACCGAAGCAGCT+CGG | 0.609707 | 2.4:+58485966 | MS.gene047991:CDS |
| TCGGGGAATGAAAAGAAAAG+TGG | 0.613496 | 2.4:-58485698 | None:intergenic |
| AGGACCGCCCACATGCTACT+CGG | 0.618923 | 2.4:+58441005 | MS.gene047991:CDS |
| GTTGATGCATACTTTCCCAA+AGG | 0.621790 | 2.4:+58485809 | MS.gene047991:CDS |
| AAGAAGCAAAACACCATGTG+TGG | 0.623596 | 2.4:-58442792 | None:intergenic |
| ATGGTTGGAGCAGATATATG+TGG | 0.625492 | 2.4:+58445214 | MS.gene047991:CDS |
| CCTGATGGAAGAGTGAAAAG+TGG | 0.627198 | 2.4:+58442767 | MS.gene047991:CDS |
| GTGAAAAGTGGGACCACACA+TGG | 0.628136 | 2.4:+58442779 | MS.gene047991:CDS |
| TGCACATTTATGTGATCAGA+TGG | 0.629493 | 2.4:-58485905 | None:intergenic |
| GGAATGGATGTTGTTTATAG+CGG | 0.631537 | 2.4:+58442824 | MS.gene047991:CDS |
| TAGAAAAGGTCACATTCTTG+GGG | 0.641323 | 2.4:+58486197 | MS.gene047991:CDS |
| ACGACCAATTAACAATAGAA+CGG | 0.646565 | 2.4:+58444937 | MS.gene047991:CDS |
| TGTAGAAATATGGAAGAAGG+CGG | 0.651249 | 2.4:-58485631 | None:intergenic |
| ATGCTGCAACTGAATCCCAA+AGG | 0.664437 | 2.4:-58485580 | None:intergenic |
| AGTGAGTTAAATGTTGTGAG+TGG | 0.666595 | 2.4:+58486262 | MS.gene047991:CDS |
| GATCACATAAATGTGCATGT+TGG | 0.667069 | 2.4:+58485911 | MS.gene047991:CDS |
| AGTGTATTTGGATGATGGTG+AGG | 0.668134 | 2.4:+58486045 | MS.gene047991:CDS |
| TCTGTCCACATAACTTCGAG+GGG | 0.671729 | 2.4:-58443903 | None:intergenic |
| CTGAATGATCTCTTGCAAAG+GGG | 0.678141 | 2.4:-58485529 | None:intergenic |
| GGGCTGTCAAGATTAGAATG+TGG | 0.681880 | 2.4:-58444884 | None:intergenic |
| CAAAAGGGACACCAATTGCG+CGG | 0.682204 | 2.4:+58485675 | MS.gene047991:CDS |
| AAAAGACCAATAAGGCATAG+GGG | 0.693626 | 2.4:-58442957 | None:intergenic |
| AGAATCCAAAACAACCAACA+AGG | 0.695173 | 2.4:+58445027 | MS.gene047991:CDS |
| ACATGTACCGAGTAGCATGT+GGG | 0.701979 | 2.4:-58441012 | None:intergenic |
| TCTTGATATGAGTTATACAG+AGG | 0.703820 | 2.4:+58440985 | None:intergenic |
| TGAGTGGAATGAATTCAATG+AGG | 0.735898 | 2.4:+58486278 | MS.gene047991:CDS |
| AACAACCAATAGTTCGAACG+CGG | 0.740711 | 2.4:-58485993 | None:intergenic |
| TGTACCGAGTAGCATGTGGG+CGG | 0.752501 | 2.4:-58441009 | None:intergenic |
| CGTATGTCGTGATATCCTCG+GGG | 0.754542 | 2.4:-58485715 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.4 | gene | 58440992 | 58486414 | 58440992 | ID=MS.gene047991 |
| chr2.4 | mRNA | 58440992 | 58486414 | 58440992 | ID=MS.gene047991.t1;Parent=MS.gene047991 |
| chr2.4 | exon | 58440992 | 58441026 | 58440992 | ID=MS.gene047991.t1.exon1;Parent=MS.gene047991.t1 |
| chr2.4 | CDS | 58440992 | 58441026 | 58440992 | ID=cds.MS.gene047991.t1;Parent=MS.gene047991.t1 |
| chr2.4 | exon | 58442271 | 58442980 | 58442271 | ID=MS.gene047991.t1.exon2;Parent=MS.gene047991.t1 |
| chr2.4 | CDS | 58442271 | 58442980 | 58442271 | ID=cds.MS.gene047991.t1;Parent=MS.gene047991.t1 |
| chr2.4 | exon | 58443823 | 58444053 | 58443823 | ID=MS.gene047991.t1.exon3;Parent=MS.gene047991.t1 |
| chr2.4 | CDS | 58443823 | 58444053 | 58443823 | ID=cds.MS.gene047991.t1;Parent=MS.gene047991.t1 |
| chr2.4 | exon | 58444636 | 58445282 | 58444636 | ID=MS.gene047991.t1.exon4;Parent=MS.gene047991.t1 |
| chr2.4 | CDS | 58444636 | 58445282 | 58444636 | ID=cds.MS.gene047991.t1;Parent=MS.gene047991.t1 |
| chr2.4 | exon | 58485515 | 58486414 | 58485515 | ID=MS.gene047991.t1.exon5;Parent=MS.gene047991.t1 |
| chr2.4 | CDS | 58485515 | 58486414 | 58485515 | ID=cds.MS.gene047991.t1;Parent=MS.gene047991.t1 |
| Gene Sequence |
| Protein sequence |
