AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene029877


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene029877.t1 MTR_1g066940 97.808 1551 32 2 1 1551 1 1549 0.0 3129
MS.gene029877.t1 MTR_1g066940 97.843 1530 31 2 1 1530 1 1528 0.0 3083
MS.gene029877.t1 MTR_1g066940 97.803 1502 31 2 1 1502 1 1500 0.0 3025
MS.gene029877.t1 MTR_4g073370 48.841 690 300 9 912 1551 1195 1881 0.0 609
MS.gene029877.t1 MTR_4g073370 37.004 781 420 8 97 810 175 950 2.49e-128 442
MS.gene029877.t1 MTR_7g061200 48.564 383 124 6 919 1297 143 456 1.71e-101 333
MS.gene029877.t1 MTR_7g061200 48.276 116 58 1 713 826 19 134 1.16e-26 115
MS.gene029877.t1 MTR_7g100660 51.779 253 105 7 92 337 25 267 1.00e-65 224
MS.gene029877.t1 MTR_1g066920 58.394 137 15 3 1007 1142 1 96 3.64e-38 139
MS.gene029877.t1 MTR_2g033040 28.571 462 259 15 1102 1551 622 1024 2.23e-35 147
MS.gene029877.t1 MTR_3g099777 28.750 400 238 10 1155 1548 3322 3680 1.20e-34 146
MS.gene029877.t1 MTR_5g066710 28.607 402 236 11 1155 1548 3294 3652 1.92e-32 139
MS.gene029877.t1 MTR_4g094708 26.872 454 261 14 1105 1548 3363 3755 3.59e-32 138
MS.gene029877.t1 MTR_4g094705 26.490 453 264 14 1105 1548 3342 3734 5.55e-31 134
MS.gene029877.t1 MTR_7g103210 26.809 470 262 13 1105 1551 738 1148 3.19e-27 121
MS.gene029877.t1 MTR_2g025810 23.691 363 225 8 1181 1537 484 800 7.86e-21 100
MS.gene029877.t1 MTR_4g133120 25.132 378 223 8 1181 1547 548 876 5.95e-19 94.0
MS.gene029877.t1 MTR_2g025830 25.886 367 212 13 1181 1537 489 805 2.09e-18 92.0
MS.gene029877.t1 MTR_2g025790 24.523 367 209 13 1185 1537 499 811 7.76e-18 90.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene029877.t1 AT5G02880 54.401 1568 632 18 1 1551 1 1502 0.0 1555
MS.gene029877.t1 AT5G02880 53.846 1547 631 18 1 1530 1 1481 0.0 1514
MS.gene029877.t1 AT4G38600 48.547 688 293 9 918 1551 1208 1888 0.0 605
MS.gene029877.t1 AT4G38600 36.829 782 414 11 100 810 192 964 4.21e-133 456
MS.gene029877.t1 AT4G38600 48.547 688 293 9 918 1551 1208 1888 0.0 605
MS.gene029877.t1 AT4G38600 36.829 782 414 11 100 810 192 964 4.21e-133 456
MS.gene029877.t1 AT4G38600 48.110 688 293 10 918 1551 1117 1794 0.0 594
MS.gene029877.t1 AT4G38600 36.829 782 414 11 100 810 119 891 4.27e-133 454
MS.gene029877.t1 AT3G17205 28.322 459 264 12 1102 1551 627 1029 2.50e-36 150
MS.gene029877.t1 AT3G17205 28.322 459 264 12 1102 1551 627 1029 2.50e-36 150
MS.gene029877.t1 AT3G17205 28.322 459 264 12 1102 1551 613 1015 2.58e-36 150
MS.gene029877.t1 AT1G55860 26.946 501 289 15 1058 1548 3245 3678 1.15e-32 139
MS.gene029877.t1 AT1G70320 27.093 454 260 13 1105 1548 3263 3655 2.54e-32 138
MS.gene029877.t1 AT3G53090 27.312 465 256 13 1110 1551 737 1142 6.10e-30 130
MS.gene029877.t1 AT3G53090 27.312 465 256 13 1110 1551 737 1142 6.10e-30 130
MS.gene029877.t1 AT4G12570 24.185 368 219 12 1181 1537 540 858 2.64e-13 75.9

Find 320 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
TGCTTACATTATAAATTAAT+TGG 0.108360 1.4:+53779012 None:intergenic
AGCCTGCAAGTTTGTCTTTA+TGG 0.127172 1.4:+53775016 None:intergenic
GCGTTGGCAGTATGCCTTTC+TGG 0.146304 1.4:-53775403 MS.gene029877:CDS
GGCAGTTCATCTACCATTTC+TGG 0.157663 1.4:+53780322 None:intergenic
ACAGGAATCCATTCTCTTTA+TGG 0.164689 1.4:-53774987 MS.gene029877:CDS
TTTATCACTTGGCCAATATA+TGG 0.187779 1.4:-53776934 MS.gene029877:CDS
GCCTTCTATAAACTTATTCT+TGG 0.198719 1.4:-53774819 MS.gene029877:CDS
CCTGATACTGTTCTTGCTTC+AGG 0.204370 1.4:-53774494 MS.gene029877:CDS
CAAATTATGGACAAGCTTAT+TGG 0.211903 1.4:-53777020 MS.gene029877:CDS
TAGAAGAAGATTGCATAATA+TGG 0.213469 1.4:+53779294 None:intergenic
CTTACAGGCAGGGGCAATTA+TGG 0.231409 1.4:-53779580 MS.gene029877:CDS
TTTCTGGTGTAATCAGTTAT+TGG 0.236134 1.4:-53775387 MS.gene029877:CDS
ATCATCTTCTTCAGGAATTC+AGG 0.237048 1.4:-53776152 MS.gene029877:intron
ATTGAGTGCAAAGAAGAAAA+AGG 0.254801 1.4:+53776585 None:intergenic
TTTGTTTGTTTGACCAAATC+TGG 0.262499 1.4:-53777665 MS.gene029877:CDS
TTTGCACAGGTGTTTAATTC+TGG 0.267152 1.4:-53777734 MS.gene029877:intron
ACAACCACTTGCTTGCTTAC+AGG 0.269423 1.4:-53779595 MS.gene029877:CDS
TGTACGTTGCTCAGAATAAT+AGG 0.270713 1.4:+53776741 None:intergenic
AATTGAAGCGGTGGACTTTC+AGG 0.276996 1.4:+53776483 None:intergenic
CCCGTTTCACCTTGAAATAT+TGG 0.277617 1.4:+53777616 None:intergenic
TAGCAACAACTTGACCTAAA+AGG 0.279896 1.4:+53774886 None:intergenic
TCCAATGCTAGTTGATTATT+CGG 0.280130 1.4:+53777902 None:intergenic
TTTCTTGAAGTTATTTATAA+AGG 0.284298 1.4:-53777426 MS.gene029877:CDS
AGATAATGTTGTTATCTATA+AGG 0.287139 1.4:-53779865 MS.gene029877:CDS
ACACATCTCTTAAGTGTAAA+TGG 0.294828 1.4:-53779050 MS.gene029877:CDS
TAGTGAACTTGTTTCTGATT+TGG 0.305509 1.4:-53775657 MS.gene029877:CDS
ACTCTATATCAGGCAATTCT+TGG 0.313246 1.4:-53775872 MS.gene029877:CDS
ACCAGAAAGATCATCAAAAT+TGG 0.318013 1.4:-53777369 MS.gene029877:CDS
GCCTGATATAGAGTCAATTT+AGG 0.318810 1.4:+53775881 None:intergenic
TAGGGTACTGGATCAAATTA+TGG 0.322008 1.4:-53777033 MS.gene029877:CDS
TCCAAGAATAAGTTTATAGA+AGG 0.323416 1.4:+53774818 None:intergenic
CCTTAACAAAACGTACTTTC+AGG 0.327563 1.4:+53776661 None:intergenic
AGTTTCAAGCACTAGTTAAC+AGG 0.335099 1.4:-53774628 MS.gene029877:CDS
CTGATACTGTTCTTGCTTCA+GGG 0.335158 1.4:-53774493 MS.gene029877:CDS
TCGTTTGCTACCGTTCCTAA+TGG 0.341445 1.4:-53776705 MS.gene029877:CDS
CTCCACAAGCATGCCAGATT+TGG 0.343831 1.4:+53777652 None:intergenic
TTTGCTTGACAGGGTTTGAT+AGG 0.343922 1.4:-53778876 MS.gene029877:intron
TGCTCACGAACTCATTTAGT+TGG 0.352397 1.4:+53775477 None:intergenic
TCCTAAATTGACTCTATATC+AGG 0.352943 1.4:-53775882 MS.gene029877:CDS
CACTGGTCTTGGACCAACTT+TGG 0.353799 1.4:-53775114 MS.gene029877:CDS
AGGTTTCACAGCTGCTCTAT+AGG 0.360588 1.4:+53775784 None:intergenic
CGGGATCAGTCGTAGCCTTC+AGG 0.360602 1.4:-53778833 MS.gene029877:CDS
CCAAGCTTCTGCAGGAGATC+TGG 0.360951 1.4:+53777854 None:intergenic
TTCTCAGAATCATATAATTC+CGG 0.363354 1.4:+53777158 None:intergenic
AGAAAGCCCCACACCTTTCA+TGG 0.366588 1.4:-53779326 MS.gene029877:CDS
CACCCCTTTCTATATTAATC+AGG 0.366699 1.4:-53776800 MS.gene029877:CDS
ATAGATAACAACATTATCTC+TGG 0.375506 1.4:+53779869 None:intergenic
AGTTTACCGCGACCGGATCT+TGG 0.377364 1.4:-53775213 MS.gene029877:CDS
GCTGGGGAATCATCTTCTTC+AGG 0.379627 1.4:-53776160 MS.gene029877:CDS
TACTTCAAACTGGCAGCATT+TGG 0.381453 1.4:-53775323 MS.gene029877:CDS
TTAAGAACGCCAATATTTCA+AGG 0.382881 1.4:-53777625 MS.gene029877:intron
TTATCACTTGGCCAATATAT+GGG 0.385628 1.4:-53776933 MS.gene029877:CDS
TCTCTGGCTCTTCCTCTGAA+TGG 0.387400 1.4:+53780164 None:intergenic
TACCATAAAGACAAACTTGC+AGG 0.388688 1.4:-53775018 MS.gene029877:CDS
GATAATGTTGTTATCTATAA+GGG 0.388751 1.4:-53779864 MS.gene029877:CDS
TATAGAAGGCTTTAGAAAAG+TGG 0.391315 1.4:+53774832 None:intergenic
GAAGAAGTGGGCACTGGTCT+TGG 0.391848 1.4:-53775125 MS.gene029877:CDS
ACACAGGACCTTGTATTTGA+TGG 0.392532 1.4:+53776459 None:intergenic
CCTGAAGCAAGAACAGTATC+AGG 0.394520 1.4:+53774494 None:intergenic
GCTTACATTATAAATTAATT+GGG 0.396042 1.4:+53779013 None:intergenic
CTGGTTAAAGCCGGATTTGA+AGG 0.396606 1.4:+53774281 None:intergenic
ATGCAATCTTCTTCTATATG+AGG 0.398799 1.4:-53779287 MS.gene029877:CDS
GCAACAGATGAGGGACTCTA+TGG 0.399457 1.4:-53775432 MS.gene029877:CDS
TTGTTGGTGGACACTGTAAT+CGG 0.400693 1.4:-53778725 MS.gene029877:CDS
ATCATGTGATTCAGATGAAT+TGG 0.400762 1.4:-53780125 MS.gene029877:CDS
AGGAAATTCTGAGTTGGAAC+AGG 0.403866 1.4:-53774579 MS.gene029877:CDS
GGTCTAGGATGTGATGTCTT+TGG 0.403891 1.4:+53776205 None:intergenic
AAGACAAAGATCCTCAATTC+TGG 0.405489 1.4:+53774538 None:intergenic
TCTGTTTCTTCTTAAAAGCT+TGG 0.412107 1.4:-53775609 MS.gene029877:CDS
CCATCAGCTGAATCCTTCTC+TGG 0.415608 1.4:+53780148 None:intergenic
CAGATCTCCTGCAGAAGCTT+GGG 0.415893 1.4:-53777853 MS.gene029877:CDS
ACTCAATTGAAAGATATCTA+TGG 0.416876 1.4:-53776569 MS.gene029877:CDS
TTTGCGGAGAGAACGATTCT+TGG 0.417616 1.4:-53770912 MS.gene029877:CDS
TTACCTTGAAGGACAACCTC+TGG 0.418065 1.4:-53775906 MS.gene029877:CDS
CCTGCACGTTCTGAGATTGC+TGG 0.419146 1.4:+53776426 None:intergenic
GCTGAGCGCACTGACTTCAT+TGG 0.424825 1.4:-53776772 MS.gene029877:CDS
TGAAGGTAAAGTTGATAATC+TGG 0.429075 1.4:-53775528 MS.gene029877:CDS
GAATTATATGATTCTGAGAA+AGG 0.434177 1.4:-53777155 MS.gene029877:CDS
AGATCCTTGACCCTCTGTTA+TGG 0.436200 1.4:+53770171 None:intergenic
CTTCTTAATTATTTATCACT+TGG 0.436600 1.4:-53776945 MS.gene029877:CDS
ACGAATACGGAGGTAGCTTA+AGG 0.440357 1.4:+53770329 None:intergenic
AAGGTATAAAATTCCAAAGT+TGG 0.442534 1.4:+53775101 None:intergenic
CTTTAGAGATTCCAGAATTG+AGG 0.442539 1.4:-53774549 MS.gene029877:CDS
TTCACATTGACTGCTTGATC+GGG 0.443383 1.4:+53776184 None:intergenic
GAGGTGTGCCGGTCACGAAC+TGG 0.444457 1.4:+53770564 None:intergenic
CTGTTTCTGCTTTATGTCAA+AGG 0.448199 1.4:-53779781 MS.gene029877:CDS
ATGGACTCTTTCCTCGTCCA+TGG 0.448715 1.4:-53774968 MS.gene029877:CDS
AACTTGCAGGCTGAGGAAAC+AGG 0.448741 1.4:-53775005 MS.gene029877:CDS
AGGTCAAAAGCGTCCAGAAA+TGG 0.454675 1.4:-53780335 MS.gene029877:CDS
GAGTTACAGAAGTCTGGTTC+GGG 0.454806 1.4:-53775068 MS.gene029877:CDS
CCAGATCTCCTGCAGAAGCT+TGG 0.455365 1.4:-53777854 MS.gene029877:CDS
TTCTGATGATGTAGGAGATT+GGG 0.456429 1.4:+53777253 None:intergenic
ATTCACATTGACTGCTTGAT+CGG 0.456516 1.4:+53776183 None:intergenic
GAATGAACTTCTCCCTGGCC+TGG 0.457614 1.4:-53777933 MS.gene029877:CDS
TAAGGAACGGCACATCCATT+AGG 0.457643 1.4:+53776690 None:intergenic
TTGAGAGATGCCAATCCTCC+TGG 0.458208 1.4:+53770533 None:intergenic
TGCATGAAGAGAAGATCAAT+AGG 0.458937 1.4:-53777052 MS.gene029877:CDS
TTGCGGAGAGAACGATTCTT+GGG 0.458952 1.4:-53770911 MS.gene029877:CDS
AACAGCAAGTGACAGGCGAC+TGG 0.459357 1.4:-53775267 MS.gene029877:CDS
GAACTTGAGCGTATACTTTG+CGG 0.459853 1.4:-53770928 MS.gene029877:CDS
GGAGTTACAGAAGTCTGGTT+CGG 0.459957 1.4:-53775069 MS.gene029877:CDS
AGAAGAAGATTGCATAATAT+GGG 0.461055 1.4:+53779295 None:intergenic
TTACTTGTCAAACTTTCATC+GGG 0.461212 1.4:-53778852 MS.gene029877:CDS
ATCTTGCTTCAAAGCTGAAT+AGG 0.462435 1.4:+53775351 None:intergenic
CAGTAAGTTGACAGAGAAGC+TGG 0.464250 1.4:-53775456 MS.gene029877:CDS
GAAAATCTGAAGATGTTCAA+TGG 0.464292 1.4:+53770960 None:intergenic
ATTACTTGTCAAACTTTCAT+CGG 0.465159 1.4:-53778853 MS.gene029877:CDS
TAAGCATGGATTGATTCAAC+AGG 0.465195 1.4:-53779075 MS.gene029877:CDS
AGTGGACAAACTGAACCTTC+TGG 0.465257 1.4:-53780016 MS.gene029877:CDS
CTTCTGATGATGTAGGAGAT+TGG 0.465616 1.4:+53777252 None:intergenic
TTTCTTCTCAACAAGCATAC+AGG 0.466716 1.4:-53779538 MS.gene029877:intron
GATCCAGAGGTTGTCCTTCA+AGG 0.468009 1.4:+53775903 None:intergenic
TTGACTGCTTGATCGGGTCT+AGG 0.468019 1.4:+53776190 None:intergenic
TCCGAAGGCATTATGTCCTC+AGG 0.468713 1.4:+53775764 None:intergenic
GAAAGAGTCCATAAAGAGAA+TGG 0.468797 1.4:+53774979 None:intergenic
TGTGTTTCCCATGTTGATCC+AGG 0.470648 1.4:-53777825 MS.gene029877:intron
CCACTTGCTTGCTTACAGGC+AGG 0.472378 1.4:-53779591 MS.gene029877:CDS
CTATAAACTTATTCTTGGAA+AGG 0.474267 1.4:-53774814 MS.gene029877:intron
TATCCAGTGTCTTCAAGCAT+TGG 0.474555 1.4:-53779634 MS.gene029877:intron
CAAGCAGTCAATGTGAATGC+TGG 0.474799 1.4:-53776178 MS.gene029877:CDS
AAAATCTGAAGATGTTCAAT+GGG 0.474853 1.4:+53770961 None:intergenic
CAGAGACTATCGAGTGATCA+TGG 0.475475 1.4:-53780067 MS.gene029877:CDS
TGTCAGGAGTTACAGAAGTC+TGG 0.479773 1.4:-53775074 MS.gene029877:CDS
CGATGTAAGTTCAACACAAT+CGG 0.479828 1.4:-53780233 MS.gene029877:CDS
CTTGAAGTTATTTATAAAGG+AGG 0.480655 1.4:-53777423 MS.gene029877:CDS
GTCTCTGTCTATGATATTCG+TGG 0.483373 1.4:+53780083 None:intergenic
CAGGTGGAAGCCTTCAAATC+CGG 0.484304 1.4:-53774291 MS.gene029877:CDS
TCGGCTTCCTCCAGGAGGAT+TGG 0.487594 1.4:-53770543 MS.gene029877:CDS
AGAAACAGAATATCATAAGT+TGG 0.490252 1.4:+53775623 None:intergenic
GTTGATGCAACTGTCAAGTC+TGG 0.490324 1.4:-53774324 MS.gene029877:CDS
GATTCCTGATTAATATAGAA+AGG 0.490377 1.4:+53776796 None:intergenic
ACCTGAGGACATAATGCCTT+CGG 0.490897 1.4:-53775765 MS.gene029877:CDS
TGGAGGAAGCCGAGGTGTGC+CGG 0.491431 1.4:+53770553 None:intergenic
CAAGAGAATGAAGTCATGAT+AGG 0.494168 1.4:+53770143 None:intergenic
TAGGTAGGTCTGTGTCTGCT+TGG 0.494170 1.4:+53770374 None:intergenic
TCCGAATAATCAACTAGCAT+TGG 0.494261 1.4:-53777903 MS.gene029877:CDS
TGGTGTTAAGAGTGCCTCAA+TGG 0.495645 1.4:+53777388 None:intergenic
AAAAGTGTAACACAGGCACT+TGG 0.496525 1.4:+53777283 None:intergenic
ATTCCTGATTAATATAGAAA+GGG 0.497877 1.4:+53776797 None:intergenic
AAGATGCAAGTACTTCAAAC+TGG 0.497996 1.4:-53775333 MS.gene029877:CDS
TTTCTTCTTAAAAGCTTGGA+AGG 0.499941 1.4:-53775605 MS.gene029877:CDS
GGAAGTATCCATGTCATCAT+GGG 0.500695 1.4:+53780201 None:intergenic
GACTCTATGGCAGTCTGCGT+TGG 0.502622 1.4:-53775419 MS.gene029877:CDS
TTGAAGTTATTTATAAAGGA+GGG 0.503425 1.4:-53777422 MS.gene029877:CDS
ACAGCCTCCATGAAAGGTGT+GGG 0.503968 1.4:+53779319 None:intergenic
AAGCAGTCAATGTGAATGCT+GGG 0.505662 1.4:-53776177 MS.gene029877:CDS
AACTGAACCTTCTGGTCAGT+TGG 0.508583 1.4:-53780008 MS.gene029877:CDS
AGGAAGTATCCATGTCATCA+TGG 0.508828 1.4:+53780200 None:intergenic
GTATCAACGTCTCAGCTTGT+TGG 0.509233 1.4:-53778741 MS.gene029877:CDS
CCAGAGAAGGATTCAGCTGA+TGG 0.509910 1.4:-53780148 MS.gene029877:CDS
TGCAGTACCCTACCAAGCTC+AGG 0.510678 1.4:+53774653 None:intergenic
GGCACACCTCGGCTTCCTCC+AGG 0.511572 1.4:-53770551 MS.gene029877:CDS
AGAAGTCTGGTTCGGGCATG+TGG 0.511577 1.4:-53775061 MS.gene029877:CDS
CACTTGATCCTGAGCTTGGT+AGG 0.513265 1.4:-53774661 MS.gene029877:CDS
AGAGAAGATCAATAGGGTAC+TGG 0.515205 1.4:-53777045 MS.gene029877:CDS
TTCACAGAGTTCAGTGAGTA+CGG 0.516930 1.4:+53779985 None:intergenic
GAGGATGAGAAATTATCATC+TGG 0.518325 1.4:-53776522 MS.gene029877:CDS
GGAATGCTCGTCGTTGGCCA+TGG 0.520361 1.4:+53770588 None:intergenic
GACCAAATCTGGCATGCTTG+TGG 0.520594 1.4:-53777654 MS.gene029877:CDS
CATCCATCCCAAGCTTCTGC+AGG 0.522550 1.4:+53777846 None:intergenic
CTTCAAATCCGGCTTTAACC+AGG 0.522768 1.4:-53774280 MS.gene029877:intron
GCATATTAAAACAAAATACT+TGG 0.524480 1.4:-53777183 MS.gene029877:CDS
TTCAAGAACCACTTTATGAC+TGG 0.525002 1.4:+53775160 None:intergenic
TCGGATGAACTTTGTAAGCA+TGG 0.525137 1.4:-53779089 MS.gene029877:CDS
TGTATCCTTACATTGACAAT+GGG 0.526252 1.4:+53770720 None:intergenic
GATCTGTATCCTCGATCAGC+TGG 0.526965 1.4:-53779824 MS.gene029877:CDS
TATCACTTGGCCAATATATG+GGG 0.528827 1.4:-53776932 MS.gene029877:CDS
GGGGAAAACAAGGGGATGCA+TGG 0.529152 1.4:-53776912 MS.gene029877:CDS
TTGCTGAATGAACTTCTCCC+TGG 0.529652 1.4:-53777938 MS.gene029877:CDS
CTGTGAAGGAAATTCTGAGT+TGG 0.530317 1.4:-53774585 MS.gene029877:CDS
AGTGACAGGCGACTGGGCCA+TGG 0.530362 1.4:-53775260 MS.gene029877:CDS
AGAAGCTGGAGCAACAGATG+AGG 0.530960 1.4:-53775442 MS.gene029877:CDS
TTTGCAAGCTTTACAAGTAG+TGG 0.532154 1.4:+53779905 None:intergenic
CTGCACGCTCTCTTATCAGC+TGG 0.532896 1.4:+53780301 None:intergenic
TAGATAACAACATTATCTCT+GGG 0.534042 1.4:+53779870 None:intergenic
CACTTGCTTGCTTACAGGCA+GGG 0.535547 1.4:-53779590 MS.gene029877:CDS
AAAGTGTAACACAGGCACTT+GGG 0.538825 1.4:+53777284 None:intergenic
ATCTGGATGATTAGCTAGGA+AGG 0.539146 1.4:+53777871 None:intergenic
TCATAAAGTGGTTCTTGAAG+TGG 0.540987 1.4:-53775156 MS.gene029877:CDS
ATCTTCTTCTATATGAGGAT+CGG 0.543387 1.4:-53779282 MS.gene029877:CDS
GTATCAAGACGTAGCCGACC+AGG 0.543633 1.4:-53779744 MS.gene029877:intron
TTCTCATTCCTCAGAAATGT+CGG 0.543799 1.4:-53779108 MS.gene029877:CDS
ACTACATGCCAGTCATAAAG+TGG 0.544099 1.4:-53775168 MS.gene029877:CDS
GCTTTGTTGCTACAAGATGC+AGG 0.544451 1.4:+53775947 None:intergenic
ACAAAACGTACTTTCAGGCA+AGG 0.545702 1.4:+53776666 None:intergenic
TGTTGGTGGACACTGTAATC+GGG 0.545964 1.4:-53778724 MS.gene029877:intron
AAAGACAAACTTGCAGGCTG+AGG 0.546000 1.4:-53775012 MS.gene029877:CDS
GATTATCTCAGCTATCTGTA+AGG 0.546532 1.4:+53777469 None:intergenic
TCTTCTATATGAGGATCGGC+AGG 0.547401 1.4:-53779278 MS.gene029877:intron
CGTACTTTCAGGCAAGGGTA+AGG 0.547506 1.4:+53776672 None:intergenic
TTGTCAACACAAGATACATC+TGG 0.550545 1.4:-53774945 MS.gene029877:CDS
TAACAAGTCTGAAGTCATGC+TGG 0.550885 1.4:+53779931 None:intergenic
GAAGCTGGAGCAACAGATGA+GGG 0.553462 1.4:-53775441 MS.gene029877:CDS
CACAGCCTCCATGAAAGGTG+TGG 0.554075 1.4:+53779318 None:intergenic
TTATTGTGAGGTGGCATTCG+TGG 0.554265 1.4:+53775296 None:intergenic
ACTCTGAAACAGCAAGTGAC+AGG 0.555313 1.4:-53775274 MS.gene029877:CDS
GGAGATCTGGATGATTAGCT+AGG 0.556095 1.4:+53777867 None:intergenic
GCATTCCTCCAGTTCGTGAC+CGG 0.556754 1.4:-53770572 MS.gene029877:CDS
CTAAAGCACTTCAAGACGGA+AGG 0.557300 1.4:-53774866 MS.gene029877:CDS
GAATAGACATCCATGGCAAA+CGG 0.558982 1.4:+53777700 None:intergenic
TATGGACAAGCTTATTGGCA+AGG 0.559664 1.4:-53777015 MS.gene029877:CDS
GAAAGGTGTGGGGCTTTCTG+AGG 0.560626 1.4:+53779330 None:intergenic
GTGCAGCGGACTCCAAGATC+CGG 0.561984 1.4:+53775201 None:intergenic
ACTTGCTTGCTTACAGGCAG+GGG 0.563872 1.4:-53779589 MS.gene029877:CDS
GCAGAATCAGACTCAAAACT+AGG 0.564474 1.4:-53775980 MS.gene029877:CDS
CAAGTCTGGAATTTCAAGAC+AGG 0.565412 1.4:-53774310 MS.gene029877:CDS
GCATGAAGAGAAGATCAATA+GGG 0.565762 1.4:-53777051 MS.gene029877:CDS
TCAACGTCTCAGCTTGTTGG+TGG 0.566127 1.4:-53778738 MS.gene029877:CDS
AACTCATTTAGTTGGACAGA+AGG 0.567918 1.4:+53775485 None:intergenic
AACGACAGTTGAACGCCACT+AGG 0.569474 1.4:+53777341 None:intergenic
AGGGGTGTGTCGCCAGAGAG+AGG 0.571420 1.4:+53776816 None:intergenic
AAGTTCAACACAATCGGCAA+TGG 0.572318 1.4:-53780227 MS.gene029877:CDS
ATGTATCCTTACATTGACAA+TGG 0.572984 1.4:+53770719 None:intergenic
GTGAGAGACCTGGTTAAAGC+CGG 0.573287 1.4:+53774272 None:intergenic
GTCTGGAATTTCAAGACAGG+TGG 0.575671 1.4:-53774307 MS.gene029877:CDS
TAAGTGAAACATAATCCTCC+AGG 0.575930 1.4:+53774349 None:intergenic
TGTTTGGAATCGGTCTGTGA+AGG 0.576631 1.4:-53774599 MS.gene029877:CDS
ACTATTATATCAAGCTTGAG+TGG 0.577573 1.4:-53780034 MS.gene029877:CDS
TAAAACAAAATACTTGGCAC+CGG 0.578309 1.4:-53777177 MS.gene029877:CDS
ACTTGATCCTGAGCTTGGTA+GGG 0.579205 1.4:-53774660 MS.gene029877:CDS
GTTTCAGAGTTATTGTGAGG+TGG 0.579359 1.4:+53775287 None:intergenic
TTCAATTGCCATCAAATACA+AGG 0.580500 1.4:-53776467 MS.gene029877:CDS
AAGTGTAACACAGGCACTTG+GGG 0.583851 1.4:+53777285 None:intergenic
TTTCGGACAATAGTCAACTT+CGG 0.583993 1.4:+53770509 None:intergenic
CGATTGTGTTGAACTTACAT+CGG 0.584306 1.4:+53780234 None:intergenic
GCAAGTTTATCCGTTTGCCA+TGG 0.584844 1.4:-53777710 MS.gene029877:CDS
CCAGCAATCTCAGAACGTGC+AGG 0.586068 1.4:-53776426 MS.gene029877:CDS
ATGGGCACAGCCTCCATGAA+AGG 0.588680 1.4:+53779313 None:intergenic
GTTGGCCATGGTCAAACTCT+CGG 0.589724 1.4:+53770600 None:intergenic
CAGTCACTTGATCCTGAGCT+TGG 0.590188 1.4:-53774665 MS.gene029877:CDS
CAAAACGTACTTTCAGGCAA+GGG 0.590578 1.4:+53776667 None:intergenic
TATGATGAAGAAGTGGGCAC+TGG 0.590871 1.4:-53775131 MS.gene029877:CDS
AAGCAATTAATGGGAAGTAG+AGG 0.591066 1.4:-53780355 None:intergenic
ACAGCAAGTGACAGGCGACT+GGG 0.592230 1.4:-53775266 MS.gene029877:CDS
TCTGCATTTGACCTCTCACA+TGG 0.593150 1.4:-53778765 MS.gene029877:CDS
AAAGGTGTGGGGCTTTCTGA+GGG 0.593542 1.4:+53779331 None:intergenic
GAGAATGAAGTCATGATAGG+TGG 0.593766 1.4:+53770146 None:intergenic
ACTGAGGCGGTAGAAGAACT+AGG 0.594306 1.4:+53780262 None:intergenic
ACTGGAGGAATGCTCGTCGT+TGG 0.594696 1.4:+53770582 None:intergenic
TGTCGTTAGACTCTGGTCAA+AGG 0.595438 1.4:-53777325 MS.gene029877:CDS
GTTCAACTGTCGTTAGACTC+TGG 0.597960 1.4:-53777332 MS.gene029877:CDS
GTCTGCTTCAAGCCATTCAG+AGG 0.598638 1.4:-53780176 MS.gene029877:CDS
TAACTCATACAAAGTCCTGA+AGG 0.598862 1.4:+53778818 None:intergenic
AATGCTAAAACTTTATCATG+AGG 0.600450 1.4:+53775716 None:intergenic
AATAACTGATTACACCAGAA+AGG 0.600465 1.4:+53775389 None:intergenic
TCTCCTGCAGAAGCTTGGGA+TGG 0.601685 1.4:-53777849 MS.gene029877:CDS
TGTGTTGACAACCATGGACG+AGG 0.605284 1.4:+53774957 None:intergenic
CTCTTGTATGCCATAACAGA+GGG 0.605670 1.4:-53770181 MS.gene029877:CDS
GACTGCTAGCTGTGTAACCA+TGG 0.608389 1.4:+53770745 None:intergenic
GCTTCAAAGCTGAATAGGAA+AGG 0.609600 1.4:+53775356 None:intergenic
TAGTTTCATCATTTGTGCAG+CGG 0.609816 1.4:+53775187 None:intergenic
TTCAGAGGAAGAGCCAGAGA+AGG 0.609977 1.4:-53780161 MS.gene029877:CDS
TCAAAATTGGTGTACCCTAG+TGG 0.610121 1.4:-53777356 MS.gene029877:CDS
AGAACAGTATCAGGATACCC+AGG 0.611242 1.4:+53774503 None:intergenic
TTAACTAACCTGGATCAACA+TGG 0.611270 1.4:+53777817 None:intergenic
TGGTTCGGGCATGTGGAGAG+AGG 0.612565 1.4:-53775054 MS.gene029877:CDS
TGCTGGAACTTCATCTACAC+AGG 0.614672 1.4:+53776443 None:intergenic
GAAGTTGACTATTGTCCGAA+AGG 0.615155 1.4:-53770507 MS.gene029877:intron
AAGTTCATCCGACATTTCTG+AGG 0.615184 1.4:+53779100 None:intergenic
TAACTAACCTGGATCAACAT+GGG 0.616198 1.4:+53777818 None:intergenic
GTAGGTAAATATGAGAAACC+TGG 0.620092 1.4:-53774367 MS.gene029877:intron
TCAAAGGTCTGCTTCTAGAG+AGG 0.621716 1.4:-53777309 MS.gene029877:CDS
AGTACGGCCAACTGACCAGA+AGG 0.621879 1.4:+53780001 None:intergenic
ATCCTTACATTGACAATGGG+AGG 0.622117 1.4:+53770723 None:intergenic
AATCCTCCTGGAGGAAGCCG+AGG 0.623954 1.4:+53770545 None:intergenic
AGAGTCAATTTAGGATCCAG+AGG 0.625003 1.4:+53775890 None:intergenic
TGAAAGATATCTATGGCCAA+AGG 0.627351 1.4:-53776562 MS.gene029877:CDS
TGAATGGCTTGAAGCAGACG+AGG 0.628567 1.4:+53780180 None:intergenic
ATCACTTGGCCAATATATGG+GGG 0.630224 1.4:-53776931 MS.gene029877:CDS
GGAAATTCTGAGTTGGAACA+GGG 0.632000 1.4:-53774578 MS.gene029877:CDS
ACGACAGTTGAACGCCACTA+GGG 0.633007 1.4:+53777342 None:intergenic
TTGCTTGAGTGACTGTGCTG+AGG 0.633950 1.4:-53776625 MS.gene029877:CDS
TTTGATGGCAATTGAAGCGG+TGG 0.634055 1.4:+53776474 None:intergenic
ACTTACATCGGTTTGAACTG+AGG 0.634578 1.4:+53780246 None:intergenic
TTCCTGATTAATATAGAAAG+GGG 0.636899 1.4:+53776798 None:intergenic
CGGACTCCAAGATCCGGTCG+CGG 0.637555 1.4:+53775207 None:intergenic
GTTGCTAAAGCACTTCAAGA+CGG 0.639670 1.4:-53774870 MS.gene029877:CDS
GTATTTGATGGCAATTGAAG+CGG 0.640188 1.4:+53776471 None:intergenic
GTGTGCCGGTCACGAACTGG+AGG 0.640971 1.4:+53770567 None:intergenic
GACAGATCTATGTGAAACAC+AGG 0.642506 1.4:-53776397 MS.gene029877:intron
AACGGCACATCCATTAGGAA+CGG 0.644121 1.4:+53776695 None:intergenic
AGTGGAATATGATGAAGAAG+TGG 0.644187 1.4:-53775138 MS.gene029877:CDS
CAGCCTCCATGAAAGGTGTG+GGG 0.644954 1.4:+53779320 None:intergenic
TAAAGCACTTCAAGACGGAA+GGG 0.648126 1.4:-53774865 MS.gene029877:CDS
TATGCCATAACAGAGGGTCA+AGG 0.648375 1.4:-53770175 MS.gene029877:CDS
ACATGACGAATAGACATCCA+TGG 0.650937 1.4:+53777693 None:intergenic
TTTGCACAAGTCATCACACT+AGG 0.653690 1.4:+53770355 None:intergenic
TTGAGCATGTCGACTGACGC+AGG 0.655636 1.4:-53777086 MS.gene029877:CDS
TTAATTGGGATAGAGTCGCT+CGG 0.655783 1.4:+53779027 None:intergenic
ACACCTCGGCTTCCTCCAGG+AGG 0.656878 1.4:-53770548 MS.gene029877:CDS
ATTATCCGAGAGTTTGACCA+TGG 0.657833 1.4:-53770605 MS.gene029877:CDS
GGAAGTACCAATTACCTGGT+CGG 0.658490 1.4:+53779730 None:intergenic
GATCACATTAAGTTCGACCA+TGG 0.659611 1.4:-53770762 MS.gene029877:CDS
CTGTAACTCCTGACACACCA+AGG 0.659651 1.4:+53775082 None:intergenic
GCTGTTTCAGAGTTATTGTG+AGG 0.659702 1.4:+53775284 None:intergenic
TACATCGGTTTGAACTGAGG+CGG 0.660125 1.4:+53780249 None:intergenic
GATGAAGAATGACAATCCGA+AGG 0.664348 1.4:+53775749 None:intergenic
CGGAGAGAACGATTCTTGGG+CGG 0.665814 1.4:-53770908 MS.gene029877:intron
CCTGCCTGTAAGCAAGCAAG+TGG 0.667610 1.4:+53779591 None:intergenic
AATGGAGCCCCATGATGACA+TGG 0.667701 1.4:-53780209 MS.gene029877:CDS
GCGAGTGGCTCTTTCTACTG+TGG 0.668144 1.4:-53779374 MS.gene029877:CDS
ACGTTGATACACCATGTGAG+AGG 0.674768 1.4:+53778754 None:intergenic
ACAAGAAAACCAGCTGATCG+AGG 0.674778 1.4:+53779815 None:intergenic
GTGGTGTTAGTGCAAAATTG+TGG 0.675315 1.4:-53775826 MS.gene029877:CDS
CACAAGTCATCACACTAGGT+AGG 0.681659 1.4:+53770359 None:intergenic
GAAGTATCCATGTCATCATG+GGG 0.681660 1.4:+53780202 None:intergenic
GCTCTTGTATGCCATAACAG+AGG 0.682277 1.4:-53770182 MS.gene029877:CDS
AGCAGTCAATGTGAATGCTG+GGG 0.683168 1.4:-53776176 MS.gene029877:CDS
TCTTTCGAGGCAATGCACCA+TGG 0.683196 1.4:+53775243 None:intergenic
GTGGAATATGATGAAGAAGT+GGG 0.686774 1.4:-53775137 MS.gene029877:CDS
TTTCAGGCAAGGGTAAGGAA+CGG 0.690592 1.4:+53776677 None:intergenic
ATAGTAAAACAAAATGACAG+TGG 0.691364 1.4:-53775845 MS.gene029877:CDS
GGTAAATATGAGAAACCTGG+AGG 0.695517 1.4:-53774364 MS.gene029877:CDS
AGTTCGTGACCGGCACACCT+CGG 0.697122 1.4:-53770562 MS.gene029877:CDS
TAGAGCAGCTGTGAAACCTG+AGG 0.698518 1.4:-53775780 MS.gene029877:CDS
AGAGATGCCAATCCTCCTGG+AGG 0.712039 1.4:+53770536 None:intergenic
GTATCTTGTGTTGACAACCA+TGG 0.715781 1.4:+53774951 None:intergenic
TTCAGGGTCTGATCACACCA+TGG 0.719758 1.4:-53774477 MS.gene029877:intron
TCAACACAAGATACATCTGG+TGG 0.725886 1.4:-53774942 MS.gene029877:CDS
AAGCCCCACACCTTTCATGG+AGG 0.732117 1.4:-53779323 MS.gene029877:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr1.4 gene 53770156 53780368 53770156 ID=MS.gene029877
chr1.4 mRNA 53770156 53780368 53770156 ID=MS.gene029877.t1;Parent=MS.gene029877
chr1.4 exon 53779745 53780368 53779745 ID=MS.gene029877.t1.exon1;Parent=MS.gene029877.t1
chr1.4 CDS 53779745 53780368 53779745 ID=cds.MS.gene029877.t1;Parent=MS.gene029877.t1
chr1.4 exon 53779539 53779649 53779539 ID=MS.gene029877.t1.exon2;Parent=MS.gene029877.t1
chr1.4 CDS 53779539 53779649 53779539 ID=cds.MS.gene029877.t1;Parent=MS.gene029877.t1
chr1.4 exon 53779279 53779395 53779279 ID=MS.gene029877.t1.exon3;Parent=MS.gene029877.t1
chr1.4 CDS 53779279 53779395 53779279 ID=cds.MS.gene029877.t1;Parent=MS.gene029877.t1
chr1.4 exon 53779019 53779177 53779019 ID=MS.gene029877.t1.exon4;Parent=MS.gene029877.t1
chr1.4 CDS 53779019 53779177 53779019 ID=cds.MS.gene029877.t1;Parent=MS.gene029877.t1
chr1.4 exon 53778725 53778886 53778725 ID=MS.gene029877.t1.exon5;Parent=MS.gene029877.t1
chr1.4 CDS 53778725 53778886 53778725 ID=cds.MS.gene029877.t1;Parent=MS.gene029877.t1
chr1.4 exon 53777826 53777978 53777826 ID=MS.gene029877.t1.exon6;Parent=MS.gene029877.t1
chr1.4 CDS 53777826 53777978 53777826 ID=cds.MS.gene029877.t1;Parent=MS.gene029877.t1
chr1.4 exon 53777626 53777747 53777626 ID=MS.gene029877.t1.exon7;Parent=MS.gene029877.t1
chr1.4 CDS 53777626 53777747 53777626 ID=cds.MS.gene029877.t1;Parent=MS.gene029877.t1
chr1.4 exon 53776398 53777541 53776398 ID=MS.gene029877.t1.exon8;Parent=MS.gene029877.t1
chr1.4 CDS 53776398 53777541 53776398 ID=cds.MS.gene029877.t1;Parent=MS.gene029877.t1
chr1.4 exon 53776153 53776236 53776153 ID=MS.gene029877.t1.exon9;Parent=MS.gene029877.t1
chr1.4 CDS 53776153 53776236 53776153 ID=cds.MS.gene029877.t1;Parent=MS.gene029877.t1
chr1.4 exon 53774815 53776029 53774815 ID=MS.gene029877.t1.exon10;Parent=MS.gene029877.t1
chr1.4 CDS 53774815 53776029 53774815 ID=cds.MS.gene029877.t1;Parent=MS.gene029877.t1
chr1.4 exon 53774478 53774708 53774478 ID=MS.gene029877.t1.exon11;Parent=MS.gene029877.t1
chr1.4 CDS 53774478 53774708 53774478 ID=cds.MS.gene029877.t1;Parent=MS.gene029877.t1
chr1.4 exon 53774281 53774385 53774281 ID=MS.gene029877.t1.exon12;Parent=MS.gene029877.t1
chr1.4 CDS 53774281 53774385 53774281 ID=cds.MS.gene029877.t1;Parent=MS.gene029877.t1
chr1.4 exon 53770909 53770989 53770909 ID=MS.gene029877.t1.exon13;Parent=MS.gene029877.t1
chr1.4 CDS 53770909 53770989 53770909 ID=cds.MS.gene029877.t1;Parent=MS.gene029877.t1
chr1.4 exon 53770731 53770799 53770731 ID=MS.gene029877.t1.exon14;Parent=MS.gene029877.t1
chr1.4 CDS 53770731 53770799 53770731 ID=cds.MS.gene029877.t1;Parent=MS.gene029877.t1
chr1.4 exon 53770508 53770636 53770508 ID=MS.gene029877.t1.exon15;Parent=MS.gene029877.t1
chr1.4 CDS 53770508 53770636 53770508 ID=cds.MS.gene029877.t1;Parent=MS.gene029877.t1
chr1.4 exon 53770324 53770407 53770324 ID=MS.gene029877.t1.exon16;Parent=MS.gene029877.t1
chr1.4 CDS 53770324 53770407 53770324 ID=cds.MS.gene029877.t1;Parent=MS.gene029877.t1
chr1.4 exon 53770156 53770221 53770156 ID=MS.gene029877.t1.exon17;Parent=MS.gene029877.t1
chr1.4 CDS 53770156 53770221 53770156 ID=cds.MS.gene029877.t1;Parent=MS.gene029877.t1
Gene Sequence

>MS.gene029877

ATGGGAAGTAGAGGTCAAAAGCGTCCAGAAATGGTAGATGAACTGCCAGCTGATAAGAGAGCGTGCAGTTCGTTAGATTTTAGACCTAGTTCTTCTACCGCCTCAGTTCAAACCGATGTAAGTTCAACACAATCGGCAATGGAGCCCCATGATGACATGGATACTTCCTCGTCTGCTTCAAGCCATTCAGAGGAAGAGCCAGAGAAGGATTCAGCTGATGGATCATGTGATTCAGATGAATTGGAGCACTATCATAGCACTCTCCACGAATATCATAGACAGAGACTATCGAGTGATCATGGAAAATTTAAAACTATTATATCAAGCTTGAGTGGACAAACTGAACCTTCTGGTCAGTTGGCCGTACTCACTGAACTCTGTGAAGTTCTGTCATTTTGTACAGAGGGTTCAATCTCCAGCATGACTTCAGACTTGTTATCACCACTACTTGTAAAGCTTGCAAAACATGAGAGTAACCCAGAGATAATGTTGTTATCTATAAGGGCTATCACTTATATATGTGATCTGTATCCTCGATCAGCTGGTTTTCTTGTTCGTCATGATGCTGTTTCTGCTTTATGTCAAAGGTTACTAACTATTGAGTATCAAGACGTAGCCGACCAGGTAATTGGTACTTCCTTGTTTGTAAGATATGTTTTTCATTTTCTTTTGTTGCTTTTTTTTATAGTTTGTAAGTTGTAGCTATTGTTTTTATCCAGTGTCTTCAAGCATTGGAGAAAATATCGAGAGAACAACCACTTGCTTGCTTACAGGCAGGGGCAATTATGGCTGTTCTGAATTATATTGATTTCTTCTCAACAAGCATACAGGTAAGCATCTAATACAAAGGCATCGTCTTCATAAGTATTGACAGTTCATTTTTGGTTCAAAAATTTGAAATAAAAAATATTTTAAATCATTAGATTGGAGAATAGTTTTCTCATTTTACTAATGTATCTTTTCCCTCTCACAGCGAGTGGCTCTTTCTACTGTGGTCAACATATGCAAGAAGCTTCCCTCAGAAAGCCCCACACCTTTCATGGAGGCTGTGCCCATATTATGCAATCTTCTTCTATATGAGGATCGGCAGGTACCGATGATTGGACTGTAGATATTACACTTATGTATTTGTTGTGGGTTTGATTTCCTTTTTTTTGTATTCTTTACTTAAGTGCAAATGTATTTCCACAGCTTGTCGAAAACGTTGCTACCTGCTTAATCAAAATTGTTGATCGAGTTTCTCATTCCTCAGAAATGTCGGATGAACTTTGTAAGCATGGATTGATTCAACAGGTCACACATCTCTTAAGTGTAAATGGCCGAGCGACTCTATCCCAATTAATTTATAATGTAAGCAATTTTTTATATGCTATTTTCATATCCTATATTTCTCCTTTTTTATTTTTTATTTTTTTATTTTTTTTTATGTGCATGAACTTTGATGTTGTTATGAAATTATGAATCTATTATTTTGCTTGACAGGGTTTGATAGGATTACTTGTCAAACTTTCATCGGGATCAGTCGTAGCCTTCAGGACTTTGTATGAGTTAAATATAAGCATCACATTGAGAGATATATTGTCTGCATTTGACCTCTCACATGGTGTATCAACGTCTCAGCTTGTTGGTGGACACTGTAATCGGGTACGAAGCTTGGATTTGTTTCTGTTTTTGTCTTGTACTGGTGTGCAGCTATAGGGTTTGATAAGTTTCCTGTTTACGAGTTGGATTATATCGCTATAGTCATTTAGTTGTTGTAACTAGTTCAGTAATTGGCAATTTTTTAATATTGATTGTGATAATAATGCAAGACTATAGTTAAATGTTCATTTGTGAGTATCCCCATGTAGCCCCTAAAAGTATCCTTCATGTACACATTAACAGTAACTTGGTACTTTAAAACTCTCGTCATGATAGAGTATAGGGAGGGGTCTGATTCATTTTGAGTCTGTTGTAGGAAATCTTACCTTACTTTTTTTAAGAAGTTGATTCACACTTACTTTTTTGAAGTTGATTCACAACTCGAACATGGACTTCCTAGTCACATTGCAGTAAGAAAGAAATTTATGATAAAGAGAAATTTAGGTCTGATTGTCATTGGATATCTGAATTTTAGGAAATTTATGAAGTCTTTATGGTTCAGTGAAAAATGTATCTAGAAGGCTGCAATAAGGCACGTTGAAATATAATTCTTGTTTAATACAAGTGGTGGATTGCTTTATTCTGTTTCAAAATTATACCATTCAATTCTTTTTGAGTGTCTTTATCTAGCAGTGTCAGTCTGAAACCAGGCAAGGTTTTTCTTGTAATTGATTCTTGTTTGTGTGTTTTGTAAGATTTCTTGTATTGAGCAGTGTAAAAGGTTTTCTTATTGTTTGTTGACCTTCTAGGTATATGAAGTACTCAAATTGCTGAATGAACTTCTCCCTGGCCTGGAAAAAGATCCGAATAATCAACTAGCATTGGACAAAGAATCCTTCCTAGCTAATCATCCAGATCTCCTGCAGAAGCTTGGGATGGATGTGTTTCCCATGTTGATCCAGGTTAGTTAATTTTCTTCTAGTTAGCTCAATACTCTACCTTTTTTACTACAATTAAATACCTATCTCATCTTTGCACAGGTGTTTAATTCTGGTGCAAGTTTATCCGTTTGCCATGGATGTCTATTCGTCATGTACAAGTTTGTTTGTTTGACCAAATCTGGCATGCTTGTGGAGCTTCTTAAGAACGCCAATATTTCAAGGTGAAACGGGCTTTCTTATCCTTGGAGTTGCTATATTATTTATATTTTGTTTAAGGTATTGACTTTATCTGGTTAATGTGACAGTTTTTTGGCTGGAGTTTTCACTCGGAAGGATCATCATATGCTAATGTTAGCCTTACAGATAGCTGAGATAATCCTTCAAAATTTTTCTGATATTTTCTTGAAGTTATTTATAAAGGAGGGTGTCTTTTTTGCCATTGAGGCACTCTTAACACCAGAAAGATCATCAAAATTGGTGTACCCTAGTGGCGTTCAACTGTCGTTAGACTCTGGTCAAAGGTCTGCTTCTAGAGAGGTCCCCAAGTGCCTGTGTTACACTTTTTCAACTGCCCAATCTCCTACATCATCAGAAGCCAAAAAGTGCAAACTTGACAAAGACTCTGTTCATAACCTTGCAGAGCATATTAAAACAAAATACTTGGCACCGGAATTATATGATTCTGAGAAAGGATTGACTGATATTTTGAAGAATCTCAGAGCACTGTCTAATGATTTGTTGAGCATGTCGACTGACGCAGGTGCTCTTGCTGTGCATGAAGAGAAGATCAATAGGGTACTGGATCAAATTATGGACAAGCTTATTGGCAAGGAAGAAGTTTCTACTTTTGAATTTATTGAGAGTGGAGTTGCAAAAGCACTTCTTAATTATTTATCACTTGGCCAATATATGGGGGAAAACAAGGGGATGCATGGTGTTTTTGGTCATAATGCTGTGATAGAAAAACGATTTGAGGCTTTAGCTAGTATATGCTTACGTACTTTTCAGCCTCTCTCTGGCGACACACCCCTTTCTATATTAATCAGGAATCTGCTGAGCGCACTGACTTCATTGGAAGCTTTTCCTATTATTCTGAGCAACGTACAAAAAATGAGAAATTCGTTTGCTACCGTTCCTAATGGATGTGCCGTTCCTTACCCTTGCCTGAAAGTACGTTTTGTTAAGGAGGAGAAAGAAACTTGCTTGAGTGACTGTGCTGAGGATTTTTTTACTGTCGACCCTTTTTCTTCTTTGCACTCAATTGAAAGATATCTATGGCCAAAGGTCAGCGTAAAAAGTGCAGAGGATGAGAAATTATCATCTGGTCAAGTAGTGTTGCAACCTGAAAGTCCACCGCTTCAATTGCCATCAAATACAAGGTCCTGTGTAGATGAAGTTCCAGCAATCTCAGAACGTGCAGGCATGTCGACAGATCTATGTGAAACACAGGTAATATTTGTAACCACAGTCAGTGGTTTACTGAAGTGGCAGCCTATTTATGCATTTCCCCCTAGTAAATTTATCTTGTTCTTAGGGAATGAGGGGTTGTTTCTTAAATTAGTGTTTTGTTTTTAAAAAAATGAAGAATTTCAACTATACTGGTTCTGCAGGGGGAAGAGCCAAAGACATCACATCCTAGACCCGATCAAGCAGTCAATGTGAATGCTGGGGAATCATCTTCTTCAGGAATTCAGGTTTTAATCTTGTTACTGGTTAGGTTATAATGAAGAACATTGTTGCATGTTATTTGTGTCAAAGTATGTTTATAGTTATGTTACACTTGCATATATTTAAATTTTTTGTGTCTTATCTAACAGATTGCAGAACAAGAAATGCATTTTGTTGCAGAATCAGACTCAAAACTAGGAAAAGAGCATCCTGCATCTTGTAGCAACAAAGCTGCTGATAAACTTATTTTTTACCTTGAAGGACAACCTCTGGATCCTAAATTGACTCTATATCAGGCAATTCTTGGCCAAATAGTAAAACAAAATGACAGTGGTGTTAGTGCAAAATTGTGGAGTCATGTGCATACATTAACCTATAGAGCAGCTGTGAAACCTGAGGACATAATGCCTTCGGATTGTCATTCTTCATCTCAAGATTTTCCTCATGATAAAGTTTTAGCATTATATCAGCGGACACCTTTTTTATCAGACATGTTCTATAGTGAACTTGTTTCTGATTTGGAGAAGTCAAGTCCAACTTATGATATTCTGTTTCTTCTTAAAAGCTTGGAAGGCATGAACAGATTTATTTTTCATCTCATGTCACGCGAAAGAATGTGTGCTTTTGCTGAAGGTAAAGTTGATAATCTGGATAGCCTAAAAATAACAGTTCCTTCTGTCCAACTAAATGAGTTCGTGAGCAGTAAGTTGACAGAGAAGCTGGAGCAACAGATGAGGGACTCTATGGCAGTCTGCGTTGGCAGTATGCCTTTCTGGTGTAATCAGTTATTGGCTTCTTGTCCTTTCCTATTCAGCTTTGAAGCAAGATGCAAGTACTTCAAACTGGCAGCATTTGGTCAGCCACGAATGCCACCTCACAATAACTCTGAAACAGCAAGTGACAGGCGACTGGGCCATGGTGCATTGCCTCGAAAGAAGTTTTTAGTTTACCGCGACCGGATCTTGGAGTCCGCTGCACAAATGATGAAACTACATGCCAGTCATAAAGTGGTTCTTGAAGTGGAATATGATGAAGAAGTGGGCACTGGTCTTGGACCAACTTTGGAATTTTATACCTTGGTGTGTCAGGAGTTACAGAAGTCTGGTTCGGGCATGTGGAGAGAGGATGCTTCTTCATATACCATAAAGACAAACTTGCAGGCTGAGGAAACAGGAATCCATTCTCTTTATGGACTCTTTCCTCGTCCATGGTTGTCAACACAAGATACATCTGGTGGCATACAGTTCTCTGAAGTAACAAATAAATTTTTCCTTTTAGGTCAAGTTGTTGCTAAAGCACTTCAAGACGGAAGGGTCTTAGATCTCCACTTTTCTAAAGCCTTCTATAAACTTATTCTTGGAAAGGTAATTGATTTTGGGTGCAATTAATGAAACTTCATACGAGCTTGCAACTTGTAGTAAGATGGAAACTGACTTAACCTTTCTATTTGCTTATAACTTGTCTTTTTAGGAACTTTATCTTTACGACATACAGTCACTTGATCCTGAGCTTGGTAGGGTACTGCATGAGTTTCAAGCACTAGTTAACAGGAAATTTTGTTTGGAATCGGTCTGTGAAGGAAATTCTGAGTTGGAACAGGGACTAAGCTTTAGAGATTCCAGAATTGAGGATCTTTGTCTTGATTTTACTCTTCCTGGGTATCCTGATACTGTTCTTGCTTCAGGGTCTGATCACACCATGGTAAAATATTGCTTGATATTTTTGCTTTGCAATTTTTGTTCTAACCCTTTTGTTGTTGGAATATAAACTTAATATTTCATCCTGTTTGGTAGGTAAATATGAGAAACCTGGAGGATTATGTTTCACTTATTGTTGATGCAACTGTCAAGTCTGGAATTTCAAGACAGGTGGAAGCCTTCAAATCCGGCTTTAACCAGGTCTCTCACTTTGTCTTGATAATAGTTGGAATATGATAGAAACTGATATCAAAATATAAACTAATAGTAATTGTACAATATAATCCCAAGAAATTCGAGAGTCTTGGTTCTCTCCCCTCCAAGAATTCGAGAGCTTGGTCTCTCCCTACCTATCCTTTATCCCAATCCCTGAATGCCTTTCTTTTCCTCTGCATCTTATTTATAATACTAAGTCCTATAGCTGTTACATAGAAGTCTAGTAGACAGCAATTACTGCAGACAAGTAACAGTTACTTATTTATAATATTATTAAATAAACCACTAGTATCTATAACTTCTGCCCTTAGGAGTCCTATTACTAACAATACTCCCCCCCTAAAGACTCACCTTGTCCTCAAGGTGAAGGATAACATAACTGTCCACCAGGGTCCCATAACTTGAAGTAGAGTGACAGAGCAAGGTGTGAAACATGATAATTAATGCATGCATCAGACACTCTCTTTTGGGGAGGAATTTTCGGCAGCAATAGGCATAGTGCCAGTTCGATCAAACCAGAGGATAATCCACTCTTCACCACAAACACATCTGGATCTGGCGGCTTTGGCAACGGTGGAGGTAGGCCGCCAAACTCGAGTGAAACCCATCCCTCTCCGATAATTTTTCTAGGCAATTTCGCCCTCGATTCGAACACACTACTCATACCATGTTCATAAAAGAGTCTGTCGATACCAAGAAATTTGCACAGATCTGTTTTGGTCTCTTGTTGCTTTTCCACAATGATGACATTCATGGAGGAATTTTCTGCATCCATTTCTTCTGCATTCTCTACCTTTTCCTCTTCTGCTGTCTGAATGAGTTCAGAATTTCCTTGATCAGTTTCTTCTGATTGAAGGCTGAATGTGTGAGGCGTCGACGACTCCCATTCCAATCCAGATTCCTCTTCTTCATCCGATATAGGTAGAAGGTCTCTATACTCTGGCTTAAAATGCCAAATGAATGCAACGTGAAACGCTCGCCAACTCGCATGTGGATGGCATCGACTCCACCACTGCCACCATACGAGAGCACGGTTTCGCAAGGCTTTCACCGCCTCCAGCAACTTCTCACCCTCCTGTGTTCCCACGACATCAAAATGTTTCTCAATACAAATCAACCACCAATAAGCGTCACCGCTGCCGTCAAATTGTGGCATGTCCATTTCCCCCCTACTGTGAATTTCTTTCCCTGGATCAGAACTGCTCTGATACCAGTGATAGAAACTGATATCAAAATATAAACTAATAGTAATTGTACAATATAATCCCAAGAAATTCGAGAGTCTTGGTTCTCTCCCCTCCAAGAATTCGAGAGCTTGGTCTCTCCCTACCTATCCTTTATCCCAATCCCTGAATGCCTTTCTTTTCCTCTGCATCTTATTTATAATACTAAGTCCTATAGCTGTTACATAGAAGTCTAGTAGACAGCAATTACTGCAGACAAGTAACAGTTACTTATTTATAATATTATTAAATAAACCACTAGTATCTATAACTTCTGCCCTTAGGAGTCCTATTACTAACAGAATATTTTAACCATAACCTTTTTGGTTGTGTTATATTCACTGTCACTATAGAAGTTGAAGAGAATTGCATCTCACGAGAATAAAAAAGCCCCAAAAGTTGGGGTTTACATAATACATGATGAAAAAAAAAAAATGAATATGGGCTTGAAACTAATTTCTATATATAAGAAGCTTTTTCAATCAATTGCATGGTCTGAAGGGCCACATCACATGAGGTCATGTGTTCAATTTGTGAACTAAATAAGTTTATAGAGAATATTAATTTAAGGGATTGTTTCATTCAAGGAAAAGTGTTCTGTTAAATTTCTTACTTTAACTAAGAATTACAAAAGTGCCGCTCAACTTCCAACCTTGTTTTCCTTTGTTCTCTGTGTATGCAATGTTTTATACAGAAAACATTGAAAATAAATTGTTATTTTCATTATTGCTTGTATTAATACTTTAAAACAAATAATAAAGTGAAAACAAAATGAACGCTTTTGCAATTATTAATGAAAACAGAAATGAAAAATATCTTCTCAAACCGAACAGTTACTTTGTTTGGGAGTTTGGAGGGGAGGGGAGGGAGGGTTTTGGAAAAAAGGAAGGTGCGAGTGGAAGAAATAGAAGACATTGGGAGGAGAGGGCTATGGAGGTTCACAATACAAAATCCCCCTTGTTTGGGGGAACTAAAAAATTGTATTGGGGGTTTTTTGGAGGGTTCTATGTTGTGATAATACTCTTAAAATCTAAAATATATTAAATCAATAAACATTAGTTTATTATTCTCTAAAAAAATGTTCTTTCAAAAAAAGCCCTCCCTTCCCCTCCCCTTCAAACTCCCAAACAAAGCCTTAAAATCTCAACAAGTTTCAGAGCCGGATCGGAAAGAAAGAAAATAGAAGCATTATTGGAAGAAAAAAAAATTCATTTAATAAGAAGTTAGTTGATTATTTTAGGGAAATGCTAACTTGTTAAAAAGCTAAAGATGGAATTATTTTCTTGGAAATTGTGTATTTAATGTTGTATAGTTTTAAACATTTATATTTTCAAAACAAAATTTATTTCTTATTTCCTTTTTTAGTTCCTTAACTTGTGCCCTTAGGGCATAAGTTAGTATGAGCCATTATTTTATGATCATTTTGAAATACCGTGCAGTAATAAAGCCTTACTGGTACACTGGTATTTAATTTTCTTTGTTTGGCAGTTATGCTCCAGCCTAACATTTGTTTCTTTTACTTTTTTGTCATGAAAAGGTTAATTATTTTCTGTAACCTTTTTTGTCATTTTCGTCCACTAGAATAATTTGACTTAATAGAAGGATAAAAATCCACAAGTCCTAGTTACATCTTACCGTTATCTGTGCTGTCTGGTGTTGTTTGGGTTTTTTTCATTCTGTGGTCTTATTTATAATTTGGGATCTGCAATCAGCTGTTATGGTTTTTAGGACCATTACCGGTTTTATAATTTCTGCCTATGTTCCTAGGGTCATTACACACAGGTGTTAAAGTTTATTGCTTATCTTTGTGCTCTTGTTTTCATTACGCTTTTAAATGCTAAAATATGTTGATAGTTAGAACTGGGATCCTGCACTGGTACTTGGGGAAAAATGGGATATGCGAGAAGTTTGTTTAATATACTGTCAGAACTAGGTTTTGTGTCTTGACTGCCGAAGTCATTTCTTATTTATATATATATGACCTGCTCATGAATTTCTTATCTATCTTCGTTGGGATTCTCATTATATATATTTTTTTTTTTAAAACTTGCAGGTTTTTCCCATTGAACATCTTCAGATTTTCTACGAAGAAGAACTTGAGCGTATACTTTGCGGAGAGAACGATTCTTGGGCGGTATGTATAATTTATTTTAATCAATTTGTATATATGTCCTTTTCTATTAGAGCGGGATGAAACTTTTTGTTTAAAAAAAGGTTTGATTATAGTAATGCCTTGTTAGCAGATCAATGAGCTCGCAGATCACATTAAGTTCGACCATGGTTACACAGCTAGCAGTCCTCCCATTGTCAATGTAAGGATACATGTAGTTTTAGATATTGTTTTGATCTTATGTTCGGAATCCTTTTTTTTTTTTTTGGACTGAATTTCTGTCATCAACAACTCAGTTGTTGGAAATTATCCGAGAGTTTGACCATGGCCAACGACGAGCATTCCTCCAGTTCGTGACCGGCACACCTCGGCTTCCTCCAGGAGGATTGGCATCTCTCAATCCGAAGTTGACTATTGTCCGAAAGGTGTACAGATTTTACTGATACACTCTATTTTTCACCATGTTTTTTACACGTAACATGTCCTTTTTCTTTGTAACATCTTATATTCTTGTGTGTTCAACAGCATTGTAGCAACCAAGCAGACACAGACCTACCTAGTGTGATGACTTGTGCAAATTACCTTAAGCTACCTCCGTATTCGTCAAAAGTACCGCATCAGTCTTCTCTGCTTCAAACTTTTAAATACTAAAAACACTTTTTTTTTTTTTTGAAAAAGATCTAAATATTCTGACACTTAATTGAATTTCAGGAGAAGATGAAAGAGAAGCTCTTGTATGCCATAACAGAGGGTCAAGGATCTTTCCACCTATCATGA

Protein sequence

>MS.gene029877.t1

MGSRGQKRPEMVDELPADKRACSSLDFRPSSSTASVQTDVSSTQSAMEPHDDMDTSSSASSHSEEEPEKDSADGSCDSDELEHYHSTLHEYHRQRLSSDHGKFKTIISSLSGQTEPSGQLAVLTELCEVLSFCTEGSISSMTSDLLSPLLVKLAKHESNPEIMLLSIRAITYICDLYPRSAGFLVRHDAVSALCQRLLTIEYQDVADQCLQALEKISREQPLACLQAGAIMAVLNYIDFFSTSIQRVALSTVVNICKKLPSESPTPFMEAVPILCNLLLYEDRQLVENVATCLIKIVDRVSHSSEMSDELCKHGLIQQVTHLLSVNGRATLSQLIYNGLIGLLVKLSSGSVVAFRTLYELNISITLRDILSAFDLSHGVSTSQLVGGHCNRVYEVLKLLNELLPGLEKDPNNQLALDKESFLANHPDLLQKLGMDVFPMLIQVFNSGASLSVCHGCLFVMYKFVCLTKSGMLVELLKNANISSFLAGVFTRKDHHMLMLALQIAEIILQNFSDIFLKLFIKEGVFFAIEALLTPERSSKLVYPSGVQLSLDSGQRSASREVPKCLCYTFSTAQSPTSSEAKKCKLDKDSVHNLAEHIKTKYLAPELYDSEKGLTDILKNLRALSNDLLSMSTDAGALAVHEEKINRVLDQIMDKLIGKEEVSTFEFIESGVAKALLNYLSLGQYMGENKGMHGVFGHNAVIEKRFEALASICLRTFQPLSGDTPLSILIRNLLSALTSLEAFPIILSNVQKMRNSFATVPNGCAVPYPCLKVRFVKEEKETCLSDCAEDFFTVDPFSSLHSIERYLWPKVSVKSAEDEKLSSGQVVLQPESPPLQLPSNTRSCVDEVPAISERAGMSTDLCETQGEEPKTSHPRPDQAVNVNAGESSSSGIQIAEQEMHFVAESDSKLGKEHPASCSNKAADKLIFYLEGQPLDPKLTLYQAILGQIVKQNDSGVSAKLWSHVHTLTYRAAVKPEDIMPSDCHSSSQDFPHDKVLALYQRTPFLSDMFYSELVSDLEKSSPTYDILFLLKSLEGMNRFIFHLMSRERMCAFAEGKVDNLDSLKITVPSVQLNEFVSSKLTEKLEQQMRDSMAVCVGSMPFWCNQLLASCPFLFSFEARCKYFKLAAFGQPRMPPHNNSETASDRRLGHGALPRKKFLVYRDRILESAAQMMKLHASHKVVLEVEYDEEVGTGLGPTLEFYTLVCQELQKSGSGMWREDASSYTIKTNLQAEETGIHSLYGLFPRPWLSTQDTSGGIQFSEVTNKFFLLGQVVAKALQDGRVLDLHFSKAFYKLILGKELYLYDIQSLDPELGRVLHEFQALVNRKFCLESVCEGNSELEQGLSFRDSRIEDLCLDFTLPGYPDTVLASGSDHTMVNMRNLEDYVSLIVDATVKSGISRQVEAFKSGFNQVFPIEHLQIFYEEELERILCGENDSWAINELADHIKFDHGYTASSPPIVNLLEIIREFDHGQRRAFLQFVTGTPRLPPGGLASLNPKLTIVRKHCSNQADTDLPSVMTCANYLKLPPYSSKEKMKEKLLYAITEGQGSFHLS