AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene029755


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene029755.t1 MTR_1g062940 91.781 219 17 1 1 219 1 218 4.19e-148 411
MS.gene029755.t1 MTR_2g096380 60.169 118 47 0 1 118 1 118 1.45e-49 162
MS.gene029755.t1 MTR_4g063100 64.078 103 37 0 7 109 8 110 1.17e-45 152
MS.gene029755.t1 MTR_7g035075 60.000 110 44 0 2 111 10 119 6.18e-44 146
MS.gene029755.t1 MTR_0251s0050 62.385 109 41 0 6 114 13 121 2.38e-43 147
MS.gene029755.t1 MTR_6g006030 59.091 110 45 0 2 111 10 119 4.65e-43 144
MS.gene029755.t1 MTR_1g110460 61.321 106 41 0 6 111 26 131 4.74e-43 147
MS.gene029755.t1 MTR_1g073170 63.107 103 38 0 7 109 21 123 7.72e-43 145
MS.gene029755.t1 MTR_1g045610 59.459 111 45 0 1 111 16 126 1.80e-42 144
MS.gene029755.t1 MTR_0008s0390 61.905 105 40 0 6 110 13 117 1.13e-41 142
MS.gene029755.t1 MTR_0008s0470 41.053 190 95 2 6 178 13 202 2.07e-41 142
MS.gene029755.t1 MTR_2g097910 57.547 106 45 0 6 111 20 125 7.12e-41 142
MS.gene029755.t1 MTR_5g029840 60.000 105 42 0 6 110 12 116 8.22e-41 142
MS.gene029755.t1 MTR_7g115650 60.377 106 42 0 6 111 12 117 8.74e-41 138
MS.gene029755.t1 MTR_1g086510 60.377 106 42 0 6 111 21 126 1.32e-40 139
MS.gene029755.t1 MTR_8g095390 61.165 103 40 0 8 110 14 116 1.63e-40 140
MS.gene029755.t1 MTR_1g085040 46.386 166 72 4 4 154 10 173 2.01e-40 142
MS.gene029755.t1 MTR_8g031360 59.434 106 42 1 6 110 13 118 2.38e-40 140
MS.gene029755.t1 MTR_2g089450 60.000 105 42 0 6 110 12 116 3.18e-40 138
MS.gene029755.t1 MTR_3g097450 59.813 107 43 0 4 110 10 116 3.28e-40 139
MS.gene029755.t1 MTR_1g112760 54.545 110 50 0 4 113 11 120 4.11e-40 137
MS.gene029755.t1 MTR_0008s0280 51.938 129 61 1 7 135 13 140 4.41e-40 137
MS.gene029755.t1 MTR_2g011660 60.000 105 42 0 6 110 13 117 4.42e-40 140
MS.gene029755.t1 MTR_3g077110 55.455 110 49 0 4 113 10 119 4.71e-40 140
MS.gene029755.t1 MTR_4g073420 62.136 103 39 0 8 110 14 116 4.88e-40 139
MS.gene029755.t1 MTR_1g085640 54.478 134 53 2 6 133 12 143 5.25e-40 141
MS.gene029755.t1 MTR_1g100653 57.143 112 47 1 6 117 12 122 5.75e-40 139
MS.gene029755.t1 MTR_1g086530 55.660 106 47 0 6 111 33 138 5.92e-40 138
MS.gene029755.t1 MTR_4g091490 60.000 105 42 0 6 110 13 117 9.32e-40 140
MS.gene029755.t1 MTR_2g089620 60.952 105 41 0 6 110 12 116 1.02e-39 139
MS.gene029755.t1 MTR_4g100720 48.905 137 69 1 4 139 11 147 1.34e-39 134
MS.gene029755.t1 MTR_7g076740 48.276 145 73 2 6 148 12 156 1.38e-39 138
MS.gene029755.t1 MTR_4g102380 57.143 105 45 0 6 110 12 116 1.46e-39 137
MS.gene029755.t1 MTR_3g074520 58.095 105 44 0 6 110 12 116 1.56e-39 139
MS.gene029755.t1 MTR_4g065017 56.604 106 46 0 6 111 17 122 1.79e-39 138
MS.gene029755.t1 MTR_3g028740 57.547 106 45 0 6 111 22 127 1.97e-39 139
MS.gene029755.t1 MTR_3g052430 51.064 141 63 2 5 145 40 174 2.88e-39 142
MS.gene029755.t1 MTR_2g089420 59.048 105 43 0 6 110 11 115 3.00e-39 140
MS.gene029755.t1 MTR_4g125520 48.993 149 73 2 4 149 10 158 3.01e-39 137
MS.gene029755.t1 MTR_1g043080 41.420 169 88 2 6 163 12 180 3.76e-39 135
MS.gene029755.t1 MTR_5g079670 55.140 107 48 0 4 110 9 115 4.04e-39 134
MS.gene029755.t1 MTR_7g011170 59.048 105 43 0 6 110 12 116 4.39e-39 137
MS.gene029755.t1 MTR_4g105130 56.364 110 48 0 4 113 10 119 4.89e-39 138
MS.gene029755.t1 MTR_0063s0090 44.444 153 76 2 6 158 12 155 5.87e-39 134
MS.gene029755.t1 MTR_7g110830 53.125 128 52 2 4 125 10 135 6.58e-39 137
MS.gene029755.t1 MTR_4g485530 56.311 103 45 0 8 110 14 116 8.64e-39 132
MS.gene029755.t1 MTR_3g052450 54.331 127 52 2 5 131 39 159 9.57e-39 140
MS.gene029755.t1 MTR_7g096930 57.798 109 46 0 6 114 12 120 9.88e-39 135
MS.gene029755.t1 MTR_1g043050 57.143 105 45 0 6 110 12 116 1.83e-38 134
MS.gene029755.t1 MTR_2g064160 50.000 110 55 0 4 113 9 118 1.87e-38 135
MS.gene029755.t1 MTR_1g076150 57.143 105 45 0 6 110 12 116 3.11e-38 133
MS.gene029755.t1 MTR_3g065440 55.660 106 47 0 6 111 12 117 3.18e-38 134
MS.gene029755.t1 MTR_4g082230 57.143 105 45 0 6 110 12 116 3.75e-38 136
MS.gene029755.t1 MTR_5g078140 55.660 106 47 0 6 111 12 117 5.17e-38 134
MS.gene029755.t1 MTR_8g027345 58.182 110 46 0 6 115 12 121 5.89e-38 134
MS.gene029755.t1 MTR_4g478180 57.143 105 45 0 6 110 13 117 7.70e-38 134
MS.gene029755.t1 MTR_5g007370 48.507 134 62 2 6 139 12 138 8.63e-38 133
MS.gene029755.t1 MTR_2g067420 60.000 100 40 0 6 105 14 113 1.18e-37 134
MS.gene029755.t1 MTR_4g082290 56.190 105 46 0 6 110 12 116 1.39e-37 135
MS.gene029755.t1 MTR_2g099740 51.402 107 52 0 4 110 10 116 2.40e-37 134
MS.gene029755.t1 MTR_8g042410 48.529 136 67 1 2 137 33 165 2.42e-37 136
MS.gene029755.t1 MTR_1g100667 55.856 111 49 0 7 117 14 124 2.43e-37 131
MS.gene029755.t1 MTR_3g083540 58.095 105 44 0 6 110 41 145 2.49e-37 132
MS.gene029755.t1 MTR_8g017440 51.402 107 52 0 4 110 10 116 3.15e-37 132
MS.gene029755.t1 MTR_8g017540 52.336 107 51 0 4 110 56 162 3.23e-37 134
MS.gene029755.t1 MTR_3g461490 54.206 107 49 0 4 110 10 116 1.19e-36 131
MS.gene029755.t1 MTR_7g117730 54.464 112 51 0 6 117 12 123 2.10e-36 128
MS.gene029755.t1 MTR_2g033170 58.879 107 44 0 5 111 23 129 2.22e-36 130
MS.gene029755.t1 MTR_7g111290 59.794 97 39 0 6 102 12 108 2.27e-36 131
MS.gene029755.t1 MTR_8g006470 56.481 108 45 2 4 110 8 114 2.30e-36 129
MS.gene029755.t1 MTR_8g017500 50.926 108 53 0 4 111 10 117 2.60e-36 130
MS.gene029755.t1 MTR_8g020490 54.630 108 49 0 6 113 8 115 2.72e-36 128
MS.gene029755.t1 MTR_1g017000 52.778 108 50 1 4 110 10 117 4.02e-36 127
MS.gene029755.t1 MTR_6g012690 54.286 105 48 0 6 110 12 116 4.24e-36 130
MS.gene029755.t1 MTR_6g009430 52.830 106 50 0 5 110 11 116 4.35e-36 129
MS.gene029755.t1 MTR_6g055910 54.128 109 50 0 1 109 9 117 5.42e-36 128
MS.gene029755.t1 MTR_3g039990 51.327 113 54 1 6 117 13 125 1.09e-35 128
MS.gene029755.t1 MTR_7g010210 49.558 113 57 0 4 116 10 122 1.14e-35 127
MS.gene029755.t1 MTR_7g010210 49.558 113 57 0 4 116 10 122 1.33e-35 128
MS.gene029755.t1 MTR_8g017390 52.778 108 50 1 4 110 10 117 1.60e-35 130
MS.gene029755.t1 MTR_3g011610 51.818 110 53 0 3 112 34 143 1.79e-35 131
MS.gene029755.t1 MTR_8g017340 51.852 108 51 1 4 110 10 117 2.10e-35 130
MS.gene029755.t1 MTR_4g057635 53.153 111 51 1 5 114 11 121 3.01e-35 127
MS.gene029755.t1 MTR_1g021230 54.808 104 47 0 6 109 57 160 3.63e-35 129
MS.gene029755.t1 MTR_8g098860 50.000 108 54 0 4 111 10 117 6.12e-35 126
MS.gene029755.t1 MTR_2g096380 62.353 85 32 0 34 118 15 99 9.00e-35 123
MS.gene029755.t1 MTR_8g017350 50.926 108 52 1 4 110 10 117 1.07e-34 130
MS.gene029755.t1 MTR_2g095520 58.416 101 41 1 5 104 11 111 1.35e-34 125
MS.gene029755.t1 MTR_5g014990 52.632 114 53 1 5 117 11 124 1.61e-34 125
MS.gene029755.t1 MTR_4g123040 58.654 104 43 0 5 108 23 126 1.73e-34 125
MS.gene029755.t1 MTR_5g042030 54.286 105 48 0 6 110 7 111 2.03e-34 124
MS.gene029755.t1 MTR_1g017140 55.140 107 47 1 5 110 11 117 2.77e-34 125
MS.gene029755.t1 MTR_3g103570 46.309 149 69 4 5 142 11 159 3.23e-34 125
MS.gene029755.t1 MTR_4g121460 35.922 206 111 4 6 201 12 206 3.47e-34 125
MS.gene029755.t1 MTR_0140s0030 51.376 109 53 0 6 114 13 121 5.12e-34 124
MS.gene029755.t1 MTR_0489s0020 51.376 109 53 0 6 114 13 121 5.12e-34 124
MS.gene029755.t1 MTR_2g034790 54.286 105 48 0 6 110 12 116 7.75e-34 124
MS.gene029755.t1 MTR_7g087130 52.381 105 50 0 6 110 12 116 1.47e-33 123
MS.gene029755.t1 MTR_5g010020 53.465 101 47 0 4 104 10 110 1.73e-33 123
MS.gene029755.t1 MTR_7g102110 51.402 107 51 1 5 110 11 117 2.11e-33 121
MS.gene029755.t1 MTR_4g063100 68.493 73 23 0 37 109 9 81 8.15e-33 118
MS.gene029755.t1 MTR_4g097570 55.556 99 43 1 5 102 11 109 4.90e-32 118
MS.gene029755.t1 MTR_0197s0010 53.465 101 47 0 10 110 5 105 5.86e-32 116
MS.gene029755.t1 MTR_5g078910 50.943 106 52 0 5 110 6 111 5.90e-32 118
MS.gene029755.t1 MTR_4g029540 53.271 107 48 2 6 111 10 115 9.62e-32 117
MS.gene029755.t1 MTR_6g012180 50.980 102 50 0 4 105 10 111 1.02e-31 117
MS.gene029755.t1 MTR_4g097570 55.000 100 43 2 5 102 11 110 2.60e-31 116
MS.gene029755.t1 MTR_4g128670 55.446 101 44 1 5 104 11 111 2.98e-31 117
MS.gene029755.t1 MTR_5g079290 50.476 105 52 0 6 110 17 121 3.17e-31 115
MS.gene029755.t1 MTR_7g109320 58.095 105 44 0 6 110 12 116 4.77e-31 117
MS.gene029755.t1 MTR_5g088610 49.541 109 54 1 5 112 8 116 4.92e-31 117
MS.gene029755.t1 MTR_7g017260 46.400 125 64 2 6 127 25 149 7.52e-31 114
MS.gene029755.t1 MTR_0001s0360 51.429 105 51 0 6 110 7 111 1.21e-30 113
MS.gene029755.t1 MTR_5g062790 50.476 105 51 1 5 108 8 112 1.47e-30 114
MS.gene029755.t1 MTR_2g088170 50.000 118 56 1 6 123 29 143 1.84e-30 117
MS.gene029755.t1 MTR_8g060940 51.961 102 49 0 6 107 7 108 2.09e-30 112
MS.gene029755.t1 MTR_5g088080 49.524 105 52 1 5 108 11 115 2.40e-30 113
MS.gene029755.t1 MTR_5g088150 49.524 105 52 1 5 108 11 115 2.40e-30 113
MS.gene029755.t1 MTR_5g488210 49.524 105 52 1 5 108 11 115 2.40e-30 113
MS.gene029755.t1 MTR_6g090405 51.429 105 50 1 6 109 12 116 2.46e-30 112
MS.gene029755.t1 MTR_5g088640 50.485 103 50 1 7 108 13 115 2.51e-30 113
MS.gene029755.t1 MTR_5g079220 49.524 105 53 0 6 110 21 125 4.26e-30 112
MS.gene029755.t1 MTR_5g079120 49.524 105 53 0 6 110 61 165 4.34e-30 113
MS.gene029755.t1 MTR_5g078950 50.980 102 50 0 6 107 7 108 4.88e-30 112
MS.gene029755.t1 MTR_5g488170 50.485 103 50 1 7 108 13 115 5.49e-30 111
MS.gene029755.t1 MTR_5g078860 49.541 109 55 0 2 110 3 111 9.83e-30 112
MS.gene029755.t1 MTR_5g078800 50.476 105 52 0 6 110 7 111 2.12e-29 110
MS.gene029755.t1 MTR_4g019370 53.398 103 45 2 8 109 38 138 2.62e-29 112
MS.gene029755.t1 MTR_4g094982 51.456 103 49 1 8 110 5 106 1.51e-28 108
MS.gene029755.t1 MTR_5g078930 48.544 103 53 0 7 109 10 112 3.71e-28 106
MS.gene029755.t1 MTR_6g055910 61.842 76 29 0 34 109 13 88 6.23e-28 106
MS.gene029755.t1 MTR_1g083630 50.467 107 53 0 6 112 12 118 6.35e-28 110
MS.gene029755.t1 MTR_0247s0040 48.039 102 53 0 6 107 7 108 1.23e-27 103
MS.gene029755.t1 MTR_3g101290 40.625 128 63 3 8 124 37 162 2.46e-27 104
MS.gene029755.t1 MTR_0193s0090 45.714 105 57 0 6 110 7 111 1.39e-26 102
MS.gene029755.t1 MTR_5g016510 48.077 104 51 2 8 110 5 106 3.10e-26 103
MS.gene029755.t1 MTR_5g082910 48.000 100 49 2 8 106 19 116 4.06e-26 102
MS.gene029755.t1 MTR_5g049190 49.495 99 47 2 5 102 16 112 5.18e-26 101
MS.gene029755.t1 MTR_3g045430 43.810 105 59 0 6 110 13 117 1.10e-24 99.0
MS.gene029755.t1 MTR_5g070020 47.525 101 50 2 3 102 117 215 1.98e-24 99.4
MS.gene029755.t1 MTR_4g128190 45.872 109 42 3 6 110 11 106 3.08e-24 96.7
MS.gene029755.t1 MTR_7g037260 37.037 189 98 7 5 188 142 314 3.10e-24 98.6
MS.gene029755.t1 MTR_7g450950 42.000 100 57 1 5 104 154 252 4.58e-24 97.8
MS.gene029755.t1 MTR_7g061330 44.340 106 56 2 6 110 111 214 5.42e-24 99.8
MS.gene029755.t1 MTR_7g061330 37.143 105 64 2 8 111 61 164 1.45e-12 66.6
MS.gene029755.t1 MTR_7g461410 44.340 106 56 2 6 110 111 214 5.42e-24 99.8
MS.gene029755.t1 MTR_7g461410 37.143 105 64 2 8 111 61 164 1.45e-12 66.6
MS.gene029755.t1 MTR_7g111290 63.636 66 24 0 37 102 1 66 5.63e-24 97.8
MS.gene029755.t1 MTR_7g061330 35.404 161 91 4 6 155 75 233 5.93e-24 99.4
MS.gene029755.t1 MTR_7g061330 37.143 105 64 2 8 111 25 128 1.71e-12 66.2
MS.gene029755.t1 MTR_6g015455 47.115 104 52 2 8 110 5 106 7.64e-24 99.4
MS.gene029755.t1 MTR_3g463400 46.939 98 49 2 6 102 131 226 1.64e-23 97.8
MS.gene029755.t1 MTR_3g110028 36.364 121 74 2 6 125 83 201 2.19e-23 98.2
MS.gene029755.t1 MTR_3g110028 36.538 104 64 2 8 110 33 135 1.98e-12 66.2
MS.gene029755.t1 MTR_5g010650 48.039 102 52 1 1 102 103 203 2.99e-23 97.1
MS.gene029755.t1 MTR_1g026870 33.803 142 91 2 6 146 83 222 3.42e-23 97.4
MS.gene029755.t1 MTR_1g026870 35.577 104 65 2 8 110 33 135 5.90e-13 67.8
MS.gene029755.t1 MTR_6g074860 38.194 144 83 3 8 150 4 142 9.37e-23 92.8
MS.gene029755.t1 MTR_1g085880 48.571 105 52 2 6 108 11 115 3.56e-22 90.1
MS.gene029755.t1 MTR_4g105660 45.918 98 50 2 6 102 178 273 9.74e-22 92.4
MS.gene029755.t1 MTR_1g085770 48.571 105 52 2 6 108 11 115 1.46e-21 90.9
MS.gene029755.t1 MTR_5g041570 40.708 113 64 2 2 113 128 238 2.59e-21 91.7
MS.gene029755.t1 MTR_1g057980 43.000 100 56 1 5 104 77 175 2.69e-21 89.7
MS.gene029755.t1 MTR_3g077650 44.444 99 52 2 5 102 178 274 2.71e-21 91.7
MS.gene029755.t1 MTR_7g451170 45.263 95 51 1 8 102 191 284 2.88e-21 91.3
MS.gene029755.t1 MTR_4g088015 40.708 113 62 2 1 109 214 325 3.66e-21 90.9
MS.gene029755.t1 MTR_5g007300 51.948 77 37 0 6 82 64 140 3.80e-21 85.9
MS.gene029755.t1 MTR_4g082040 40.909 110 62 2 8 116 105 212 6.35e-21 90.1
MS.gene029755.t1 MTR_3g089045 44.037 109 58 2 8 115 16 122 7.05e-21 88.6
MS.gene029755.t1 MTR_6g027360 36.585 123 70 3 6 122 76 196 8.00e-21 88.6
MS.gene029755.t1 MTR_7g037130 35.676 185 106 6 5 188 142 314 9.74e-21 89.4
MS.gene029755.t1 MTR_6g027340 34.711 121 71 3 8 122 16 134 2.72e-20 85.1
MS.gene029755.t1 MTR_6g027370 40.777 103 58 2 8 109 99 199 3.83e-20 87.4
MS.gene029755.t1 MTR_2g096380 64.706 51 18 0 68 118 5 55 3.34e-19 81.6
MS.gene029755.t1 MTR_7g086960 36.364 154 81 5 8 149 89 237 6.56e-19 84.0
MS.gene029755.t1 MTR_7g035350 42.000 100 57 1 5 104 222 320 7.23e-19 84.7
MS.gene029755.t1 MTR_7g061550 36.296 135 71 3 11 143 10 131 9.24e-19 83.6
MS.gene029755.t1 MTR_4g063100 69.767 43 13 0 67 109 4 46 7.51e-17 75.9
MS.gene029755.t1 MTR_5g038910 34.752 141 83 4 10 146 28 163 9.56e-16 75.5
MS.gene029755.t1 MTR_5g038910 34.752 141 83 4 10 146 28 163 1.39e-15 75.1
MS.gene029755.t1 MTR_0023s0210 40.260 77 46 0 6 82 7 83 3.21e-14 65.9
MS.gene029755.t1 MTR_8g468380 37.000 100 62 1 10 109 24 122 5.19e-14 70.5
MS.gene029755.t1 MTR_6g055910 64.286 42 15 0 68 109 6 47 4.76e-12 63.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene029755.t1 AT3G53200 51.596 188 75 3 4 176 7 193 9.43e-57 180
MS.gene029755.t1 AT3G46130 63.063 111 41 0 1 111 4 114 2.04e-47 157
MS.gene029755.t1 AT5G59780 62.963 108 40 0 4 111 6 113 1.65e-46 154
MS.gene029755.t1 AT3G24310 61.111 108 42 0 4 111 16 123 1.61e-42 144
MS.gene029755.t1 AT3G30210 65.049 103 36 0 6 108 27 129 2.41e-42 144
MS.gene029755.t1 AT4G13480 60.360 111 44 0 1 111 1 111 3.48e-42 144
MS.gene029755.t1 AT3G27810 58.491 106 44 0 6 111 20 125 4.09e-42 142
MS.gene029755.t1 AT3G23250 44.086 186 98 3 6 190 12 192 6.34e-42 144
MS.gene029755.t1 AT5G40350 60.000 105 42 0 6 110 17 121 8.72e-42 141
MS.gene029755.t1 AT1G16490 60.952 105 41 0 6 110 14 118 1.41e-41 142
MS.gene029755.t1 AT1G48000 57.009 107 46 0 6 112 32 138 1.93e-41 141
MS.gene029755.t1 AT5G65230 59.048 105 43 0 6 110 12 116 2.81e-41 142
MS.gene029755.t1 AT4G38620 48.630 146 56 1 8 153 14 140 3.17e-41 142
MS.gene029755.t1 AT1G79180 53.077 130 60 1 6 135 14 142 3.32e-41 142
MS.gene029755.t1 AT2G47190 57.009 107 46 0 5 111 19 125 3.80e-41 141
MS.gene029755.t1 AT5G26660 58.333 108 45 0 4 111 10 117 4.83e-41 143
MS.gene029755.t1 AT3G12820 56.303 119 52 0 6 124 14 132 6.43e-41 139
MS.gene029755.t1 AT5G61420 58.559 111 46 0 3 113 9 119 6.66e-41 143
MS.gene029755.t1 AT1G68320 57.407 108 46 0 4 111 17 124 9.87e-41 140
MS.gene029755.t1 AT5G07700 58.333 108 45 0 3 110 9 116 1.06e-40 142
MS.gene029755.t1 AT5G07700 58.333 108 45 0 3 110 9 116 1.06e-40 142
MS.gene029755.t1 AT1G57560 44.872 156 85 1 4 159 10 164 1.22e-40 140
MS.gene029755.t1 AT2G16720 57.273 110 47 0 1 110 7 116 1.31e-40 140
MS.gene029755.t1 AT5G07690 53.906 128 57 1 3 130 9 134 1.48e-40 141
MS.gene029755.t1 AT3G01530 55.455 110 49 0 6 115 25 134 1.58e-40 137
MS.gene029755.t1 AT4G12350 45.395 152 73 2 6 154 12 156 1.68e-40 140
MS.gene029755.t1 AT1G18570 60.952 105 41 0 6 110 13 117 2.04e-40 141
MS.gene029755.t1 AT3G61250 57.143 105 45 0 6 110 12 116 2.07e-40 140
MS.gene029755.t1 AT4G22680 48.905 137 63 1 6 142 12 141 2.29e-40 139
MS.gene029755.t1 AT3G13540 59.259 108 44 0 6 113 23 130 3.18e-40 138
MS.gene029755.t1 AT4G34990 61.165 103 40 0 8 110 14 116 3.36e-40 139
MS.gene029755.t1 AT1G57560 57.944 107 45 0 4 110 10 116 3.40e-40 140
MS.gene029755.t1 AT1G25340 55.455 110 49 0 2 111 14 123 6.30e-40 138
MS.gene029755.t1 AT1G09540 58.333 108 45 0 4 111 10 117 9.18e-40 140
MS.gene029755.t1 AT4G05100 60.000 105 42 0 6 110 13 117 1.07e-39 139
MS.gene029755.t1 AT1G56160 59.048 105 43 0 6 110 14 118 1.39e-39 138
MS.gene029755.t1 AT5G10280 57.143 105 45 0 6 110 12 116 1.49e-39 139
MS.gene029755.t1 AT1G06180 56.364 110 48 0 6 115 12 121 2.24e-39 136
MS.gene029755.t1 AT1G22640 57.547 106 45 0 5 110 11 116 2.37e-39 136
MS.gene029755.t1 AT5G16770 60.000 105 42 0 6 110 12 116 2.49e-39 138
MS.gene029755.t1 AT5G16770 60.000 105 42 0 6 110 12 116 2.49e-39 138
MS.gene029755.t1 AT3G53200 49.020 153 62 3 39 176 9 160 2.51e-39 134
MS.gene029755.t1 AT5G14750 46.763 139 67 2 7 139 17 154 2.73e-39 134
MS.gene029755.t1 AT5G15310 35.455 220 112 5 6 201 12 225 2.93e-39 135
MS.gene029755.t1 AT4G09460 41.848 184 101 3 8 187 14 195 3.05e-39 135
MS.gene029755.t1 AT1G74080 57.407 108 46 0 1 108 7 114 3.09e-39 138
MS.gene029755.t1 AT5G16770 60.000 105 42 0 6 110 12 116 3.74e-39 137
MS.gene029755.t1 AT5G16770 60.000 105 42 0 6 110 12 116 3.74e-39 137
MS.gene029755.t1 AT4G28110 58.095 105 44 0 6 110 12 116 4.08e-39 136
MS.gene029755.t1 AT4G01680 55.455 110 49 0 4 113 10 119 5.28e-39 135
MS.gene029755.t1 AT5G54230 56.190 105 46 0 6 110 12 116 5.33e-39 137
MS.gene029755.t1 AT4G17785 56.881 109 47 0 2 110 9 117 6.61e-39 137
MS.gene029755.t1 AT4G21440 57.143 105 45 0 6 110 12 116 7.11e-39 137
MS.gene029755.t1 AT1G35515 57.547 106 45 0 5 110 11 116 7.61e-39 133
MS.gene029755.t1 AT2G31180 39.896 193 90 3 6 172 12 204 8.41e-39 134
MS.gene029755.t1 AT3G02940 58.095 105 44 0 6 110 12 116 8.44e-39 136
MS.gene029755.t1 AT4G17785 56.881 109 47 0 2 110 9 117 8.88e-39 137
MS.gene029755.t1 AT3G12720 51.852 108 52 0 6 113 22 129 1.30e-38 135
MS.gene029755.t1 AT3G02940 58.095 105 44 0 6 110 12 116 1.39e-38 136
MS.gene029755.t1 AT3G02940 58.095 105 44 0 6 110 12 116 1.39e-38 136
MS.gene029755.t1 AT4G01680 55.455 110 49 0 4 113 10 119 1.47e-38 136
MS.gene029755.t1 AT3G08500 58.491 106 44 0 6 111 30 135 1.74e-38 136
MS.gene029755.t1 AT5G15310 57.143 105 45 0 6 110 12 116 2.11e-38 135
MS.gene029755.t1 AT5G15310 57.143 105 45 0 6 110 12 116 2.12e-38 135
MS.gene029755.t1 AT1G34670 57.143 105 45 0 6 110 12 116 3.06e-38 136
MS.gene029755.t1 AT1G66230 39.773 176 104 1 6 181 12 185 6.36e-38 133
MS.gene029755.t1 AT3G01140 57.143 105 45 0 6 110 12 116 7.63e-38 134
MS.gene029755.t1 AT3G01140 57.143 105 45 0 6 110 55 159 1.88e-37 134
MS.gene029755.t1 AT2G32460 47.059 136 64 2 1 136 13 140 2.39e-37 136
MS.gene029755.t1 AT4G26930 53.719 121 53 1 3 123 16 133 2.41e-37 134
MS.gene029755.t1 AT4G25560 57.009 107 46 0 3 109 7 113 3.48e-37 131
MS.gene029755.t1 AT5G16600 55.660 106 47 0 6 111 12 117 3.85e-37 132
MS.gene029755.t1 AT5G60890 54.630 108 49 0 4 111 10 117 5.61e-37 131
MS.gene029755.t1 AT5G12870 52.727 110 52 0 2 111 14 123 6.41e-37 130
MS.gene029755.t1 AT2G32460 47.059 136 64 2 1 136 1 128 6.86e-37 134
MS.gene029755.t1 AT5G40330 43.662 142 77 1 7 148 13 151 7.75e-37 129
MS.gene029755.t1 AT5G56110 55.140 107 48 0 4 110 10 116 8.45e-37 131
MS.gene029755.t1 AT5G06100 52.066 121 55 1 3 123 29 146 1.39e-36 133
MS.gene029755.t1 AT5G35550 36.190 210 123 5 4 212 12 211 2.28e-36 128
MS.gene029755.t1 AT3G06490 57.944 107 45 0 5 111 18 124 2.29e-36 130
MS.gene029755.t1 AT3G27920 37.500 200 90 5 7 206 15 179 2.50e-36 127
MS.gene029755.t1 AT3G13890 50.467 107 53 0 4 110 10 116 2.62e-36 130
MS.gene029755.t1 AT5G06100 52.066 121 55 1 3 123 29 146 2.96e-36 133
MS.gene029755.t1 AT5G06100 52.066 121 55 1 3 123 29 146 2.96e-36 133
MS.gene029755.t1 AT5G06100 52.066 121 55 1 3 123 29 146 2.96e-36 133
MS.gene029755.t1 AT5G06100 52.066 121 55 1 3 123 29 146 2.96e-36 133
MS.gene029755.t1 AT5G49620 58.879 107 44 0 5 111 25 131 3.35e-36 129
MS.gene029755.t1 AT5G55020 57.547 106 45 0 3 108 23 128 3.41e-36 133
MS.gene029755.t1 AT5G52260 59.223 103 42 0 7 109 13 115 4.84e-36 128
MS.gene029755.t1 AT3G11440 52.542 118 53 1 6 123 41 155 5.69e-36 132
MS.gene029755.t1 AT3G48920 54.054 111 51 0 4 114 16 126 1.56e-35 126
MS.gene029755.t1 AT3G11440 52.542 118 53 1 6 123 41 155 1.74e-35 131
MS.gene029755.t1 AT3G11440 52.542 118 53 1 6 123 41 155 1.74e-35 131
MS.gene029755.t1 AT3G11440 52.542 118 53 1 6 123 41 155 1.74e-35 131
MS.gene029755.t1 AT1G25340 53.636 110 46 1 2 111 14 118 3.48e-35 126
MS.gene029755.t1 AT5G65790 53.043 115 53 1 5 118 11 125 3.72e-35 128
MS.gene029755.t1 AT4G01680 50.000 122 49 1 4 113 10 131 4.59e-35 127
MS.gene029755.t1 AT3G49690 53.043 115 53 1 5 118 11 125 7.01e-35 126
MS.gene029755.t1 AT3G28470 53.000 100 47 0 5 104 11 110 7.22e-35 126
MS.gene029755.t1 AT5G62320 53.571 112 45 1 6 110 13 124 7.46e-35 124
MS.gene029755.t1 AT3G47600 52.830 106 50 0 6 111 12 117 8.77e-35 126
MS.gene029755.t1 AT1G25340 53.636 110 46 1 2 111 14 118 8.86e-35 125
MS.gene029755.t1 AT5G62470 52.212 113 53 1 6 117 12 124 1.03e-34 126
MS.gene029755.t1 AT5G52600 53.846 104 48 0 6 109 12 115 1.49e-34 122
MS.gene029755.t1 AT1G74650 48.800 125 62 1 6 128 12 136 1.52e-34 125
MS.gene029755.t1 AT5G49330 56.190 105 46 0 6 110 12 116 1.61e-34 125
MS.gene029755.t1 AT4G37780 52.632 114 53 1 6 118 12 125 1.88e-34 124
MS.gene029755.t1 AT2G47460 54.717 106 48 0 6 111 12 117 2.20e-34 126
MS.gene029755.t1 AT1G63910 50.926 108 53 0 4 111 10 117 2.23e-34 126
MS.gene029755.t1 AT1G79180 46.377 138 41 1 6 110 14 151 2.65e-34 125
MS.gene029755.t1 AT1G08810 39.884 173 101 3 6 178 12 181 2.80e-34 124
MS.gene029755.t1 AT3G60460 54.630 108 47 2 4 110 9 115 3.90e-34 124
MS.gene029755.t1 AT5G23000 54.717 106 47 1 6 110 12 117 4.34e-34 124
MS.gene029755.t1 AT3G62610 53.774 106 49 0 6 111 12 117 4.79e-34 124
MS.gene029755.t1 AT5G57620 52.679 112 52 1 5 115 11 122 4.99e-34 124
MS.gene029755.t1 AT1G74430 51.402 107 52 0 4 110 10 116 9.52e-34 122
MS.gene029755.t1 AT3G13890 46.552 116 53 1 4 110 10 125 2.55e-33 123
MS.gene029755.t1 AT5G14340 52.830 106 50 0 6 111 24 129 3.32e-33 120
MS.gene029755.t1 AT3G28910 51.429 105 51 0 6 110 12 116 7.06e-33 121
MS.gene029755.t1 AT3G46130 66.667 75 25 0 37 111 8 82 1.15e-32 118
MS.gene029755.t1 AT5G49620 52.066 121 44 1 5 111 25 145 1.48e-32 120
MS.gene029755.t1 AT5G62470 52.212 113 52 2 6 117 12 123 1.60e-32 120
MS.gene029755.t1 AT2G26960 45.669 127 66 1 4 130 18 141 2.08e-32 122
MS.gene029755.t1 AT5G59780 68.493 73 23 0 39 111 20 92 2.11e-32 117
MS.gene029755.t1 AT3G46130 68.493 73 23 0 39 111 20 92 3.60e-32 117
MS.gene029755.t1 AT2G36890 52.336 107 50 1 5 110 11 117 9.05e-32 117
MS.gene029755.t1 AT2G36890 52.336 107 50 1 5 110 52 158 1.95e-31 117
MS.gene029755.t1 AT1G66370 45.113 133 72 1 6 137 8 140 6.96e-31 114
MS.gene029755.t1 AT1G18710 46.729 107 57 0 4 110 10 116 8.02e-31 114
MS.gene029755.t1 AT3G27810 63.014 73 27 0 39 111 4 76 1.34e-30 111
MS.gene029755.t1 AT1G66380 51.351 111 52 1 1 109 1 111 5.01e-30 108
MS.gene029755.t1 AT3G50060 51.923 104 47 2 8 110 6 107 6.49e-30 112
MS.gene029755.t1 AT5G14750 47.009 117 50 3 34 139 5 120 7.32e-30 109
MS.gene029755.t1 AT5G40350 63.889 72 26 0 39 110 5 76 1.17e-29 108
MS.gene029755.t1 AT3G12820 71.014 69 20 0 42 110 2 70 2.09e-29 108
MS.gene029755.t1 AT5G35550 36.111 180 104 5 34 212 45 214 4.06e-29 109
MS.gene029755.t1 AT2G26950 43.333 120 65 1 4 123 14 130 6.70e-29 111
MS.gene029755.t1 AT1G56650 50.450 111 53 1 1 109 1 111 7.69e-29 108
MS.gene029755.t1 AT2G39880 50.000 112 53 2 3 113 45 154 7.96e-29 111
MS.gene029755.t1 AT5G67300 50.000 104 49 2 8 110 6 107 1.45e-28 109
MS.gene029755.t1 AT1G66390 50.450 111 53 1 1 109 1 111 5.93e-28 106
MS.gene029755.t1 AT5G26660 63.014 73 27 0 39 111 14 86 6.18e-28 108
MS.gene029755.t1 AT3G47600 52.128 94 41 1 18 111 22 111 2.30e-27 106
MS.gene029755.t1 AT3G55730 39.412 170 91 6 8 175 56 215 3.02e-27 107
MS.gene029755.t1 AT5G02320 34.759 187 97 7 6 190 65 228 3.73e-26 105
MS.gene029755.t1 AT5G02320 34.759 187 97 7 6 190 125 288 4.01e-26 105
MS.gene029755.t1 AT5G02320 34.759 187 97 7 6 190 125 288 4.01e-26 105
MS.gene029755.t1 AT3G09230 50.485 103 48 2 8 109 55 155 1.02e-25 103
MS.gene029755.t1 AT2G23290 48.077 104 51 2 8 110 13 114 7.60e-25 99.8
MS.gene029755.t1 AT1G17950 34.940 166 96 4 8 172 5 159 9.26e-25 98.2
MS.gene029755.t1 AT4G37260 43.548 124 65 3 8 130 13 132 9.87e-25 99.4
MS.gene029755.t1 AT4G18770 48.454 97 49 1 6 102 215 310 2.01e-24 100
MS.gene029755.t1 AT5G58850 49.000 100 48 2 4 102 101 198 4.05e-24 99.4
MS.gene029755.t1 AT5G40360 29.469 207 123 3 6 212 156 339 4.69e-24 98.2
MS.gene029755.t1 AT5G11050 47.000 100 50 2 4 102 101 198 5.04e-23 96.3
MS.gene029755.t1 AT3G09370 42.453 106 58 2 5 109 127 230 1.74e-22 95.1
MS.gene029755.t1 AT3G09370 37.500 104 63 2 8 110 78 180 1.81e-12 66.2
MS.gene029755.t1 AT3G09370 42.453 106 58 2 5 109 132 235 1.87e-22 95.1
MS.gene029755.t1 AT3G09370 37.500 104 63 2 8 110 83 185 1.71e-12 66.2
MS.gene029755.t1 AT3G09370 42.453 106 58 2 5 109 140 243 2.34e-22 94.7
MS.gene029755.t1 AT3G09370 37.500 104 63 2 8 110 91 193 1.74e-12 66.2
MS.gene029755.t1 AT1G66380 55.844 77 34 0 33 109 2 78 5.62e-22 87.0
MS.gene029755.t1 AT3G23250 40.714 140 77 3 52 190 1 135 6.42e-22 90.1
MS.gene029755.t1 AT3G29020 37.398 123 75 2 8 130 65 185 8.64e-22 90.1
MS.gene029755.t1 AT1G73410 44.762 105 55 2 8 111 6 108 9.22e-22 90.1
MS.gene029755.t1 AT5G11510 38.679 106 62 2 6 110 79 182 9.79e-22 93.6
MS.gene029755.t1 AT5G11510 36.538 104 64 2 8 110 29 131 1.14e-12 67.0
MS.gene029755.t1 AT5G11510 38.679 106 62 2 6 110 79 182 9.79e-22 93.6
MS.gene029755.t1 AT5G11510 36.538 104 64 2 8 110 29 131 1.14e-12 67.0
MS.gene029755.t1 AT5G11510 38.679 106 62 2 6 110 79 182 9.79e-22 93.6
MS.gene029755.t1 AT5G11510 36.538 104 64 2 8 110 29 131 1.14e-12 67.0
MS.gene029755.t1 AT5G11510 38.095 105 64 1 6 110 79 182 1.14e-21 93.2
MS.gene029755.t1 AT5G11510 36.538 104 64 2 8 110 29 131 1.13e-12 67.0
MS.gene029755.t1 AT5G11510 38.095 105 64 1 6 110 79 182 1.18e-21 93.2
MS.gene029755.t1 AT5G11510 36.538 104 64 2 8 110 29 131 1.18e-12 67.0
MS.gene029755.t1 AT1G73410 44.762 105 55 2 8 111 6 108 1.20e-21 89.0
MS.gene029755.t1 AT3G29020 37.097 124 76 2 8 131 67 188 1.29e-21 90.9
MS.gene029755.t1 AT3G27785 42.857 98 55 1 5 102 186 282 2.13e-21 91.7
MS.gene029755.t1 AT1G69560 40.909 110 62 2 5 113 104 211 2.76e-21 90.5
MS.gene029755.t1 AT1G69560 40.909 110 62 2 5 113 120 227 3.62e-21 90.1
MS.gene029755.t1 AT4G33450 41.509 106 59 2 5 109 16 119 8.04e-21 87.8
MS.gene029755.t1 AT5G14750 48.052 77 34 1 52 122 1 77 8.54e-21 85.1
MS.gene029755.t1 AT5G14750 48.052 77 34 1 52 122 1 77 8.54e-21 85.1
MS.gene029755.t1 AT1G26780 42.857 105 57 2 6 109 96 198 1.30e-20 89.0
MS.gene029755.t1 AT5G17800 40.187 107 63 1 8 114 93 198 1.44e-20 88.2
MS.gene029755.t1 AT1G26780 42.857 105 57 2 6 109 96 198 1.47e-20 87.8
MS.gene029755.t1 AT4G32730 38.679 106 62 2 6 110 85 188 1.47e-20 90.1
MS.gene029755.t1 AT4G32730 35.577 104 65 2 8 110 35 137 4.01e-13 68.2
MS.gene029755.t1 AT4G32730 38.679 106 62 2 6 110 85 188 1.59e-20 89.7
MS.gene029755.t1 AT4G32730 35.577 104 65 2 8 110 35 137 4.99e-13 68.2
MS.gene029755.t1 AT4G32730 38.679 106 62 2 6 110 85 188 1.59e-20 89.7
MS.gene029755.t1 AT4G32730 35.577 104 65 2 8 110 35 137 4.99e-13 68.2
MS.gene029755.t1 AT4G32730 38.679 106 62 2 6 110 85 188 1.59e-20 89.7
MS.gene029755.t1 AT4G32730 35.577 104 65 2 8 110 35 137 4.99e-13 68.2
MS.gene029755.t1 AT4G32730 38.679 106 62 2 6 110 85 188 1.59e-20 89.7
MS.gene029755.t1 AT4G32730 35.577 104 65 2 8 110 35 137 4.99e-13 68.2
MS.gene029755.t1 AT1G22640 62.712 59 22 0 52 110 1 59 6.87e-20 84.3
MS.gene029755.t1 AT4G00540 43.243 111 57 3 5 111 100 208 1.46e-19 86.3
MS.gene029755.t1 AT4G00540 32.432 111 67 2 8 110 46 156 9.19e-11 60.8
MS.gene029755.t1 AT4G00540 43.243 111 57 3 5 111 98 206 2.69e-19 85.9
MS.gene029755.t1 AT2G25230 36.752 117 70 3 1 116 19 132 7.12e-19 82.0
MS.gene029755.t1 AT5G59780 71.111 45 13 0 67 111 4 48 3.46e-18 79.0
MS.gene029755.t1 AT2G37630 34.307 137 86 2 11 145 7 141 5.36e-18 81.6
MS.gene029755.t1 AT3G46130 71.111 45 13 0 67 111 4 48 5.36e-18 79.0
MS.gene029755.t1 AT1G18960 37.864 103 61 2 8 110 10 109 2.38e-16 76.6
MS.gene029755.t1 AT1G71030 42.353 85 48 1 26 110 1 84 2.82e-16 74.3
MS.gene029755.t1 AT1G71030 50.000 66 33 0 45 110 5 70 7.84e-16 72.8
MS.gene029755.t1 AT5G40430 35.714 112 67 4 1 111 47 154 1.98e-15 73.2
MS.gene029755.t1 AT1G66380 44.706 85 45 1 1 83 1 85 2.11e-15 70.1
MS.gene029755.t1 AT1G14350 30.061 163 103 2 10 172 27 178 2.22e-15 74.7
MS.gene029755.t1 AT1G14350 30.061 163 103 2 10 172 27 178 2.22e-15 74.7
MS.gene029755.t1 AT2G02820 36.275 102 64 1 10 111 32 132 1.65e-14 71.6
MS.gene029755.t1 AT2G02820 36.275 102 64 1 10 111 32 132 2.40e-14 71.6
MS.gene029755.t1 AT2G02820 36.275 102 64 1 10 111 32 132 3.18e-14 71.2
MS.gene029755.t1 AT5G39700 33.929 112 73 1 7 118 55 165 1.73e-13 66.6
MS.gene029755.t1 AT4G25560 60.000 45 18 0 65 109 3 47 1.24e-12 65.1
MS.gene029755.t1 AT3G18100 36.036 111 68 2 7 116 545 653 2.32e-12 65.9
MS.gene029755.t1 AT3G18100 36.036 111 68 2 7 116 497 605 2.79e-12 65.9
MS.gene029755.t1 AT3G18100 36.036 111 68 2 7 116 384 492 3.13e-12 65.5
MS.gene029755.t1 AT3G18100 36.036 111 68 2 7 116 332 440 4.07e-12 65.1
MS.gene029755.t1 AT1G74650 50.000 60 28 1 71 128 1 60 1.38e-11 62.4
MS.gene029755.t1 AT3G28910 62.500 40 15 0 71 110 1 40 5.17e-11 60.8
MS.gene029755.t1 AT5G61420 69.231 39 12 0 75 113 2 40 6.15e-11 61.2

Find 55 sgRNAs with CRISPR-Local

Find 88 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTCTCCTCTTCAACATTAAA+AGG 0.180903 1.2:+47960130 None:intergenic
TATGATACTTGGGATTATTC+AGG 0.272070 1.2:-47959105 MS.gene029755:CDS
ATTTCATTGTCTGTTCTTCC+TGG 0.279245 1.2:+47959562 None:intergenic
ACAATGAAATCAAGAATTAT+TGG 0.301012 1.2:-47959549 MS.gene029755:CDS
AAAGGGCCATGTTTGAGATT+TGG 0.303849 1.2:+47960148 None:intergenic
AAGATTGCTCGTAGGCTTCC+AGG 0.337137 1.2:-47959580 MS.gene029755:CDS
CCAAGTATCATATTCTTGTT+GGG 0.357858 1.2:+47959116 None:intergenic
GGTGACAAGGAAAATGAAAT+AGG 0.361070 1.2:-47959183 MS.gene029755:CDS
CCCAAGTATCATATTCTTGT+TGG 0.367284 1.2:+47959115 None:intergenic
TAGTTCTCCCTTATCAGATT+GGG 0.371526 1.2:-47959274 MS.gene029755:CDS
GAAGAATTGCAAAATGGATA+TGG 0.372171 1.2:-47959204 MS.gene029755:CDS
TGGATAGAAGAATTGCAAAA+TGG 0.381205 1.2:-47959210 MS.gene029755:CDS
AAAATTTGCGTAAGGGGACT+TGG 0.391844 1.2:-47960678 MS.gene029755:CDS
CCCAACAAGAATATGATACT+TGG 0.395763 1.2:-47959116 MS.gene029755:CDS
TAAGCTTTGTGACCCGTCTT+GGG 0.397434 1.2:-47960630 MS.gene029755:CDS
TTTGCTCTTGTGCAGGACTT+AGG 0.399204 1.2:-47960216 MS.gene029755:intron
TCTCATTCCCCAATCTGATA+AGG 0.405428 1.2:+47959266 None:intergenic
TGGAAGCCTACGAGCAATCT+TGG 0.418838 1.2:+47959582 None:intergenic
GATATTCTACTTTCATGATA+AGG 0.428909 1.2:+47959237 None:intergenic
TGTTCATCTTCAGCAGCAAT+GGG 0.432168 1.2:-47960101 MS.gene029755:CDS
CTCATTCCCCAATCTGATAA+GGG 0.439500 1.2:+47959267 None:intergenic
ATAAGCTTTGTGACCCGTCT+TGG 0.451081 1.2:-47960631 MS.gene029755:CDS
CTTTGTCTCAACCTCACTGT+TGG 0.451386 1.2:+47959311 None:intergenic
CCCGTCTTGGGGAACGAAGA+TGG 0.455075 1.2:-47960618 MS.gene029755:CDS
TTGTTCATCTTCAGCAGCAA+TGG 0.478653 1.2:-47960102 MS.gene029755:CDS
ATAGTTCTCCCTTATCAGAT+TGG 0.480169 1.2:-47959275 MS.gene029755:CDS
CCGTCTTGGGGAACGAAGAT+GGG 0.508003 1.2:-47960617 MS.gene029755:CDS
TGTTGTTGGAATCATGTGCT+AGG 0.515250 1.2:+47959352 None:intergenic
CCATCTTCGTTCCCCAAGAC+GGG 0.522823 1.2:+47960618 None:intergenic
CCCATCTTCGTTCCCCAAGA+CGG 0.524030 1.2:+47960617 None:intergenic
GATTCCCTTGCTAAAGTAGC+TGG 0.532159 1.2:-47960595 MS.gene029755:intron
GCAAGGAGAAAATTTGCGTA+AGG 0.537367 1.2:-47960686 MS.gene029755:CDS
TCTCCTCTTCAACATTAAAA+GGG 0.538793 1.2:+47960131 None:intergenic
ATGAAAGTAGAATATCAGAT+TGG 0.543464 1.2:-47959230 MS.gene029755:CDS
GTGGTAAAAGCTGTAGGCTA+AGG 0.549118 1.2:-47960189 MS.gene029755:CDS
CAACAGTGAGGTTGAGACAA+AGG 0.551028 1.2:-47959310 MS.gene029755:CDS
AAGGAGAAAATTTGCGTAAG+GGG 0.561164 1.2:-47960684 MS.gene029755:CDS
CAAGTATCATATTCTTGTTG+GGG 0.561630 1.2:+47959117 None:intergenic
GGAGAAGTGGTAAAAGCTGT+AGG 0.567445 1.2:-47960195 MS.gene029755:CDS
GTAAAAGCTGTAGGCTAAGG+TGG 0.567893 1.2:-47960186 MS.gene029755:CDS
CCAACAAGAATATGATACTT+GGG 0.577052 1.2:-47959115 MS.gene029755:CDS
AAATATCAAGCAGCCATGCA+AGG 0.579777 1.2:-47960703 None:intergenic
AAGCTTTGTGACCCGTCTTG+GGG 0.581255 1.2:-47960629 MS.gene029755:CDS
CAAGGAGAAAATTTGCGTAA+GGG 0.588447 1.2:-47960685 MS.gene029755:CDS
AGAGTACAAGTTCAACAAGA+AGG 0.589009 1.2:-47959508 MS.gene029755:intron
TGTGCAGGACTTAGGAGAAG+TGG 0.591701 1.2:-47960208 MS.gene029755:intron
AGTTCTCCCTTATCAGATTG+GGG 0.592547 1.2:-47959273 MS.gene029755:CDS
ACATACCAGCTACTTTAGCA+AGG 0.595671 1.2:+47960590 None:intergenic
TAAGGGGACTTGGCTTCAAG+AGG 0.603937 1.2:-47960668 MS.gene029755:CDS
CTTCGTCCAAATCTCAAACA+TGG 0.606795 1.2:-47960154 MS.gene029755:CDS
CATACCAGCTACTTTAGCAA+GGG 0.635589 1.2:+47960591 None:intergenic
GCAAAATGGATATGGTGACA+AGG 0.652819 1.2:-47959196 MS.gene029755:CDS
GGTGGTCCAAGATTGCTCGT+AGG 0.699809 1.2:-47959588 MS.gene029755:CDS
TGATGTGATTTCCAACAGTG+AGG 0.707051 1.2:-47959322 MS.gene029755:CDS
GTTCATCTTCAGCAGCAATG+GGG 0.726709 1.2:-47960100 MS.gene029755:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! TGAAAAAATATAAATATACA+CGG + chr1.2:47959985-47960004 None:intergenic 10.0%
!!! TTTTGACAAAAAATAATTAA+AGG + chr1.2:47960123-47960142 None:intergenic 10.0%
!!! ATTTTTTCAAAGAATATTGA+CGG - chr1.2:47959996-47960015 MS.gene029755:intron 15.0%
!!! CAAGATTTTAATAGAATAAA+TGG - chr1.2:47960615-47960634 MS.gene029755:CDS 15.0%
!!! CATTTTTTTTTTTTATTCTC+AGG - chr1.2:47960375-47960394 MS.gene029755:intron 15.0%
!!! TTATATTTTTTCAACTTCAT+AGG + chr1.2:47959788-47959807 None:intergenic 15.0%
!! AATCTATAACAATCTATACT+AGG + chr1.2:47960094-47960113 None:intergenic 20.0%
!! ACAATGAAATCAAGAATTAT+TGG - chr1.2:47960225-47960244 MS.gene029755:intron 20.0%
!! ATGATATTAATAGCACAAAT+AGG + chr1.2:47960295-47960314 None:intergenic 20.0%
!! GTAACAATAACAATGAAAAT+AGG - chr1.2:47960165-47960184 MS.gene029755:CDS 20.0%
!! TGTAAGAACTAATATTACAA+AGG - chr1.2:47959912-47959931 MS.gene029755:intron 20.0%
!!! ACTTTTTTTTTTTGACAAGA+GGG + chr1.2:47959717-47959736 None:intergenic 20.0%
! ACAATAACAATGAAAATAGG+TGG - chr1.2:47960168-47960187 MS.gene029755:CDS 25.0%
! ATGAAAGTAGAATATCAGAT+TGG - chr1.2:47960544-47960563 MS.gene029755:intron 25.0%
! CATGCATATGATGAAAAATA+TGG - chr1.2:47959526-47959545 MS.gene029755:CDS 25.0%
! GATATTCTACTTTCATGATA+AGG + chr1.2:47960540-47960559 None:intergenic 25.0%
! TTACTAGTTACTACTAACAT+GGG + chr1.2:47959749-47959768 None:intergenic 25.0%
! TTTGATATTCCAAATAATCG+CGG - chr1.2:47959276-47959295 MS.gene029755:CDS 25.0%
!!! CACTTTTTTTTTTTGACAAG+AGG + chr1.2:47959718-47959737 None:intergenic 25.0%
CAAGTATCATATTCTTGTTG+GGG + chr1.2:47960660-47960679 None:intergenic 30.0%
CCAACAAGAATATGATACTT+GGG - chr1.2:47960659-47960678 MS.gene029755:CDS 30.0%
CCAAGTATCATATTCTTGTT+GGG + chr1.2:47960661-47960680 None:intergenic 30.0%
GAAGAATTGCAAAATGGATA+TGG - chr1.2:47960570-47960589 MS.gene029755:intron 30.0%
GTTACTAGTTACTACTAACA+TGG + chr1.2:47959750-47959769 None:intergenic 30.0%
TAGAGAGAAAATAGCATTTG+TGG - chr1.2:47959240-47959259 MS.gene029755:CDS 30.0%
TATGATACTTGGGATTATTC+AGG - chr1.2:47960669-47960688 MS.gene029755:CDS 30.0%
TCTCCTCTTCAACATTAAAA+GGG + chr1.2:47959646-47959665 None:intergenic 30.0%
TGGATAGAAGAATTGCAAAA+TGG - chr1.2:47960564-47960583 MS.gene029755:intron 30.0%
! TCATAGGCTTAGACATTTTA+TGG + chr1.2:47959772-47959791 None:intergenic 30.0%
!! GGATTATTCAGGTTTTCTAT+GGG - chr1.2:47960680-47960699 MS.gene029755:CDS 30.0%
AAGGAGAAAATTTGCGTAAG+GGG - chr1.2:47959090-47959109 MS.gene029755:CDS 35.0%
AGAGTACAAGTTCAACAAGA+AGG - chr1.2:47960266-47960285 MS.gene029755:intron 35.0%
ATAGTTCTCCCTTATCAGAT+TGG - chr1.2:47960499-47960518 MS.gene029755:intron 35.0%
ATTTCATTGTCTGTTCTTCC+TGG + chr1.2:47960215-47960234 None:intergenic 35.0%
CAAGGAGAAAATTTGCGTAA+GGG - chr1.2:47959089-47959108 MS.gene029755:CDS 35.0%
CCCAACAAGAATATGATACT+TGG - chr1.2:47960658-47960677 MS.gene029755:CDS 35.0%
CCCAAGTATCATATTCTTGT+TGG + chr1.2:47960662-47960681 None:intergenic 35.0%
CTCTCCTCTTCAACATTAAA+AGG + chr1.2:47959647-47959666 None:intergenic 35.0%
GGTGACAAGGAAAATGAAAT+AGG - chr1.2:47960591-47960610 MS.gene029755:intron 35.0%
TAAATAAAGATCCGCGATCT+AGG + chr1.2:47959376-47959395 None:intergenic 35.0%
TAGTTCTCCCTTATCAGATT+GGG - chr1.2:47960500-47960519 MS.gene029755:intron 35.0%
!! CACATCAATGCTTTTGTTGT+TGG + chr1.2:47960439-47960458 None:intergenic 35.0%
!! GGGATTATTCAGGTTTTCTA+TGG - chr1.2:47960679-47960698 MS.gene029755:CDS 35.0%
AAAATTTGCGTAAGGGGACT+TGG - chr1.2:47959096-47959115 MS.gene029755:CDS 40.0%
ACATTTGTTTGCTCTTGTGC+AGG - chr1.2:47959551-47959570 MS.gene029755:CDS 40.0%
AGTTCTCCCTTATCAGATTG+GGG - chr1.2:47960501-47960520 MS.gene029755:intron 40.0%
CTCATTCCCCAATCTGATAA+GGG + chr1.2:47960510-47960529 None:intergenic 40.0%
CTTCGTCCAAATCTCAAACA+TGG - chr1.2:47959620-47959639 MS.gene029755:intron 40.0%
GCAAAATGGATATGGTGACA+AGG - chr1.2:47960578-47960597 MS.gene029755:intron 40.0%
GCAAGGAGAAAATTTGCGTA+AGG - chr1.2:47959088-47959107 MS.gene029755:CDS 40.0%
TAGCAGTTGCATTGTGGTTT+CGG - chr1.2:47959324-47959343 MS.gene029755:CDS 40.0%
TCTCATTCCCCAATCTGATA+AGG + chr1.2:47960511-47960530 None:intergenic 40.0%
TGATGTGATTTCCAACAGTG+AGG - chr1.2:47960452-47960471 MS.gene029755:intron 40.0%
TGTTCATCTTCAGCAGCAAT+GGG - chr1.2:47959673-47959692 MS.gene029755:intron 40.0%
TGTTGTTGGAATCATGTGCT+AGG + chr1.2:47960425-47960444 None:intergenic 40.0%
TTATGTTGCGAGTGCAATTG+CGG - chr1.2:47959454-47959473 MS.gene029755:intron 40.0%
TTGTTCATCTTCAGCAGCAA+TGG - chr1.2:47959672-47959691 MS.gene029755:intron 40.0%
! AAAGGGCCATGTTTGAGATT+TGG + chr1.2:47959629-47959648 None:intergenic 40.0%
! ACATACCAGCTACTTTAGCA+AGG + chr1.2:47959187-47959206 None:intergenic 40.0%
! CATACCAGCTACTTTAGCAA+GGG + chr1.2:47959186-47959205 None:intergenic 40.0%
! TGGCCCTTTTAATGTTGAAG+AGG - chr1.2:47959640-47959659 MS.gene029755:intron 40.0%
CAACAGTGAGGTTGAGACAA+AGG - chr1.2:47960464-47960483 MS.gene029755:intron 45.0%
CCACAATGCAACTGCTATTG+AGG + chr1.2:47959321-47959340 None:intergenic 45.0%
CCTCAATAGCAGTTGCATTG+TGG - chr1.2:47959318-47959337 MS.gene029755:CDS 45.0%
CGATCTAGGTCACAACACAA+TGG + chr1.2:47959362-47959381 None:intergenic 45.0%
CTTTGTCTCAACCTCACTGT+TGG + chr1.2:47960466-47960485 None:intergenic 45.0%
GATTCCCTTGCTAAAGTAGC+TGG - chr1.2:47959179-47959198 MS.gene029755:CDS 45.0%
GGAGAAGTGGTAAAAGCTGT+AGG - chr1.2:47959579-47959598 MS.gene029755:CDS 45.0%
GTAAAAGCTGTAGGCTAAGG+TGG - chr1.2:47959588-47959607 MS.gene029755:CDS 45.0%
GTGGTAAAAGCTGTAGGCTA+AGG - chr1.2:47959585-47959604 MS.gene029755:CDS 45.0%
GTTCATCTTCAGCAGCAATG+GGG - chr1.2:47959674-47959693 MS.gene029755:intron 45.0%
TTGTGTTGTGACCTAGATCG+CGG - chr1.2:47959362-47959381 MS.gene029755:CDS 45.0%
TTTGCTCTTGTGCAGGACTT+AGG - chr1.2:47959558-47959577 MS.gene029755:CDS 45.0%
! ATAAGCTTTGTGACCCGTCT+TGG - chr1.2:47959143-47959162 MS.gene029755:CDS 45.0%
! TAAGCTTTGTGACCCGTCTT+GGG - chr1.2:47959144-47959163 MS.gene029755:CDS 45.0%
AAGATTGCTCGTAGGCTTCC+AGG - chr1.2:47960194-47960213 MS.gene029755:CDS 50.0%
CGCATTGGACCGCGATTATT+TGG + chr1.2:47959288-47959307 None:intergenic 50.0%
GCGGTCCAATGCGATCAATA+CGG - chr1.2:47959295-47959314 MS.gene029755:CDS 50.0%
TAAGGGGACTTGGCTTCAAG+AGG - chr1.2:47959106-47959125 MS.gene029755:CDS 50.0%
TGGAAGCCTACGAGCAATCT+TGG + chr1.2:47960195-47960214 None:intergenic 50.0%
TGTGCAGGACTTAGGAGAAG+TGG - chr1.2:47959566-47959585 MS.gene029755:CDS 50.0%
! AAGCTTTGTGACCCGTCTTG+GGG - chr1.2:47959145-47959164 MS.gene029755:CDS 50.0%
! TGAGGCCGTATTGATCGCAT+TGG + chr1.2:47959303-47959322 None:intergenic 50.0%
CCATCTTCGTTCCCCAAGAC+GGG + chr1.2:47959159-47959178 None:intergenic 55.0%
CCCATCTTCGTTCCCCAAGA+CGG + chr1.2:47959160-47959179 None:intergenic 55.0%
CCGTCTTGGGGAACGAAGAT+GGG - chr1.2:47959157-47959176 MS.gene029755:CDS 55.0%
GGTGGTCCAAGATTGCTCGT+AGG - chr1.2:47960186-47960205 MS.gene029755:CDS 55.0%
CCCGTCTTGGGGAACGAAGA+TGG - chr1.2:47959156-47959175 MS.gene029755:CDS 60.0%


Chromosome Type Strat End Strand Name
chr1.2 gene 47959086 47960710 47959086 ID=MS.gene029755
chr1.2 mRNA 47959086 47960710 47959086 ID=MS.gene029755.t1;Parent=MS.gene029755
chr1.2 exon 47960596 47960710 47960596 ID=MS.gene029755.t1.exon1;Parent=MS.gene029755.t1
chr1.2 CDS 47960596 47960710 47960596 ID=cds.MS.gene029755.t1;Parent=MS.gene029755.t1
chr1.2 exon 47960094 47960223 47960094 ID=MS.gene029755.t1.exon2;Parent=MS.gene029755.t1
chr1.2 CDS 47960094 47960223 47960094 ID=cds.MS.gene029755.t1;Parent=MS.gene029755.t1
chr1.2 exon 47959509 47959609 47959509 ID=MS.gene029755.t1.exon3;Parent=MS.gene029755.t1
chr1.2 CDS 47959509 47959609 47959509 ID=cds.MS.gene029755.t1;Parent=MS.gene029755.t1
chr1.2 exon 47959086 47959399 47959086 ID=MS.gene029755.t1.exon4;Parent=MS.gene029755.t1
chr1.2 CDS 47959086 47959399 47959086 ID=cds.MS.gene029755.t1;Parent=MS.gene029755.t1
Gene Sequence

>MS.gene029755

ATGCAAGGAGAAAATTTGCGTAAGGGGACTTGGCTTCAAGAGGAAGATGAACAATTGATAAGCTTTGTGACCCGTCTTGGGGAACGAAGATGGGATTCCCTTGCTAAAGTAGCTGGTATGTATGTATGAATCTTGTTTAATTATGATGATATTATAGAGAGAAAATAGCATTTGTGGTTGCATTGCAATCTTTGATATTCCAAATAATCGCGGTCCAATGCGATCAATACGGCCTCAATAGCAGTTGCATTGTGGTTTCGGCAACATTAATAACCATTGTGTTGTGACCTAGATCGCGGATCTTTATTTAAAATCTTAGTTACAATTATATAGTGATAATGATGAAATTGTAGAGAATTTAAAATCATTTATGTTGCGAGTGCAATTGCGGTTACAAAACGCAATTTAAAATAGATCATATTGATAATTTATATTTTGTGCATGCATATGATGAAAAATATGGTAACATTTGTTTGCTCTTGTGCAGGACTTAGGAGAAGTGGTAAAAGCTGTAGGCTAAGGTGGTTGAACTATCTTCGTCCAAATCTCAAACATGGCCCTTTTAATGTTGAAGAGGAGAGACTTATTGTTCATCTTCAGCAGCAATGGGGTAACAAGTGAGTTTCTTCCCTCTTGTCAAAAAAAAAAAGTGAGTTTCTTCCCATGTTAGTAGTAACTAGTAACCATAAAATGTCTAAGCCTATGAAGTTGAAAAAATATAATATAGTATATAGTTGAATTTAATCAGTATGCATTGTCAATGTAAAAAAGAGAAAATTATAGATACATCTAATTATATCTCATCACGTAAATAATACTAAGATATTGTAAGAACTAATATTACAAAGGAATATAATGAGATATGATTCGATGCATGCGAAAAAAAGTTACATTAACCGTGTATATTTATATTTTTTCAAAGAATATTGACGGTGCATATAAATTAAATATTAAATATGTGTAACATAATGAAATATATACTTTGTGTTTACAATGCTATGTGCTCCTAGTATAGATTGTTATAGATTATATAACCTTTAATTATTTTTTGTCAAAAAAAAAATTTATTTGTTAAATTTGTAACAATAACAATGAAAATAGGTGGTCCAAGATTGCTCGTAGGCTTCCAGGAAGAACAGACAATGAAATCAAGAATTATTGGAGAACTCATTTACAAAAGAGAGTACAAGTTCAACAAGAAGGTGACCTATTTGTGCTATTAATATCATATACATAATTGCTTGTGAAAATATTGCACATATTTTTCTTTTTTAATTCACATACACTTACATTTTTTTTTTTTATTCTCAGGTGAGTTCATGTATGAAGTAGAAAACCTAGCACATGATTCCAACAACAAAAGCATTGATGTGATTTCCAACAGTGAGGTTGAGACAAAGGAAAGCTCTGTAGATAGTTCTCCCTTATCAGATTGGGGAATGAGAAACTCACCTTATCATGAAAGTAGAATATCAGATTGGATAGAAGAATTGCAAAATGGATATGGTGACAAGGAAAATGAAATAGGACAAGATTTTAATAGAATAAATGGATCAATGTATGAATATAATCCCCAACAAGAATATGATACTTGGGATTATTCAGGTTTTCTATGGGACTTGTGA

Protein sequence

>MS.gene029755.t1

MQGENLRKGTWLQEEDEQLISFVTRLGERRWDSLAKVAGLRRSGKSCRLRWLNYLRPNLKHGPFNVEEERLIVHLQQQWGNKWSKIARRLPGRTDNEIKNYWRTHLQKRVQVQQEGEFMYEVENLAHDSNNKSIDVISNSEVETKESSVDSSPLSDWGMRNSPYHESRISDWIEELQNGYGDKENEIGQDFNRINGSMYEYNPQQEYDTWDYSGFLWDL