Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030769.t1 | XP_003630054.2 | 97.5 | 432 | 11 | 0 | 1 | 432 | 44 | 475 | 4.20E-233 | 817 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030769.t1 | E9L7A5 | 85.2 | 419 | 62 | 0 | 8 | 426 | 55 | 473 | 2.7e-201 | 702.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030769.t1 | G7LAD1 | 97.5 | 432 | 11 | 0 | 1 | 432 | 44 | 475 | 3.0e-233 | 817.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene031869 | MS.gene030769 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030769.t1 | MTR_8g091280 | 97.454 | 432 | 11 | 0 | 1 | 432 | 44 | 475 | 0.0 | 863 |
| MS.gene030769.t1 | MTR_7g106830 | 86.574 | 432 | 55 | 1 | 4 | 432 | 42 | 473 | 0.0 | 764 |
| MS.gene030769.t1 | MTR_1807s0010 | 39.846 | 389 | 230 | 2 | 32 | 419 | 7 | 392 | 1.48e-88 | 275 |
| MS.gene030769.t1 | MTR_3g072670 | 31.026 | 390 | 245 | 10 | 40 | 423 | 72 | 443 | 5.07e-51 | 178 |
| MS.gene030769.t1 | MTR_3g072680 | 30.645 | 372 | 236 | 9 | 59 | 424 | 46 | 401 | 2.40e-49 | 172 |
| MS.gene030769.t1 | MTR_1g087760 | 31.593 | 383 | 226 | 11 | 59 | 423 | 30 | 394 | 1.87e-42 | 154 |
| MS.gene030769.t1 | MTR_4g011820 | 29.661 | 354 | 220 | 10 | 87 | 432 | 62 | 394 | 1.48e-40 | 149 |
| MS.gene030769.t1 | MTR_3g072690 | 29.499 | 339 | 183 | 10 | 59 | 395 | 11 | 295 | 2.12e-36 | 136 |
| MS.gene030769.t1 | MTR_8g061360 | 24.607 | 382 | 253 | 11 | 58 | 420 | 42 | 407 | 2.54e-23 | 101 |
| MS.gene030769.t1 | MTR_2g090615 | 23.377 | 385 | 255 | 14 | 56 | 420 | 46 | 410 | 1.34e-17 | 84.7 |
| MS.gene030769.t1 | MTR_8g101750 | 23.174 | 397 | 270 | 13 | 54 | 427 | 46 | 430 | 3.99e-17 | 83.6 |
| MS.gene030769.t1 | MTR_2g008430 | 24.615 | 325 | 207 | 12 | 58 | 357 | 72 | 383 | 1.68e-16 | 81.6 |
| MS.gene030769.t1 | MTR_8g098930 | 23.295 | 352 | 233 | 15 | 78 | 406 | 80 | 417 | 1.70e-15 | 78.6 |
| MS.gene030769.t1 | MTR_6g463260 | 22.164 | 379 | 261 | 13 | 72 | 429 | 166 | 531 | 2.25e-14 | 75.5 |
| MS.gene030769.t1 | MTR_8g101820 | 22.959 | 392 | 264 | 15 | 54 | 427 | 46 | 417 | 2.10e-12 | 68.9 |
| MS.gene030769.t1 | MTR_4g092620 | 23.385 | 325 | 211 | 10 | 58 | 357 | 91 | 402 | 2.24e-12 | 68.9 |
| MS.gene030769.t1 | MTR_7g079080 | 23.684 | 342 | 232 | 12 | 72 | 396 | 73 | 402 | 7.43e-12 | 67.4 |
| MS.gene030769.t1 | MTR_4g097540 | 20.557 | 287 | 201 | 6 | 110 | 371 | 105 | 389 | 2.18e-11 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene030769.t1 | AT2G22250 | 79.353 | 402 | 83 | 0 | 25 | 426 | 68 | 469 | 0.0 | 674 |
| MS.gene030769.t1 | AT2G22250 | 79.353 | 402 | 83 | 0 | 25 | 426 | 68 | 469 | 0.0 | 674 |
| MS.gene030769.t1 | AT2G22250 | 79.353 | 402 | 83 | 0 | 25 | 426 | 21 | 422 | 0.0 | 674 |
| MS.gene030769.t1 | AT1G77670 | 31.026 | 390 | 245 | 10 | 40 | 423 | 65 | 436 | 6.78e-55 | 188 |
| MS.gene030769.t1 | AT1G80360 | 28.612 | 353 | 224 | 9 | 87 | 432 | 62 | 393 | 3.59e-37 | 140 |
| MS.gene030769.t1 | AT1G80360 | 28.612 | 353 | 224 | 9 | 87 | 432 | 62 | 393 | 3.59e-37 | 140 |
| MS.gene030769.t1 | AT1G80360 | 28.612 | 353 | 224 | 9 | 87 | 432 | 62 | 393 | 3.59e-37 | 140 |
| MS.gene030769.t1 | AT1G80360 | 28.612 | 353 | 224 | 9 | 87 | 432 | 62 | 393 | 3.59e-37 | 140 |
| MS.gene030769.t1 | AT4G28420 | 23.545 | 378 | 262 | 10 | 57 | 419 | 61 | 426 | 2.06e-23 | 102 |
| MS.gene030769.t1 | AT5G36160 | 21.535 | 404 | 289 | 10 | 36 | 421 | 17 | 410 | 9.39e-23 | 100 |
| MS.gene030769.t1 | AT2G24850 | 24.198 | 405 | 263 | 14 | 40 | 420 | 33 | 417 | 1.39e-22 | 99.8 |
| MS.gene030769.t1 | AT2G20610 | 24.021 | 383 | 262 | 10 | 58 | 424 | 68 | 437 | 9.10e-22 | 97.8 |
| MS.gene030769.t1 | AT5G53970 | 22.310 | 381 | 273 | 9 | 53 | 420 | 30 | 400 | 8.06e-20 | 91.3 |
| MS.gene030769.t1 | AT4G28420 | 23.988 | 321 | 209 | 11 | 57 | 355 | 61 | 368 | 1.88e-19 | 90.1 |
| MS.gene030769.t1 | AT2G20610 | 23.647 | 351 | 239 | 10 | 58 | 392 | 68 | 405 | 1.49e-17 | 84.7 |
| MS.gene030769.t1 | AT4G28410 | 22.622 | 389 | 252 | 13 | 58 | 420 | 70 | 435 | 7.84e-17 | 82.8 |
| MS.gene030769.t1 | AT4G23600 | 22.067 | 358 | 225 | 13 | 89 | 420 | 73 | 402 | 9.00e-16 | 79.3 |
| MS.gene030769.t1 | AT4G28410 | 25.287 | 261 | 175 | 8 | 58 | 303 | 70 | 325 | 5.88e-15 | 77.0 |
| MS.gene030769.t1 | AT2G13810 | 25.000 | 344 | 209 | 13 | 84 | 404 | 103 | 420 | 9.36e-15 | 76.3 |
| MS.gene030769.t1 | AT3G61510 | 22.384 | 344 | 239 | 12 | 94 | 420 | 94 | 426 | 3.70e-14 | 74.7 |
| MS.gene030769.t1 | AT1G01480 | 25.688 | 218 | 139 | 6 | 94 | 292 | 95 | 308 | 5.11e-14 | 74.3 |
| MS.gene030769.t1 | AT1G62960 | 23.565 | 331 | 218 | 12 | 85 | 394 | 202 | 518 | 5.55e-14 | 74.3 |
| MS.gene030769.t1 | AT4G23600 | 22.115 | 312 | 217 | 11 | 121 | 420 | 1 | 298 | 2.16e-13 | 71.2 |
| MS.gene030769.t1 | AT4G26200 | 24.186 | 215 | 147 | 5 | 94 | 293 | 102 | 315 | 5.16e-13 | 70.9 |
| MS.gene030769.t1 | AT4G23600 | 21.118 | 322 | 216 | 12 | 89 | 392 | 73 | 374 | 3.43e-11 | 65.1 |
Find 117 sgRNAs with CRISPR-Local
Find 201 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCGGCCAACCTTGCCATTTC+TGG | 0.079416 | 4.3:-9858113 | None:intergenic |
| ATGCAGCAACTCCTGCTTTC+TGG | 0.151985 | 4.3:-9858974 | None:intergenic |
| GCAATTTGTCATAAGCTTAA+AGG | 0.163237 | 4.3:+9857116 | MS.gene030769:CDS |
| TCATTATTCCAGCTCCATTT+TGG | 0.216900 | 4.3:+9858081 | MS.gene030769:CDS |
| CAAGAAGTTTGGGATTTAAA+AGG | 0.233222 | 4.3:-9858178 | None:intergenic |
| AATTCTAATGTTCCAGCATT+AGG | 0.242169 | 4.3:-9857086 | None:intergenic |
| ATTCTAATGTTCCAGCATTA+GGG | 0.292089 | 4.3:-9857085 | None:intergenic |
| TATTGAATTTAGTTCACTTC+AGG | 0.297595 | 4.3:+9858936 | MS.gene030769:intron |
| GCAAAGCTTGTATGCGTTGC+GGG | 0.302503 | 4.3:-9858463 | None:intergenic |
| TCTGGGTAACTGACCCAAAA+TGG | 0.303684 | 4.3:-9858095 | None:intergenic |
| CTTGTTCCAGGGAGTGCATT+TGG | 0.321486 | 4.3:+9859436 | MS.gene030769:CDS |
| CTACAGGTAGCACTTGTTCC+AGG | 0.326666 | 4.3:+9859424 | MS.gene030769:intron |
| GATCAGATTGTTGTTACTAA+TGG | 0.334270 | 4.3:+9857258 | MS.gene030769:CDS |
| CTCAAAATCCGATTCTGAAT+TGG | 0.336223 | 4.3:+9856716 | MS.gene030769:CDS |
| GGAAAAGAAGCTGAGGGATT+TGG | 0.338146 | 4.3:+9859268 | MS.gene030769:CDS |
| AGCAAAGCACCCCAGGCTTC+TGG | 0.348641 | 4.3:+9858307 | MS.gene030769:CDS |
| TATTCTCTACAGCTGCTTGT+AGG | 0.360055 | 4.3:-9859504 | None:intergenic |
| TGGCGGCTTGGATATATTGC+TGG | 0.367266 | 4.3:+9858749 | MS.gene030769:CDS |
| ACAGATCCTGTCGGGTTAGA+TGG | 0.370302 | 4.3:-9858245 | None:intergenic |
| TGCAGCAACTCCTGCTTTCT+GGG | 0.375768 | 4.3:-9858973 | None:intergenic |
| CCGGCAGCCAAGCGAATAAC+AGG | 0.376297 | 4.3:-9856837 | None:intergenic |
| TGTCGATATCTGTTGGATAA+AGG | 0.377700 | 4.3:+9859316 | MS.gene030769:CDS |
| CGGCCAACCTTGCCATTTCT+GGG | 0.386197 | 4.3:-9858112 | None:intergenic |
| ATTGATTTCAGCTCCTATTA+CGG | 0.395214 | 4.3:+9859247 | MS.gene030769:CDS |
| GGGATTTAAAAGGAAATTGT+TGG | 0.397371 | 4.3:-9858168 | None:intergenic |
| CTGCTGTAATAAAATGCTTC+GGG | 0.411183 | 4.3:-9858772 | None:intergenic |
| TTGGGTCAGTTACCCAGAAA+TGG | 0.412108 | 4.3:+9858100 | MS.gene030769:CDS |
| CCTGTTATTCGCTTGGCTGC+CGG | 0.414314 | 4.3:+9856837 | MS.gene030769:CDS |
| AAAGCAGGAGTTGCTGCATT+AGG | 0.419874 | 4.3:+9858978 | MS.gene030769:CDS |
| ATTGAATTTAGTTCACTTCA+GGG | 0.420218 | 4.3:+9858937 | MS.gene030769:intron |
| TGGCGTTCCTGTTATTCGCT+TGG | 0.434147 | 4.3:+9856830 | MS.gene030769:CDS |
| ATGCTGGAACATTAGAATTA+CGG | 0.438442 | 4.3:+9857090 | MS.gene030769:CDS |
| ACTGCTGTAATAAAATGCTT+CGG | 0.441560 | 4.3:-9858773 | None:intergenic |
| GCAATGACGGGTTGGCGGCT+TGG | 0.443014 | 4.3:+9858737 | MS.gene030769:CDS |
| ACCGCGGGTGTATCAAAATC+AGG | 0.445970 | 4.3:-9856864 | None:intergenic |
| ATCAACTTCCAATTCAGAAT+CGG | 0.450108 | 4.3:-9856724 | None:intergenic |
| ACAAGTGCAGCAGAGGTAAG+AGG | 0.450109 | 4.3:-9859544 | None:intergenic |
| CCTTTGCAATGACGGGTTGG+CGG | 0.450458 | 4.3:+9858732 | MS.gene030769:CDS |
| ATTCTCTACAGCTGCTTGTA+GGG | 0.452436 | 4.3:-9859503 | None:intergenic |
| CCGCAGGCCTTTGCAATGAC+GGG | 0.465375 | 4.3:+9858725 | MS.gene030769:intron |
| TAGAGAACGAAGGGATTACT+TGG | 0.471008 | 4.3:+9859049 | MS.gene030769:CDS |
| GTGATTGCAGTTTGCTCACC+GGG | 0.475286 | 4.3:+9857306 | MS.gene030769:CDS |
| CGAATCAACATACCTGACTT+TGG | 0.475879 | 4.3:-9858805 | None:intergenic |
| ACCGCAGGCCTTTGCAATGA+CGG | 0.477256 | 4.3:+9858724 | MS.gene030769:intron |
| TTAGTAACAACAATCTGATC+AGG | 0.481417 | 4.3:-9857255 | None:intergenic |
| AGCTGCTTGTAGGGTGGGAA+GGG | 0.483431 | 4.3:-9859494 | None:intergenic |
| AACAGAACTCTAACTGTGAA+TGG | 0.487843 | 4.3:+9858505 | MS.gene030769:CDS |
| TAGGATACACAGATCCTGTC+GGG | 0.490141 | 4.3:-9858253 | None:intergenic |
| GTCTCTCTGTCGATATCTGT+TGG | 0.490859 | 4.3:+9859309 | MS.gene030769:CDS |
| GTAATAGCGACAGTTCTTGA+AGG | 0.496768 | 4.3:-9856780 | None:intergenic |
| GCCACTGCTCTTGTTCAAGC+TGG | 0.498280 | 4.3:+9856810 | MS.gene030769:CDS |
| CAGCTGCTTGTAGGGTGGGA+AGG | 0.499588 | 4.3:-9859495 | None:intergenic |
| CGTTTCCCAAAATGAGCACC+GGG | 0.499708 | 4.3:+9856658 | None:intergenic |
| CAAGTGCAGCAGAGGTAAGA+GGG | 0.514785 | 4.3:-9859543 | None:intergenic |
| AGTCGGAAAGATCCAAAGTC+AGG | 0.515039 | 4.3:+9858793 | MS.gene030769:CDS |
| GCTTTCTGGGATATACTACT+AGG | 0.517919 | 4.3:-9858960 | None:intergenic |
| TCTACAGCTGCTTGTAGGGT+GGG | 0.517951 | 4.3:-9859499 | None:intergenic |
| GTATAACTTTACCAGAAGCC+TGG | 0.521516 | 4.3:-9858318 | None:intergenic |
| AGTGATTGCAGTTTGCTCAC+CGG | 0.523981 | 4.3:+9857305 | MS.gene030769:CDS |
| TATAACTTTACCAGAAGCCT+GGG | 0.526263 | 4.3:-9858317 | None:intergenic |
| ACGTTTCCCAAAATGAGCAC+CGG | 0.529984 | 4.3:+9856657 | None:intergenic |
| CTCTACAGCTGCTTGTAGGG+TGG | 0.533083 | 4.3:-9859500 | None:intergenic |
| GGAGTTGCTGCATTAGGACT+AGG | 0.535279 | 4.3:+9858984 | MS.gene030769:CDS |
| ACAAGGTATACCCCTAATGC+TGG | 0.536420 | 4.3:+9857074 | MS.gene030769:CDS |
| TTACCCAGAAATGGCAAGGT+TGG | 0.540508 | 4.3:+9858109 | MS.gene030769:CDS |
| TAACTGACCCAAAATGGAGC+TGG | 0.543528 | 4.3:-9858089 | None:intergenic |
| TGTTAAAATATCTGAACCAC+AGG | 0.548557 | 4.3:+9859097 | MS.gene030769:CDS |
| AGGCCTTTGCAATGACGGGT+TGG | 0.554930 | 4.3:+9858729 | MS.gene030769:intron |
| AGATTGTAGCAAAGCACCCC+AGG | 0.557592 | 4.3:+9858300 | MS.gene030769:CDS |
| TTGCATCTTTACCGAAAATG+TGG | 0.558238 | 4.3:+9858482 | MS.gene030769:CDS |
| CAAAGCTTGTATGCGTTGCG+GGG | 0.560240 | 4.3:-9858462 | None:intergenic |
| ACATTACTCACCTCATCTCC+CGG | 0.560555 | 4.3:-9857324 | None:intergenic |
| AGTAGTATATCCCAGAAAGC+AGG | 0.566034 | 4.3:+9858963 | MS.gene030769:CDS |
| TCTTCTGTTCTGCTCCACCC+CGG | 0.567889 | 4.3:-9856676 | None:intergenic |
| GGGATGCCGCATAAGAGATA+CGG | 0.568342 | 4.3:-9859474 | None:intergenic |
| ATTGACGTTGGAAGAATCAC+AGG | 0.568374 | 4.3:-9858143 | None:intergenic |
| ATATCTGTTGGATAAAGGCC+AGG | 0.568797 | 4.3:+9859321 | MS.gene030769:CDS |
| TCGTCACCAAATGCACTCCC+TGG | 0.571993 | 4.3:-9859442 | None:intergenic |
| AAATTGTTGGATATTGACGT+TGG | 0.572136 | 4.3:-9858155 | None:intergenic |
| CCGCCAACCCGTCATTGCAA+AGG | 0.572920 | 4.3:-9858732 | None:intergenic |
| TGTTCACCATCTAACCCGAC+AGG | 0.575722 | 4.3:+9858239 | MS.gene030769:CDS |
| TGTATCAAAATCAGGTTCAC+CGG | 0.576041 | 4.3:-9856856 | None:intergenic |
| TACAGGTAGCACTTGTTCCA+GGG | 0.580306 | 4.3:+9859425 | MS.gene030769:intron |
| GCATTAGGACTAGGCTATGC+CGG | 0.581439 | 4.3:+9858993 | MS.gene030769:CDS |
| ACTAGGCTATGCCGGTGGGG+AGG | 0.582975 | 4.3:+9859001 | MS.gene030769:CDS |
| TGCAAAGCTTGTATGCGTTG+CGG | 0.587218 | 4.3:-9858464 | None:intergenic |
| AGCTAAGCAGAGTATTACTC+AGG | 0.591051 | 4.3:+9857281 | MS.gene030769:CDS |
| AATACCTCGGCAATAACCGC+GGG | 0.593217 | 4.3:-9856879 | None:intergenic |
| TTAGGATACACAGATCCTGT+CGG | 0.593757 | 4.3:-9858254 | None:intergenic |
| AAGAATCACAGGTGTTGCAT+CGG | 0.596920 | 4.3:-9858132 | None:intergenic |
| AGTTTGCTCACCGGGAGATG+AGG | 0.598945 | 4.3:+9857314 | MS.gene030769:CDS |
| GGTAGAAACAGCCTCCCCAC+CGG | 0.605264 | 4.3:-9859012 | None:intergenic |
| ATATTAAACAAGTGCAGCAG+AGG | 0.613245 | 4.3:-9859551 | None:intergenic |
| GAAAGCGTTTAGAGAACGAA+GGG | 0.615579 | 4.3:+9859040 | MS.gene030769:CDS |
| CTATTACGGAAAAGAAGCTG+AGG | 0.615986 | 4.3:+9859261 | MS.gene030769:CDS |
| TATTACGGAAAAGAAGCTGA+GGG | 0.619913 | 4.3:+9859262 | MS.gene030769:CDS |
| TAGGACTAGGCTATGCCGGT+GGG | 0.621853 | 4.3:+9858997 | MS.gene030769:CDS |
| AAGTGCAGCAGAGGTAAGAG+GGG | 0.622530 | 4.3:-9859542 | None:intergenic |
| TGGGGAGGCTGTTTCTACCA+TGG | 0.623436 | 4.3:+9859016 | MS.gene030769:CDS |
| AAATACCTCGGCAATAACCG+CGG | 0.623880 | 4.3:-9856880 | None:intergenic |
| GGGATTAATGCAATTCGTGA+AGG | 0.627742 | 4.3:+9857047 | MS.gene030769:CDS |
| TTCTAATGTTCCAGCATTAG+GGG | 0.630270 | 4.3:-9857084 | None:intergenic |
| TCAGTTACCCAGAAATGGCA+AGG | 0.632651 | 4.3:+9858105 | MS.gene030769:CDS |
| TCCCAAAATGAGCACCGGGG+TGG | 0.635586 | 4.3:+9856662 | None:intergenic |
| TTCTCTAAACGCTTTCACCA+TGG | 0.637703 | 4.3:-9859033 | None:intergenic |
| TACACCCGCGGTTATTGCCG+AGG | 0.640881 | 4.3:+9856875 | MS.gene030769:CDS |
| CAGATATCGACAGAGAGACT+CGG | 0.642319 | 4.3:-9859305 | None:intergenic |
| AAAGCTTGTATGCGTTGCGG+GGG | 0.643467 | 4.3:-9858461 | None:intergenic |
| TTGCATCCGTATCTCTTATG+CGG | 0.655090 | 4.3:+9859468 | MS.gene030769:CDS |
| TTAGGACTAGGCTATGCCGG+TGG | 0.656689 | 4.3:+9858996 | MS.gene030769:CDS |
| GCCAGCTTGAACAAGAGCAG+TGG | 0.668141 | 4.3:-9856811 | None:intergenic |
| GGTTTGACAGCATTAACACG+TGG | 0.682883 | 4.3:-9856759 | None:intergenic |
| CAATTCGTGAAGGATACACA+AGG | 0.683943 | 4.3:+9857057 | MS.gene030769:CDS |
| AGGACTAGGCTATGCCGGTG+GGG | 0.684712 | 4.3:+9858998 | MS.gene030769:CDS |
| TGAAAGCGTTTAGAGAACGA+AGG | 0.691237 | 4.3:+9859039 | MS.gene030769:CDS |
| ATAACTTTACCAGAAGCCTG+GGG | 0.763746 | 4.3:-9858316 | None:intergenic |
| GTTTCCCAAAATGAGCACCG+GGG | 0.831303 | 4.3:+9856659 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCATTATACTATTATTATTT+AGG | + | chr4.3:9857355-9857374 | MS.gene030769:intron | 10.0% |
| !!! | TTAATACTTAATAACATTTT+TGG | - | chr4.3:9857534-9857553 | None:intergenic | 10.0% |
| !! | TAAAATGAGTAAAAGATATA+AGG | - | chr4.3:9857780-9857799 | None:intergenic | 15.0% |
| !!! | ATTTTTTATACGAATATTTC+AGG | + | chr4.3:9858058-9858077 | MS.gene030769:intron | 15.0% |
| !!! | TTATTATTTAGGATAAACAT+CGG | + | chr4.3:9857366-9857385 | MS.gene030769:intron | 15.0% |
| !! | AATAAACTAGAAACAACTTA+TGG | - | chr4.3:9856982-9857001 | None:intergenic | 20.0% |
| !! | AATTCAAATTGAAAATACCT+CGG | - | chr4.3:9856895-9856914 | None:intergenic | 20.0% |
| !! | AGAATAACTATTAAAGGAAT+AGG | - | chr4.3:9859146-9859165 | None:intergenic | 20.0% |
| !! | TTACAGAATTATGTTTGATT+TGG | + | chr4.3:9857991-9858010 | MS.gene030769:intron | 20.0% |
| !!! | AAGGATTTTACAAAAATGAA+AGG | - | chr4.3:9857761-9857780 | None:intergenic | 20.0% |
| !!! | ACTTAATAACATTTTTGGAT+GGG | - | chr4.3:9857529-9857548 | None:intergenic | 20.0% |
| !!! | ATCTCTTCAAGTAAATTTTT+AGG | - | chr4.3:9858275-9858294 | None:intergenic | 20.0% |
| !!! | CTGTATTATATGGTTTTATT+TGG | + | chr4.3:9857153-9857172 | MS.gene030769:intron | 20.0% |
| !!! | TAAAACAGTTTAAAATCATC+AGG | - | chr4.3:9858705-9858724 | None:intergenic | 20.0% |
| !!! | TACTTAATAACATTTTTGGA+TGG | - | chr4.3:9857530-9857549 | None:intergenic | 20.0% |
| !!! | TTAGTTTTATTACTTGTGTA+TGG | + | chr4.3:9857013-9857032 | MS.gene030769:intron | 20.0% |
| ! | AAAATCATCAGGATAAAATC+TGG | - | chr4.3:9858694-9858713 | None:intergenic | 25.0% |
| ! | ACAACTATTAAGATCTTAAG+AGG | - | chr4.3:9858395-9858414 | None:intergenic | 25.0% |
| ! | ACATGGAGAATAACTATTAA+AGG | - | chr4.3:9859152-9859171 | None:intergenic | 25.0% |
| ! | ATGTTCTCTTTCTATCATAA+TGG | + | chr4.3:9858553-9858572 | MS.gene030769:intron | 25.0% |
| ! | TCAAGATAATGCATAGAATA+AGG | - | chr4.3:9858844-9858863 | None:intergenic | 25.0% |
| ! | TGTAGATTATGAAATAAGCA+TGG | + | chr4.3:9858661-9858680 | MS.gene030769:intron | 25.0% |
| ! | TTTGATTGTGCTGTATTATA+TGG | + | chr4.3:9857143-9857162 | MS.gene030769:intron | 25.0% |
| !! | ATTGAATTTAGTTCACTTCA+GGG | + | chr4.3:9858937-9858956 | MS.gene030769:intron | 25.0% |
| !! | TATTGAATTTAGTTCACTTC+AGG | + | chr4.3:9858936-9858955 | MS.gene030769:intron | 25.0% |
| !! | TCTTGACTTTTCAGTAATTT+TGG | - | chr4.3:9858207-9858226 | None:intergenic | 25.0% |
| !! | TTTTGTCATAATGAAAACCT+AGG | + | chr4.3:9857596-9857615 | MS.gene030769:intron | 25.0% |
| !!! | AAAAGTTTTAGCGAAATTGA+TGG | + | chr4.3:9859074-9859093 | MS.gene030769:CDS | 25.0% |
| !!! | TACATTTTACGTTTTTTGAG+AGG | + | chr4.3:9857922-9857941 | MS.gene030769:intron | 25.0% |
| AAATTGTTGGATATTGACGT+TGG | - | chr4.3:9858158-9858177 | None:intergenic | 30.0% | |
| AATTCTAATGTTCCAGCATT+AGG | - | chr4.3:9857089-9857108 | None:intergenic | 30.0% | |
| ACTGCTGTAATAAAATGCTT+CGG | - | chr4.3:9858776-9858795 | None:intergenic | 30.0% | |
| ACTTATGGACATGTTAAAAG+TGG | - | chr4.3:9856967-9856986 | None:intergenic | 30.0% | |
| ATCAACTTCCAATTCAGAAT+CGG | - | chr4.3:9856727-9856746 | None:intergenic | 30.0% | |
| ATGCTGGAACATTAGAATTA+CGG | + | chr4.3:9857090-9857109 | MS.gene030769:CDS | 30.0% | |
| ATGCTTCAATGTATTCAACT+TGG | + | chr4.3:9858360-9858379 | MS.gene030769:intron | 30.0% | |
| ATTCTAATGTTCCAGCATTA+GGG | - | chr4.3:9857088-9857107 | None:intergenic | 30.0% | |
| GATTATGAAATAAGCATGGA+TGG | + | chr4.3:9858665-9858684 | MS.gene030769:intron | 30.0% | |
| GCAATTTGTCATAAGCTTAA+AGG | + | chr4.3:9857116-9857135 | MS.gene030769:CDS | 30.0% | |
| GGGATTTAAAAGGAAATTGT+TGG | - | chr4.3:9858171-9858190 | None:intergenic | 30.0% | |
| GTTTGTATTCAATGAGCAAA+AGG | - | chr4.3:9857837-9857856 | None:intergenic | 30.0% | |
| TAAAATACTGCTAGTATACC+TGG | - | chr4.3:9859342-9859361 | None:intergenic | 30.0% | |
| TCGGTATTTATGCATTGAAT+TGG | + | chr4.3:9857470-9857489 | MS.gene030769:intron | 30.0% | |
| TGGATTAATTACATGAGATG+TGG | + | chr4.3:9857173-9857192 | MS.gene030769:intron | 30.0% | |
| TGTTAAAATATCTGAACCAC+AGG | + | chr4.3:9859097-9859116 | MS.gene030769:CDS | 30.0% | |
| TTAGTAACAACAATCTGATC+AGG | - | chr4.3:9857258-9857277 | None:intergenic | 30.0% | |
| TTATGCATTGAATTGGCATT+GGG | + | chr4.3:9857477-9857496 | MS.gene030769:intron | 30.0% | |
| TTTATGCATTGAATTGGCAT+TGG | + | chr4.3:9857476-9857495 | MS.gene030769:intron | 30.0% | |
| TTTCTATCATAATGGTATCG+AGG | + | chr4.3:9858561-9858580 | MS.gene030769:intron | 30.0% | |
| ! | AAGCATTTTATTACAGCAGT+CGG | + | chr4.3:9858776-9858795 | MS.gene030769:CDS | 30.0% |
| ! | AATGCATCAAAGATTTTCCT+AGG | - | chr4.3:9857616-9857635 | None:intergenic | 30.0% |
| ! | AATTTTGGACTCAAGAAGTT+TGG | - | chr4.3:9858192-9858211 | None:intergenic | 30.0% |
| ! | ACTTGATTTCTGTTTGAGTT+GGG | + | chr4.3:9858863-9858882 | MS.gene030769:intron | 30.0% |
| ! | ATACTTTCTTTTCTCTTGCA+GGG | + | chr4.3:9859208-9859227 | MS.gene030769:intron | 30.0% |
| ! | ATTGATTTCAGCTCCTATTA+CGG | + | chr4.3:9859247-9859266 | MS.gene030769:CDS | 30.0% |
| ! | ATTTTAAACTGTTTTACCGC+AGG | + | chr4.3:9858709-9858728 | MS.gene030769:intron | 30.0% |
| ! | ATTTTGGACTCAAGAAGTTT+GGG | - | chr4.3:9858191-9858210 | None:intergenic | 30.0% |
| ! | CAAGAAGTTTGGGATTTAAA+AGG | - | chr4.3:9858181-9858200 | None:intergenic | 30.0% |
| ! | GATCAGATTGTTGTTACTAA+TGG | + | chr4.3:9857258-9857277 | MS.gene030769:CDS | 30.0% |
| ! | TAACATTGTGTTTTGTCTAC+AGG | + | chr4.3:9859408-9859427 | MS.gene030769:intron | 30.0% |
| ! | TATACTTTCTTTTCTCTTGC+AGG | + | chr4.3:9859207-9859226 | MS.gene030769:intron | 30.0% |
| ! | TTACTTGTGTATGGTAATGT+AGG | + | chr4.3:9857022-9857041 | MS.gene030769:intron | 30.0% |
| ! | TTCTATCATAATGGTATCGA+GGG | + | chr4.3:9858562-9858581 | MS.gene030769:intron | 30.0% |
| ! | TTTTGACAATGTGTCGTAAT+TGG | + | chr4.3:9857197-9857216 | MS.gene030769:intron | 30.0% |
| !! | AACTGTGAATGGATTTTCTA+AGG | + | chr4.3:9858516-9858535 | MS.gene030769:CDS | 30.0% |
| !! | ATAGCTTTGAAGAAAGAGAA+AGG | - | chr4.3:9858621-9858640 | None:intergenic | 30.0% |
| !! | GTTTCTAGTTTATTCGAACA+TGG | + | chr4.3:9856988-9857007 | MS.gene030769:intron | 30.0% |
| !! | TCTTAATAGTTGTTTTGTGC+AGG | + | chr4.3:9858402-9858421 | MS.gene030769:intron | 30.0% |
| AAAGGAATAGGCAGATAAAC+TGG | - | chr4.3:9859134-9859153 | None:intergenic | 35.0% | |
| AACAGAACTCTAACTGTGAA+TGG | + | chr4.3:9858505-9858524 | MS.gene030769:CDS | 35.0% | |
| ATACCGAATCAACAAATCGT+AGG | - | chr4.3:9857457-9857476 | None:intergenic | 35.0% | |
| ATCATCAGGATAAAATCTGG+AGG | - | chr4.3:9858691-9858710 | None:intergenic | 35.0% | |
| CTATGCTGCATTTCACAATA+TGG | + | chr4.3:9858637-9858656 | MS.gene030769:intron | 35.0% | |
| CTCAAAATCCGATTCTGAAT+TGG | + | chr4.3:9856716-9856735 | MS.gene030769:CDS | 35.0% | |
| CTGCTGTAATAAAATGCTTC+GGG | - | chr4.3:9858775-9858794 | None:intergenic | 35.0% | |
| GACAGAAAAGTGACAAAACA+TGG | - | chr4.3:9859169-9859188 | None:intergenic | 35.0% | |
| GACTTGATTTCTGTTTGAGT+TGG | + | chr4.3:9858862-9858881 | MS.gene030769:intron | 35.0% | |
| GCTAATAGCCTAATCATCTA+TGG | - | chr4.3:9857676-9857695 | None:intergenic | 35.0% | |
| TACCGAATCAACAAATCGTA+GGG | - | chr4.3:9857456-9857475 | None:intergenic | 35.0% | |
| TAGAATAAGGCTGACAAATG+TGG | - | chr4.3:9858831-9858850 | None:intergenic | 35.0% | |
| TAGTCCAAAACCAAACCAAA+TGG | - | chr4.3:9857897-9857916 | None:intergenic | 35.0% | |
| TATAACTTTACCAGAAGCCT+GGG | - | chr4.3:9858320-9858339 | None:intergenic | 35.0% | |
| TATTACGGAAAAGAAGCTGA+GGG | + | chr4.3:9859262-9859281 | MS.gene030769:CDS | 35.0% | |
| TGACCTTCAATATGAAGTGT+TGG | + | chr4.3:9859371-9859390 | MS.gene030769:intron | 35.0% | |
| TGTATCAAAATCAGGTTCAC+CGG | - | chr4.3:9856859-9856878 | None:intergenic | 35.0% | |
| TGTCGATATCTGTTGGATAA+AGG | + | chr4.3:9859316-9859335 | MS.gene030769:CDS | 35.0% | |
| TTCTAATGTTCCAGCATTAG+GGG | - | chr4.3:9857087-9857106 | None:intergenic | 35.0% | |
| TTCTGAATTCTGATGCCATT+TGG | + | chr4.3:9857879-9857898 | MS.gene030769:intron | 35.0% | |
| TTGCATCTTTACCGAAAATG+TGG | + | chr4.3:9858482-9858501 | MS.gene030769:CDS | 35.0% | |
| ! | AATTCTGATGCCATTTGGTT+TGG | + | chr4.3:9857884-9857903 | MS.gene030769:intron | 35.0% |
| ! | AGAGTTCTGTTCCACATTTT+CGG | - | chr4.3:9858496-9858515 | None:intergenic | 35.0% |
| ! | CATTATTCCAGCTCCATTTT+GGG | + | chr4.3:9858082-9858101 | MS.gene030769:CDS | 35.0% |
| ! | TCATTATTCCAGCTCCATTT+TGG | + | chr4.3:9858081-9858100 | MS.gene030769:CDS | 35.0% |
| ! | TTAAACATGTGGTGATGTCA+TGG | - | chr4.3:9857429-9857448 | None:intergenic | 35.0% |
| !! | AACCCTACGATTTGTTGATT+CGG | + | chr4.3:9857451-9857470 | MS.gene030769:intron | 35.0% |
| !! | GTAATTGGTTGATTTTGCAG+AGG | + | chr4.3:9857212-9857231 | MS.gene030769:intron | 35.0% |
| AGTAGTATATCCCAGAAAGC+AGG | + | chr4.3:9858963-9858982 | MS.gene030769:CDS | 40.0% | |
| ATAAAACGCGTCAGCTACTA+AGG | - | chr4.3:9858919-9858938 | None:intergenic | 40.0% | |
| ATAACTACTTAGCGCGTGTT+TGG | + | chr4.3:9857390-9857409 | MS.gene030769:intron | 40.0% | |
| ATAACTTTACCAGAAGCCTG+GGG | - | chr4.3:9858319-9858338 | None:intergenic | 40.0% | |
| ATATCTGTTGGATAAAGGCC+AGG | + | chr4.3:9859321-9859340 | MS.gene030769:CDS | 40.0% | |
| ATCAGAATTCAGAACAGTGC+AGG | - | chr4.3:9857873-9857892 | None:intergenic | 40.0% | |
| ATTCTCTACAGCTGCTTGTA+GGG | - | chr4.3:9859506-9859525 | None:intergenic | 40.0% | |
| ATTGACGTTGGAAGAATCAC+AGG | - | chr4.3:9858146-9858165 | None:intergenic | 40.0% | |
| CAATTCGTGAAGGATACACA+AGG | + | chr4.3:9857057-9857076 | MS.gene030769:CDS | 40.0% | |
| CGAATCAACATACCTGACTT+TGG | - | chr4.3:9858808-9858827 | None:intergenic | 40.0% | |
| CTATTACGGAAAAGAAGCTG+AGG | + | chr4.3:9859261-9859280 | MS.gene030769:CDS | 40.0% | |
| GCACCAACACTTCATATTGA+AGG | - | chr4.3:9859377-9859396 | None:intergenic | 40.0% | |
| GGGATTAATGCAATTCGTGA+AGG | + | chr4.3:9857047-9857066 | MS.gene030769:CDS | 40.0% | |
| GTAATAGCGACAGTTCTTGA+AGG | - | chr4.3:9856783-9856802 | None:intergenic | 40.0% | |
| GTATAACTTTACCAGAAGCC+TGG | - | chr4.3:9858321-9858340 | None:intergenic | 40.0% | |
| GTGATAACTGTTCTATCCTC+TGG | + | chr4.3:9857647-9857666 | MS.gene030769:intron | 40.0% | |
| TAATCATCTATGGCATCCAG+AGG | - | chr4.3:9857666-9857685 | None:intergenic | 40.0% | |
| TAGAGAACGAAGGGATTACT+TGG | + | chr4.3:9859049-9859068 | MS.gene030769:CDS | 40.0% | |
| TATTCTCTACAGCTGCTTGT+AGG | - | chr4.3:9859507-9859526 | None:intergenic | 40.0% | |
| TCTGGATGCCATAGATGATT+AGG | + | chr4.3:9857665-9857684 | MS.gene030769:intron | 40.0% | |
| TTAGGATACACAGATCCTGT+CGG | - | chr4.3:9858257-9858276 | None:intergenic | 40.0% | |
| TTCTCTAAACGCTTTCACCA+TGG | - | chr4.3:9859036-9859055 | None:intergenic | 40.0% | |
| TTGCATCCGTATCTCTTATG+CGG | + | chr4.3:9859468-9859487 | MS.gene030769:CDS | 40.0% | |
| ! | AAGAATCACAGGTGTTGCAT+CGG | - | chr4.3:9858135-9858154 | None:intergenic | 40.0% |
| ! | AGCTAAGCAGAGTATTACTC+AGG | + | chr4.3:9857281-9857300 | MS.gene030769:CDS | 40.0% |
| ! | CTCAGCTTCTTTTCCGTAAT+AGG | - | chr4.3:9859263-9859282 | None:intergenic | 40.0% |
| ! | TGTGTATGGTAATGTAGGCT+GGG | + | chr4.3:9857027-9857046 | MS.gene030769:intron | 40.0% |
| ! | TTGTGTATGGTAATGTAGGC+TGG | + | chr4.3:9857026-9857045 | MS.gene030769:intron | 40.0% |
| !! | GAAAGCGTTTAGAGAACGAA+GGG | + | chr4.3:9859040-9859059 | MS.gene030769:CDS | 40.0% |
| !! | GCTTTCTGGGATATACTACT+AGG | - | chr4.3:9858963-9858982 | None:intergenic | 40.0% |
| !! | GTTGATTTTGCAGAGGAGAA+TGG | + | chr4.3:9857219-9857238 | MS.gene030769:intron | 40.0% |
| !! | TAACATTTTTGGATGGGCGT+TGG | - | chr4.3:9857523-9857542 | None:intergenic | 40.0% |
| !! | TGAAAGCGTTTAGAGAACGA+AGG | + | chr4.3:9859039-9859058 | MS.gene030769:CDS | 40.0% |
| !!! | GATGCCATTTGGTTTGGTTT+TGG | + | chr4.3:9857890-9857909 | MS.gene030769:intron | 40.0% |
| AAAGCAGGAGTTGCTGCATT+AGG | + | chr4.3:9858978-9858997 | MS.gene030769:CDS | 45.0% | |
| AAATACCTCGGCAATAACCG+CGG | - | chr4.3:9856883-9856902 | None:intergenic | 45.0% | |
| ACAAGGTATACCCCTAATGC+TGG | + | chr4.3:9857074-9857093 | MS.gene030769:CDS | 45.0% | |
| ACATTACTCACCTCATCTCC+CGG | - | chr4.3:9857327-9857346 | None:intergenic | 45.0% | |
| ACTGGATGAATTTGCACCTG+TGG | - | chr4.3:9859116-9859135 | None:intergenic | 45.0% | |
| AGTCGGAAAGATCCAAAGTC+AGG | + | chr4.3:9858793-9858812 | MS.gene030769:CDS | 45.0% | |
| CAGATATCGACAGAGAGACT+CGG | - | chr4.3:9859308-9859327 | None:intergenic | 45.0% | |
| CGTAGGGTTGCTTAAACATG+TGG | - | chr4.3:9857440-9857459 | None:intergenic | 45.0% | |
| GGAAAAGAAGCTGAGGGATT+TGG | + | chr4.3:9859268-9859287 | MS.gene030769:CDS | 45.0% | |
| GGTTTGACAGCATTAACACG+TGG | - | chr4.3:9856762-9856781 | None:intergenic | 45.0% | |
| GTCTCTCTGTCGATATCTGT+TGG | + | chr4.3:9859309-9859328 | MS.gene030769:CDS | 45.0% | |
| TAACTGACCCAAAATGGAGC+TGG | - | chr4.3:9858092-9858111 | None:intergenic | 45.0% | |
| TACAGGTAGCACTTGTTCCA+GGG | + | chr4.3:9859425-9859444 | MS.gene030769:intron | 45.0% | |
| TAGGATACACAGATCCTGTC+GGG | - | chr4.3:9858256-9858275 | None:intergenic | 45.0% | |
| TCAGTTACCCAGAAATGGCA+AGG | + | chr4.3:9858105-9858124 | MS.gene030769:CDS | 45.0% | |
| TCTGGGTAACTGACCCAAAA+TGG | - | chr4.3:9858098-9858117 | None:intergenic | 45.0% | |
| TGCAAAGCTTGTATGCGTTG+CGG | - | chr4.3:9858467-9858486 | None:intergenic | 45.0% | |
| TTACCCAGAAATGGCAAGGT+TGG | + | chr4.3:9858109-9858128 | MS.gene030769:CDS | 45.0% | |
| TTGGGTCAGTTACCCAGAAA+TGG | + | chr4.3:9858100-9858119 | MS.gene030769:CDS | 45.0% | |
| ! | AGTGATTGCAGTTTGCTCAC+CGG | + | chr4.3:9857305-9857324 | MS.gene030769:CDS | 45.0% |
| !! | ACCTGATTTTGATACACCCG+CGG | + | chr4.3:9856863-9856882 | MS.gene030769:CDS | 45.0% |
| !! | CTGTTTGAGTTGGGATACTG+TGG | + | chr4.3:9858872-9858891 | MS.gene030769:intron | 45.0% |
| AAAGCTTGTATGCGTTGCGG+GGG | - | chr4.3:9858464-9858483 | None:intergenic | 50.0% | |
| AAGTGCAGCAGAGGTAAGAG+GGG | - | chr4.3:9859545-9859564 | None:intergenic | 50.0% | |
| AATACCTCGGCAATAACCGC+GGG | - | chr4.3:9856882-9856901 | None:intergenic | 50.0% | |
| ACAAGTGCAGCAGAGGTAAG+AGG | - | chr4.3:9859547-9859566 | None:intergenic | 50.0% | |
| ACCGCGGGTGTATCAAAATC+AGG | - | chr4.3:9856867-9856886 | None:intergenic | 50.0% | |
| ATGCAGCAACTCCTGCTTTC+TGG | - | chr4.3:9858977-9858996 | None:intergenic | 50.0% | |
| CAAAGCTTGTATGCGTTGCG+GGG | - | chr4.3:9858465-9858484 | None:intergenic | 50.0% | |
| CAAGTGCAGCAGAGGTAAGA+GGG | - | chr4.3:9859546-9859565 | None:intergenic | 50.0% | |
| CTACAGGTAGCACTTGTTCC+AGG | + | chr4.3:9859424-9859443 | MS.gene030769:intron | 50.0% | |
| GCAAAGCTTGTATGCGTTGC+GGG | - | chr4.3:9858466-9858485 | None:intergenic | 50.0% | |
| GCATTAGGACTAGGCTATGC+CGG | + | chr4.3:9858993-9859012 | MS.gene030769:CDS | 50.0% | |
| GGAGTTGCTGCATTAGGACT+AGG | + | chr4.3:9858984-9859003 | MS.gene030769:CDS | 50.0% | |
| GGGATGCCGCATAAGAGATA+CGG | - | chr4.3:9859477-9859496 | None:intergenic | 50.0% | |
| TCTACAGCTGCTTGTAGGGT+GGG | - | chr4.3:9859502-9859521 | None:intergenic | 50.0% | |
| TGCAGCAACTCCTGCTTTCT+GGG | - | chr4.3:9858976-9858995 | None:intergenic | 50.0% | |
| TGGCGTTCCTGTTATTCGCT+TGG | + | chr4.3:9856830-9856849 | MS.gene030769:CDS | 50.0% | |
| TGTTCACCATCTAACCCGAC+AGG | + | chr4.3:9858239-9858258 | MS.gene030769:CDS | 50.0% | |
| ! | ACAGATCCTGTCGGGTTAGA+TGG | - | chr4.3:9858248-9858267 | None:intergenic | 50.0% |
| ! | AGATTGTAGCAAAGCACCCC+AGG | + | chr4.3:9858300-9858319 | MS.gene030769:CDS | 50.0% |
| ! | CTTGTTCCAGGGAGTGCATT+TGG | + | chr4.3:9859436-9859455 | MS.gene030769:CDS | 50.0% |
| ! | GTGATTGCAGTTTGCTCACC+GGG | + | chr4.3:9857306-9857325 | MS.gene030769:CDS | 50.0% |
| ! | TGGCGGCTTGGATATATTGC+TGG | + | chr4.3:9858749-9858768 | MS.gene030769:CDS | 50.0% |
| ACCGCAGGCCTTTGCAATGA+CGG | + | chr4.3:9858724-9858743 | MS.gene030769:intron | 55.0% | |
| AGCTGCTTGTAGGGTGGGAA+GGG | - | chr4.3:9859497-9859516 | None:intergenic | 55.0% | |
| CCTGTTATTCGCTTGGCTGC+CGG | + | chr4.3:9856837-9856856 | MS.gene030769:CDS | 55.0% | |
| CTCTACAGCTGCTTGTAGGG+TGG | - | chr4.3:9859503-9859522 | None:intergenic | 55.0% | |
| GCCACTGCTCTTGTTCAAGC+TGG | + | chr4.3:9856810-9856829 | MS.gene030769:CDS | 55.0% | |
| GCCAGCTTGAACAAGAGCAG+TGG | - | chr4.3:9856814-9856833 | None:intergenic | 55.0% | |
| TAGGACTAGGCTATGCCGGT+GGG | + | chr4.3:9858997-9859016 | MS.gene030769:CDS | 55.0% | |
| TCGTCACCAAATGCACTCCC+TGG | - | chr4.3:9859445-9859464 | None:intergenic | 55.0% | |
| TCTTCTGTTCTGCTCCACCC+CGG | - | chr4.3:9856679-9856698 | None:intergenic | 55.0% | |
| TTAGGACTAGGCTATGCCGG+TGG | + | chr4.3:9858996-9859015 | MS.gene030769:CDS | 55.0% | |
| ! | AGTTTGCTCACCGGGAGATG+AGG | + | chr4.3:9857314-9857333 | MS.gene030769:CDS | 55.0% |
| ! | CGGCCAACCTTGCCATTTCT+GGG | - | chr4.3:9858115-9858134 | None:intergenic | 55.0% |
| ! | TCGGCCAACCTTGCCATTTC+TGG | - | chr4.3:9858116-9858135 | None:intergenic | 55.0% |
| !! | AGGCCTTTGCAATGACGGGT+TGG | + | chr4.3:9858729-9858748 | MS.gene030769:intron | 55.0% |
| !! | CCTTTGCAATGACGGGTTGG+CGG | + | chr4.3:9858732-9858751 | MS.gene030769:CDS | 55.0% |
| !! | TGGGGAGGCTGTTTCTACCA+TGG | + | chr4.3:9859016-9859035 | MS.gene030769:CDS | 55.0% |
| AGGACTAGGCTATGCCGGTG+GGG | + | chr4.3:9858998-9859017 | MS.gene030769:CDS | 60.0% | |
| CAGCTGCTTGTAGGGTGGGA+AGG | - | chr4.3:9859498-9859517 | None:intergenic | 60.0% | |
| CCCGTCATTGCAAAGGCCTG+CGG | - | chr4.3:9858728-9858747 | None:intergenic | 60.0% | |
| CCGCAGGCCTTTGCAATGAC+GGG | + | chr4.3:9858725-9858744 | MS.gene030769:intron | 60.0% | |
| CCGCCAACCCGTCATTGCAA+AGG | - | chr4.3:9858735-9858754 | None:intergenic | 60.0% | |
| CCGGCAGCCAAGCGAATAAC+AGG | - | chr4.3:9856840-9856859 | None:intergenic | 60.0% | |
| GGTAGAAACAGCCTCCCCAC+CGG | - | chr4.3:9859015-9859034 | None:intergenic | 60.0% | |
| TACACCCGCGGTTATTGCCG+AGG | + | chr4.3:9856875-9856894 | MS.gene030769:CDS | 60.0% | |
| ! | AGCAAAGCACCCCAGGCTTC+TGG | + | chr4.3:9858307-9858326 | MS.gene030769:CDS | 60.0% |
| ACTAGGCTATGCCGGTGGGG+AGG | + | chr4.3:9859001-9859020 | MS.gene030769:CDS | 65.0% | |
| !! | GCAATGACGGGTTGGCGGCT+TGG | + | chr4.3:9858737-9858756 | MS.gene030769:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 9856669 | 9859570 | 9856669 | ID=MS.gene030769 |
| chr4.3 | mRNA | 9856669 | 9859570 | 9856669 | ID=MS.gene030769.t1;Parent=MS.gene030769 |
| chr4.3 | exon | 9856669 | 9856896 | 9856669 | ID=MS.gene030769.t1.exon1;Parent=MS.gene030769.t1 |
| chr4.3 | CDS | 9856669 | 9856896 | 9856669 | ID=cds.MS.gene030769.t1;Parent=MS.gene030769.t1 |
| chr4.3 | exon | 9857044 | 9857137 | 9857044 | ID=MS.gene030769.t1.exon2;Parent=MS.gene030769.t1 |
| chr4.3 | CDS | 9857044 | 9857137 | 9857044 | ID=cds.MS.gene030769.t1;Parent=MS.gene030769.t1 |
| chr4.3 | exon | 9857232 | 9857335 | 9857232 | ID=MS.gene030769.t1.exon3;Parent=MS.gene030769.t1 |
| chr4.3 | CDS | 9857232 | 9857335 | 9857232 | ID=cds.MS.gene030769.t1;Parent=MS.gene030769.t1 |
| chr4.3 | exon | 9858080 | 9858328 | 9858080 | ID=MS.gene030769.t1.exon4;Parent=MS.gene030769.t1 |
| chr4.3 | CDS | 9858080 | 9858328 | 9858080 | ID=cds.MS.gene030769.t1;Parent=MS.gene030769.t1 |
| chr4.3 | exon | 9858424 | 9858537 | 9858424 | ID=MS.gene030769.t1.exon5;Parent=MS.gene030769.t1 |
| chr4.3 | CDS | 9858424 | 9858537 | 9858424 | ID=cds.MS.gene030769.t1;Parent=MS.gene030769.t1 |
| chr4.3 | exon | 9858731 | 9858814 | 9858731 | ID=MS.gene030769.t1.exon6;Parent=MS.gene030769.t1 |
| chr4.3 | CDS | 9858731 | 9858814 | 9858731 | ID=cds.MS.gene030769.t1;Parent=MS.gene030769.t1 |
| chr4.3 | exon | 9858948 | 9859118 | 9858948 | ID=MS.gene030769.t1.exon7;Parent=MS.gene030769.t1 |
| chr4.3 | CDS | 9858948 | 9859118 | 9858948 | ID=cds.MS.gene030769.t1;Parent=MS.gene030769.t1 |
| chr4.3 | exon | 9859229 | 9859342 | 9859229 | ID=MS.gene030769.t1.exon8;Parent=MS.gene030769.t1 |
| chr4.3 | CDS | 9859229 | 9859342 | 9859229 | ID=cds.MS.gene030769.t1;Parent=MS.gene030769.t1 |
| chr4.3 | exon | 9859430 | 9859570 | 9859430 | ID=MS.gene030769.t1.exon9;Parent=MS.gene030769.t1 |
| chr4.3 | CDS | 9859430 | 9859570 | 9859430 | ID=cds.MS.gene030769.t1;Parent=MS.gene030769.t1 |
| Gene Sequence |
| Protein sequence |
