Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene049594.t1 | XP_019461676.1 | 100 | 148 | 0 | 0 | 1 | 148 | 50 | 197 | 1.50E-81 | 312 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene049594.t1 | P35135 | 98.0 | 148 | 3 | 0 | 1 | 148 | 1 | 148 | 1.2e-82 | 307.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene049594.t1 | B7FMV8 | 100.0 | 148 | 0 | 0 | 1 | 148 | 1 | 148 | 1.1e-81 | 312.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049594 | MS.gene07738 | 0.805037 | 1.62E-49 | -1.69E-46 |
MS.gene049594 | MS.gene37722 | 0.826799 | 2.22E-54 | -1.69E-46 |
MS.gene049594 | MS.gene43083 | 0.800381 | 1.48E-48 | -1.69E-46 |
MS.gene049594 | MS.gene77445 | 0.816347 | 5.79E-52 | -1.69E-46 |
PPI:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene049594.t1 | MTR_3g062450 | 100.000 | 148 | 0 | 0 | 1 | 148 | 1 | 148 | 6.68e-110 | 308 |
MS.gene049594.t1 | MTR_5g075580 | 98.649 | 148 | 2 | 0 | 1 | 148 | 1 | 148 | 1.46e-108 | 305 |
MS.gene049594.t1 | MTR_7g116940 | 97.297 | 148 | 4 | 0 | 1 | 148 | 1 | 148 | 2.68e-107 | 302 |
MS.gene049594.t1 | MTR_8g071040 | 93.919 | 148 | 9 | 0 | 1 | 148 | 1 | 148 | 2.75e-104 | 294 |
MS.gene049594.t1 | MTR_7g116940 | 92.903 | 155 | 4 | 1 | 1 | 148 | 1 | 155 | 3.58e-104 | 294 |
MS.gene049594.t1 | MTR_1g021150 | 91.892 | 148 | 12 | 0 | 1 | 148 | 1 | 148 | 5.88e-103 | 291 |
MS.gene049594.t1 | MTR_4g073240 | 91.892 | 148 | 12 | 0 | 1 | 148 | 1 | 148 | 6.35e-103 | 291 |
MS.gene049594.t1 | MTR_1g021150 | 92.063 | 126 | 10 | 0 | 23 | 148 | 31 | 156 | 2.47e-87 | 252 |
MS.gene049594.t1 | MTR_5g075580 | 98.319 | 119 | 2 | 0 | 30 | 148 | 1 | 119 | 2.73e-86 | 248 |
MS.gene049594.t1 | MTR_4g073240 | 92.437 | 119 | 9 | 0 | 30 | 148 | 1 | 119 | 6.54e-82 | 237 |
MS.gene049594.t1 | MTR_7g116940 | 94.495 | 109 | 6 | 0 | 1 | 109 | 1 | 109 | 9.98e-73 | 214 |
MS.gene049594.t1 | MTR_8g085690 | 51.034 | 145 | 71 | 0 | 2 | 146 | 23 | 167 | 7.10e-55 | 170 |
MS.gene049594.t1 | MTR_4g073240 | 91.566 | 83 | 7 | 0 | 66 | 148 | 4 | 86 | 9.24e-54 | 164 |
MS.gene049594.t1 | MTR_2g078010 | 48.276 | 145 | 75 | 0 | 4 | 148 | 8 | 152 | 6.33e-47 | 149 |
MS.gene049594.t1 | MTR_4g108080 | 45.890 | 146 | 74 | 1 | 2 | 142 | 5 | 150 | 3.85e-45 | 145 |
MS.gene049594.t1 | MTR_8g468530 | 45.205 | 146 | 75 | 1 | 2 | 142 | 21 | 166 | 6.38e-45 | 145 |
MS.gene049594.t1 | MTR_2g078010 | 44.025 | 159 | 75 | 1 | 4 | 148 | 8 | 166 | 5.65e-43 | 140 |
MS.gene049594.t1 | MTR_3g098780 | 48.611 | 144 | 72 | 2 | 5 | 146 | 6 | 149 | 4.83e-42 | 138 |
MS.gene049594.t1 | MTR_2g078010 | 47.445 | 137 | 72 | 0 | 4 | 140 | 8 | 144 | 6.15e-42 | 136 |
MS.gene049594.t1 | MTR_3g098780 | 48.611 | 144 | 72 | 2 | 5 | 146 | 30 | 173 | 1.13e-41 | 138 |
MS.gene049594.t1 | MTR_4g108080 | 48.571 | 105 | 54 | 0 | 2 | 106 | 5 | 109 | 1.40e-34 | 117 |
MS.gene049594.t1 | MTR_3g110110 | 40.136 | 147 | 84 | 3 | 5 | 147 | 7 | 153 | 4.34e-34 | 117 |
MS.gene049594.t1 | MTR_4g076200 | 44.355 | 124 | 69 | 0 | 4 | 127 | 35 | 158 | 7.66e-34 | 117 |
MS.gene049594.t1 | MTR_1g095510 | 45.669 | 127 | 68 | 1 | 3 | 128 | 43 | 169 | 6.35e-33 | 115 |
MS.gene049594.t1 | MTR_4g076200 | 44.248 | 113 | 63 | 0 | 19 | 131 | 9 | 121 | 4.33e-32 | 111 |
MS.gene049594.t1 | MTR_5g009020 | 41.406 | 128 | 75 | 0 | 4 | 131 | 35 | 162 | 4.76e-32 | 112 |
MS.gene049594.t1 | MTR_4g108080 | 47.706 | 109 | 52 | 1 | 39 | 142 | 42 | 150 | 6.16e-32 | 111 |
MS.gene049594.t1 | MTR_1g095510 | 48.598 | 107 | 55 | 0 | 22 | 128 | 9 | 115 | 7.14e-32 | 110 |
MS.gene049594.t1 | MTR_2g078010 | 48.515 | 101 | 52 | 0 | 4 | 104 | 8 | 108 | 1.79e-31 | 108 |
MS.gene049594.t1 | MTR_1g095510 | 48.649 | 111 | 56 | 1 | 3 | 112 | 43 | 153 | 1.75e-30 | 108 |
MS.gene049594.t1 | MTR_4g094872 | 36.842 | 152 | 89 | 2 | 1 | 145 | 4 | 155 | 2.11e-30 | 107 |
MS.gene049594.t1 | MTR_4g063490 | 35.821 | 134 | 72 | 2 | 15 | 134 | 18 | 151 | 2.84e-27 | 100 |
MS.gene049594.t1 | MTR_5g016630 | 33.553 | 152 | 94 | 2 | 1 | 145 | 4 | 155 | 4.38e-27 | 99.4 |
MS.gene049594.t1 | MTR_8g028920 | 37.398 | 123 | 75 | 2 | 26 | 146 | 25 | 147 | 9.78e-27 | 99.4 |
MS.gene049594.t1 | MTR_5g019480 | 36.765 | 136 | 83 | 2 | 5 | 139 | 36 | 169 | 2.53e-26 | 98.2 |
MS.gene049594.t1 | MTR_5g019480 | 36.765 | 136 | 83 | 2 | 5 | 139 | 33 | 166 | 2.73e-26 | 98.2 |
MS.gene049594.t1 | MTR_5g019480 | 39.286 | 112 | 67 | 1 | 28 | 139 | 8 | 118 | 2.15e-25 | 94.4 |
MS.gene049594.t1 | MTR_7g087590 | 34.965 | 143 | 93 | 0 | 4 | 146 | 13 | 155 | 3.25e-25 | 97.4 |
MS.gene049594.t1 | MTR_8g098595 | 36.975 | 119 | 73 | 2 | 30 | 146 | 14 | 132 | 4.91e-25 | 94.4 |
MS.gene049594.t1 | MTR_2g096690 | 34.028 | 144 | 81 | 2 | 15 | 144 | 18 | 161 | 8.85e-25 | 93.6 |
MS.gene049594.t1 | MTR_8g028920 | 39.623 | 106 | 62 | 2 | 43 | 146 | 3 | 108 | 7.16e-24 | 90.9 |
MS.gene049594.t1 | MTR_2g096690 | 37.600 | 125 | 64 | 2 | 15 | 125 | 18 | 142 | 2.26e-23 | 90.1 |
MS.gene049594.t1 | MTR_4g106690 | 30.894 | 123 | 83 | 2 | 26 | 146 | 25 | 147 | 3.07e-22 | 87.8 |
MS.gene049594.t1 | MTR_8g076490 | 38.835 | 103 | 61 | 2 | 1 | 102 | 15 | 116 | 4.69e-19 | 79.0 |
MS.gene049594.t1 | MTR_4g121960 | 34.454 | 119 | 68 | 4 | 2 | 114 | 11 | 125 | 2.73e-18 | 79.3 |
MS.gene049594.t1 | MTR_5g021260 | 36.893 | 103 | 63 | 2 | 1 | 102 | 15 | 116 | 7.54e-18 | 75.5 |
MS.gene049594.t1 | MTR_7g451800 | 36.885 | 122 | 67 | 3 | 4 | 115 | 38 | 159 | 3.86e-17 | 76.6 |
MS.gene049594.t1 | MTR_7g047620 | 36.885 | 122 | 67 | 3 | 4 | 115 | 38 | 159 | 3.86e-17 | 76.6 |
MS.gene049594.t1 | MTR_7g047570 | 36.885 | 122 | 67 | 3 | 4 | 115 | 38 | 159 | 8.63e-17 | 75.5 |
MS.gene049594.t1 | MTR_7g451770 | 36.885 | 122 | 67 | 3 | 4 | 115 | 38 | 159 | 8.63e-17 | 75.5 |
MS.gene049594.t1 | MTR_2g096690 | 37.374 | 99 | 48 | 2 | 15 | 99 | 18 | 116 | 2.36e-16 | 70.5 |
MS.gene049594.t1 | MTR_8g023380 | 32.479 | 117 | 70 | 3 | 4 | 115 | 8 | 120 | 6.60e-16 | 72.0 |
MS.gene049594.t1 | MTR_4g088835 | 30.667 | 150 | 91 | 4 | 4 | 143 | 672 | 818 | 1.54e-14 | 70.1 |
MS.gene049594.t1 | MTR_1g028540 | 71.739 | 46 | 13 | 0 | 102 | 147 | 83 | 128 | 1.67e-14 | 66.2 |
MS.gene049594.t1 | MTR_7g023760 | 30.894 | 123 | 75 | 3 | 3 | 115 | 90 | 212 | 1.84e-14 | 68.9 |
MS.gene049594.t1 | MTR_0274s0030 | 31.707 | 123 | 74 | 3 | 3 | 115 | 113 | 235 | 2.61e-14 | 68.9 |
MS.gene049594.t1 | MTR_4g086440 | 32.787 | 122 | 72 | 3 | 4 | 115 | 37 | 158 | 4.36e-14 | 68.2 |
MS.gene049594.t1 | MTR_4g020620 | 32.520 | 123 | 73 | 3 | 3 | 115 | 628 | 750 | 1.16e-13 | 67.4 |
MS.gene049594.t1 | MTR_4g020620 | 32.520 | 123 | 73 | 3 | 3 | 115 | 570 | 692 | 1.18e-13 | 67.4 |
MS.gene049594.t1 | MTR_2g013650 | 28.289 | 152 | 96 | 4 | 3 | 144 | 681 | 829 | 1.47e-13 | 67.0 |
MS.gene049594.t1 | MTR_1g073600 | 26.606 | 109 | 66 | 2 | 33 | 140 | 25 | 120 | 9.63e-13 | 61.6 |
MS.gene049594.t1 | MTR_2g079270 | 30.081 | 123 | 76 | 3 | 3 | 115 | 306 | 428 | 3.73e-12 | 63.2 |
MS.gene049594.t1 | MTR_1g092460 | 28.455 | 123 | 78 | 3 | 3 | 115 | 176 | 298 | 3.85e-12 | 62.8 |
MS.gene049594.t1 | MTR_1g092465 | 28.947 | 152 | 82 | 5 | 3 | 144 | 241 | 376 | 5.33e-12 | 62.4 |
MS.gene049594.t1 | MTR_1g112730 | 29.508 | 122 | 76 | 3 | 4 | 115 | 856 | 977 | 7.71e-12 | 62.4 |
MS.gene049594.t1 | MTR_2g018540 | 32.000 | 125 | 73 | 3 | 3 | 115 | 107 | 231 | 3.08e-11 | 60.1 |
MS.gene049594.t1 | MTR_1g092440 | 33.696 | 92 | 51 | 3 | 34 | 115 | 411 | 502 | 3.18e-11 | 60.5 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene049594.t1 | AT5G41700 | 96.622 | 148 | 5 | 0 | 1 | 148 | 1 | 148 | 2.35e-107 | 302 |
MS.gene049594.t1 | AT5G41700 | 96.622 | 148 | 5 | 0 | 1 | 148 | 1 | 148 | 2.35e-107 | 302 |
MS.gene049594.t1 | AT5G41700 | 96.622 | 148 | 5 | 0 | 1 | 148 | 1 | 148 | 2.35e-107 | 302 |
MS.gene049594.t1 | AT1G64230 | 95.946 | 148 | 6 | 0 | 1 | 148 | 1 | 148 | 2.65e-107 | 302 |
MS.gene049594.t1 | AT1G64230 | 95.946 | 148 | 6 | 0 | 1 | 148 | 1 | 148 | 2.65e-107 | 302 |
MS.gene049594.t1 | AT5G53300 | 95.946 | 148 | 6 | 0 | 1 | 148 | 1 | 148 | 8.04e-107 | 301 |
MS.gene049594.t1 | AT5G53300 | 95.946 | 148 | 6 | 0 | 1 | 148 | 1 | 148 | 8.04e-107 | 301 |
MS.gene049594.t1 | AT5G53300 | 95.946 | 148 | 6 | 0 | 1 | 148 | 1 | 148 | 8.04e-107 | 301 |
MS.gene049594.t1 | AT4G27960 | 95.270 | 148 | 7 | 0 | 1 | 148 | 1 | 148 | 1.66e-106 | 300 |
MS.gene049594.t1 | AT4G27960 | 95.270 | 148 | 7 | 0 | 1 | 148 | 31 | 178 | 5.57e-106 | 300 |
MS.gene049594.t1 | AT3G08690 | 93.919 | 148 | 9 | 0 | 1 | 148 | 1 | 148 | 5.87e-105 | 296 |
MS.gene049594.t1 | AT3G08690 | 93.919 | 148 | 9 | 0 | 1 | 148 | 1 | 148 | 5.87e-105 | 296 |
MS.gene049594.t1 | AT5G41700 | 95.302 | 149 | 6 | 1 | 1 | 148 | 1 | 149 | 1.51e-104 | 295 |
MS.gene049594.t1 | AT1G64230 | 89.809 | 157 | 7 | 1 | 1 | 148 | 1 | 157 | 1.01e-102 | 291 |
MS.gene049594.t1 | AT5G56150 | 89.189 | 148 | 16 | 0 | 1 | 148 | 1 | 148 | 1.21e-100 | 285 |
MS.gene049594.t1 | AT2G16740 | 87.755 | 147 | 18 | 0 | 1 | 147 | 1 | 147 | 7.24e-99 | 281 |
MS.gene049594.t1 | AT1G64230 | 74.211 | 190 | 7 | 1 | 1 | 148 | 1 | 190 | 2.80e-98 | 281 |
MS.gene049594.t1 | AT1G64230 | 74.211 | 190 | 7 | 1 | 1 | 148 | 1 | 190 | 2.80e-98 | 281 |
MS.gene049594.t1 | AT3G08700 | 79.195 | 149 | 30 | 1 | 1 | 148 | 1 | 149 | 3.06e-87 | 251 |
MS.gene049594.t1 | AT3G08700 | 79.195 | 149 | 30 | 1 | 1 | 148 | 1 | 149 | 3.06e-87 | 251 |
MS.gene049594.t1 | AT5G41700 | 96.154 | 104 | 4 | 0 | 1 | 104 | 1 | 104 | 1.32e-72 | 214 |
MS.gene049594.t1 | AT5G53300 | 93.578 | 109 | 5 | 1 | 1 | 107 | 1 | 109 | 9.55e-72 | 211 |
MS.gene049594.t1 | AT5G56150 | 87.379 | 103 | 13 | 0 | 1 | 103 | 1 | 103 | 3.52e-66 | 197 |
MS.gene049594.t1 | AT3G13550 | 48.276 | 145 | 75 | 0 | 2 | 146 | 37 | 181 | 2.27e-53 | 167 |
MS.gene049594.t1 | AT1G16890 | 49.655 | 145 | 73 | 0 | 4 | 148 | 8 | 152 | 3.15e-48 | 153 |
MS.gene049594.t1 | AT1G78870 | 48.966 | 145 | 74 | 0 | 4 | 148 | 8 | 152 | 2.86e-47 | 150 |
MS.gene049594.t1 | AT5G62540 | 49.254 | 134 | 68 | 0 | 2 | 135 | 5 | 138 | 7.46e-46 | 147 |
MS.gene049594.t1 | AT1G16890 | 47.403 | 154 | 72 | 1 | 4 | 148 | 8 | 161 | 1.44e-45 | 146 |
MS.gene049594.t1 | AT1G14400 | 46.575 | 146 | 73 | 1 | 2 | 142 | 5 | 150 | 1.59e-45 | 146 |
MS.gene049594.t1 | AT1G14400 | 46.575 | 146 | 73 | 1 | 2 | 142 | 5 | 150 | 1.59e-45 | 146 |
MS.gene049594.t1 | AT2G02760 | 45.890 | 146 | 74 | 1 | 2 | 142 | 5 | 150 | 3.50e-45 | 145 |
MS.gene049594.t1 | AT2G02760 | 45.890 | 146 | 74 | 1 | 2 | 142 | 5 | 150 | 3.50e-45 | 145 |
MS.gene049594.t1 | AT2G02760 | 45.890 | 146 | 74 | 1 | 2 | 142 | 5 | 150 | 3.50e-45 | 145 |
MS.gene049594.t1 | AT2G02760 | 45.890 | 146 | 74 | 1 | 2 | 142 | 5 | 150 | 3.50e-45 | 145 |
MS.gene049594.t1 | AT1G36340 | 48.966 | 145 | 73 | 1 | 2 | 146 | 9 | 152 | 3.68e-45 | 145 |
MS.gene049594.t1 | AT1G36340 | 48.966 | 145 | 73 | 1 | 2 | 146 | 9 | 152 | 3.68e-45 | 145 |
MS.gene049594.t1 | AT3G13550 | 50.000 | 114 | 57 | 0 | 2 | 115 | 37 | 150 | 2.88e-42 | 138 |
MS.gene049594.t1 | AT1G16890 | 52.101 | 119 | 57 | 0 | 30 | 148 | 1 | 119 | 4.24e-41 | 134 |
MS.gene049594.t1 | AT1G78870 | 52.101 | 119 | 57 | 0 | 30 | 148 | 1 | 119 | 7.40e-41 | 133 |
MS.gene049594.t1 | AT5G50870 | 45.833 | 144 | 76 | 2 | 5 | 146 | 6 | 149 | 1.81e-39 | 132 |
MS.gene049594.t1 | AT1G78870 | 51.667 | 120 | 57 | 1 | 30 | 148 | 1 | 120 | 4.44e-39 | 128 |
MS.gene049594.t1 | AT2G32790 | 49.342 | 152 | 68 | 4 | 2 | 148 | 30 | 177 | 2.26e-36 | 123 |
MS.gene049594.t1 | AT5G50870 | 42.581 | 155 | 76 | 3 | 5 | 146 | 6 | 160 | 4.66e-36 | 123 |
MS.gene049594.t1 | AT3G24515 | 44.586 | 157 | 74 | 3 | 3 | 146 | 8 | 164 | 2.18e-35 | 126 |
MS.gene049594.t1 | AT3G24515 | 46.721 | 122 | 61 | 1 | 29 | 146 | 68 | 189 | 9.70e-33 | 120 |
MS.gene049594.t1 | AT5G25760 | 38.776 | 147 | 86 | 3 | 5 | 147 | 7 | 153 | 1.07e-32 | 113 |
MS.gene049594.t1 | AT5G25760 | 38.776 | 147 | 86 | 3 | 5 | 147 | 7 | 153 | 1.07e-32 | 113 |
MS.gene049594.t1 | AT1G78870 | 48.571 | 105 | 54 | 0 | 4 | 108 | 8 | 112 | 2.07e-32 | 111 |
MS.gene049594.t1 | AT3G20060 | 42.742 | 124 | 71 | 0 | 4 | 127 | 39 | 162 | 7.14e-31 | 109 |
MS.gene049594.t1 | AT1G50490 | 43.548 | 124 | 70 | 0 | 4 | 127 | 38 | 161 | 2.14e-30 | 108 |
MS.gene049594.t1 | AT3G20060 | 43.636 | 110 | 62 | 0 | 22 | 131 | 12 | 121 | 2.70e-29 | 104 |
MS.gene049594.t1 | AT2G46030 | 36.486 | 148 | 91 | 3 | 1 | 146 | 1 | 147 | 2.55e-28 | 103 |
MS.gene049594.t1 | AT2G46030 | 36.486 | 148 | 91 | 3 | 1 | 146 | 1 | 147 | 2.55e-28 | 103 |
MS.gene049594.t1 | AT3G57870 | 34.868 | 152 | 92 | 2 | 1 | 145 | 5 | 156 | 4.40e-28 | 102 |
MS.gene049594.t1 | AT2G46030 | 36.486 | 148 | 91 | 3 | 1 | 146 | 73 | 219 | 6.34e-28 | 103 |
MS.gene049594.t1 | AT5G05080 | 37.063 | 143 | 90 | 0 | 4 | 146 | 13 | 155 | 8.21e-28 | 103 |
MS.gene049594.t1 | AT5G05080 | 37.063 | 143 | 90 | 0 | 4 | 146 | 13 | 155 | 8.21e-28 | 103 |
MS.gene049594.t1 | AT5G05080 | 37.063 | 143 | 90 | 0 | 4 | 146 | 13 | 155 | 8.21e-28 | 103 |
MS.gene049594.t1 | AT5G05080 | 37.063 | 143 | 90 | 0 | 4 | 146 | 13 | 155 | 8.21e-28 | 103 |
MS.gene049594.t1 | AT2G46030 | 39.024 | 123 | 73 | 2 | 26 | 146 | 28 | 150 | 9.39e-28 | 102 |
MS.gene049594.t1 | AT2G46030 | 39.024 | 123 | 73 | 2 | 26 | 146 | 28 | 150 | 9.39e-28 | 102 |
MS.gene049594.t1 | AT3G55380 | 36.567 | 134 | 71 | 2 | 15 | 134 | 19 | 152 | 7.98e-27 | 99.0 |
MS.gene049594.t1 | AT5G41340 | 38.211 | 123 | 74 | 2 | 26 | 146 | 25 | 147 | 9.98e-27 | 99.4 |
MS.gene049594.t1 | AT1G63800 | 38.211 | 123 | 74 | 2 | 26 | 146 | 10 | 132 | 1.18e-26 | 98.6 |
MS.gene049594.t1 | AT1G63800 | 38.211 | 123 | 74 | 2 | 26 | 146 | 25 | 147 | 1.28e-26 | 99.0 |
MS.gene049594.t1 | AT5G59300 | 34.722 | 144 | 80 | 2 | 15 | 144 | 18 | 161 | 2.28e-25 | 95.1 |
MS.gene049594.t1 | AT4G36800 | 35.036 | 137 | 84 | 3 | 5 | 139 | 34 | 167 | 4.01e-25 | 95.1 |
MS.gene049594.t1 | AT4G36800 | 35.036 | 137 | 84 | 3 | 5 | 139 | 34 | 167 | 4.01e-25 | 95.1 |
MS.gene049594.t1 | AT3G46460 | 34.028 | 144 | 81 | 2 | 15 | 144 | 18 | 161 | 4.08e-25 | 94.7 |
MS.gene049594.t1 | AT5G41340 | 40.385 | 104 | 60 | 2 | 45 | 146 | 9 | 112 | 1.38e-23 | 90.1 |
MS.gene049594.t1 | AT2G18600 | 35.036 | 137 | 84 | 3 | 5 | 139 | 35 | 168 | 2.56e-23 | 90.5 |
MS.gene049594.t1 | AT2G18600 | 35.036 | 137 | 84 | 3 | 5 | 139 | 35 | 168 | 2.56e-23 | 90.5 |
MS.gene049594.t1 | AT3G17000 | 36.975 | 119 | 65 | 4 | 2 | 114 | 12 | 126 | 2.01e-20 | 85.5 |
MS.gene049594.t1 | AT3G55380 | 28.994 | 169 | 72 | 3 | 15 | 135 | 19 | 187 | 1.29e-19 | 81.3 |
MS.gene049594.t1 | AT1G75440 | 38.889 | 108 | 60 | 3 | 1 | 107 | 15 | 117 | 8.11e-19 | 78.2 |
MS.gene049594.t1 | AT1G45050 | 37.864 | 103 | 62 | 2 | 1 | 102 | 15 | 116 | 2.71e-18 | 77.0 |
MS.gene049594.t1 | AT5G42990 | 38.835 | 103 | 61 | 2 | 1 | 102 | 15 | 116 | 4.25e-18 | 76.3 |
MS.gene049594.t1 | AT1G17280 | 34.188 | 117 | 68 | 3 | 4 | 115 | 8 | 120 | 3.52e-17 | 75.5 |
MS.gene049594.t1 | AT1G17280 | 34.188 | 117 | 68 | 3 | 4 | 115 | 8 | 120 | 3.52e-17 | 75.5 |
MS.gene049594.t1 | AT1G17280 | 34.188 | 117 | 68 | 3 | 4 | 115 | 8 | 120 | 3.52e-17 | 75.5 |
MS.gene049594.t1 | AT1G17280 | 34.188 | 117 | 68 | 3 | 4 | 115 | 8 | 120 | 3.52e-17 | 75.5 |
MS.gene049594.t1 | AT1G17280 | 34.188 | 117 | 68 | 3 | 4 | 115 | 8 | 120 | 3.52e-17 | 75.5 |
MS.gene049594.t1 | AT1G17280 | 34.188 | 117 | 68 | 3 | 4 | 115 | 8 | 120 | 3.52e-17 | 75.5 |
MS.gene049594.t1 | AT1G17280 | 34.188 | 117 | 68 | 3 | 4 | 115 | 8 | 120 | 3.52e-17 | 75.5 |
MS.gene049594.t1 | AT1G17280 | 34.188 | 117 | 68 | 3 | 4 | 115 | 8 | 120 | 3.52e-17 | 75.5 |
MS.gene049594.t1 | AT4G36410 | 35.185 | 108 | 64 | 3 | 1 | 107 | 15 | 117 | 3.59e-17 | 73.9 |
MS.gene049594.t1 | AT5G50430 | 34.188 | 117 | 68 | 3 | 4 | 115 | 8 | 120 | 4.32e-17 | 75.5 |
MS.gene049594.t1 | AT5G50430 | 34.188 | 117 | 68 | 3 | 4 | 115 | 8 | 120 | 4.32e-17 | 75.5 |
MS.gene049594.t1 | AT3G46460 | 30.631 | 111 | 64 | 1 | 47 | 144 | 9 | 119 | 1.15e-16 | 71.6 |
MS.gene049594.t1 | AT3G46460 | 30.631 | 111 | 64 | 1 | 47 | 144 | 9 | 119 | 1.15e-16 | 71.6 |
MS.gene049594.t1 | AT1G17280 | 31.707 | 123 | 69 | 3 | 4 | 115 | 8 | 126 | 8.30e-16 | 72.0 |
MS.gene049594.t1 | AT3G15355 | 28.289 | 152 | 96 | 4 | 3 | 144 | 334 | 482 | 1.14e-11 | 61.6 |
MS.gene049594.t1 | AT1G45050 | 34.831 | 89 | 56 | 2 | 1 | 88 | 15 | 102 | 1.24e-11 | 58.5 |
MS.gene049594.t1 | AT1G53025 | 30.328 | 122 | 75 | 3 | 4 | 115 | 274 | 395 | 2.67e-11 | 60.5 |
MS.gene049594.t1 | AT1G53025 | 30.328 | 122 | 75 | 3 | 4 | 115 | 274 | 395 | 2.98e-11 | 60.5 |
MS.gene049594.t1 | AT1G53023 | 31.148 | 122 | 74 | 3 | 4 | 115 | 60 | 181 | 6.34e-11 | 59.3 |
Find 48 sgRNAs with CRISPR-Local
Find 171 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CAATACTGCAGGTTGCATTT+AGG | 0.246319 | 3.2:-58656255 | MS.gene049594:intron |
CTTCCATTGCTGTTGATGTT+TGG | 0.284673 | 3.2:+58656217 | None:intergenic |
TTGTACATATGTGCAATTTC+AGG | 0.297625 | 3.2:+58655456 | None:intergenic |
TTCCATTGCTGTTGATGTTT+GGG | 0.299216 | 3.2:+58656218 | None:intergenic |
CACAAGCGGGTCATCGGGAT+TGG | 0.353907 | 3.2:+58655479 | None:intergenic |
TATTTGTCTCGACATTCTTA+AGG | 0.371764 | 3.2:-58656194 | MS.gene049594:CDS |
GTCAATCTGCTCATTGTTGA+CGG | 0.386180 | 3.2:-58655505 | MS.gene049594:CDS |
AATACCTTTGGTGGCTTGAA+AGG | 0.424308 | 3.2:+58657527 | None:intergenic |
ACAAGCGGGTCATCGGGATT+GGG | 0.433760 | 3.2:+58655480 | None:intergenic |
TCAACTTTCAATACCTTTGG+TGG | 0.434012 | 3.2:+58657518 | None:intergenic |
GCGTGCGGTTGCTTCATACT+TGG | 0.443187 | 3.2:+58655422 | None:intergenic |
TCAGGCACAAGCGGGTCATC+GGG | 0.450503 | 3.2:+58655474 | None:intergenic |
CTAAAATCAAACCTTGGAAA+TGG | 0.452900 | 3.2:+58656150 | None:intergenic |
TTCAGGCACAAGCGGGTCAT+CGG | 0.461878 | 3.2:+58655473 | None:intergenic |
ATGAAGCAACCGCACGCAGC+TGG | 0.472596 | 3.2:-58655416 | MS.gene049594:CDS |
GCAGGTTGCATTTAGGACTA+AGG | 0.478226 | 3.2:-58656248 | MS.gene049594:intron |
ACCTTGGAAATGGTCAGTGC+AGG | 0.479512 | 3.2:+58656160 | None:intergenic |
TCATTGGCAAGCAACAATCA+TGG | 0.479981 | 3.2:-58657615 | MS.gene049594:CDS |
TGGCTGAGGACATGTTTCAT+TGG | 0.495052 | 3.2:-58657631 | MS.gene049594:CDS |
CATTGCTGTTGATGTTTGGG+TGG | 0.507557 | 3.2:+58656221 | None:intergenic |
CATTGGCAAGCAACAATCAT+GGG | 0.510542 | 3.2:-58657614 | MS.gene049594:CDS |
CCCTGCACTGACCATTTCCA+AGG | 0.514922 | 3.2:-58656161 | MS.gene049594:intron |
CCACCAACATCATGCAGTGC+AGG | 0.515198 | 3.2:-58658024 | MS.gene049594:intron |
GGTGGCTTGAAAGGATAATC+CGG | 0.519061 | 3.2:+58657536 | None:intergenic |
CCAGCATAGGGGCTATCAGC+AGG | 0.520199 | 3.2:+58657590 | None:intergenic |
CCTGCACTGCATGATGTTGG+TGG | 0.521666 | 3.2:+58658024 | None:intergenic |
CCTGCTGATAGCCCCTATGC+TGG | 0.528822 | 3.2:-58657590 | MS.gene049594:CDS |
ATTTGAGCATGGCATCGAAA+CGG | 0.533369 | 3.2:-58658080 | None:intergenic |
CACATATGTACAAGACTGAC+AGG | 0.541007 | 3.2:-58655446 | MS.gene049594:CDS |
TCACCTGCACTGCATGATGT+TGG | 0.572393 | 3.2:+58658021 | None:intergenic |
CACCCAAACATCAACAGCAA+TGG | 0.573454 | 3.2:-58656220 | MS.gene049594:CDS |
TGAAACATGTCCTCAGCCAC+AGG | 0.579671 | 3.2:+58657635 | None:intergenic |
GTGCAATTTCAGGCACAAGC+GGG | 0.582074 | 3.2:+58655466 | None:intergenic |
CCTTGGAAATGGTCAGTGCA+GGG | 0.590131 | 3.2:+58656161 | None:intergenic |
CTGGACACAGAAGTATGCCA+TGG | 0.597546 | 3.2:-58655397 | MS.gene049594:CDS |
GCAAATCCTTGAGCTCCTTG+AGG | 0.601494 | 3.2:+58658055 | None:intergenic |
ACGGATCCTCAAGGAGCTCA+AGG | 0.606874 | 3.2:-58658061 | MS.gene049594:CDS |
GCTGATAGCCCCTATGCTGG+TGG | 0.620584 | 3.2:-58657587 | MS.gene049594:CDS |
TTATCCTTTCAAGCCACCAA+AGG | 0.620724 | 3.2:-58657531 | MS.gene049594:intron |
AGGAGGAATTGGTCATCCCA+TGG | 0.622867 | 3.2:+58655380 | None:intergenic |
TCGACATTCTTAAGGAACAA+TGG | 0.626316 | 3.2:-58656186 | MS.gene049594:CDS |
GGAGCTCAAGGATTTGCAGA+AGG | 0.628349 | 3.2:-58658049 | MS.gene049594:CDS |
GGCATCGAAACGGATCCTCA+AGG | 0.650007 | 3.2:-58658070 | MS.gene049594:CDS |
TGGACACAGAAGTATGCCAT+GGG | 0.652544 | 3.2:-58655396 | MS.gene049594:CDS |
TGTGCAATTTCAGGCACAAG+CGG | 0.661456 | 3.2:+58655465 | None:intergenic |
CTTCTGTGTCCAGCTGCGTG+CGG | 0.688818 | 3.2:+58655407 | None:intergenic |
AAAACACACCACCAGCATAG+GGG | 0.699264 | 3.2:+58657579 | None:intergenic |
GGCTTGAAAGGATAATCCGG+AGG | 0.706238 | 3.2:+58657539 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GATAATTAATGATTTATATA+AGG | - | chr3.2:58657349-58657368 | MS.gene049594:intron | 10.0% |
!! | TAAATGCTAATTATTATATT+TGG | - | chr3.2:58656376-58656395 | MS.gene049594:intron | 10.0% |
!! | TATATGATAAAAGAAAAAAA+GGG | + | chr3.2:58655492-58655511 | None:intergenic | 10.0% |
!! | AAAAATCATAAAACAACAAA+AGG | + | chr3.2:58655610-58655629 | None:intergenic | 15.0% |
!! | AAAATCATAAAACAACAAAA+GGG | + | chr3.2:58655609-58655628 | None:intergenic | 15.0% |
!! | CTATATGATAAAAGAAAAAA+AGG | + | chr3.2:58655493-58655512 | None:intergenic | 15.0% |
!! | TGAAAACAGAAAAAATAATA+TGG | + | chr3.2:58656244-58656263 | None:intergenic | 15.0% |
!! | TTGAAAAAAAAAATGATCAT+TGG | - | chr3.2:58656771-58656790 | MS.gene049594:intron | 15.0% |
!!! | ATTATTTGTTAGATATGTTA+TGG | - | chr3.2:58655718-58655737 | MS.gene049594:intron | 15.0% |
!!! | TTTGAAAGTTTTATTCTTTT+TGG | - | chr3.2:58656066-58656085 | MS.gene049594:intron | 15.0% |
!!! | TTTTTATCAATGATTTGTTA+TGG | - | chr3.2:58655625-58655644 | MS.gene049594:intron | 15.0% |
!!! | TTTTTTTTTCAATTAACACA+GGG | + | chr3.2:58656763-58656782 | None:intergenic | 15.0% |
!!! | TTTTTTTTTTCAATTAACAC+AGG | + | chr3.2:58656764-58656783 | None:intergenic | 15.0% |
!! | AAAAAAAAATGATCATTGGT+TGG | - | chr3.2:58656775-58656794 | MS.gene049594:intron | 20.0% |
!! | AATTATAGACATGAAACTTT+AGG | - | chr3.2:58655688-58655707 | MS.gene049594:intron | 20.0% |
!! | AGCTAAAAATCAAAACTTTA+AGG | + | chr3.2:58655528-58655547 | None:intergenic | 20.0% |
!! | GCTAAAAATCAAAACTTTAA+GGG | + | chr3.2:58655527-58655546 | None:intergenic | 20.0% |
!! | TAGTATAAATAAGAGATTGT+AGG | + | chr3.2:58656562-58656581 | None:intergenic | 20.0% |
!! | TTTGTTAATTGTTTGGAAAA+TGG | - | chr3.2:58657388-58657407 | MS.gene049594:intron | 20.0% |
!!! | AAATCATGAATCTTTTTCTT+GGG | + | chr3.2:58657610-58657629 | None:intergenic | 20.0% |
!!! | ATAATTTGTTGAGATTTGTT+TGG | - | chr3.2:58656007-58656026 | MS.gene049594:intron | 20.0% |
!!! | ATGATGATGTTTTGTATTTT+AGG | - | chr3.2:58655805-58655824 | MS.gene049594:intron | 20.0% |
!!! | ATTTTTAAAAAATCGCTATG+AGG | - | chr3.2:58656275-58656294 | MS.gene049594:intron | 20.0% |
! | TACACTTTAATCAATGAATC+AGG | - | chr3.2:58657415-58657434 | MS.gene049594:intron | 25.0% |
! | TTGAGATAATTAAAGAGCAA+GGG | + | chr3.2:58656599-58656618 | None:intergenic | 25.0% |
!! | AAGTTGATCATATGATTGTT+AGG | - | chr3.2:58657795-58657814 | MS.gene049594:intron | 25.0% |
!! | ATCCTAACATTCACTATTTT+AGG | - | chr3.2:58657929-58657948 | MS.gene049594:intron | 25.0% |
!! | CAAATCATGAATCTTTTTCT+TGG | + | chr3.2:58657611-58657630 | None:intergenic | 25.0% |
!! | TTATGGATCTGTTATTTGAA+GGG | - | chr3.2:58655642-58655661 | MS.gene049594:intron | 25.0% |
AAAAATAATATGGTCCCTGT+CGG | + | chr3.2:58656234-58656253 | None:intergenic | 30.0% | |
AACATAAAACTATCTTCAGG+TGG | + | chr3.2:58657041-58657060 | None:intergenic | 30.0% | |
ACTATTATCAAGTCCTTACT+TGG | + | chr3.2:58656526-58656545 | None:intergenic | 30.0% | |
AGATCAGTGGAAAACAAAAA+AGG | + | chr3.2:58656824-58656843 | None:intergenic | 30.0% | |
ATGTTATGGTTTATGAAGCT+AGG | - | chr3.2:58655732-58655751 | MS.gene049594:intron | 30.0% | |
CAACAACTAAAATCAAACCT+TGG | + | chr3.2:58657323-58657342 | None:intergenic | 30.0% | |
CACCTAAAATAGTGAATGTT+AGG | + | chr3.2:58657934-58657953 | None:intergenic | 30.0% | |
CCTAACATAAAACTATCTTC+AGG | + | chr3.2:58657044-58657063 | None:intergenic | 30.0% | |
CTAAAATCAAACCTTGGAAA+TGG | + | chr3.2:58657317-58657336 | None:intergenic | 30.0% | |
CTTGAGATAATTAAAGAGCA+AGG | + | chr3.2:58656600-58656619 | None:intergenic | 30.0% | |
GTCAATATTAACAACATCCA+CGG | + | chr3.2:58657012-58657031 | None:intergenic | 30.0% | |
GTTTCAACTTTCAATACCTT+TGG | + | chr3.2:58655952-58655971 | None:intergenic | 30.0% | |
GTTTGCAAACTCAATTAAAC+CGG | + | chr3.2:58657134-58657153 | None:intergenic | 30.0% | |
TATTTGTCTCGACATTCTTA+AGG | - | chr3.2:58657270-58657289 | MS.gene049594:intron | 30.0% | |
TGAGATAATTAAAGAGCAAG+GGG | + | chr3.2:58656598-58656617 | None:intergenic | 30.0% | |
TTGTACATATGTGCAATTTC+AGG | + | chr3.2:58658011-58658030 | None:intergenic | 30.0% | |
TTTAAAAAATCGCTATGAGG+AGG | - | chr3.2:58656278-58656297 | MS.gene049594:intron | 30.0% | |
TTTGCAAACATCTTGTACTT+TGG | - | chr3.2:58657145-58657164 | MS.gene049594:intron | 30.0% | |
TTTGTTGATGTCATTCTTGT+GGG | - | chr3.2:58657549-58657568 | MS.gene049594:CDS | 30.0% | |
! | AGCTTGATCGATAATTTTGA+CGG | + | chr3.2:58656404-58656423 | None:intergenic | 30.0% |
! | GTTATGGATCTGTTATTTGA+AGG | - | chr3.2:58655641-58655660 | MS.gene049594:intron | 30.0% |
! | TTTTCTTTTTCTTGCTGATG+AGG | - | chr3.2:58657068-58657087 | MS.gene049594:intron | 30.0% |
! | TTTTGTTGATGTCATTCTTG+TGG | - | chr3.2:58657548-58657567 | MS.gene049594:CDS | 30.0% |
!! | GACAAGCTTTGTTAATTGTT+TGG | - | chr3.2:58657381-58657400 | MS.gene049594:intron | 30.0% |
!! | TGTTATTTGAAGGGTTTTTG+AGG | - | chr3.2:58655651-58655670 | MS.gene049594:intron | 30.0% |
!!! | CCTGAAGATAGTTTTATGTT+AGG | - | chr3.2:58657041-58657060 | MS.gene049594:intron | 30.0% |
!!! | CGAAGAACTGTGATTTTTTT+TGG | - | chr3.2:58657656-58657675 | MS.gene049594:intron | 30.0% |
AAAATAATATGGTCCCTGTC+GGG | + | chr3.2:58656233-58656252 | None:intergenic | 35.0% | |
AACAACAACATTCCAAATGC+AGG | + | chr3.2:58657869-58657888 | None:intergenic | 35.0% | |
ACACACACAAACTATATCTC+AGG | + | chr3.2:58657766-58657785 | None:intergenic | 35.0% | |
ACAGATCATACATACAAGCT+AGG | + | chr3.2:58655975-58655994 | None:intergenic | 35.0% | |
ATAATTAAAGAGCAAGGGGA+TGG | + | chr3.2:58656594-58656613 | None:intergenic | 35.0% | |
CAAATGCAGGTCATTAAACA+CGG | + | chr3.2:58657856-58657875 | None:intergenic | 35.0% | |
CAGATCATACATACAAGCTA+GGG | + | chr3.2:58655974-58655993 | None:intergenic | 35.0% | |
CCAAGTTCAGTATATTTGTC+CGG | - | chr3.2:58657112-58657131 | MS.gene049594:intron | 35.0% | |
TATCAAGTCCTTACTTGGTA+AGG | + | chr3.2:58656521-58656540 | None:intergenic | 35.0% | |
TATTTGTGTTGCAACTTGCA+AGG | - | chr3.2:58656673-58656692 | MS.gene049594:intron | 35.0% | |
TCAACTTTCAATACCTTTGG+TGG | + | chr3.2:58655949-58655968 | None:intergenic | 35.0% | |
TCGACATTCTTAAGGAACAA+TGG | - | chr3.2:58657278-58657297 | MS.gene049594:intron | 35.0% | |
TTATTGTCTTGCAATACTGC+AGG | - | chr3.2:58657198-58657217 | MS.gene049594:intron | 35.0% | |
! | GGTTTCAATTCATTTTCCTC+CGG | - | chr3.2:58655909-58655928 | MS.gene049594:intron | 35.0% |
! | GTTGTTGTTCTTATGTGTCA+TGG | - | chr3.2:58657880-58657899 | MS.gene049594:intron | 35.0% |
! | TTCCATTGCTGTTGATGTTT+GGG | + | chr3.2:58657249-58657268 | None:intergenic | 35.0% |
!! | GCTTGATCGATAATTTTGAC+GGG | + | chr3.2:58656403-58656422 | None:intergenic | 35.0% |
!! | GTTTTGTATTTTAGGTCCTG+TGG | - | chr3.2:58655813-58655832 | MS.gene049594:intron | 35.0% |
AAAAACACACCACCAGCATA+GGG | + | chr3.2:58655889-58655908 | None:intergenic | 40.0% | |
AAATAACCTGAGGCTTCTTG+AGG | + | chr3.2:58656658-58656677 | None:intergenic | 40.0% | |
AACTGGGACAAAAAGATCAG+TGG | + | chr3.2:58656837-58656856 | None:intergenic | 40.0% | |
ACAACATCCACGGATTTCAT+TGG | + | chr3.2:58657002-58657021 | None:intergenic | 40.0% | |
ATCTCAAGCAAACAAGCTAG+TGG | - | chr3.2:58656612-58656631 | MS.gene049594:intron | 40.0% | |
CAACAGTTTGCAATACACTC+AGG | + | chr3.2:58656732-58656751 | None:intergenic | 40.0% | |
CAATACTGCAGGTTGCATTT+AGG | - | chr3.2:58657209-58657228 | MS.gene049594:intron | 40.0% | |
CACATATGTACAAGACTGAC+AGG | - | chr3.2:58658018-58658037 | MS.gene049594:intron | 40.0% | |
CATAAAATCGATCCTCTGCA+AGG | - | chr3.2:58656495-58656514 | MS.gene049594:intron | 40.0% | |
CATTGGCAAGCAACAATCAT+GGG | - | chr3.2:58655850-58655869 | MS.gene049594:intron | 40.0% | |
CCGGACAAATATACTGAACT+TGG | + | chr3.2:58657115-58657134 | None:intergenic | 40.0% | |
CGTGTTTAATGACCTGCATT+TGG | - | chr3.2:58657854-58657873 | MS.gene049594:intron | 40.0% | |
GCAATGAAAGCTTTGCATCT+TGG | + | chr3.2:58656352-58656371 | None:intergenic | 40.0% | |
GTCAATCTGCTCATTGTTGA+CGG | - | chr3.2:58657959-58657978 | MS.gene049594:intron | 40.0% | |
GTTGCAACACAAATAACCTG+AGG | + | chr3.2:58656668-58656687 | None:intergenic | 40.0% | |
TCATTGGCAAGCAACAATCA+TGG | - | chr3.2:58655849-58655868 | MS.gene049594:intron | 40.0% | |
TCTCAAACCAATGAAATCCG+TGG | - | chr3.2:58656992-58657011 | MS.gene049594:intron | 40.0% | |
TCTCAAGCAAACAAGCTAGT+GGG | - | chr3.2:58656613-58656632 | MS.gene049594:intron | 40.0% | |
TTATCCTTTCAAGCCACCAA+AGG | - | chr3.2:58655933-58655952 | MS.gene049594:intron | 40.0% | |
TTGATGTCATTCTTGTGGGA+AGG | - | chr3.2:58657553-58657572 | MS.gene049594:CDS | 40.0% | |
! | AATACCTTTGGTGGCTTGAA+AGG | + | chr3.2:58655940-58655959 | None:intergenic | 40.0% |
! | CTTCCATTGCTGTTGATGTT+TGG | + | chr3.2:58657250-58657269 | None:intergenic | 40.0% |
!! | CTTGCAGAGGATCGATTTTA+TGG | + | chr3.2:58656497-58656516 | None:intergenic | 40.0% |
!!! | GAAGGGTTTTTGAGGTGATT+TGG | - | chr3.2:58655659-58655678 | MS.gene049594:intron | 40.0% |
!!! | TGTTTTGAGGGGTGAATGTT+TGG | - | chr3.2:58656195-58656214 | MS.gene049594:CDS | 40.0% |
AAAACACACCACCAGCATAG+GGG | + | chr3.2:58655888-58655907 | None:intergenic | 45.0% | |
AGACGACAATTGTGAACGTG+TGG | + | chr3.2:58656886-58656905 | None:intergenic | 45.0% | |
CAAAAACACACCACCAGCAT+AGG | + | chr3.2:58655890-58655909 | None:intergenic | 45.0% | |
CACCCAAACATCAACAGCAA+TGG | - | chr3.2:58657244-58657263 | MS.gene049594:intron | 45.0% | |
CTCAAGCAAACAAGCTAGTG+GGG | - | chr3.2:58656614-58656633 | MS.gene049594:intron | 45.0% | |
GGTGGCTTGAAAGGATAATC+CGG | + | chr3.2:58655931-58655950 | None:intergenic | 45.0% | |
GTCGTGGTATTAAAGCGCAT+CGG | + | chr3.2:58656328-58656347 | None:intergenic | 45.0% | |
TCTTGAGGCAGGTTTATGCT+AGG | + | chr3.2:58656643-58656662 | None:intergenic | 45.0% | |
TGGCTGAGGACATGTTTCAT+TGG | - | chr3.2:58655833-58655852 | MS.gene049594:intron | 45.0% | |
TGTGCAATTTCAGGCACAAG+CGG | + | chr3.2:58658002-58658021 | None:intergenic | 45.0% | |
TTGCAATACACTCAGGCTCT+CGG | + | chr3.2:58656725-58656744 | None:intergenic | 45.0% | |
! | AAGCAACCTTTTCCTGAAGG+CGG | + | chr3.2:58656427-58656446 | None:intergenic | 45.0% |
! | CATTGCTGTTGATGTTTGGG+TGG | + | chr3.2:58657246-58657265 | None:intergenic | 45.0% |
! | CTATGAGGAGGTTCTAACCA+TGG | - | chr3.2:58656290-58656309 | MS.gene049594:intron | 45.0% |
! | GAGAAGCAACCTTTTCCTGA+AGG | + | chr3.2:58656430-58656449 | None:intergenic | 45.0% |
! | GCAGGTTGCATTTAGGACTA+AGG | - | chr3.2:58657216-58657235 | MS.gene049594:intron | 45.0% |
! | TGGACACAGAAGTATGCCAT+GGG | - | chr3.2:58658068-58658087 | MS.gene049594:CDS | 45.0% |
!! | CTATGCTGGTGGTGTGTTTT+TGG | - | chr3.2:58655888-58655907 | MS.gene049594:intron | 45.0% |
!! | TATTTTAGGTCCTGTGGCTG+AGG | - | chr3.2:58655819-58655838 | MS.gene049594:intron | 45.0% |
!!! | ATGATTTATTTTTAAAATTA+TGG | - | chr3.2:58655580-58655599 | MS.gene049594:intron | 5.0% |
AAATCTATCTAGCCGCGCAG+TGG | - | chr3.2:58656165-58656184 | MS.gene049594:CDS | 50.0% | |
ACCTTACCTCAATGCCGAAG+TGG | - | chr3.2:58656699-58656718 | MS.gene049594:intron | 50.0% | |
ACCTTGGAAATGGTCAGTGC+AGG | + | chr3.2:58657307-58657326 | None:intergenic | 50.0% | |
CCTTGGAAATGGTCAGTGCA+GGG | + | chr3.2:58657306-58657325 | None:intergenic | 50.0% | |
CTGCAAGGCCTTACCAAGTA+AGG | - | chr3.2:58656510-58656529 | MS.gene049594:intron | 50.0% | |
GCAAATCCTTGAGCTCCTTG+AGG | + | chr3.2:58655412-58655431 | None:intergenic | 50.0% | |
GCATGCATGCAAGCGAAACT+GGG | + | chr3.2:58656853-58656872 | None:intergenic | 50.0% | |
GGAGCTCAAGGATTTGCAGA+AGG | - | chr3.2:58655415-58655434 | MS.gene049594:CDS | 50.0% | |
GGCTTGAAAGGATAATCCGG+AGG | + | chr3.2:58655928-58655947 | None:intergenic | 50.0% | |
GTGCAATTTCAGGCACAAGC+GGG | + | chr3.2:58658001-58658020 | None:intergenic | 50.0% | |
TACTTGGTAAGGCCTTGCAG+AGG | + | chr3.2:58656510-58656529 | None:intergenic | 50.0% | |
TCACCTGCACTGCATGATGT+TGG | + | chr3.2:58655446-58655465 | None:intergenic | 50.0% | |
TGAAACATGTCCTCAGCCAC+AGG | + | chr3.2:58655832-58655851 | None:intergenic | 50.0% | |
TGCATGCATGCAAGCGAAAC+TGG | + | chr3.2:58656854-58656873 | None:intergenic | 50.0% | |
TTGAGGGGTGAATGTTTGGC+AGG | - | chr3.2:58656199-58656218 | MS.gene049594:CDS | 50.0% | |
! | CTGGACACAGAAGTATGCCA+TGG | - | chr3.2:58658067-58658086 | MS.gene049594:CDS | 50.0% |
AACCTGAGGCTTCTTGAGGC+AGG | + | chr3.2:58656654-58656673 | None:intergenic | 55.0% | |
AACCTGCCTCAAGAAGCCTC+AGG | - | chr3.2:58656649-58656668 | MS.gene049594:intron | 55.0% | |
ACAAGCGGGTCATCGGGATT+GGG | + | chr3.2:58657987-58658006 | None:intergenic | 55.0% | |
ACGGATCCTCAAGGAGCTCA+AGG | - | chr3.2:58655403-58655422 | MS.gene049594:CDS | 55.0% | |
AGAGCAAGGGGATGGACGAA+TGG | + | chr3.2:58656586-58656605 | None:intergenic | 55.0% | |
AGCTTTGCATCTTGGCGTCG+TGG | + | chr3.2:58656344-58656363 | None:intergenic | 55.0% | |
ATCGATCAAGCTCCGCCTTC+AGG | - | chr3.2:58656412-58656431 | MS.gene049594:intron | 55.0% | |
CAAGCTCCGCCTTCAGGAAA+AGG | - | chr3.2:58656418-58656437 | MS.gene049594:intron | 55.0% | |
CCACCAACATCATGCAGTGC+AGG | - | chr3.2:58655440-58655459 | MS.gene049594:CDS | 55.0% | |
CCTGCACTGCATGATGTTGG+TGG | + | chr3.2:58655443-58655462 | None:intergenic | 55.0% | |
GAGCAAGGGGATGGACGAAT+GGG | + | chr3.2:58656585-58656604 | None:intergenic | 55.0% | |
GCGTGCGGTTGCTTCATACT+TGG | + | chr3.2:58658045-58658064 | None:intergenic | 55.0% | |
TTCAGGCACAAGCGGGTCAT+CGG | + | chr3.2:58657994-58658013 | None:intergenic | 55.0% | |
! | AGGTTCTAACCATGGACGCG+AGG | - | chr3.2:58656298-58656317 | MS.gene049594:intron | 55.0% |
! | ATCGGTTTACCTCGCGTCCA+TGG | + | chr3.2:58656310-58656329 | None:intergenic | 55.0% |
! | CCCTGCACTGACCATTTCCA+AGG | - | chr3.2:58657303-58657322 | MS.gene049594:intron | 55.0% |
! | GCCACTTCGGCATTGAGGTA+AGG | + | chr3.2:58656703-58656722 | None:intergenic | 55.0% |
! | GGCATCGAAACGGATCCTCA+AGG | - | chr3.2:58655394-58655413 | MS.gene049594:CDS | 55.0% |
!! | AGTGGCGGGGTCTGTTTTGA+GGG | - | chr3.2:58656183-58656202 | MS.gene049594:CDS | 55.0% |
ACTCAGGCTCTCGGCCACTT+CGG | + | chr3.2:58656716-58656735 | None:intergenic | 60.0% | |
ATGAAGCAACCGCACGCAGC+TGG | - | chr3.2:58658048-58658067 | MS.gene049594:CDS | 60.0% | |
CACAAGCGGGTCATCGGGAT+TGG | + | chr3.2:58657988-58658007 | None:intergenic | 60.0% | |
CCAGCATAGGGGCTATCAGC+AGG | + | chr3.2:58655877-58655896 | None:intergenic | 60.0% | |
CCTGCTGATAGCCCCTATGC+TGG | - | chr3.2:58655874-58655893 | MS.gene049594:intron | 60.0% | |
CTTCTGTGTCCAGCTGCGTG+CGG | + | chr3.2:58658060-58658079 | None:intergenic | 60.0% | |
GCTGATAGCCCCTATGCTGG+TGG | - | chr3.2:58655877-58655896 | MS.gene049594:intron | 60.0% | |
TCAGGCACAAGCGGGTCATC+GGG | + | chr3.2:58657993-58658012 | None:intergenic | 60.0% | |
TCTATCTAGCCGCGCAGTGG+CGG | - | chr3.2:58656168-58656187 | MS.gene049594:CDS | 60.0% | |
TCTCGGCCACTTCGGCATTG+AGG | + | chr3.2:58656708-58656727 | None:intergenic | 60.0% | |
!! | CAGTGGCGGGGTCTGTTTTG+AGG | - | chr3.2:58656182-58656201 | MS.gene049594:CDS | 60.0% |
!! | GTGGCGGGGTCTGTTTTGAG+GGG | - | chr3.2:58656184-58656203 | MS.gene049594:CDS | 60.0% |
AAACAGACCCCGCCACTGCG+CGG | + | chr3.2:58656180-58656199 | None:intergenic | 65.0% | |
CTATCTAGCCGCGCAGTGGC+GGG | - | chr3.2:58656169-58656188 | MS.gene049594:CDS | 65.0% | |
GCAGGCAGTCGATCCCGACA+GGG | - | chr3.2:58656217-58656236 | MS.gene049594:CDS | 65.0% | |
TATCTAGCCGCGCAGTGGCG+GGG | - | chr3.2:58656170-58656189 | MS.gene049594:CDS | 65.0% | |
GGCAGGCAGTCGATCCCGAC+AGG | - | chr3.2:58656216-58656235 | MS.gene049594:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.2 | gene | 58655392 | 58658094 | 58655392 | ID=MS.gene049594 |
chr3.2 | mRNA | 58655392 | 58658094 | 58655392 | ID=MS.gene049594.t1;Parent=MS.gene049594 |
chr3.2 | exon | 58658025 | 58658094 | 58658025 | ID=MS.gene049594.t1.exon1;Parent=MS.gene049594.t1 |
chr3.2 | CDS | 58658025 | 58658094 | 58658025 | ID=cds.MS.gene049594.t1;Parent=MS.gene049594.t1 |
chr3.2 | exon | 58657532 | 58657659 | 58657532 | ID=MS.gene049594.t1.exon2;Parent=MS.gene049594.t1 |
chr3.2 | CDS | 58657532 | 58657659 | 58657532 | ID=cds.MS.gene049594.t1;Parent=MS.gene049594.t1 |
chr3.2 | exon | 58656162 | 58656266 | 58656162 | ID=MS.gene049594.t1.exon3;Parent=MS.gene049594.t1 |
chr3.2 | CDS | 58656162 | 58656266 | 58656162 | ID=cds.MS.gene049594.t1;Parent=MS.gene049594.t1 |
chr3.2 | exon | 58655392 | 58655535 | 58655392 | ID=MS.gene049594.t1.exon4;Parent=MS.gene049594.t1 |
chr3.2 | CDS | 58655392 | 58655535 | 58655392 | ID=cds.MS.gene049594.t1;Parent=MS.gene049594.t1 |
Gene Sequence |
Protein sequence |