Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031393.t1 | XP_013464736.1 | 98.5 | 399 | 6 | 0 | 1 | 399 | 1 | 399 | 3.20E-219 | 770.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031393.t1 | Q01289 | 92.8 | 400 | 27 | 2 | 1 | 399 | 1 | 399 | 1.8e-207 | 723.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031393.t1 | A0A072VAY8 | 98.5 | 399 | 6 | 0 | 1 | 399 | 1 | 399 | 2.3e-219 | 770.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene069371 | MS.gene031393 | PPI |
MS.gene059858 | MS.gene031393 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031393.t1 | MTR_2g079710 | 98.496 | 399 | 6 | 0 | 1 | 399 | 1 | 399 | 0.0 | 811 |
MS.gene031393.t1 | MTR_1g068970 | 34.286 | 315 | 168 | 13 | 88 | 396 | 36 | 317 | 2.35e-33 | 127 |
MS.gene031393.t1 | MTR_1g100395 | 30.159 | 315 | 181 | 11 | 88 | 396 | 31 | 312 | 5.49e-31 | 120 |
MS.gene031393.t1 | MTR_7g099850 | 32.308 | 325 | 162 | 14 | 88 | 396 | 36 | 318 | 1.10e-30 | 120 |
MS.gene031393.t1 | MTR_6g053550 | 30.769 | 312 | 182 | 10 | 90 | 396 | 41 | 323 | 1.48e-30 | 119 |
MS.gene031393.t1 | MTR_6g053600 | 35.808 | 229 | 117 | 6 | 88 | 310 | 25 | 229 | 5.45e-29 | 114 |
MS.gene031393.t1 | MTR_8g098415 | 32.515 | 326 | 163 | 13 | 88 | 398 | 31 | 314 | 1.40e-28 | 114 |
MS.gene031393.t1 | MTR_8g098415 | 32.817 | 323 | 160 | 13 | 88 | 395 | 31 | 311 | 1.47e-28 | 114 |
MS.gene031393.t1 | MTR_1g100335 | 30.794 | 315 | 179 | 13 | 88 | 396 | 31 | 312 | 2.16e-28 | 113 |
MS.gene031393.t1 | MTR_3g077410 | 27.302 | 315 | 191 | 11 | 88 | 396 | 39 | 321 | 9.04e-28 | 112 |
MS.gene031393.t1 | MTR_4g105310 | 31.624 | 234 | 133 | 8 | 88 | 317 | 50 | 260 | 5.64e-27 | 108 |
MS.gene031393.t1 | MTR_1g100315 | 29.712 | 313 | 185 | 10 | 88 | 396 | 31 | 312 | 5.90e-27 | 109 |
MS.gene031393.t1 | MTR_4g105310 | 28.797 | 316 | 185 | 12 | 88 | 396 | 50 | 332 | 6.93e-27 | 110 |
MS.gene031393.t1 | MTR_1g100335 | 32.941 | 255 | 141 | 9 | 88 | 337 | 31 | 260 | 1.55e-26 | 107 |
MS.gene031393.t1 | MTR_1g100335 | 34.934 | 229 | 121 | 8 | 88 | 311 | 31 | 236 | 2.83e-26 | 106 |
MS.gene031393.t1 | MTR_1g100305 | 29.936 | 314 | 183 | 11 | 88 | 396 | 31 | 312 | 1.35e-25 | 105 |
MS.gene031393.t1 | MTR_1g068970 | 33.462 | 260 | 141 | 9 | 140 | 397 | 22 | 251 | 6.34e-25 | 102 |
MS.gene031393.t1 | MTR_8g099995 | 27.439 | 328 | 202 | 11 | 73 | 396 | 26 | 321 | 3.96e-24 | 102 |
MS.gene031393.t1 | MTR_8g098415 | 33.953 | 215 | 109 | 7 | 88 | 295 | 31 | 219 | 1.90e-22 | 95.1 |
MS.gene031393.t1 | MTR_8g098415 | 32.061 | 262 | 138 | 12 | 140 | 395 | 27 | 254 | 9.19e-21 | 91.3 |
MS.gene031393.t1 | MTR_3g091070 | 27.410 | 332 | 190 | 12 | 75 | 398 | 31 | 319 | 2.83e-16 | 79.7 |
MS.gene031393.t1 | MTR_3g009190 | 27.439 | 328 | 193 | 12 | 86 | 398 | 62 | 359 | 2.98e-14 | 73.9 |
MS.gene031393.t1 | MTR_3g009190 | 27.439 | 328 | 193 | 12 | 86 | 398 | 80 | 377 | 3.39e-14 | 73.9 |
MS.gene031393.t1 | MTR_6g453040 | 27.358 | 318 | 198 | 10 | 90 | 398 | 44 | 337 | 2.67e-13 | 70.9 |
MS.gene031393.t1 | MTR_6g081020 | 35.833 | 120 | 63 | 5 | 88 | 197 | 63 | 178 | 7.37e-13 | 69.7 |
MS.gene031393.t1 | MTR_6g453040 | 29.108 | 213 | 125 | 6 | 86 | 291 | 62 | 255 | 2.18e-12 | 67.8 |
MS.gene031393.t1 | MTR_3g009190 | 26.154 | 325 | 195 | 12 | 89 | 398 | 64 | 358 | 9.84e-12 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene031393.t1 | AT5G54190 | 82.716 | 405 | 64 | 2 | 1 | 399 | 1 | 405 | 0.0 | 688 |
MS.gene031393.t1 | AT4G27440 | 80.846 | 402 | 73 | 2 | 1 | 399 | 1 | 401 | 0.0 | 652 |
MS.gene031393.t1 | AT4G27440 | 80.846 | 402 | 73 | 2 | 1 | 399 | 1 | 401 | 0.0 | 652 |
MS.gene031393.t1 | AT1G03630 | 78.412 | 403 | 81 | 4 | 1 | 399 | 1 | 401 | 0.0 | 626 |
MS.gene031393.t1 | AT1G03630 | 78.304 | 401 | 83 | 4 | 1 | 399 | 1 | 399 | 0.0 | 623 |
MS.gene031393.t1 | AT5G54190 | 90.493 | 284 | 27 | 0 | 116 | 399 | 1 | 284 | 0.0 | 546 |
MS.gene031393.t1 | AT4G23430 | 29.814 | 322 | 172 | 10 | 88 | 395 | 31 | 312 | 1.50e-30 | 119 |
MS.gene031393.t1 | AT4G23430 | 30.435 | 322 | 168 | 11 | 88 | 395 | 31 | 310 | 1.10e-29 | 117 |
MS.gene031393.t1 | AT4G23420 | 31.013 | 316 | 176 | 13 | 88 | 395 | 48 | 329 | 2.66e-29 | 116 |
MS.gene031393.t1 | AT4G23420 | 31.013 | 316 | 176 | 13 | 88 | 395 | 31 | 312 | 3.13e-29 | 116 |
MS.gene031393.t1 | AT4G23420 | 31.013 | 316 | 176 | 13 | 88 | 395 | 31 | 312 | 3.13e-29 | 116 |
MS.gene031393.t1 | AT4G23420 | 33.613 | 238 | 128 | 9 | 88 | 318 | 31 | 245 | 1.72e-27 | 110 |
MS.gene031393.t1 | AT4G23420 | 33.613 | 238 | 128 | 9 | 88 | 318 | 31 | 245 | 2.27e-27 | 109 |
MS.gene031393.t1 | AT2G37540 | 35.021 | 237 | 117 | 11 | 88 | 315 | 35 | 243 | 9.11e-27 | 108 |
MS.gene031393.t1 | AT4G11410 | 30.476 | 315 | 182 | 10 | 88 | 397 | 31 | 313 | 9.76e-27 | 109 |
MS.gene031393.t1 | AT2G37540 | 33.846 | 260 | 132 | 12 | 88 | 335 | 35 | 266 | 1.01e-26 | 109 |
MS.gene031393.t1 | AT4G24050 | 30.581 | 327 | 175 | 13 | 84 | 396 | 32 | 320 | 6.52e-26 | 107 |
MS.gene031393.t1 | AT4G11410 | 33.898 | 236 | 125 | 7 | 88 | 317 | 31 | 241 | 4.83e-25 | 103 |
MS.gene031393.t1 | AT5G50130 | 30.126 | 239 | 138 | 8 | 88 | 321 | 38 | 252 | 8.21e-25 | 102 |
MS.gene031393.t1 | AT5G50130 | 30.962 | 239 | 137 | 9 | 88 | 321 | 38 | 253 | 1.44e-24 | 102 |
MS.gene031393.t1 | AT5G02540 | 29.605 | 304 | 173 | 14 | 100 | 396 | 47 | 316 | 2.79e-24 | 102 |
MS.gene031393.t1 | AT4G24050 | 32.218 | 239 | 122 | 8 | 84 | 310 | 32 | 242 | 5.09e-24 | 100 |
MS.gene031393.t1 | AT5G50130 | 30.962 | 239 | 137 | 9 | 88 | 321 | 38 | 253 | 8.74e-24 | 101 |
MS.gene031393.t1 | AT5G50130 | 30.126 | 239 | 138 | 8 | 88 | 321 | 38 | 252 | 1.03e-23 | 100 |
MS.gene031393.t1 | AT5G50130 | 30.962 | 239 | 137 | 9 | 88 | 321 | 38 | 253 | 1.58e-23 | 100 |
MS.gene031393.t1 | AT5G50130 | 30.085 | 236 | 136 | 8 | 91 | 321 | 8 | 219 | 3.02e-23 | 99.4 |
MS.gene031393.t1 | AT5G50130 | 30.932 | 236 | 135 | 9 | 91 | 321 | 8 | 220 | 5.07e-23 | 98.6 |
MS.gene031393.t1 | AT5G50130 | 30.085 | 236 | 136 | 8 | 91 | 321 | 8 | 219 | 5.98e-23 | 98.2 |
MS.gene031393.t1 | AT5G50130 | 30.932 | 236 | 135 | 9 | 91 | 321 | 8 | 220 | 9.87e-23 | 97.4 |
MS.gene031393.t1 | AT1G64590 | 29.412 | 323 | 184 | 14 | 84 | 396 | 32 | 320 | 1.29e-22 | 98.2 |
MS.gene031393.t1 | AT4G23430 | 27.329 | 322 | 170 | 11 | 88 | 395 | 31 | 302 | 2.89e-21 | 94.0 |
MS.gene031393.t1 | AT4G23430 | 27.950 | 322 | 166 | 12 | 88 | 395 | 31 | 300 | 1.98e-20 | 91.3 |
MS.gene031393.t1 | AT4G09750 | 28.926 | 242 | 136 | 8 | 88 | 325 | 45 | 254 | 6.97e-19 | 87.0 |
MS.gene031393.t1 | AT4G27760 | 29.878 | 328 | 180 | 15 | 88 | 398 | 59 | 353 | 1.76e-16 | 80.9 |
MS.gene031393.t1 | AT5G53100 | 29.518 | 332 | 187 | 12 | 84 | 398 | 42 | 343 | 1.80e-15 | 77.8 |
MS.gene031393.t1 | AT5G53090 | 28.955 | 335 | 184 | 14 | 83 | 398 | 53 | 352 | 1.32e-14 | 75.1 |
Find 108 sgRNAs with CRISPR-Local
Find 182 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GAACAAGAACAAACCTCTTT+TGG | 0.237389 | 2.1:-20282548 | None:intergenic |
TTGCCACAACAGGCTTGTTT+AGG | 0.258724 | 2.1:+20284324 | MS.gene031393:CDS |
TAACAAAATCTGGTGTTTAC+TGG | 0.260185 | 2.1:+20284792 | MS.gene031393:CDS |
GGACTTGCCGGTGGCTTGAA+TGG | 0.269291 | 2.1:+20284146 | MS.gene031393:CDS |
AGGAAAATGGCATGTAATTA+TGG | 0.286577 | 2.1:+20283529 | MS.gene031393:CDS |
TTTCCTCATGGTATCGTCTA+TGG | 0.300626 | 2.1:-20284265 | None:intergenic |
CTCTACATCACTTGCCTCTT+GGG | 0.301301 | 2.1:-20284855 | None:intergenic |
AGCCTTTGGTGATGTACTTC+TGG | 0.301562 | 2.1:-20284385 | None:intergenic |
CTTGCCATCAGGTGAGGATT+TGG | 0.306599 | 2.1:-20283423 | None:intergenic |
GGTGACTTGAGGGGACTTGC+CGG | 0.313480 | 2.1:+20284134 | MS.gene031393:CDS |
GTGATCACTGGTGCTTCATC+TGG | 0.327170 | 2.1:+20283470 | MS.gene031393:CDS |
CACTTGCCTCTTGGGATAGC+TGG | 0.328716 | 2.1:-20284847 | None:intergenic |
TCTCTACATCACTTGCCTCT+TGG | 0.331750 | 2.1:-20284856 | None:intergenic |
TGCCACAACAGGCTTGTTTA+GGG | 0.348200 | 2.1:+20284325 | MS.gene031393:CDS |
GGCATGTAATTATGGCTTGC+AGG | 0.351136 | 2.1:+20283537 | MS.gene031393:CDS |
AGTCACCAAGGTTAGCCTTT+GGG | 0.353144 | 2.1:-20284118 | None:intergenic |
GATCCAAGCTTAACAAAATC+TGG | 0.356495 | 2.1:+20284782 | MS.gene031393:CDS |
AGACGATACCATGAGGAAAC+TGG | 0.360530 | 2.1:+20284269 | MS.gene031393:CDS |
TTGCAGCTCTTGCAGCTTTG+AGG | 0.361561 | 2.1:-20283565 | None:intergenic |
GACTTGCCGGTGGCTTGAAT+GGG | 0.370611 | 2.1:+20284147 | MS.gene031393:CDS |
CTTTGGCCGAGACAGGAAAA+TGG | 0.386297 | 2.1:+20283516 | MS.gene031393:CDS |
TTGGTGATGTACTTCTGGAA+TGG | 0.387469 | 2.1:-20284380 | None:intergenic |
ATCTTCTGAGACGTAGCCTT+TGG | 0.388065 | 2.1:-20284399 | None:intergenic |
GCCAATTCGTTGATAACTTC+AGG | 0.388170 | 2.1:+20283657 | MS.gene031393:CDS |
TGGTGATGTACTTCTGGAAT+GGG | 0.389553 | 2.1:-20284379 | None:intergenic |
TTCTTTCTCCATTCCAAAAG+AGG | 0.396884 | 2.1:+20282535 | MS.gene031393:CDS |
TAGTGAGAAGCTTGTTGGTT+TGG | 0.402864 | 2.1:+20284901 | MS.gene031393:CDS |
CCTGGTTGCATTGCCACAAC+AGG | 0.418620 | 2.1:+20284314 | MS.gene031393:CDS |
TCAAAGCGCTTGATCATTGT+CGG | 0.433806 | 2.1:+20283854 | MS.gene031393:CDS |
GCCTGAAGTTATCAACGAAT+TGG | 0.436099 | 2.1:-20283658 | None:intergenic |
CCTAGCCACTGCTAAGGCTT+TGG | 0.440014 | 2.1:+20283499 | MS.gene031393:CDS |
GCTAAGGCTTTGGCCGAGAC+AGG | 0.447175 | 2.1:+20283509 | MS.gene031393:CDS |
AATCCTTCAGCAGTGAATCT+AGG | 0.447263 | 2.1:-20283746 | None:intergenic |
AAGTCACCAAGGTTAGCCTT+TGG | 0.450795 | 2.1:-20284119 | None:intergenic |
GCAAGAGCTGCAAAATCTGC+TGG | 0.454061 | 2.1:+20283575 | MS.gene031393:CDS |
AACAGTTCCTCCATGATAGA+TGG | 0.454171 | 2.1:+20284173 | MS.gene031393:CDS |
AGTGTTGGGACAAACCATCT+TGG | 0.454856 | 2.1:+20283776 | MS.gene031393:CDS |
GAAGTTAGTGAGAAGCTTGT+TGG | 0.456735 | 2.1:+20284896 | MS.gene031393:CDS |
AATCTGGTGTTTACTGGAGC+TGG | 0.460304 | 2.1:+20284798 | MS.gene031393:CDS |
TTTGCTGTCCTTGTATGCCT+TGG | 0.462610 | 2.1:-20284213 | None:intergenic |
GGCTAACCTTGGTGACTTGA+GGG | 0.462961 | 2.1:+20284124 | MS.gene031393:CDS |
ACAATGATCAAGCGCTTTGA+AGG | 0.464579 | 2.1:-20283851 | None:intergenic |
GGCAATGCAACCAGGGTAAA+GGG | 0.470475 | 2.1:-20284306 | None:intergenic |
TGGCAATGCAACCAGGGTAA+AGG | 0.479689 | 2.1:-20284307 | None:intergenic |
GTCACCAAGGTTAGCCTTTG+GGG | 0.480313 | 2.1:-20284117 | None:intergenic |
GGTGAGGATTTGGTAACTGC+TGG | 0.480958 | 2.1:-20283413 | None:intergenic |
TGATGGTGCCAAGGCATACA+AGG | 0.481815 | 2.1:+20284205 | MS.gene031393:CDS |
ACTGGTGCTTCATCTGGATT+AGG | 0.482488 | 2.1:+20283476 | MS.gene031393:CDS |
AAAATCTCCACCATCTATCA+TGG | 0.483177 | 2.1:-20284183 | None:intergenic |
GGTAACACAAACACCTTGGC+TGG | 0.486335 | 2.1:+20284086 | MS.gene031393:intron |
GTGTTGGGACAAACCATCTT+GGG | 0.488124 | 2.1:+20283777 | MS.gene031393:CDS |
ATCATTGTCGGCTCAATCAC+AGG | 0.490533 | 2.1:+20283866 | MS.gene031393:CDS |
AAGGATTTGAGCTTAGTGTT+GGG | 0.500150 | 2.1:+20283762 | MS.gene031393:CDS |
TTTGGAATGGAGAAAGAAGC+AGG | 0.504002 | 2.1:-20282530 | None:intergenic |
TGCCCAGGTCCTCAAGCAAA+AGG | 0.504429 | 2.1:-20283817 | None:intergenic |
GGTGATGTACTTCTGGAATG+GGG | 0.505411 | 2.1:-20284378 | None:intergenic |
CCTGTTGTGGCAATGCAACC+AGG | 0.511779 | 2.1:-20284314 | None:intergenic |
TCATTGTCTGATTCTTTGAA+AGG | 0.513909 | 2.1:+20282696 | MS.gene031393:CDS |
CCAAAGCCTTAGCAGTGGCT+AGG | 0.521349 | 2.1:-20283499 | None:intergenic |
AGCTGCAAAATCTGCTGGCA+TGG | 0.524763 | 2.1:+20283580 | MS.gene031393:CDS |
TGTTTACTTGCCAACTGCTA+AGG | 0.526344 | 2.1:+20283721 | MS.gene031393:CDS |
GAAGGATTTGAGCTTAGTGT+TGG | 0.530033 | 2.1:+20283761 | MS.gene031393:CDS |
AATCTAGGTTCCTTAGCAGT+TGG | 0.534992 | 2.1:-20283731 | None:intergenic |
AGAGGCAAGTGATGTAGAGA+AGG | 0.540407 | 2.1:+20284859 | MS.gene031393:CDS |
AGGCTAACCTTGGTGACTTG+AGG | 0.541106 | 2.1:+20284123 | MS.gene031393:CDS |
AAAATCTGCTGGCATGGCTA+AGG | 0.541326 | 2.1:+20283586 | MS.gene031393:CDS |
GCATGTAATTATGGCTTGCA+GGG | 0.542565 | 2.1:+20283538 | MS.gene031393:CDS |
GAACCTAGATTCACTGCTGA+AGG | 0.543294 | 2.1:+20283743 | MS.gene031393:CDS |
AGCTGGAAAGAGACTTGCTC+AGG | 0.548244 | 2.1:+20284424 | MS.gene031393:CDS |
AAGGGTAGTCAGATTTGCCC+AGG | 0.549484 | 2.1:-20283832 | None:intergenic |
ACATTTGCTTCCCTTTACCC+TGG | 0.554504 | 2.1:+20284296 | MS.gene031393:CDS |
TAGAGAAGGCTCGCAAGGTG+TGG | 0.562086 | 2.1:+20284873 | MS.gene031393:CDS |
AAAGGAAGTGTTGTGATCAC+TGG | 0.566260 | 2.1:+20283458 | MS.gene031393:CDS |
TGCTGTGAGGGCAGAGACAG+CGG | 0.567342 | 2.1:+20283379 | MS.gene031393:CDS |
GTGATGTACTTCTGGAATGG+GGG | 0.570625 | 2.1:-20284377 | None:intergenic |
GACTTGAGGGGACTTGCCGG+TGG | 0.570686 | 2.1:+20284137 | MS.gene031393:CDS |
AAAGATTGGTGCATCTCTCA+AGG | 0.570795 | 2.1:+20282653 | MS.gene031393:CDS |
CTCTTCTGCATTGAGGTGCA+AGG | 0.571860 | 2.1:+20282728 | MS.gene031393:CDS |
ATGTGATTCCAGTTTCCTCA+TGG | 0.579597 | 2.1:-20284277 | None:intergenic |
TGATGTAGAGAAGGCTCGCA+AGG | 0.581297 | 2.1:+20284868 | MS.gene031393:CDS |
CTCCCTAAACAAGCCTGTTG+TGG | 0.583907 | 2.1:-20284327 | None:intergenic |
GGCAAGAAAACATTGAGGAA+AGG | 0.585122 | 2.1:+20283440 | MS.gene031393:CDS |
CAGGCGATCTGAAATGCCGT+TGG | 0.585323 | 2.1:+20283676 | MS.gene031393:CDS |
AGAGAAGGCTCGCAAGGTGT+GGG | 0.587119 | 2.1:+20284874 | MS.gene031393:CDS |
AAAGAAGAAAATGCCCAAGA+TGG | 0.589050 | 2.1:-20283790 | None:intergenic |
TACGTCTCAGAAGATGAAGC+TGG | 0.589575 | 2.1:+20284407 | MS.gene031393:CDS |
TTGGCGAACGCTGTCGAGAG+AGG | 0.596671 | 2.1:-20283639 | None:intergenic |
AACAGGTAACACAAACACCT+TGG | 0.602976 | 2.1:+20284082 | MS.gene031393:intron |
GTTGAGCCCATTCAAGCCAC+CGG | 0.607982 | 2.1:-20284153 | None:intergenic |
GGATTTGGTAACTGCTGGAG+TGG | 0.616729 | 2.1:-20283408 | None:intergenic |
CAATGATCAAGCGCTTTGAA+GGG | 0.619633 | 2.1:-20283850 | None:intergenic |
GAACGCTGTCGAGAGAGGAA+AGG | 0.620107 | 2.1:-20283634 | None:intergenic |
GTTACCAAATCCTCACCTGA+TGG | 0.621840 | 2.1:+20283419 | MS.gene031393:CDS |
ATTAGGCCTAGCCACTGCTA+AGG | 0.622076 | 2.1:+20283493 | MS.gene031393:CDS |
TTCCAGAAGTACATCACCAA+AGG | 0.629677 | 2.1:+20284383 | MS.gene031393:CDS |
AGTTCCTCCATGATAGATGG+TGG | 0.637689 | 2.1:+20284176 | MS.gene031393:CDS |
CTGTTGTGGCAATGCAACCA+GGG | 0.640819 | 2.1:-20284313 | None:intergenic |
GCTAACCTTGGTGACTTGAG+GGG | 0.650668 | 2.1:+20284125 | MS.gene031393:CDS |
TGAAAACCAGCTATCCCAAG+AGG | 0.654717 | 2.1:+20284841 | MS.gene031393:CDS |
CTCGGCCAAAGCCTTAGCAG+TGG | 0.657245 | 2.1:-20283504 | None:intergenic |
TTGTTAACAAGCACATCCAA+CGG | 0.658058 | 2.1:-20283692 | None:intergenic |
GAATGGAGAAAGAAGCAGGA+AGG | 0.672736 | 2.1:-20282526 | None:intergenic |
TCACCAAGGTTAGCCTTTGG+GGG | 0.673643 | 2.1:-20284116 | None:intergenic |
TGATGTACTTCTGGAATGGG+GGG | 0.674664 | 2.1:-20284376 | None:intergenic |
ATCTCCACCATCTATCATGG+AGG | 0.689487 | 2.1:-20284180 | None:intergenic |
CTGATGGCAAGAAAACATTG+AGG | 0.691289 | 2.1:+20283435 | MS.gene031393:CDS |
CAAGTCCCCTCAAGTCACCA+AGG | 0.698872 | 2.1:-20284130 | None:intergenic |
GTTCCATAGACGATACCATG+AGG | 0.740781 | 2.1:+20284262 | MS.gene031393:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | ATTATTTTTATAAGATATCA+AGG | + | chr2.1:20284564-20284583 | MS.gene031393:intron | 10.0% |
!! | AATTAAAAACACTCATAATT+TGG | - | chr2.1:20283028-20283047 | None:intergenic | 15.0% |
!! | ATTAAAAACACTCATAATTT+GGG | - | chr2.1:20283027-20283046 | None:intergenic | 15.0% |
!! | CTAAAAAAAAACTTGAAATT+AGG | - | chr2.1:20282779-20282798 | None:intergenic | 15.0% |
!! | AATAATCTGAAAGAAACTTA+TGG | - | chr2.1:20284550-20284569 | None:intergenic | 20.0% |
!! | TGTATAAATGTAAAGAATTC+AGG | + | chr2.1:20282898-20282917 | MS.gene031393:intron | 20.0% |
!!! | AATTTGGAAAATGTTTTTGT+AGG | + | chr2.1:20282629-20282648 | MS.gene031393:intron | 20.0% |
!!! | ATTTGGAAAATGTTTTTGTA+GGG | + | chr2.1:20282630-20282649 | MS.gene031393:intron | 20.0% |
! | GTATCTTCATTTCTCATAAA+TGG | + | chr2.1:20284731-20284750 | MS.gene031393:intron | 25.0% |
! | TCCTCAAAATATTAGTACAT+GGG | + | chr2.1:20283110-20283129 | MS.gene031393:intron | 25.0% |
! | TGATAATTGAGCTGAAAATT+TGG | + | chr2.1:20282613-20282632 | MS.gene031393:intron | 25.0% |
! | TGATTGTGTATGAATTAAAC+AGG | + | chr2.1:20284065-20284084 | MS.gene031393:intron | 25.0% |
! | TTATTCAAAAGAATTGAGGA+AGG | + | chr2.1:20282988-20283007 | MS.gene031393:intron | 25.0% |
! | TTCCTCAAAATATTAGTACA+TGG | + | chr2.1:20283109-20283128 | MS.gene031393:intron | 25.0% |
!! | TGTGTTATTCAAAAGAATTG+AGG | + | chr2.1:20282984-20283003 | MS.gene031393:intron | 25.0% |
!!! | GTACTAATATTTTGAGGAAT+TGG | - | chr2.1:20283108-20283127 | None:intergenic | 25.0% |
ACAATGTCCACGAAAAATAA+AGG | - | chr2.1:20283307-20283326 | None:intergenic | 30.0% | |
ACAGGTATAGTTCATTAGTA+TGG | + | chr2.1:20283884-20283903 | MS.gene031393:intron | 30.0% | |
AGGAAAATGGCATGTAATTA+TGG | + | chr2.1:20283529-20283548 | MS.gene031393:CDS | 30.0% | |
ATAAGTTGCTTATCTAGACA+GGG | + | chr2.1:20284651-20284670 | MS.gene031393:intron | 30.0% | |
CAATGTCCACGAAAAATAAA+GGG | - | chr2.1:20283306-20283325 | None:intergenic | 30.0% | |
TAACAAAATCTGGTGTTTAC+TGG | + | chr2.1:20284792-20284811 | MS.gene031393:CDS | 30.0% | |
TCATTGTCTGATTCTTTGAA+AGG | + | chr2.1:20282696-20282715 | MS.gene031393:CDS | 30.0% | |
! | ACCCATGTACTAATATTTTG+AGG | - | chr2.1:20283114-20283133 | None:intergenic | 30.0% |
!! | ATGTTTTTGTAGGGAAAGAT+TGG | + | chr2.1:20282639-20282658 | MS.gene031393:intron | 30.0% |
!! | TTTTGTTTATCTCTACCAGA+GGG | + | chr2.1:20283337-20283356 | MS.gene031393:intron | 30.0% |
!!! | AATGGTTTTTTACTGCTATC+AGG | + | chr2.1:20283927-20283946 | MS.gene031393:intron | 30.0% |
!!! | CTCAAGGATTCAACATTTTT+TGG | + | chr2.1:20282669-20282688 | MS.gene031393:CDS | 30.0% |
!!! | GGGAATAGAGTTTTAAACAA+GGG | - | chr2.1:20284359-20284378 | None:intergenic | 30.0% |
!!! | GTTATACCCTTTATTTTTCG+TGG | + | chr2.1:20283297-20283316 | MS.gene031393:intron | 30.0% |
AAAATCTCCACCATCTATCA+TGG | - | chr2.1:20284186-20284205 | None:intergenic | 35.0% | |
AAAGAAGAAAATGCCCAAGA+TGG | - | chr2.1:20283793-20283812 | None:intergenic | 35.0% | |
AAATTCACCGTCATTCCAAA+GGG | + | chr2.1:20282959-20282978 | MS.gene031393:intron | 35.0% | |
AAGGATTTGAGCTTAGTGTT+GGG | + | chr2.1:20283762-20283781 | MS.gene031393:CDS | 35.0% | |
AATATACATATGCATGCGCA+CGG | - | chr2.1:20283266-20283285 | None:intergenic | 35.0% | |
AGATGTGAGTGTTATGTTTG+TGG | + | chr2.1:20283060-20283079 | MS.gene031393:intron | 35.0% | |
ATCAGTACAAAATGCAGCTA+AGG | - | chr2.1:20284049-20284068 | None:intergenic | 35.0% | |
CGGTGAATTTGACAAAATCA+AGG | - | chr2.1:20282949-20282968 | None:intergenic | 35.0% | |
GATAAGTTGCTTATCTAGAC+AGG | + | chr2.1:20284650-20284669 | MS.gene031393:intron | 35.0% | |
GATCCAAGCTTAACAAAATC+TGG | + | chr2.1:20284782-20284801 | MS.gene031393:CDS | 35.0% | |
GCAAATAGCAATAACACTCA+TGG | + | chr2.1:20284674-20284693 | MS.gene031393:intron | 35.0% | |
GGTAACTGAAAACAAAAGCT+TGG | + | chr2.1:20282749-20282768 | MS.gene031393:intron | 35.0% | |
GTCTGTCAGTGGTTAAAAAA+TGG | + | chr2.1:20283909-20283928 | MS.gene031393:intron | 35.0% | |
TAAGTTGCTTATCTAGACAG+GGG | + | chr2.1:20284652-20284671 | MS.gene031393:intron | 35.0% | |
TTCAAAAGAATTGAGGAAGG+AGG | + | chr2.1:20282991-20283010 | MS.gene031393:intron | 35.0% | |
TTCTTTCTCCATTCCAAAAG+AGG | + | chr2.1:20282535-20282554 | MS.gene031393:CDS | 35.0% | |
TTGTTAACAAGCACATCCAA+CGG | - | chr2.1:20283695-20283714 | None:intergenic | 35.0% | |
TTTGAATAACACACACCCTT+TGG | - | chr2.1:20282977-20282996 | None:intergenic | 35.0% | |
! | ACACCAGATTTTGTTAAGCT+TGG | - | chr2.1:20284788-20284807 | None:intergenic | 35.0% |
! | CTGAAAAGTGCATGAATCAT+TGG | + | chr2.1:20284706-20284725 | MS.gene031393:intron | 35.0% |
! | GAACAAGAACAAACCTCTTT+TGG | - | chr2.1:20282551-20282570 | None:intergenic | 35.0% |
!! | AGAACAAACCTCTTTTGGAA+TGG | - | chr2.1:20282546-20282565 | None:intergenic | 35.0% |
!! | TGGTCGTTTGTTTTCAATGT+AGG | + | chr2.1:20284751-20284770 | MS.gene031393:intron | 35.0% |
!!! | ATAGATGGTGGAGATTTTGA+TGG | + | chr2.1:20284188-20284207 | MS.gene031393:CDS | 35.0% |
!!! | ATTTTAGCTCTTCTGCATTG+AGG | + | chr2.1:20282721-20282740 | MS.gene031393:CDS | 35.0% |
!!! | GGGGAATAGAGTTTTAAACA+AGG | - | chr2.1:20284360-20284379 | None:intergenic | 35.0% |
!!! | GTTTTGTTTATCTCTACCAG+AGG | + | chr2.1:20283336-20283355 | MS.gene031393:intron | 35.0% |
AAAGATTGGTGCATCTCTCA+AGG | + | chr2.1:20282653-20282672 | MS.gene031393:CDS | 40.0% | |
AACAGGTAACACAAACACCT+TGG | + | chr2.1:20284082-20284101 | MS.gene031393:intron | 40.0% | |
AACAGTTCCTCCATGATAGA+TGG | + | chr2.1:20284173-20284192 | MS.gene031393:CDS | 40.0% | |
AATCCTTCAGCAGTGAATCT+AGG | - | chr2.1:20283749-20283768 | None:intergenic | 40.0% | |
AATCTAGGTTCCTTAGCAGT+TGG | - | chr2.1:20283734-20283753 | None:intergenic | 40.0% | |
ACAATGATCAAGCGCTTTGA+AGG | - | chr2.1:20283854-20283873 | None:intergenic | 40.0% | |
AGAATTCAGGTGAGTTTGTC+AGG | + | chr2.1:20282911-20282930 | MS.gene031393:intron | 40.0% | |
AGGGAATTGCGACAAAAAGT+CGG | + | chr2.1:20283356-20283375 | MS.gene031393:CDS | 40.0% | |
ATATACATATGCATGCGCAC+GGG | - | chr2.1:20283265-20283284 | None:intergenic | 40.0% | |
ATGCACTTGTAAGACTGTTC+TGG | + | chr2.1:20284495-20284514 | MS.gene031393:intron | 40.0% | |
ATGTGATTCCAGTTTCCTCA+TGG | - | chr2.1:20284280-20284299 | None:intergenic | 40.0% | |
CAAATTCACCGTCATTCCAA+AGG | + | chr2.1:20282958-20282977 | MS.gene031393:intron | 40.0% | |
CTGATGGCAAGAAAACATTG+AGG | + | chr2.1:20283435-20283454 | MS.gene031393:CDS | 40.0% | |
CTTGATATTGCAGAGAAACG+CGG | - | chr2.1:20284018-20284037 | None:intergenic | 40.0% | |
GAAGGATTTGAGCTTAGTGT+TGG | + | chr2.1:20283761-20283780 | MS.gene031393:CDS | 40.0% | |
GAAGTTAGTGAGAAGCTTGT+TGG | + | chr2.1:20284896-20284915 | MS.gene031393:CDS | 40.0% | |
GCCTGAAGTTATCAACGAAT+TGG | - | chr2.1:20283661-20283680 | None:intergenic | 40.0% | |
GGCAAGAAAACATTGAGGAA+AGG | + | chr2.1:20283440-20283459 | MS.gene031393:CDS | 40.0% | |
TGTTTACTTGCCAACTGCTA+AGG | + | chr2.1:20283721-20283740 | MS.gene031393:CDS | 40.0% | |
TTTCCTCATGGTATCGTCTA+TGG | - | chr2.1:20284268-20284287 | None:intergenic | 40.0% | |
! | CAATGATCAAGCGCTTTGAA+GGG | - | chr2.1:20283853-20283872 | None:intergenic | 40.0% |
! | CATCAATCGCAGTCACATTT+TGG | - | chr2.1:20283985-20284004 | None:intergenic | 40.0% |
! | CTCAATGTTTTCTTGCCATC+AGG | - | chr2.1:20283437-20283456 | None:intergenic | 40.0% |
! | GCATGTAATTATGGCTTGCA+GGG | + | chr2.1:20283538-20283557 | MS.gene031393:CDS | 40.0% |
! | TCAAAGCGCTTGATCATTGT+CGG | + | chr2.1:20283854-20283873 | MS.gene031393:CDS | 40.0% |
! | TGGAAGCATAGCTCAGAAAA+TGG | + | chr2.1:20283080-20283099 | MS.gene031393:intron | 40.0% |
! | TTCCAGAAGTACATCACCAA+AGG | + | chr2.1:20284383-20284402 | MS.gene031393:CDS | 40.0% |
! | TTTGGAATGGAGAAAGAAGC+AGG | - | chr2.1:20282533-20282552 | None:intergenic | 40.0% |
!! | AAAGGAAGTGTTGTGATCAC+TGG | + | chr2.1:20283458-20283477 | MS.gene031393:CDS | 40.0% |
!! | GCCAATTCGTTGATAACTTC+AGG | + | chr2.1:20283657-20283676 | MS.gene031393:CDS | 40.0% |
!! | TAGTGAGAAGCTTGTTGGTT+TGG | + | chr2.1:20284901-20284920 | MS.gene031393:CDS | 40.0% |
!! | TGGTGATGTACTTCTGGAAT+GGG | - | chr2.1:20284382-20284401 | None:intergenic | 40.0% |
!! | TTGGTGATGTACTTCTGGAA+TGG | - | chr2.1:20284383-20284402 | None:intergenic | 40.0% |
!!! | TACATGCCATTTTCCTGTCT+CGG | - | chr2.1:20283525-20283544 | None:intergenic | 40.0% |
AAAATCTGCTGGCATGGCTA+AGG | + | chr2.1:20283586-20283605 | MS.gene031393:CDS | 45.0% | |
AATCTGGTGTTTACTGGAGC+TGG | + | chr2.1:20284798-20284817 | MS.gene031393:CDS | 45.0% | |
ACATTTGCTTCCCTTTACCC+TGG | + | chr2.1:20284296-20284315 | MS.gene031393:CDS | 45.0% | |
ACTGGTGCTTCATCTGGATT+AGG | + | chr2.1:20283476-20283495 | MS.gene031393:CDS | 45.0% | |
AGACGATACCATGAGGAAAC+TGG | + | chr2.1:20284269-20284288 | MS.gene031393:CDS | 45.0% | |
AGAGGCAAGTGATGTAGAGA+AGG | + | chr2.1:20284859-20284878 | MS.gene031393:CDS | 45.0% | |
AGGTGAGTTTGTCAGGATCA+CGG | + | chr2.1:20282918-20282937 | MS.gene031393:intron | 45.0% | |
AGTTCCTCCATGATAGATGG+TGG | + | chr2.1:20284176-20284195 | MS.gene031393:CDS | 45.0% | |
ATCTCCACCATCTATCATGG+AGG | - | chr2.1:20284183-20284202 | None:intergenic | 45.0% | |
CGCGTTTCTCTGCAATATCA+AGG | + | chr2.1:20284016-20284035 | MS.gene031393:intron | 45.0% | |
CTCTACATCACTTGCCTCTT+GGG | - | chr2.1:20284858-20284877 | None:intergenic | 45.0% | |
GAACCTAGATTCACTGCTGA+AGG | + | chr2.1:20283743-20283762 | MS.gene031393:CDS | 45.0% | |
GAATGGAGAAAGAAGCAGGA+AGG | - | chr2.1:20282529-20282548 | None:intergenic | 45.0% | |
GTGTTGGGACAAACCATCTT+GGG | + | chr2.1:20283777-20283796 | MS.gene031393:CDS | 45.0% | |
GTTACCAAATCCTCACCTGA+TGG | + | chr2.1:20283419-20283438 | MS.gene031393:CDS | 45.0% | |
GTTCCATAGACGATACCATG+AGG | + | chr2.1:20284262-20284281 | MS.gene031393:CDS | 45.0% | |
TACGTCTCAGAAGATGAAGC+TGG | + | chr2.1:20284407-20284426 | MS.gene031393:CDS | 45.0% | |
TCTCTACATCACTTGCCTCT+TGG | - | chr2.1:20284859-20284878 | None:intergenic | 45.0% | |
TGAAAACCAGCTATCCCAAG+AGG | + | chr2.1:20284841-20284860 | MS.gene031393:CDS | 45.0% | |
TTAGTATGGCTGTCTGTCAG+TGG | + | chr2.1:20283898-20283917 | MS.gene031393:intron | 45.0% | |
! | AGTGTTGGGACAAACCATCT+TGG | + | chr2.1:20283776-20283795 | MS.gene031393:CDS | 45.0% |
! | CTTTTTGTCGCAATTCCCTC+TGG | - | chr2.1:20283355-20283374 | None:intergenic | 45.0% |
! | GGCATGTAATTATGGCTTGC+AGG | + | chr2.1:20283537-20283556 | MS.gene031393:CDS | 45.0% |
! | TCTTTCACGCCTTTTGCTTG+AGG | + | chr2.1:20283808-20283827 | MS.gene031393:CDS | 45.0% |
! | TGCCACAACAGGCTTGTTTA+GGG | + | chr2.1:20284325-20284344 | MS.gene031393:CDS | 45.0% |
! | TGTTTTCTTGCCATCAGGTG+AGG | - | chr2.1:20283432-20283451 | None:intergenic | 45.0% |
! | TTGCCACAACAGGCTTGTTT+AGG | + | chr2.1:20284324-20284343 | MS.gene031393:CDS | 45.0% |
! | TTTGCTGTCCTTGTATGCCT+TGG | - | chr2.1:20284216-20284235 | None:intergenic | 45.0% |
!! | AAGTCACCAAGGTTAGCCTT+TGG | - | chr2.1:20284122-20284141 | None:intergenic | 45.0% |
!! | ACAAAAAGTCGGTGCTGTGA+GGG | + | chr2.1:20283367-20283386 | MS.gene031393:CDS | 45.0% |
!! | ACACACACCCTTTGGAATGA+CGG | - | chr2.1:20282969-20282988 | None:intergenic | 45.0% |
!! | AGCCTTTGGTGATGTACTTC+TGG | - | chr2.1:20284388-20284407 | None:intergenic | 45.0% |
!! | AGTCACCAAGGTTAGCCTTT+GGG | - | chr2.1:20284121-20284140 | None:intergenic | 45.0% |
!! | ATCATTGTCGGCTCAATCAC+AGG | + | chr2.1:20283866-20283885 | MS.gene031393:CDS | 45.0% |
!! | ATCTTCTGAGACGTAGCCTT+TGG | - | chr2.1:20284402-20284421 | None:intergenic | 45.0% |
!! | GGTGATGTACTTCTGGAATG+GGG | - | chr2.1:20284381-20284400 | None:intergenic | 45.0% |
!! | GTGATGTACTTCTGGAATGG+GGG | - | chr2.1:20284380-20284399 | None:intergenic | 45.0% |
!! | TGATGTACTTCTGGAATGGG+GGG | - | chr2.1:20284379-20284398 | None:intergenic | 45.0% |
!!! | TGGAGATTTTGATGGTGCCA+AGG | + | chr2.1:20284196-20284215 | MS.gene031393:CDS | 45.0% |
AAGGGTAGTCAGATTTGCCC+AGG | - | chr2.1:20283835-20283854 | None:intergenic | 50.0% | |
AGCTGCAAAATCTGCTGGCA+TGG | + | chr2.1:20283580-20283599 | MS.gene031393:CDS | 50.0% | |
ATTAGGCCTAGCCACTGCTA+AGG | + | chr2.1:20283493-20283512 | MS.gene031393:CDS | 50.0% | |
CTCCCTAAACAAGCCTGTTG+TGG | - | chr2.1:20284330-20284349 | None:intergenic | 50.0% | |
CTCTTCTGCATTGAGGTGCA+AGG | + | chr2.1:20282728-20282747 | MS.gene031393:CDS | 50.0% | |
CTGTTGTGGCAATGCAACCA+GGG | - | chr2.1:20284316-20284335 | None:intergenic | 50.0% | |
CTTGCCATCAGGTGAGGATT+TGG | - | chr2.1:20283426-20283445 | None:intergenic | 50.0% | |
CTTTGGCCGAGACAGGAAAA+TGG | + | chr2.1:20283516-20283535 | MS.gene031393:CDS | 50.0% | |
GCAAGAGCTGCAAAATCTGC+TGG | + | chr2.1:20283575-20283594 | MS.gene031393:CDS | 50.0% | |
GCTATCAGGTCGCAATGTCA+AGG | + | chr2.1:20283941-20283960 | MS.gene031393:intron | 50.0% | |
GGCAATGCAACCAGGGTAAA+GGG | - | chr2.1:20284309-20284328 | None:intergenic | 50.0% | |
GGTAACACAAACACCTTGGC+TGG | + | chr2.1:20284086-20284105 | MS.gene031393:intron | 50.0% | |
GTGATCACTGGTGCTTCATC+TGG | + | chr2.1:20283470-20283489 | MS.gene031393:CDS | 50.0% | |
TGATGTAGAGAAGGCTCGCA+AGG | + | chr2.1:20284868-20284887 | MS.gene031393:CDS | 50.0% | |
TGGCAATGCAACCAGGGTAA+AGG | - | chr2.1:20284310-20284329 | None:intergenic | 50.0% | |
TTGCAGCTCTTGCAGCTTTG+AGG | - | chr2.1:20283568-20283587 | None:intergenic | 50.0% | |
! | AGCTGGAAAGAGACTTGCTC+AGG | + | chr2.1:20284424-20284443 | MS.gene031393:CDS | 50.0% |
! | AGGCTAACCTTGGTGACTTG+AGG | + | chr2.1:20284123-20284142 | MS.gene031393:CDS | 50.0% |
! | GCTAACCTTGGTGACTTGAG+GGG | + | chr2.1:20284125-20284144 | MS.gene031393:CDS | 50.0% |
! | GGATTTGGTAACTGCTGGAG+TGG | - | chr2.1:20283411-20283430 | None:intergenic | 50.0% |
! | GGCTAACCTTGGTGACTTGA+GGG | + | chr2.1:20284124-20284143 | MS.gene031393:CDS | 50.0% |
! | GGTGAGGATTTGGTAACTGC+TGG | - | chr2.1:20283416-20283435 | None:intergenic | 50.0% |
! | TGATGGTGCCAAGGCATACA+AGG | + | chr2.1:20284205-20284224 | MS.gene031393:CDS | 50.0% |
!! | GACAAAAAGTCGGTGCTGTG+AGG | + | chr2.1:20283366-20283385 | MS.gene031393:CDS | 50.0% |
!! | GTCACCAAGGTTAGCCTTTG+GGG | - | chr2.1:20284120-20284139 | None:intergenic | 50.0% |
!! | TCACCAAGGTTAGCCTTTGG+GGG | - | chr2.1:20284119-20284138 | None:intergenic | 50.0% |
AGAGAAGGCTCGCAAGGTGT+GGG | + | chr2.1:20284874-20284893 | MS.gene031393:CDS | 55.0% | |
CAAGTCCCCTCAAGTCACCA+AGG | - | chr2.1:20284133-20284152 | None:intergenic | 55.0% | |
CACTTGCCTCTTGGGATAGC+TGG | - | chr2.1:20284850-20284869 | None:intergenic | 55.0% | |
CCAAAGCCTTAGCAGTGGCT+AGG | - | chr2.1:20283502-20283521 | None:intergenic | 55.0% | |
CCTAGCCACTGCTAAGGCTT+TGG | + | chr2.1:20283499-20283518 | MS.gene031393:CDS | 55.0% | |
CCTGGTTGCATTGCCACAAC+AGG | + | chr2.1:20284314-20284333 | MS.gene031393:CDS | 55.0% | |
CCTGTTGTGGCAATGCAACC+AGG | - | chr2.1:20284317-20284336 | None:intergenic | 55.0% | |
GAACGCTGTCGAGAGAGGAA+AGG | - | chr2.1:20283637-20283656 | None:intergenic | 55.0% | |
GACTTGCCGGTGGCTTGAAT+GGG | + | chr2.1:20284147-20284166 | MS.gene031393:CDS | 55.0% | |
GGCTGGAAATGTACCCCCAA+AGG | + | chr2.1:20284103-20284122 | MS.gene031393:CDS | 55.0% | |
GTACCCCCAAAGGCTAACCT+TGG | + | chr2.1:20284113-20284132 | MS.gene031393:CDS | 55.0% | |
GTTGAGCCCATTCAAGCCAC+CGG | - | chr2.1:20284156-20284175 | None:intergenic | 55.0% | |
TAGAGAAGGCTCGCAAGGTG+TGG | + | chr2.1:20284873-20284892 | MS.gene031393:CDS | 55.0% | |
TGCCCAGGTCCTCAAGCAAA+AGG | - | chr2.1:20283820-20283839 | None:intergenic | 55.0% | |
! | ACGCCTTTTGCTTGAGGACC+TGG | + | chr2.1:20283814-20283833 | MS.gene031393:CDS | 55.0% |
! | CAGGCGATCTGAAATGCCGT+TGG | + | chr2.1:20283676-20283695 | MS.gene031393:CDS | 55.0% |
! | CGCCTTTTGCTTGAGGACCT+GGG | + | chr2.1:20283815-20283834 | MS.gene031393:CDS | 55.0% |
! | TGGGGGTACATTTCCAGCCA+AGG | - | chr2.1:20284102-20284121 | None:intergenic | 55.0% |
CTCGGCCAAAGCCTTAGCAG+TGG | - | chr2.1:20283507-20283526 | None:intergenic | 60.0% | |
GGACTTGCCGGTGGCTTGAA+TGG | + | chr2.1:20284146-20284165 | MS.gene031393:CDS | 60.0% | |
GGTGACTTGAGGGGACTTGC+CGG | + | chr2.1:20284134-20284153 | MS.gene031393:CDS | 60.0% | |
TGCTGTGAGGGCAGAGACAG+CGG | + | chr2.1:20283379-20283398 | MS.gene031393:CDS | 60.0% | |
TTGGCGAACGCTGTCGAGAG+AGG | - | chr2.1:20283642-20283661 | None:intergenic | 60.0% | |
! | GCTAAGGCTTTGGCCGAGAC+AGG | + | chr2.1:20283509-20283528 | MS.gene031393:CDS | 60.0% |
GACTTGAGGGGACTTGCCGG+TGG | + | chr2.1:20284137-20284156 | MS.gene031393:CDS | 65.0% | |
TGCATGCGCACGGGTCGCGC+TGG | - | chr2.1:20283256-20283275 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.1 | gene | 20282503 | 20284928 | 20282503 | ID=MS.gene031393 |
chr2.1 | mRNA | 20282503 | 20284928 | 20282503 | ID=MS.gene031393.t1;Parent=MS.gene031393 |
chr2.1 | exon | 20282503 | 20282556 | 20282503 | ID=MS.gene031393.t1.exon1;Parent=MS.gene031393.t1 |
chr2.1 | CDS | 20282503 | 20282556 | 20282503 | ID=cds.MS.gene031393.t1;Parent=MS.gene031393.t1 |
chr2.1 | exon | 20282651 | 20282749 | 20282651 | ID=MS.gene031393.t1.exon2;Parent=MS.gene031393.t1 |
chr2.1 | CDS | 20282651 | 20282749 | 20282651 | ID=cds.MS.gene031393.t1;Parent=MS.gene031393.t1 |
chr2.1 | exon | 20283356 | 20283887 | 20283356 | ID=MS.gene031393.t1.exon3;Parent=MS.gene031393.t1 |
chr2.1 | CDS | 20283356 | 20283887 | 20283356 | ID=cds.MS.gene031393.t1;Parent=MS.gene031393.t1 |
chr2.1 | exon | 20284087 | 20284445 | 20284087 | ID=MS.gene031393.t1.exon4;Parent=MS.gene031393.t1 |
chr2.1 | CDS | 20284087 | 20284445 | 20284087 | ID=cds.MS.gene031393.t1;Parent=MS.gene031393.t1 |
chr2.1 | exon | 20284773 | 20284928 | 20284773 | ID=MS.gene031393.t1.exon5;Parent=MS.gene031393.t1 |
chr2.1 | CDS | 20284773 | 20284928 | 20284773 | ID=cds.MS.gene031393.t1;Parent=MS.gene031393.t1 |
Gene Sequence |
Protein sequence |