Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029883.t1 | KEH42298.1 | 90.4 | 417 | 0 | 1 | 1 | 377 | 1 | 417 | 5.50E-205 | 723.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029883.t1 | Q9LZ03 | 70.0 | 427 | 78 | 3 | 1 | 377 | 1 | 427 | 2.7e-160 | 566.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029883.t1 | A0A072VLK1 | 90.4 | 417 | 0 | 1 | 1 | 377 | 1 | 417 | 3.9e-205 | 723.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene63906 | MS.gene029883 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029883.t1 | MTR_1g067040 | 90.408 | 417 | 0 | 1 | 1 | 377 | 1 | 417 | 0.0 | 753 |
| MS.gene029883.t1 | MTR_5g095090 | 36.822 | 258 | 162 | 1 | 116 | 372 | 117 | 374 | 3.51e-60 | 199 |
| MS.gene029883.t1 | MTR_5g095040 | 37.209 | 258 | 161 | 1 | 116 | 372 | 116 | 373 | 5.45e-59 | 196 |
| MS.gene029883.t1 | MTR_5g084590 | 45.588 | 204 | 110 | 1 | 131 | 333 | 71 | 274 | 1.11e-54 | 181 |
| MS.gene029883.t1 | MTR_5g009990 | 36.546 | 249 | 148 | 7 | 133 | 377 | 140 | 382 | 2.47e-51 | 176 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene029883.t1 | AT5G02820 | 74.473 | 427 | 59 | 3 | 1 | 377 | 1 | 427 | 0.0 | 639 |
| MS.gene029883.t1 | AT3G13170 | 41.538 | 260 | 151 | 1 | 116 | 374 | 99 | 358 | 2.61e-63 | 206 |
| MS.gene029883.t1 | AT1G63990 | 37.805 | 246 | 143 | 7 | 136 | 377 | 144 | 383 | 2.17e-53 | 181 |
| MS.gene029883.t1 | AT3G13170 | 39.623 | 159 | 96 | 0 | 116 | 274 | 99 | 257 | 8.97e-31 | 118 |
| MS.gene029883.t1 | AT3G13170 | 39.623 | 159 | 96 | 0 | 116 | 274 | 99 | 257 | 8.97e-31 | 118 |
| MS.gene029883.t1 | AT1G63990 | 41.732 | 127 | 70 | 3 | 136 | 258 | 144 | 270 | 1.56e-28 | 112 |
Find 119 sgRNAs with CRISPR-Local
Find 219 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGAAGATTCTATCGGTTTA+TGG | 0.162339 | 1.4:-53930203 | MS.gene029883:CDS |
| TATGATTGACTGCACCAAAA+TGG | 0.272841 | 1.4:-53930480 | MS.gene029883:CDS |
| ACCCCTAGCCACTTAATATC+AGG | 0.295988 | 1.4:+53930134 | None:intergenic |
| ATACAGGCTTTGAGCACTTT+TGG | 0.300599 | 1.4:-53929942 | MS.gene029883:CDS |
| GTGAGAGTTCGTCGAGGGTT+AGG | 0.311404 | 1.4:+53932122 | None:intergenic |
| TTCGTCGAGGGTTAGGGTTT+TGG | 0.320168 | 1.4:+53932129 | None:intergenic |
| AGGGGTTAGGCCTAGTGATT+TGG | 0.323299 | 1.4:-53930117 | MS.gene029883:CDS |
| GATGCAATCTGACACGGTTC+TGG | 0.342688 | 1.4:-53930606 | MS.gene029883:CDS |
| GCCTCAACCGCATCTTCTTC+CGG | 0.342813 | 1.4:-53932154 | MS.gene029883:CDS |
| TGAAGATTCTATCGGTTTAT+GGG | 0.352505 | 1.4:-53930202 | MS.gene029883:CDS |
| CACTCTATCCTCTCCGGTAA+TGG | 0.363607 | 1.4:-53932016 | MS.gene029883:CDS |
| ATGATTGACTGCACCAAAAT+GGG | 0.363708 | 1.4:-53930479 | MS.gene029883:CDS |
| CACCTAATATAGATCGGGTT+GGG | 0.370920 | 1.4:-53930436 | MS.gene029883:CDS |
| TCCCCAACCCGATCTATATT+AGG | 0.379924 | 1.4:+53930434 | None:intergenic |
| TGAAATTGCAGCAGCAAGAT+TGG | 0.388918 | 1.4:-53929887 | MS.gene029883:CDS |
| AGAACAATCCGGTCAAGTTC+AGG | 0.393447 | 1.4:+53931944 | None:intergenic |
| CTGAAGATAGATTCTACAAC+AGG | 0.396021 | 1.4:-53930349 | MS.gene029883:CDS |
| ATCTTGCTGCTGCAATTTCA+AGG | 0.396218 | 1.4:+53929890 | None:intergenic |
| AACGTTGTTGCGGCGGAGAA+AGG | 0.397049 | 1.4:-53930542 | MS.gene029883:CDS |
| ATTCTATCGGTTTATGGGTG+TGG | 0.398853 | 1.4:-53930197 | MS.gene029883:CDS |
| TGATGCTCTGTTCATTCTCT+TGG | 0.400816 | 1.4:-53930402 | MS.gene029883:CDS |
| ATATTAAGTGGCTAGGGGTT+AGG | 0.407669 | 1.4:-53930130 | MS.gene029883:CDS |
| ATCGAATGCGAATCCATTAC+CGG | 0.421565 | 1.4:+53932003 | None:intergenic |
| TAAGCAGAAGGCTGAGATAC+AGG | 0.422038 | 1.4:-53929958 | MS.gene029883:CDS |
| TGCTCTGTTCATTCTCTTGG+TGG | 0.424477 | 1.4:-53930399 | MS.gene029883:CDS |
| ACAAGATACCAGAGCAGTGC+AGG | 0.427228 | 1.4:-53930088 | MS.gene029883:CDS |
| CTGTCCACAAGCGCGAGAAC+TGG | 0.427662 | 1.4:+53930239 | None:intergenic |
| CCCCTGATATTAAGTGGCTA+GGG | 0.427834 | 1.4:-53930136 | MS.gene029883:CDS |
| GATAGAATCTTCAATCCATA+AGG | 0.428102 | 1.4:+53930212 | None:intergenic |
| GATGATGTTTCGTGCATGTT+GGG | 0.433297 | 1.4:-53930584 | MS.gene029883:CDS |
| GCGGAGAAAGGGGTCGTTGT+AGG | 0.434989 | 1.4:-53930530 | MS.gene029883:CDS |
| AACAGCCTCGTTGAAACATC+TGG | 0.442150 | 1.4:+53930293 | None:intergenic |
| TGAGAGTTCGTCGAGGGTTA+GGG | 0.445219 | 1.4:+53932123 | None:intergenic |
| CGCTACTTCGCGGCAGGTGA+AGG | 0.446632 | 1.4:+53932096 | None:intergenic |
| TTTAAGGATTTCGAGGATGA+TGG | 0.449187 | 1.4:+53932186 | None:intergenic |
| ATTTCGAGGATGATGGAGTC+TGG | 0.453963 | 1.4:+53932193 | None:intergenic |
| TGCATAATCGTGACGGCGAA+GGG | 0.456332 | 1.4:-53930320 | MS.gene029883:CDS |
| ACGTTGTTGCGGCGGAGAAA+GGG | 0.460122 | 1.4:-53930541 | MS.gene029883:CDS |
| ATTGGTAGCCTGCACTGCTC+TGG | 0.463608 | 1.4:+53930080 | None:intergenic |
| TTCTATCGGTTTATGGGTGT+GGG | 0.467056 | 1.4:-53930196 | MS.gene029883:CDS |
| AAGGGGAGGATTTCGTCGGT+TGG | 0.471794 | 1.4:+53932232 | None:intergenic |
| TTGATATCCTGCTCGGTCAT+TGG | 0.473998 | 1.4:+53930062 | None:intergenic |
| GTTCATTCTCTTGGTGGAGA+AGG | 0.477468 | 1.4:-53930393 | MS.gene029883:CDS |
| GGTTGAGGAATTGACATTGA+TGG | 0.478009 | 1.4:-53929988 | MS.gene029883:CDS |
| GACTGCACCAAAATGGGGAT+GGG | 0.480616 | 1.4:-53930473 | MS.gene029883:CDS |
| GGATGATGTTTCGTGCATGT+TGG | 0.486242 | 1.4:-53930585 | MS.gene029883:CDS |
| CTTGTGGACAGCGACCCTTA+TGG | 0.486376 | 1.4:-53930227 | MS.gene029883:CDS |
| TTTATGTTCCTGAACTTGAC+CGG | 0.502463 | 1.4:-53931952 | MS.gene029883:CDS |
| TGACTACCCCTGATATTAAG+TGG | 0.511737 | 1.4:-53930142 | MS.gene029883:CDS |
| GAAGAATCCTGGTTGGGTTG+AGG | 0.514047 | 1.4:-53930003 | MS.gene029883:CDS |
| ATGCATAATCGTGACGGCGA+AGG | 0.514747 | 1.4:-53930321 | MS.gene029883:CDS |
| GTTGCCAGTTCTCGCGCTTG+TGG | 0.515247 | 1.4:-53930243 | MS.gene029883:CDS |
| CGATTCCACCTAATATAGAT+CGG | 0.515727 | 1.4:-53930442 | MS.gene029883:CDS |
| TCCGGAAGAAGATGCGGTTG+AGG | 0.516716 | 1.4:+53932153 | None:intergenic |
| TGTGAAGAAGAATCCTGGTT+GGG | 0.517615 | 1.4:-53930009 | MS.gene029883:CDS |
| TCCAGTCTTGATATCCTGCT+CGG | 0.520038 | 1.4:+53930055 | None:intergenic |
| ATCGCTCACTCTATCCTCTC+CGG | 0.521976 | 1.4:-53932022 | MS.gene029883:CDS |
| CTGCACCAAAATGGGGATGG+GGG | 0.528605 | 1.4:-53930471 | MS.gene029883:CDS |
| TTATGGATTGAAGATTCTAT+CGG | 0.530837 | 1.4:-53930210 | MS.gene029883:CDS |
| AGATTCGATGTTGGATTGAA+CGG | 0.532226 | 1.4:+53932057 | None:intergenic |
| GTTGGATTGAACGGAGGAGA+GGG | 0.532797 | 1.4:+53932066 | None:intergenic |
| ACTGCACCAAAATGGGGATG+GGG | 0.534550 | 1.4:-53930472 | MS.gene029883:CDS |
| GAGATCCGCTACTTCGCGGC+AGG | 0.537627 | 1.4:+53932090 | None:intergenic |
| ACAGTCCCAATATTCGCAAA+AGG | 0.539022 | 1.4:+53931899 | None:intergenic |
| ACCGAGCAGGATATCAAGAC+TGG | 0.540146 | 1.4:-53930056 | MS.gene029883:CDS |
| CCCCTAGCCACTTAATATCA+GGG | 0.540293 | 1.4:+53930135 | None:intergenic |
| TTTCGTCGGTTGGTTCTGTA+CGG | 0.542337 | 1.4:+53932242 | None:intergenic |
| ACCCCTGATATTAAGTGGCT+AGG | 0.544777 | 1.4:-53930137 | MS.gene029883:CDS |
| CTTCACCTGCCGCGAAGTAG+CGG | 0.551439 | 1.4:-53932095 | MS.gene029883:CDS |
| GTCAATTCCTCAACCCAACC+AGG | 0.551624 | 1.4:+53929996 | None:intergenic |
| GTTCTTGAGGAAGATGAAGA+TGG | 0.552392 | 1.4:-53930273 | MS.gene029883:CDS |
| GATTCCACCTAATATAGATC+GGG | 0.553185 | 1.4:-53930441 | MS.gene029883:CDS |
| ATAGAATCTTCAATCCATAA+GGG | 0.554921 | 1.4:+53930213 | None:intergenic |
| ACTTGACCGGATTGTTCTCA+AGG | 0.558777 | 1.4:-53931939 | MS.gene029883:CDS |
| TTCAAGCCTCAACGTTGTTG+CGG | 0.559251 | 1.4:-53930552 | MS.gene029883:CDS |
| TGACTGCACCAAAATGGGGA+TGG | 0.560734 | 1.4:-53930474 | MS.gene029883:CDS |
| GAGAACGAGAGATTCGATGT+TGG | 0.561893 | 1.4:+53932048 | None:intergenic |
| CGTTGTTGCGGCGGAGAAAG+GGG | 0.562324 | 1.4:-53930540 | MS.gene029883:CDS |
| ATTTATCCTTGAGAACAATC+CGG | 0.564200 | 1.4:+53931933 | None:intergenic |
| TTTCAACGAGGCTGTTCTTG+AGG | 0.567538 | 1.4:-53930286 | MS.gene029883:CDS |
| CCACCTAATATAGATCGGGT+TGG | 0.567707 | 1.4:-53930437 | MS.gene029883:CDS |
| TTTGAAGGGGAGGATTTCGT+CGG | 0.567861 | 1.4:+53932228 | None:intergenic |
| GGACGCAGCTTATATGAGGT+TGG | 0.568577 | 1.4:-53930372 | MS.gene029883:CDS |
| GGGAGAGATCCGCTACTTCG+CGG | 0.569666 | 1.4:+53932086 | None:intergenic |
| CAAGACTGGAAAGGACATGT+TGG | 0.571239 | 1.4:-53930042 | MS.gene029883:CDS |
| ACCTAATATAGATCGGGTTG+GGG | 0.576207 | 1.4:-53930435 | MS.gene029883:CDS |
| TCTTGCTGCTGCAATTTCAA+GGG | 0.578026 | 1.4:+53929891 | None:intergenic |
| AAGCCTCAACGTTGTTGCGG+CGG | 0.580936 | 1.4:-53930549 | MS.gene029883:CDS |
| CAGGCTACCAATGACCGAGC+AGG | 0.581401 | 1.4:-53930069 | MS.gene029883:CDS |
| GCTACTTCGCGGCAGGTGAA+GGG | 0.581561 | 1.4:+53932097 | None:intergenic |
| CCAACCCGATCTATATTAGG+TGG | 0.582053 | 1.4:+53930437 | None:intergenic |
| GACTGGAAAGGACATGTTGG+AGG | 0.585640 | 1.4:-53930039 | MS.gene029883:CDS |
| TCTCCGCCGCAACAACGTTG+AGG | 0.587650 | 1.4:+53930546 | None:intergenic |
| TTCGCCGTCACGATTATGCA+TGG | 0.590250 | 1.4:+53930323 | None:intergenic |
| AGAAGGACGCAGCTTATATG+AGG | 0.592803 | 1.4:-53930376 | MS.gene029883:CDS |
| AATATTCGCAAAAGGACGGA+TGG | 0.601224 | 1.4:+53931907 | None:intergenic |
| TCCCAATATTCGCAAAAGGA+CGG | 0.603167 | 1.4:+53931903 | None:intergenic |
| AGAAAGGGGTCGTTGTAGGA+AGG | 0.603795 | 1.4:-53930526 | MS.gene029883:CDS |
| TTGTACTTGTCCAAATCACT+AGG | 0.606074 | 1.4:+53930107 | None:intergenic |
| TTTGGTTCCGGAAGAAGATG+CGG | 0.606729 | 1.4:+53932147 | None:intergenic |
| TTGTGAAGAAGAATCCTGGT+TGG | 0.609900 | 1.4:-53930010 | MS.gene029883:CDS |
| TGCACCAAAATGGGGATGGG+GGG | 0.611378 | 1.4:-53930470 | MS.gene029883:CDS |
| TGTTGGATTGAACGGAGGAG+AGG | 0.618769 | 1.4:+53932065 | None:intergenic |
| GATGGTTAAGACTAAGCAGA+AGG | 0.623914 | 1.4:-53929970 | MS.gene029883:CDS |
| CGTCGGTTGGTTCTGTACGG+CGG | 0.630343 | 1.4:+53932245 | None:intergenic |
| CCCTAGCCACTTAATATCAG+GGG | 0.633916 | 1.4:+53930136 | None:intergenic |
| GCAGGATATCAAGACTGGAA+AGG | 0.636659 | 1.4:-53930051 | MS.gene029883:CDS |
| GGGAAGTGAGAGTTCGTCGA+GGG | 0.637315 | 1.4:+53932117 | None:intergenic |
| CCCTGATATTAAGTGGCTAG+GGG | 0.641428 | 1.4:-53930135 | MS.gene029883:CDS |
| GAATCAGATGCAATCTGACA+CGG | 0.645835 | 1.4:-53930612 | MS.gene029883:intron |
| TTCGATGTTGGATTGAACGG+AGG | 0.651484 | 1.4:+53932060 | None:intergenic |
| GCATAATCGTGACGGCGAAG+GGG | 0.651508 | 1.4:-53930319 | MS.gene029883:CDS |
| GTTTCCATGCATAATCGTGA+CGG | 0.664594 | 1.4:-53930327 | MS.gene029883:CDS |
| ATGCGAATCCATTACCGGAG+AGG | 0.684861 | 1.4:+53932008 | None:intergenic |
| TGATTGACTGCACCAAAATG+GGG | 0.696978 | 1.4:-53930478 | MS.gene029883:CDS |
| TGATTCGCAGCAGAACGAGA+CGG | 0.697199 | 1.4:+53931977 | None:intergenic |
| AGTCAAGTGAGAACTGTCGT+AGG | 0.701444 | 1.4:+53930160 | None:intergenic |
| AGGGAAGTGAGAGTTCGTCG+AGG | 0.743719 | 1.4:+53932116 | None:intergenic |
| GGCAGCCAGATGTTTCAACG+AGG | 0.788183 | 1.4:-53930298 | MS.gene029883:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | GTTCAATTATTTAATTAAAT+TGG | + | chr1.4:53931497-53931516 | None:intergenic | 10.0% |
| !! | TTTAAATTTAGTATTACTTT+CGG | - | chr1.4:53930403-53930422 | MS.gene029883:CDS | 10.0% |
| !! | TACTAGATAAAATGAAAATT+AGG | - | chr1.4:53930758-53930777 | MS.gene029883:intron | 15.0% |
| !! | TTAGTCATAATATAAGAAAA+TGG | - | chr1.4:53930591-53930610 | MS.gene029883:CDS | 15.0% |
| !!! | AAGTTGATATATTCTATAAT+AGG | - | chr1.4:53930835-53930854 | MS.gene029883:intron | 15.0% |
| !!! | AGTTGATATATTCTATAATA+GGG | - | chr1.4:53930836-53930855 | MS.gene029883:intron | 15.0% |
| !!! | ATTTTTAACAAGGATAATTT+AGG | - | chr1.4:53931268-53931287 | MS.gene029883:intron | 15.0% |
| !!! | TAATTTACCTTTTAAAAACA+TGG | - | chr1.4:53930874-53930893 | MS.gene029883:intron | 15.0% |
| !!! | TTGTTATGATTTTATTTTGT+TGG | - | chr1.4:53931439-53931458 | MS.gene029883:intron | 15.0% |
| !! | AAAATGAAAATTAGGTACTT+AGG | - | chr1.4:53930766-53930785 | MS.gene029883:intron | 20.0% |
| !! | AAATGAAAATTAGGTACTTA+GGG | - | chr1.4:53930767-53930786 | MS.gene029883:intron | 20.0% |
| !! | AATTAAACATTGCAATTAGT+GGG | - | chr1.4:53931029-53931048 | MS.gene029883:intron | 20.0% |
| !! | CTTGTTAAAAATAACTTACT+AGG | + | chr1.4:53931260-53931279 | None:intergenic | 20.0% |
| !! | GTTGATATATTCTATAATAG+GGG | - | chr1.4:53930837-53930856 | MS.gene029883:intron | 20.0% |
| !! | TAATTAAACATTGCAATTAG+TGG | - | chr1.4:53931028-53931047 | MS.gene029883:intron | 20.0% |
| !! | TTAAAAGTTGTTGTATGTAT+AGG | + | chr1.4:53930929-53930948 | None:intergenic | 20.0% |
| !!! | CTAGTAAGTTATTTTTAACA+AGG | - | chr1.4:53931258-53931277 | MS.gene029883:intron | 20.0% |
| !!! | GATTTTAACAAAATAACTGA+GGG | - | chr1.4:53931290-53931309 | MS.gene029883:intron | 20.0% |
| ! | AAACTGAACGAAATTGAAAA+CGG | - | chr1.4:53931222-53931241 | MS.gene029883:intron | 25.0% |
| ! | AGATTCACAATTAAATTCAG+TGG | + | chr1.4:53931153-53931172 | None:intergenic | 25.0% |
| ! | ATAGAATCTTCAATCCATAA+GGG | + | chr1.4:53931936-53931955 | None:intergenic | 25.0% |
| !! | GGAGACATTTAAAGTTATTT+AGG | + | chr1.4:53931476-53931495 | None:intergenic | 25.0% |
| !! | TTATGGATTGAAGATTCTAT+CGG | - | chr1.4:53931936-53931955 | MS.gene029883:CDS | 25.0% |
| !!! | AAGAGAACCATGTTTTTAAA+AGG | + | chr1.4:53930884-53930903 | None:intergenic | 25.0% |
| !!! | GGATTTTAACAAAATAACTG+AGG | - | chr1.4:53931289-53931308 | MS.gene029883:intron | 25.0% |
| AAGTTGTTGTATGTATAGGA+TGG | + | chr1.4:53930925-53930944 | None:intergenic | 30.0% | |
| AGAGTAAATAGCTTCATAGT+CGG | + | chr1.4:53930479-53930498 | None:intergenic | 30.0% | |
| ATTTATCCTTGAGAACAATC+CGG | + | chr1.4:53930216-53930235 | None:intergenic | 30.0% | |
| GATAGAATCTTCAATCCATA+AGG | + | chr1.4:53931937-53931956 | None:intergenic | 30.0% | |
| TGCGAGATATTTGATGAAAT+AGG | - | chr1.4:53931376-53931395 | MS.gene029883:intron | 30.0% | |
| ! | AGTATTACTTTCGGTTTGTT+TGG | - | chr1.4:53930412-53930431 | MS.gene029883:CDS | 30.0% |
| !! | TCACCTTTGATTTGAAATGT+CGG | - | chr1.4:53930718-53930737 | MS.gene029883:intron | 30.0% |
| !! | TGAAGATTCTATCGGTTTAT+GGG | - | chr1.4:53931944-53931963 | MS.gene029883:CDS | 30.0% |
| !! | TTAGGTTTTTAAGGATTTCG+AGG | + | chr1.4:53929970-53929989 | None:intergenic | 30.0% |
| !! | TTGAAGATTCTATCGGTTTA+TGG | - | chr1.4:53931943-53931962 | MS.gene029883:CDS | 30.0% |
| !!! | GGTTTGAGTTTGTTTTTGAA+GGG | + | chr1.4:53929935-53929954 | None:intergenic | 30.0% |
| !!! | GTTTGAGTTTGTTTTTGAAG+GGG | + | chr1.4:53929934-53929953 | None:intergenic | 30.0% |
| !!! | TGGTTTGAGTTTGTTTTTGA+AGG | + | chr1.4:53929936-53929955 | None:intergenic | 30.0% |
| !!! | TTGAGGCTTTTAGGTTTTTA+AGG | + | chr1.4:53929979-53929998 | None:intergenic | 30.0% |
| AATATCTCGCATTTCATCCT+AGG | + | chr1.4:53931367-53931386 | None:intergenic | 35.0% | |
| AGACACTATACTAACACACA+CGG | + | chr1.4:53930633-53930652 | None:intergenic | 35.0% | |
| AGATTCGATGTTGGATTGAA+CGG | + | chr1.4:53930092-53930111 | None:intergenic | 35.0% | |
| ATGATTGACTGCACCAAAAT+GGG | - | chr1.4:53931667-53931686 | MS.gene029883:intron | 35.0% | |
| CGATTCCACCTAATATAGAT+CGG | - | chr1.4:53931704-53931723 | MS.gene029883:intron | 35.0% | |
| CTGAAGATAGATTCTACAAC+AGG | - | chr1.4:53931797-53931816 | MS.gene029883:intron | 35.0% | |
| GAAAATTAGGTACTTAGGGT+CGG | - | chr1.4:53930771-53930790 | MS.gene029883:intron | 35.0% | |
| GAGTAAATAGCTTCATAGTC+GGG | + | chr1.4:53930478-53930497 | None:intergenic | 35.0% | |
| GATTCCACCTAATATAGATC+GGG | - | chr1.4:53931705-53931724 | MS.gene029883:intron | 35.0% | |
| TATACGACTGGTGATTGATT+GGG | - | chr1.4:53930518-53930537 | MS.gene029883:CDS | 35.0% | |
| TATGATTGACTGCACCAAAA+TGG | - | chr1.4:53931666-53931685 | MS.gene029883:intron | 35.0% | |
| TGAACGAAATTGAAAACGGT+GGG | - | chr1.4:53931226-53931245 | MS.gene029883:intron | 35.0% | |
| TGCTGTTAAGAGACATCAAT+GGG | - | chr1.4:53931074-53931093 | MS.gene029883:intron | 35.0% | |
| TGTTCAATACTGACACAGTT+TGG | - | chr1.4:53930686-53930705 | MS.gene029883:intron | 35.0% | |
| TTATACGACTGGTGATTGAT+TGG | - | chr1.4:53930517-53930536 | MS.gene029883:CDS | 35.0% | |
| TTGTACTTGTCCAAATCACT+AGG | + | chr1.4:53932042-53932061 | None:intergenic | 35.0% | |
| TTTAAGGATTTCGAGGATGA+TGG | + | chr1.4:53929963-53929982 | None:intergenic | 35.0% | |
| TTTATGTTCCTGAACTTGAC+CGG | - | chr1.4:53930194-53930213 | MS.gene029883:CDS | 35.0% | |
| ! | ATTCACCAGCTTTGTCTTAA+AGG | - | chr1.4:53930307-53930326 | MS.gene029883:CDS | 35.0% |
| ! | GATTTTGTGAAGAAGAATCC+TGG | - | chr1.4:53932132-53932151 | MS.gene029883:CDS | 35.0% |
| ! | TTCACCAGCTTTGTCTTAAA+GGG | - | chr1.4:53930308-53930327 | MS.gene029883:CDS | 35.0% |
| ! | TTGATTCGATGTTATACGAC+TGG | - | chr1.4:53930506-53930525 | MS.gene029883:CDS | 35.0% |
| ! | TTGCTGTTAAGAGACATCAA+TGG | - | chr1.4:53931073-53931092 | MS.gene029883:intron | 35.0% |
| ! | TTTCACAAGTGTTTTCATCG+TGG | + | chr1.4:53931199-53931218 | None:intergenic | 35.0% |
| ! | TTTGAAATGTCGGTGCTTAA+TGG | - | chr1.4:53930728-53930747 | MS.gene029883:intron | 35.0% |
| !! | ACTTTCGGTTTGTTTGGTTT+TGG | - | chr1.4:53930418-53930437 | MS.gene029883:CDS | 35.0% |
| AATATTCGCAAAAGGACGGA+TGG | + | chr1.4:53930242-53930261 | None:intergenic | 40.0% | |
| ACAAGAACAAAACCTGATCC+TGG | + | chr1.4:53930381-53930400 | None:intergenic | 40.0% | |
| ACAGTCCCAATATTCGCAAA+AGG | + | chr1.4:53930250-53930269 | None:intergenic | 40.0% | |
| ATATTAAGTGGCTAGGGGTT+AGG | - | chr1.4:53932016-53932035 | MS.gene029883:CDS | 40.0% | |
| ATCGAATGCGAATCCATTAC+CGG | + | chr1.4:53930146-53930165 | None:intergenic | 40.0% | |
| ATCTTGCTGCTGCAATTTCA+AGG | + | chr1.4:53932259-53932278 | None:intergenic | 40.0% | |
| CACCTAATATAGATCGGGTT+GGG | - | chr1.4:53931710-53931729 | MS.gene029883:intron | 40.0% | |
| CTGAACGAAATTGAAAACGG+TGG | - | chr1.4:53931225-53931244 | MS.gene029883:intron | 40.0% | |
| GAACGAAATTGAAAACGGTG+GGG | - | chr1.4:53931227-53931246 | MS.gene029883:intron | 40.0% | |
| GAATCAGATGCAATCTGACA+CGG | - | chr1.4:53931534-53931553 | MS.gene029883:intron | 40.0% | |
| GAGTATCTGACCACAAAAGT+AGG | + | chr1.4:53931320-53931339 | None:intergenic | 40.0% | |
| GATGATGTTTCGTGCATGTT+GGG | - | chr1.4:53931562-53931581 | MS.gene029883:intron | 40.0% | |
| GATGGTTAAGACTAAGCAGA+AGG | - | chr1.4:53932176-53932195 | MS.gene029883:CDS | 40.0% | |
| GGAAAACTGCTATTACTGCT+AGG | - | chr1.4:53930272-53930291 | MS.gene029883:CDS | 40.0% | |
| GGTTGAGGAATTGACATTGA+TGG | - | chr1.4:53932158-53932177 | MS.gene029883:CDS | 40.0% | |
| GTTAAGAGACATCAATGGGT+GGG | - | chr1.4:53931078-53931097 | MS.gene029883:intron | 40.0% | |
| GTTCTTGAGGAAGATGAAGA+TGG | - | chr1.4:53931873-53931892 | MS.gene029883:intron | 40.0% | |
| GTTTCCATGCATAATCGTGA+CGG | - | chr1.4:53931819-53931838 | MS.gene029883:intron | 40.0% | |
| TACTGACACAGTTTGGACAT+CGG | - | chr1.4:53930693-53930712 | MS.gene029883:intron | 40.0% | |
| TACTGATGTTAAGCTCTTCC+AGG | - | chr1.4:53930360-53930379 | MS.gene029883:CDS | 40.0% | |
| TCCCAATATTCGCAAAAGGA+CGG | + | chr1.4:53930246-53930265 | None:intergenic | 40.0% | |
| TCTCTTAACAGCAACTTCCT+TGG | + | chr1.4:53931067-53931086 | None:intergenic | 40.0% | |
| TCTTGCTGCTGCAATTTCAA+GGG | + | chr1.4:53932258-53932277 | None:intergenic | 40.0% | |
| TGAAATTGCAGCAGCAAGAT+TGG | - | chr1.4:53932259-53932278 | MS.gene029883:CDS | 40.0% | |
| TGACTACCCCTGATATTAAG+TGG | - | chr1.4:53932004-53932023 | MS.gene029883:CDS | 40.0% | |
| TGATGCTCTGTTCATTCTCT+TGG | - | chr1.4:53931744-53931763 | MS.gene029883:intron | 40.0% | |
| TGATTGACTGCACCAAAATG+GGG | - | chr1.4:53931668-53931687 | MS.gene029883:intron | 40.0% | |
| TGTCTCCATAGACCATTACA+TGG | + | chr1.4:53931114-53931133 | None:intergenic | 40.0% | |
| TGTGAAGAAGAATCCTGGTT+GGG | - | chr1.4:53932137-53932156 | MS.gene029883:CDS | 40.0% | |
| TGTTAAGAGACATCAATGGG+TGG | - | chr1.4:53931077-53931096 | MS.gene029883:intron | 40.0% | |
| TTAAGAGACATCAATGGGTG+GGG | - | chr1.4:53931079-53931098 | MS.gene029883:intron | 40.0% | |
| TTGTGAAGAAGAATCCTGGT+TGG | - | chr1.4:53932136-53932155 | MS.gene029883:CDS | 40.0% | |
| ! | ACCTAATATAGATCGGGTTG+GGG | - | chr1.4:53931711-53931730 | MS.gene029883:intron | 40.0% |
| ! | ATCCGTCCTTTTGCGAATAT+TGG | - | chr1.4:53930241-53930260 | MS.gene029883:CDS | 40.0% |
| ! | GCACCGACATTTCAAATCAA+AGG | + | chr1.4:53930724-53930743 | None:intergenic | 40.0% |
| ! | TCCGTCCTTTTGCGAATATT+GGG | - | chr1.4:53930242-53930261 | MS.gene029883:CDS | 40.0% |
| !! | AGGTTGATTTTCAGCGACAA+TGG | - | chr1.4:53931640-53931659 | MS.gene029883:intron | 40.0% |
| !! | ATTCTATCGGTTTATGGGTG+TGG | - | chr1.4:53931949-53931968 | MS.gene029883:CDS | 40.0% |
| !! | GAATCCCTTTAAGACAAAGC+TGG | + | chr1.4:53930315-53930334 | None:intergenic | 40.0% |
| !! | TGAGGGTAAACCTACTTTTG+TGG | - | chr1.4:53931307-53931326 | MS.gene029883:intron | 40.0% |
| !! | TTCTATCGGTTTATGGGTGT+GGG | - | chr1.4:53931950-53931969 | MS.gene029883:CDS | 40.0% |
| !!! | ATACAGGCTTTGAGCACTTT+TGG | - | chr1.4:53932204-53932223 | MS.gene029883:CDS | 40.0% |
| !!! | TGAGTTTGTTTTTGAAGGGG+AGG | + | chr1.4:53929931-53929950 | None:intergenic | 40.0% |
| AACAGCCTCGTTGAAACATC+TGG | + | chr1.4:53931856-53931875 | None:intergenic | 45.0% | |
| ACCCCTAGCCACTTAATATC+AGG | + | chr1.4:53932015-53932034 | None:intergenic | 45.0% | |
| ACCCCTGATATTAAGTGGCT+AGG | - | chr1.4:53932009-53932028 | MS.gene029883:CDS | 45.0% | |
| ACTTGACCGGATTGTTCTCA+AGG | - | chr1.4:53930207-53930226 | MS.gene029883:CDS | 45.0% | |
| AGAACAATCCGGTCAAGTTC+AGG | + | chr1.4:53930205-53930224 | None:intergenic | 45.0% | |
| AGAAGGACGCAGCTTATATG+AGG | - | chr1.4:53931770-53931789 | MS.gene029883:intron | 45.0% | |
| AGTCAAGTGAGAACTGTCGT+AGG | + | chr1.4:53931989-53932008 | None:intergenic | 45.0% | |
| CAAGACTGGAAAGGACATGT+TGG | - | chr1.4:53932104-53932123 | MS.gene029883:CDS | 45.0% | |
| CAGCACCATGTAATGGTCTA+TGG | - | chr1.4:53931106-53931125 | MS.gene029883:intron | 45.0% | |
| CCAACCCGATCTATATTAGG+TGG | + | chr1.4:53931712-53931731 | None:intergenic | 45.0% | |
| CCACCTAATATAGATCGGGT+TGG | - | chr1.4:53931709-53931728 | MS.gene029883:intron | 45.0% | |
| CCCCTAGCCACTTAATATCA+GGG | + | chr1.4:53932014-53932033 | None:intergenic | 45.0% | |
| CCCCTGATATTAAGTGGCTA+GGG | - | chr1.4:53932010-53932029 | MS.gene029883:CDS | 45.0% | |
| CCCTAGCCACTTAATATCAG+GGG | + | chr1.4:53932013-53932032 | None:intergenic | 45.0% | |
| CCCTGATATTAAGTGGCTAG+GGG | - | chr1.4:53932011-53932030 | MS.gene029883:CDS | 45.0% | |
| GAGAACGAGAGATTCGATGT+TGG | + | chr1.4:53930101-53930120 | None:intergenic | 45.0% | |
| GCAGGATATCAAGACTGGAA+AGG | - | chr1.4:53932095-53932114 | MS.gene029883:CDS | 45.0% | |
| GGATGATGTTTCGTGCATGT+TGG | - | chr1.4:53931561-53931580 | MS.gene029883:intron | 45.0% | |
| GTGGGTTTAGTGTCATACCA+AGG | - | chr1.4:53931047-53931066 | MS.gene029883:intron | 45.0% | |
| GTTCATTCTCTTGGTGGAGA+AGG | - | chr1.4:53931753-53931772 | MS.gene029883:intron | 45.0% | |
| TAAGCAGAAGGCTGAGATAC+AGG | - | chr1.4:53932188-53932207 | MS.gene029883:CDS | 45.0% | |
| TCAGCAGCATATGCAACTCA+TGG | + | chr1.4:53930550-53930569 | None:intergenic | 45.0% | |
| TCCAGTCTTGATATCCTGCT+CGG | + | chr1.4:53932094-53932113 | None:intergenic | 45.0% | |
| TCCCCAACCCGATCTATATT+AGG | + | chr1.4:53931715-53931734 | None:intergenic | 45.0% | |
| TGCTCTGTTCATTCTCTTGG+TGG | - | chr1.4:53931747-53931766 | MS.gene029883:intron | 45.0% | |
| TGTTAAGCTCTTCCAGGATC+AGG | - | chr1.4:53930366-53930385 | MS.gene029883:CDS | 45.0% | |
| TGTTCGACACCAACATGTGT+CGG | - | chr1.4:53930654-53930673 | MS.gene029883:intron | 45.0% | |
| TTAGGTACTTAGGGTCGGTT+TGG | - | chr1.4:53930776-53930795 | MS.gene029883:intron | 45.0% | |
| TTCAAGCCTCAACGTTGTTG+CGG | - | chr1.4:53931594-53931613 | MS.gene029883:intron | 45.0% | |
| TTCGATGTTGGATTGAACGG+AGG | + | chr1.4:53930089-53930108 | None:intergenic | 45.0% | |
| TTGATATCCTGCTCGGTCAT+TGG | + | chr1.4:53932087-53932106 | None:intergenic | 45.0% | |
| TTGCGAATATTGGGACTGTG+AGG | - | chr1.4:53930251-53930270 | MS.gene029883:CDS | 45.0% | |
| TTTCAACGAGGCTGTTCTTG+AGG | - | chr1.4:53931860-53931879 | MS.gene029883:intron | 45.0% | |
| TTTGAAGGGGAGGATTTCGT+CGG | + | chr1.4:53929921-53929940 | None:intergenic | 45.0% | |
| ! | AAGATGCGGTTGAGGCTTTT+AGG | + | chr1.4:53929988-53930007 | None:intergenic | 45.0% |
| ! | TTTGGTTCCGGAAGAAGATG+CGG | + | chr1.4:53930002-53930021 | None:intergenic | 45.0% |
| !! | AGGGGGAGATTTTAATGGAG+GGG | - | chr1.4:53930812-53930831 | MS.gene029883:intron | 45.0% |
| !! | ATTTCGAGGATGATGGAGTC+TGG | + | chr1.4:53929956-53929975 | None:intergenic | 45.0% |
| !! | CACATAGTACCGACACATGT+TGG | + | chr1.4:53930666-53930685 | None:intergenic | 45.0% |
| !! | GAGGGGGAGATTTTAATGGA+GGG | - | chr1.4:53930811-53930830 | MS.gene029883:intron | 45.0% |
| !! | TTAGGGTCGGTTTGGTTCAA+TGG | - | chr1.4:53930784-53930803 | MS.gene029883:intron | 45.0% |
| !! | TTTCGTCGGTTGGTTCTGTA+CGG | + | chr1.4:53929907-53929926 | None:intergenic | 45.0% |
| ACAAGATACCAGAGCAGTGC+AGG | - | chr1.4:53932058-53932077 | MS.gene029883:CDS | 50.0% | |
| ACCGAGCAGGATATCAAGAC+TGG | - | chr1.4:53932090-53932109 | MS.gene029883:CDS | 50.0% | |
| ACTGCACCAAAATGGGGATG+GGG | - | chr1.4:53931674-53931693 | MS.gene029883:intron | 50.0% | |
| AGAAAGGGGTCGTTGTAGGA+AGG | - | chr1.4:53931620-53931639 | MS.gene029883:intron | 50.0% | |
| AGATACTCCGCGCTTCTATC+CGG | - | chr1.4:53931332-53931351 | MS.gene029883:intron | 50.0% | |
| AGGGGTTAGGCCTAGTGATT+TGG | - | chr1.4:53932029-53932048 | MS.gene029883:CDS | 50.0% | |
| ATCGCTCACTCTATCCTCTC+CGG | - | chr1.4:53930124-53930143 | MS.gene029883:CDS | 50.0% | |
| ATGCATAATCGTGACGGCGA+AGG | - | chr1.4:53931825-53931844 | MS.gene029883:intron | 50.0% | |
| ATGCGAATCCATTACCGGAG+AGG | + | chr1.4:53930141-53930160 | None:intergenic | 50.0% | |
| CACTCTATCCTCTCCGGTAA+TGG | - | chr1.4:53930130-53930149 | MS.gene029883:CDS | 50.0% | |
| GACTGCACCAAAATGGGGAT+GGG | - | chr1.4:53931673-53931692 | MS.gene029883:intron | 50.0% | |
| GACTGGAAAGGACATGTTGG+AGG | - | chr1.4:53932107-53932126 | MS.gene029883:CDS | 50.0% | |
| GATGCAATCTGACACGGTTC+TGG | - | chr1.4:53931540-53931559 | MS.gene029883:intron | 50.0% | |
| GGACGCAGCTTATATGAGGT+TGG | - | chr1.4:53931774-53931793 | MS.gene029883:intron | 50.0% | |
| GTCAATTCCTCAACCCAACC+AGG | + | chr1.4:53932153-53932172 | None:intergenic | 50.0% | |
| GTTGGATTGAACGGAGGAGA+GGG | + | chr1.4:53930083-53930102 | None:intergenic | 50.0% | |
| TCATCCTAGGTAGTCGATCC+CGG | + | chr1.4:53931354-53931373 | None:intergenic | 50.0% | |
| TGACTGCACCAAAATGGGGA+TGG | - | chr1.4:53931672-53931691 | MS.gene029883:intron | 50.0% | |
| TGAGAGTTCGTCGAGGGTTA+GGG | + | chr1.4:53930026-53930045 | None:intergenic | 50.0% | |
| TGATTCGCAGCAGAACGAGA+CGG | + | chr1.4:53930172-53930191 | None:intergenic | 50.0% | |
| TGCATAATCGTGACGGCGAA+GGG | - | chr1.4:53931826-53931845 | MS.gene029883:intron | 50.0% | |
| TGTTGGATTGAACGGAGGAG+AGG | + | chr1.4:53930084-53930103 | None:intergenic | 50.0% | |
| TTCGCCGTCACGATTATGCA+TGG | + | chr1.4:53931826-53931845 | None:intergenic | 50.0% | |
| ! | AGGGGAGGGGGAGATTTTAA+TGG | - | chr1.4:53930807-53930826 | MS.gene029883:intron | 50.0% |
| ! | GAAGAATCCTGGTTGGGTTG+AGG | - | chr1.4:53932143-53932162 | MS.gene029883:CDS | 50.0% |
| ! | GTTTGGTTCAATGGAGGGGA+GGG | - | chr1.4:53930793-53930812 | MS.gene029883:intron | 50.0% |
| ! | TTCGTCGAGGGTTAGGGTTT+TGG | + | chr1.4:53930020-53930039 | None:intergenic | 50.0% |
| ! | TTTGGTTCAATGGAGGGGAG+GGG | - | chr1.4:53930794-53930813 | MS.gene029883:intron | 50.0% |
| !! | GGAGGGGGAGATTTTAATGG+AGG | - | chr1.4:53930810-53930829 | MS.gene029883:intron | 50.0% |
| !! | GGTCGGTTTGGTTCAATGGA+GGG | - | chr1.4:53930788-53930807 | MS.gene029883:intron | 50.0% |
| !! | GTCGGTTTGGTTCAATGGAG+GGG | - | chr1.4:53930789-53930808 | MS.gene029883:intron | 50.0% |
| !!! | GAGGGTTAGGGTTTTGGTTC+CGG | + | chr1.4:53930014-53930033 | None:intergenic | 50.0% |
| AACGTTGTTGCGGCGGAGAA+AGG | - | chr1.4:53931604-53931623 | MS.gene029883:intron | 55.0% | |
| AAGCCTCAACGTTGTTGCGG+CGG | - | chr1.4:53931597-53931616 | MS.gene029883:intron | 55.0% | |
| AAGGGGAGGATTTCGTCGGT+TGG | + | chr1.4:53929917-53929936 | None:intergenic | 55.0% | |
| ACGTTGTTGCGGCGGAGAAA+GGG | - | chr1.4:53931605-53931624 | MS.gene029883:intron | 55.0% | |
| AGGGAAGTGAGAGTTCGTCG+AGG | + | chr1.4:53930033-53930052 | None:intergenic | 55.0% | |
| CAAAATGGGGATGGGGGGAA+AGG | - | chr1.4:53931681-53931700 | MS.gene029883:intron | 55.0% | |
| CTATCCGGGATCGACTACCT+AGG | - | chr1.4:53931347-53931366 | MS.gene029883:intron | 55.0% | |
| CTGCACCAAAATGGGGATGG+GGG | - | chr1.4:53931675-53931694 | MS.gene029883:intron | 55.0% | |
| CTTGTGGACAGCGACCCTTA+TGG | - | chr1.4:53931919-53931938 | MS.gene029883:CDS | 55.0% | |
| GAGACATCAATGGGTGGGGT+TGG | - | chr1.4:53931083-53931102 | MS.gene029883:intron | 55.0% | |
| GATACTCCGCGCTTCTATCC+GGG | - | chr1.4:53931333-53931352 | MS.gene029883:intron | 55.0% | |
| GCATAATCGTGACGGCGAAG+GGG | - | chr1.4:53931827-53931846 | MS.gene029883:intron | 55.0% | |
| GCCTCAACCGCATCTTCTTC+CGG | - | chr1.4:53929992-53930011 | MS.gene029883:CDS | 55.0% | |
| GGCAGCCAGATGTTTCAACG+AGG | - | chr1.4:53931848-53931867 | MS.gene029883:intron | 55.0% | |
| GGGAAGTGAGAGTTCGTCGA+GGG | + | chr1.4:53930032-53930051 | None:intergenic | 55.0% | |
| GTGAGAGTTCGTCGAGGGTT+AGG | + | chr1.4:53930027-53930046 | None:intergenic | 55.0% | |
| TCCGGAAGAAGATGCGGTTG+AGG | + | chr1.4:53929996-53930015 | None:intergenic | 55.0% | |
| TGCACCAAAATGGGGATGGG+GGG | - | chr1.4:53931676-53931695 | MS.gene029883:intron | 55.0% | |
| TTGGTTCAATGGAGGGGAGG+GGG | - | chr1.4:53930795-53930814 | MS.gene029883:intron | 55.0% | |
| ! | ATTGGTAGCCTGCACTGCTC+TGG | + | chr1.4:53932069-53932088 | None:intergenic | 55.0% |
| ! | CTTTCCCCCCATCCCCATTT+TGG | + | chr1.4:53931683-53931702 | None:intergenic | 55.0% |
| ! | GGGTTGGCAGCACCATGTAA+TGG | - | chr1.4:53931099-53931118 | MS.gene029883:intron | 55.0% |
| ! | GGTTTGGTTCAATGGAGGGG+AGG | - | chr1.4:53930792-53930811 | MS.gene029883:intron | 55.0% |
| !! | GGGTCGGTTTGGTTCAATGG+AGG | - | chr1.4:53930787-53930806 | MS.gene029883:intron | 55.0% |
| CAGGCTACCAATGACCGAGC+AGG | - | chr1.4:53932077-53932096 | MS.gene029883:CDS | 60.0% | |
| CGTTGTTGCGGCGGAGAAAG+GGG | - | chr1.4:53931606-53931625 | MS.gene029883:intron | 60.0% | |
| CTGTCCACAAGCGCGAGAAC+TGG | + | chr1.4:53931910-53931929 | None:intergenic | 60.0% | |
| CTTCACCTGCCGCGAAGTAG+CGG | - | chr1.4:53930051-53930070 | MS.gene029883:CDS | 60.0% | |
| GCGGAGAAAGGGGTCGTTGT+AGG | - | chr1.4:53931616-53931635 | MS.gene029883:intron | 60.0% | |
| GCTACTTCGCGGCAGGTGAA+GGG | + | chr1.4:53930052-53930071 | None:intergenic | 60.0% | |
| GGGAGAGATCCGCTACTTCG+CGG | + | chr1.4:53930063-53930082 | None:intergenic | 60.0% | |
| GTCGATCCCGGATAGAAGCG+CGG | + | chr1.4:53931342-53931361 | None:intergenic | 60.0% | |
| GTTGCCAGTTCTCGCGCTTG+TGG | - | chr1.4:53931903-53931922 | MS.gene029883:CDS | 60.0% | |
| TCTCCGCCGCAACAACGTTG+AGG | + | chr1.4:53931603-53931622 | None:intergenic | 60.0% | |
| !! | CGTCGGTTGGTTCTGTACGG+CGG | + | chr1.4:53929904-53929923 | None:intergenic | 60.0% |
| CGCTACTTCGCGGCAGGTGA+AGG | + | chr1.4:53930053-53930072 | None:intergenic | 65.0% | |
| GAGATCCGCTACTTCGCGGC+AGG | + | chr1.4:53930059-53930078 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 53929881 | 53932287 | 53929881 | ID=MS.gene029883 |
| chr1.4 | mRNA | 53929881 | 53932287 | 53929881 | ID=MS.gene029883.t1;Parent=MS.gene029883 |
| chr1.4 | exon | 53931901 | 53932287 | 53931901 | ID=MS.gene029883.t1.exon1;Parent=MS.gene029883.t1 |
| chr1.4 | CDS | 53931901 | 53932287 | 53931901 | ID=cds.MS.gene029883.t1;Parent=MS.gene029883.t1 |
| chr1.4 | exon | 53929881 | 53930627 | 53929881 | ID=MS.gene029883.t1.exon2;Parent=MS.gene029883.t1 |
| chr1.4 | CDS | 53929881 | 53930627 | 53929881 | ID=cds.MS.gene029883.t1;Parent=MS.gene029883.t1 |
| Gene Sequence |
| Protein sequence |
