Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene069371.t1 | XP_013464736.1 | 98.5 | 399 | 6 | 0 | 1 | 399 | 1 | 399 | 3.20E-219 | 770.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene069371.t1 | Q01289 | 92.8 | 400 | 27 | 2 | 1 | 399 | 1 | 399 | 1.8e-207 | 723.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene069371.t1 | A0A072VAY8 | 98.5 | 399 | 6 | 0 | 1 | 399 | 1 | 399 | 2.3e-219 | 770.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene059858 | MS.gene069371 | PPI |
MS.gene069371 | MS.gene031393 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene069371.t1 | MTR_2g079710 | 98.496 | 399 | 6 | 0 | 1 | 399 | 1 | 399 | 0.0 | 811 |
MS.gene069371.t1 | MTR_1g068970 | 34.286 | 315 | 168 | 13 | 88 | 396 | 36 | 317 | 2.26e-33 | 127 |
MS.gene069371.t1 | MTR_7g099850 | 32.615 | 325 | 161 | 14 | 88 | 396 | 36 | 318 | 1.75e-31 | 122 |
MS.gene069371.t1 | MTR_1g100395 | 29.206 | 315 | 184 | 10 | 88 | 396 | 31 | 312 | 4.21e-31 | 121 |
MS.gene069371.t1 | MTR_6g053550 | 31.111 | 315 | 177 | 11 | 90 | 396 | 41 | 323 | 8.44e-31 | 120 |
MS.gene069371.t1 | MTR_6g053600 | 35.808 | 229 | 117 | 6 | 88 | 310 | 25 | 229 | 5.73e-29 | 114 |
MS.gene069371.t1 | MTR_8g098415 | 32.500 | 320 | 171 | 13 | 88 | 398 | 31 | 314 | 1.38e-28 | 114 |
MS.gene069371.t1 | MTR_8g098415 | 32.817 | 323 | 160 | 13 | 88 | 395 | 31 | 311 | 1.55e-28 | 114 |
MS.gene069371.t1 | MTR_1g100335 | 30.794 | 315 | 179 | 13 | 88 | 396 | 31 | 312 | 2.47e-28 | 113 |
MS.gene069371.t1 | MTR_3g077410 | 27.302 | 315 | 191 | 11 | 88 | 396 | 39 | 321 | 1.00e-27 | 112 |
MS.gene069371.t1 | MTR_1g100315 | 29.712 | 313 | 185 | 10 | 88 | 396 | 31 | 312 | 5.18e-27 | 110 |
MS.gene069371.t1 | MTR_4g105310 | 31.624 | 234 | 133 | 8 | 88 | 317 | 50 | 260 | 5.76e-27 | 108 |
MS.gene069371.t1 | MTR_4g105310 | 28.797 | 316 | 185 | 12 | 88 | 396 | 50 | 332 | 7.97e-27 | 110 |
MS.gene069371.t1 | MTR_1g100335 | 32.941 | 255 | 141 | 9 | 88 | 337 | 31 | 260 | 1.90e-26 | 107 |
MS.gene069371.t1 | MTR_1g100335 | 34.934 | 229 | 121 | 8 | 88 | 311 | 31 | 236 | 2.81e-26 | 106 |
MS.gene069371.t1 | MTR_1g100305 | 29.936 | 314 | 183 | 11 | 88 | 396 | 31 | 312 | 1.33e-25 | 105 |
MS.gene069371.t1 | MTR_1g068970 | 33.462 | 260 | 141 | 9 | 140 | 397 | 22 | 251 | 5.68e-25 | 102 |
MS.gene069371.t1 | MTR_8g099995 | 27.439 | 328 | 202 | 11 | 73 | 396 | 26 | 321 | 3.38e-24 | 102 |
MS.gene069371.t1 | MTR_8g098415 | 33.953 | 215 | 109 | 7 | 88 | 295 | 31 | 219 | 2.02e-22 | 95.1 |
MS.gene069371.t1 | MTR_8g098415 | 32.061 | 262 | 138 | 12 | 140 | 395 | 27 | 254 | 1.23e-20 | 90.9 |
MS.gene069371.t1 | MTR_3g091070 | 26.506 | 332 | 193 | 12 | 75 | 398 | 31 | 319 | 2.32e-16 | 79.7 |
MS.gene069371.t1 | MTR_3g009190 | 26.220 | 328 | 197 | 12 | 86 | 398 | 62 | 359 | 3.33e-14 | 73.9 |
MS.gene069371.t1 | MTR_3g009190 | 26.220 | 328 | 197 | 12 | 86 | 398 | 80 | 377 | 3.35e-14 | 73.9 |
MS.gene069371.t1 | MTR_6g453040 | 26.101 | 318 | 202 | 10 | 90 | 398 | 44 | 337 | 2.85e-13 | 70.9 |
MS.gene069371.t1 | MTR_6g081020 | 29.179 | 329 | 183 | 14 | 88 | 398 | 63 | 359 | 4.81e-13 | 70.5 |
MS.gene069371.t1 | MTR_6g453040 | 29.108 | 213 | 125 | 6 | 86 | 291 | 62 | 255 | 1.95e-12 | 67.8 |
MS.gene069371.t1 | MTR_3g009190 | 24.923 | 325 | 199 | 12 | 89 | 398 | 64 | 358 | 1.02e-11 | 66.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene069371.t1 | AT5G54190 | 82.716 | 405 | 64 | 2 | 1 | 399 | 1 | 405 | 0.0 | 687 |
MS.gene069371.t1 | AT4G27440 | 80.846 | 402 | 73 | 2 | 1 | 399 | 1 | 401 | 0.0 | 652 |
MS.gene069371.t1 | AT4G27440 | 80.846 | 402 | 73 | 2 | 1 | 399 | 1 | 401 | 0.0 | 652 |
MS.gene069371.t1 | AT1G03630 | 78.412 | 403 | 81 | 4 | 1 | 399 | 1 | 401 | 0.0 | 626 |
MS.gene069371.t1 | AT1G03630 | 78.304 | 401 | 83 | 4 | 1 | 399 | 1 | 399 | 0.0 | 624 |
MS.gene069371.t1 | AT5G54190 | 90.493 | 284 | 27 | 0 | 116 | 399 | 1 | 284 | 0.0 | 546 |
MS.gene069371.t1 | AT4G23430 | 29.814 | 322 | 172 | 10 | 88 | 395 | 31 | 312 | 1.68e-30 | 119 |
MS.gene069371.t1 | AT4G23430 | 30.435 | 322 | 168 | 11 | 88 | 395 | 31 | 310 | 1.25e-29 | 117 |
MS.gene069371.t1 | AT4G23420 | 31.013 | 316 | 176 | 13 | 88 | 395 | 48 | 329 | 2.31e-29 | 117 |
MS.gene069371.t1 | AT4G23420 | 31.013 | 316 | 176 | 13 | 88 | 395 | 31 | 312 | 2.97e-29 | 116 |
MS.gene069371.t1 | AT4G23420 | 31.013 | 316 | 176 | 13 | 88 | 395 | 31 | 312 | 2.97e-29 | 116 |
MS.gene069371.t1 | AT4G23420 | 33.613 | 238 | 128 | 9 | 88 | 318 | 31 | 245 | 1.79e-27 | 110 |
MS.gene069371.t1 | AT4G23420 | 33.613 | 238 | 128 | 9 | 88 | 318 | 31 | 245 | 2.44e-27 | 109 |
MS.gene069371.t1 | AT2G37540 | 34.231 | 260 | 131 | 12 | 88 | 335 | 35 | 266 | 3.41e-27 | 110 |
MS.gene069371.t1 | AT2G37540 | 35.021 | 237 | 117 | 11 | 88 | 315 | 35 | 243 | 1.03e-26 | 107 |
MS.gene069371.t1 | AT4G11410 | 30.476 | 315 | 182 | 10 | 88 | 397 | 31 | 313 | 1.24e-26 | 108 |
MS.gene069371.t1 | AT4G24050 | 30.581 | 327 | 175 | 13 | 84 | 396 | 32 | 320 | 5.67e-26 | 107 |
MS.gene069371.t1 | AT4G11410 | 33.898 | 236 | 125 | 7 | 88 | 317 | 31 | 241 | 5.39e-25 | 103 |
MS.gene069371.t1 | AT5G50130 | 30.126 | 239 | 138 | 8 | 88 | 321 | 38 | 252 | 8.30e-25 | 102 |
MS.gene069371.t1 | AT5G50130 | 30.962 | 239 | 137 | 9 | 88 | 321 | 38 | 253 | 1.47e-24 | 102 |
MS.gene069371.t1 | AT5G02540 | 29.605 | 304 | 173 | 14 | 100 | 396 | 47 | 316 | 2.79e-24 | 102 |
MS.gene069371.t1 | AT4G24050 | 32.218 | 239 | 122 | 8 | 84 | 310 | 32 | 242 | 3.09e-24 | 101 |
MS.gene069371.t1 | AT5G50130 | 30.962 | 239 | 137 | 9 | 88 | 321 | 38 | 253 | 7.62e-24 | 101 |
MS.gene069371.t1 | AT5G50130 | 30.126 | 239 | 138 | 8 | 88 | 321 | 38 | 252 | 9.21e-24 | 101 |
MS.gene069371.t1 | AT5G50130 | 30.962 | 239 | 137 | 9 | 88 | 321 | 38 | 253 | 1.56e-23 | 100 |
MS.gene069371.t1 | AT5G50130 | 30.085 | 236 | 136 | 8 | 91 | 321 | 8 | 219 | 2.99e-23 | 99.4 |
MS.gene069371.t1 | AT5G50130 | 30.932 | 236 | 135 | 9 | 91 | 321 | 8 | 220 | 5.43e-23 | 98.6 |
MS.gene069371.t1 | AT5G50130 | 30.085 | 236 | 136 | 8 | 91 | 321 | 8 | 219 | 6.16e-23 | 98.2 |
MS.gene069371.t1 | AT5G50130 | 30.932 | 236 | 135 | 9 | 91 | 321 | 8 | 220 | 1.03e-22 | 97.4 |
MS.gene069371.t1 | AT1G64590 | 29.102 | 323 | 185 | 13 | 84 | 396 | 32 | 320 | 2.29e-22 | 97.4 |
MS.gene069371.t1 | AT4G23430 | 27.329 | 322 | 170 | 11 | 88 | 395 | 31 | 302 | 3.09e-21 | 94.0 |
MS.gene069371.t1 | AT4G23430 | 27.950 | 322 | 166 | 12 | 88 | 395 | 31 | 300 | 2.36e-20 | 91.3 |
MS.gene069371.t1 | AT4G09750 | 28.926 | 242 | 136 | 8 | 88 | 325 | 45 | 254 | 7.82e-19 | 87.0 |
MS.gene069371.t1 | AT4G27760 | 30.183 | 328 | 179 | 15 | 88 | 398 | 59 | 353 | 9.10e-17 | 81.6 |
MS.gene069371.t1 | AT5G53100 | 29.819 | 332 | 186 | 12 | 84 | 398 | 42 | 343 | 9.33e-16 | 78.6 |
MS.gene069371.t1 | AT5G53090 | 29.254 | 335 | 183 | 14 | 83 | 398 | 53 | 352 | 6.31e-15 | 76.3 |
Find 108 sgRNAs with CRISPR-Local
Find 195 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCATTGTCTGATTCTTTAAA+AGG | 0.178013 | 2.3:+17994552 | MS.gene069371:CDS |
GGTGACTTGAGGGGACTTTC+CGG | 0.223210 | 2.3:+17996223 | MS.gene069371:CDS |
TTTCCTCATGGTATCTTCTA+TGG | 0.237045 | 2.3:-17996354 | None:intergenic |
GAACAAGAACAAACCTCTTT+TGG | 0.237389 | 2.3:-17994404 | None:intergenic |
TTGCCACAACAGGCTTGTTT+AGG | 0.258724 | 2.3:+17996413 | MS.gene069371:CDS |
TAACAAAATCTGGTGTTTAC+TGG | 0.260185 | 2.3:+17996844 | MS.gene069371:CDS |
AGGAAAATGGCATGTAATTA+TGG | 0.286577 | 2.3:+17995618 | MS.gene069371:CDS |
AGCCTTTGGTGATGTACTTC+TGG | 0.301562 | 2.3:-17996474 | None:intergenic |
CTTGCCATCAGGTGAGGATT+TGG | 0.306599 | 2.3:-17995512 | None:intergenic |
GTGATCACTGGTGCTTCATC+TGG | 0.327170 | 2.3:+17995559 | MS.gene069371:CDS |
AGAAGATACCATGAGGAAAC+TGG | 0.335497 | 2.3:+17996358 | MS.gene069371:CDS |
GACTTTCCGGTGGTTTGAAT+GGG | 0.346525 | 2.3:+17996236 | MS.gene069371:CDS |
TGCCACAACAGGCTTGTTTA+GGG | 0.348200 | 2.3:+17996414 | MS.gene069371:CDS |
GGCATGTAATTATGGCTTGC+AGG | 0.351136 | 2.3:+17995626 | MS.gene069371:CDS |
GGACTTTCCGGTGGTTTGAA+TGG | 0.351640 | 2.3:+17996235 | MS.gene069371:CDS |
GATCCAAGCTTAACAAAATC+TGG | 0.356495 | 2.3:+17996834 | MS.gene069371:CDS |
TTGCAGCTCTTGCAGCTTTG+AGG | 0.361561 | 2.3:-17995654 | None:intergenic |
TAGTGAGAAGCTTGTTGGTT+TGG | 0.367676 | 2.3:+17996953 | MS.gene069371:CDS |
CTTTGGCTGAGACAGGAAAA+TGG | 0.382816 | 2.3:+17995605 | MS.gene069371:CDS |
ATCTTCTGAGACGTAGCCTT+TGG | 0.388065 | 2.3:-17996488 | None:intergenic |
CCTAGCCACTGCTAAGGCTT+TGG | 0.395087 | 2.3:+17995588 | MS.gene069371:CDS |
TTCTTTCTCCATTCCAAAAG+AGG | 0.396884 | 2.3:+17994391 | MS.gene069371:CDS |
GAGGTTAGTGAGAAGCTTGT+TGG | 0.415076 | 2.3:+17996948 | MS.gene069371:CDS |
CCTGGTTGCATTGCCACAAC+AGG | 0.418620 | 2.3:+17996403 | MS.gene069371:CDS |
TCAAAGCGCTTGATCATTGT+CGG | 0.433806 | 2.3:+17995943 | MS.gene069371:CDS |
GCCTGAAGTTATCCACGAAT+TGG | 0.436099 | 2.3:-17995747 | None:intergenic |
CGACAGCGTTCGCCAATTCG+TGG | 0.438664 | 2.3:+17995735 | MS.gene069371:CDS |
GCCAATTCGTGGATAACTTC+AGG | 0.441756 | 2.3:+17995746 | MS.gene069371:CDS |
AATCCTTCAGCAGTGAATCT+AGG | 0.447263 | 2.3:-17995835 | None:intergenic |
AACAGTTCATCCATGATAGA+TGG | 0.450988 | 2.3:+17996262 | MS.gene069371:CDS |
GCAAGAGCTGCAAAATCTGC+TGG | 0.454061 | 2.3:+17995664 | MS.gene069371:CDS |
AGTGTTGGGACAAACCATCT+TGG | 0.454856 | 2.3:+17995865 | MS.gene069371:CDS |
AATCTGGTGTTTACTGGAGC+TGG | 0.460304 | 2.3:+17996850 | MS.gene069371:CDS |
TTTGCTGTCCTTGTATGCCT+TGG | 0.462610 | 2.3:-17996302 | None:intergenic |
GGCTAACCTTGGTGACTTGA+GGG | 0.462961 | 2.3:+17996213 | MS.gene069371:CDS |
ACAATGATCAAGCGCTTTGA+AGG | 0.464579 | 2.3:-17995940 | None:intergenic |
GGCAATGCAACCAGGGTAAA+GGG | 0.470475 | 2.3:-17996395 | None:intergenic |
GCTAAGGCTTTGGCTGAGAC+AGG | 0.476090 | 2.3:+17995598 | MS.gene069371:CDS |
TGGCAATGCAACCAGGGTAA+AGG | 0.479689 | 2.3:-17996396 | None:intergenic |
AAAATCTCCACCATCTATCA+TGG | 0.480512 | 2.3:-17996272 | None:intergenic |
GGTGAGGATTTGGTAACTGC+TGG | 0.480958 | 2.3:-17995502 | None:intergenic |
TGATGGTGCCAAGGCATACA+AGG | 0.481815 | 2.3:+17996294 | MS.gene069371:CDS |
ACTGGTGCTTCATCTGGATT+AGG | 0.482488 | 2.3:+17995565 | MS.gene069371:CDS |
CACTTGCCTCTTGAGATAGC+TGG | 0.486214 | 2.3:-17996899 | None:intergenic |
TTGGTGATGTACTTCTGGAA+TGG | 0.487975 | 2.3:-17996469 | None:intergenic |
GTGTTGGGACAAACCATCTT+GGG | 0.488124 | 2.3:+17995866 | MS.gene069371:CDS |
ATCATTGTCGGCTCAATCAC+AGG | 0.490533 | 2.3:+17995955 | MS.gene069371:CDS |
GGTAACACAAACACATTGGC+TGG | 0.498062 | 2.3:+17996175 | MS.gene069371:intron |
AAGGATTTGAGCTTAGTGTT+GGG | 0.500150 | 2.3:+17995851 | MS.gene069371:CDS |
TTTGGAATGGAGAAAGAAGC+AGG | 0.504002 | 2.3:-17994386 | None:intergenic |
TGCCCAGGTCCTCAAGCAAA+AGG | 0.504429 | 2.3:-17995906 | None:intergenic |
AAGTCACCAAGGTTAGCCTT+TGG | 0.507323 | 2.3:-17996208 | None:intergenic |
CCTGTTGTGGCAATGCAACC+AGG | 0.511779 | 2.3:-17996403 | None:intergenic |
AGCTGCAAAATCTGCTGGCA+TGG | 0.524763 | 2.3:+17995669 | MS.gene069371:CDS |
TGTTTACTTGCCAACTGCTA+AGG | 0.526344 | 2.3:+17995810 | MS.gene069371:CDS |
GAAGGATTTGAGCTTAGTGT+TGG | 0.530033 | 2.3:+17995850 | MS.gene069371:CDS |
AATCTAGGTTCCTTAGCAGT+TGG | 0.534992 | 2.3:-17995820 | None:intergenic |
AGGCTAACCTTGGTGACTTG+AGG | 0.541106 | 2.3:+17996212 | MS.gene069371:CDS |
AAAATCTGCTGGCATGGCTA+AGG | 0.541326 | 2.3:+17995675 | MS.gene069371:CDS |
AGAGGCAAGTGATGTAGAGA+AGG | 0.541660 | 2.3:+17996911 | MS.gene069371:CDS |
GCATGTAATTATGGCTTGCA+GGG | 0.542565 | 2.3:+17995627 | MS.gene069371:CDS |
GAACCTAGATTCACTGCTGA+AGG | 0.543294 | 2.3:+17995832 | MS.gene069371:CDS |
TCACCAAGGTTAGCCTTTGG+CGG | 0.544273 | 2.3:-17996205 | None:intergenic |
CCAAAGCCTTAGCAGTGGCT+AGG | 0.549092 | 2.3:-17995588 | None:intergenic |
AAGGGTAGTCAGATTTGCCC+AGG | 0.549484 | 2.3:-17995921 | None:intergenic |
CAGGCGATCTGAAATGCCAT+TGG | 0.549825 | 2.3:+17995765 | MS.gene069371:CDS |
ACATTTGCTTCCCTTTACCC+TGG | 0.554504 | 2.3:+17996385 | MS.gene069371:CDS |
GGCTGGAAATGTACCGCCAA+AGG | 0.555963 | 2.3:+17996192 | MS.gene069371:CDS |
AAAGATTGGTGCATCTCTCA+AGG | 0.556983 | 2.3:+17994509 | MS.gene069371:CDS |
ATTTCAGCTCGTCTGCATTG+AGG | 0.560994 | 2.3:+17994577 | MS.gene069371:CDS |
TAGAGAAGGCTCGCAAGGTG+TGG | 0.562086 | 2.3:+17996925 | MS.gene069371:CDS |
AGCAGGAAAGAGACTTGCTC+AGG | 0.563998 | 2.3:+17996513 | MS.gene069371:CDS |
AAAGGAAGTGTTGTGATCAC+TGG | 0.566260 | 2.3:+17995547 | MS.gene069371:CDS |
TGCTGTGAGGGCAGAGACAG+CGG | 0.567342 | 2.3:+17995468 | MS.gene069371:CDS |
ATGTGATTCCAGTTTCCTCA+TGG | 0.579597 | 2.3:-17996366 | None:intergenic |
TGATGTAGAGAAGGCTCGCA+AGG | 0.581297 | 2.3:+17996920 | MS.gene069371:CDS |
CTCCCTAAACAAGCCTGTTG+TGG | 0.583907 | 2.3:-17996416 | None:intergenic |
GGCAAGAAAACATTGAGGAA+AGG | 0.585122 | 2.3:+17995529 | MS.gene069371:CDS |
AGAGAAGGCTCGCAAGGTGT+GGG | 0.587119 | 2.3:+17996926 | MS.gene069371:CDS |
TACGTCTCAGAAGATGAAGC+AGG | 0.589229 | 2.3:+17996496 | MS.gene069371:CDS |
AAAGAAGAAAATGCCCAAGA+TGG | 0.591489 | 2.3:-17995879 | None:intergenic |
TGAGAACCAGCTATCTCAAG+AGG | 0.592594 | 2.3:+17996893 | MS.gene069371:CDS |
TTGGCGAACGCTGTCGAGAG+AGG | 0.596671 | 2.3:-17995728 | None:intergenic |
GTACCGCCAAAGGCTAACCT+TGG | 0.600640 | 2.3:+17996202 | MS.gene069371:CDS |
CTCGTCTGCATTGAGGTGCA+AGG | 0.615736 | 2.3:+17994584 | MS.gene069371:CDS |
GGATTTGGTAACTGCTGGAG+TGG | 0.616729 | 2.3:-17995497 | None:intergenic |
CAATGATCAAGCGCTTTGAA+GGG | 0.619633 | 2.3:-17995939 | None:intergenic |
GAACGCTGTCGAGAGAGGAA+AGG | 0.620107 | 2.3:-17995723 | None:intergenic |
GTTACCAAATCCTCACCTGA+TGG | 0.621840 | 2.3:+17995508 | MS.gene069371:CDS |
AGTTCATCCATGATAGATGG+TGG | 0.621912 | 2.3:+17996265 | MS.gene069371:CDS |
GTGATGTACTTCTGGAATGG+AGG | 0.621942 | 2.3:-17996466 | None:intergenic |
ATTAGGCCTAGCCACTGCTA+AGG | 0.622076 | 2.3:+17995582 | MS.gene069371:CDS |
GTTAAGCCCATTCAAACCAC+CGG | 0.622228 | 2.3:-17996242 | None:intergenic |
TTGTTAACAAGCACATCCAA+TGG | 0.623509 | 2.3:-17995781 | None:intergenic |
AACAGGTAACACAAACACAT+TGG | 0.626679 | 2.3:+17996171 | MS.gene069371:intron |
TTCCAGAAGTACATCACCAA+AGG | 0.629677 | 2.3:+17996472 | MS.gene069371:CDS |
CTGTTGTGGCAATGCAACCA+GGG | 0.640819 | 2.3:-17996402 | None:intergenic |
GACTTGAGGGGACTTTCCGG+TGG | 0.641320 | 2.3:+17996226 | MS.gene069371:CDS |
GAAGGCTCGCAAGGTGTGGG+AGG | 0.649657 | 2.3:+17996929 | MS.gene069371:CDS |
GCTAACCTTGGTGACTTGAG+GGG | 0.650668 | 2.3:+17996214 | MS.gene069371:CDS |
CTCAGCCAAAGCCTTAGCAG+TGG | 0.659265 | 2.3:-17995593 | None:intergenic |
TGATGTACTTCTGGAATGGA+GGG | 0.663764 | 2.3:-17996465 | None:intergenic |
AGGGAATAGAGTTCTGAACA+AGG | 0.666646 | 2.3:-17996446 | None:intergenic |
GAATGGAGAAAGAAGCAGGA+AGG | 0.672736 | 2.3:-17994382 | None:intergenic |
GGGAATAGAGTTCTGAACAA+GGG | 0.682576 | 2.3:-17996445 | None:intergenic |
CTGATGGCAAGAAAACATTG+AGG | 0.691289 | 2.3:+17995524 | MS.gene069371:CDS |
AAAGTCCCCTCAAGTCACCA+AGG | 0.705774 | 2.3:-17996219 | None:intergenic |
GTTCCATAGAAGATACCATG+AGG | 0.730261 | 2.3:+17996351 | MS.gene069371:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAGTGAAATATATTGTATT+GGG | - | chr2.3:17995297-17995316 | None:intergenic | 15.0% |
!! | AATTAAAAACACTCATAATT+TGG | - | chr2.3:17994885-17994904 | None:intergenic | 15.0% |
!! | ATTAAAAACACTCATAATTT+GGG | - | chr2.3:17994884-17994903 | None:intergenic | 15.0% |
!! | ATTTAGTGTTATATTGTATT+GGG | - | chr2.3:17995256-17995275 | None:intergenic | 15.0% |
!! | TATTTAGTGTTATATTGTAT+TGG | - | chr2.3:17995257-17995276 | None:intergenic | 15.0% |
!!! | TAAGAAAAGTGTATAAATAA+AGG | - | chr2.3:17995322-17995341 | None:intergenic | 15.0% |
!! | GAAAGTGAAATATATTGTAT+TGG | - | chr2.3:17995298-17995317 | None:intergenic | 20.0% |
!! | TGTATAAATGTAAAGAATTC+AGG | + | chr2.3:17994755-17994774 | MS.gene069371:intron | 20.0% |
!!! | AATTTGGAAAATGTTTTTGT+AGG | + | chr2.3:17994485-17994504 | MS.gene069371:intron | 20.0% |
!!! | ATTATTTTCATCAGATATCA+AGG | + | chr2.3:17996653-17996672 | MS.gene069371:intron | 20.0% |
!!! | ATTTGGAAAATGTTTTTGTA+GGG | + | chr2.3:17994486-17994505 | MS.gene069371:intron | 20.0% |
!!! | GACACTTTTTTTTAGAAAAT+GGG | - | chr2.3:17995187-17995206 | None:intergenic | 20.0% |
! | AATAATCTGAAAGCAACTTA+TGG | - | chr2.3:17996639-17996658 | None:intergenic | 25.0% |
! | GTATCTTCATTTCTCATATA+TGG | + | chr2.3:17996782-17996801 | MS.gene069371:intron | 25.0% |
! | TCATTGTCTGATTCTTTAAA+AGG | + | chr2.3:17994552-17994571 | MS.gene069371:CDS | 25.0% |
! | TCCTCAAAATATTAGTACAT+GGG | + | chr2.3:17994967-17994986 | MS.gene069371:intron | 25.0% |
! | TGATAATTGAGCTGAAAATT+TGG | + | chr2.3:17994469-17994488 | MS.gene069371:intron | 25.0% |
! | TGATTGTGTATGAATTAAAC+AGG | + | chr2.3:17996154-17996173 | MS.gene069371:intron | 25.0% |
! | TTATTCAAAAGAATTGAGGA+AGG | + | chr2.3:17994845-17994864 | MS.gene069371:intron | 25.0% |
! | TTCCTCAAAATATTAGTACA+TGG | + | chr2.3:17994966-17994985 | MS.gene069371:intron | 25.0% |
!! | TGTGTTATTCAAAAGAATTG+AGG | + | chr2.3:17994841-17994860 | MS.gene069371:intron | 25.0% |
!! | TTGAAATGAGTCAGTTATTT+TGG | - | chr2.3:17995210-17995229 | None:intergenic | 25.0% |
!!! | AATGATTTTTTACTGCTATC+AGG | + | chr2.3:17996016-17996035 | MS.gene069371:intron | 25.0% |
!!! | GGACACTTTTTTTTAGAAAA+TGG | - | chr2.3:17995188-17995207 | None:intergenic | 25.0% |
!!! | GTACTAATATTTTGAGGAAT+TGG | - | chr2.3:17994965-17994984 | None:intergenic | 25.0% |
!!! | TGAAATGAGTCAGTTATTTT+GGG | - | chr2.3:17995209-17995228 | None:intergenic | 25.0% |
AAATTCACTGTCATTCCAAA+GGG | + | chr2.3:17994816-17994835 | MS.gene069371:intron | 30.0% | |
ACAATGTCCACGAAAAATAA+AGG | - | chr2.3:17995396-17995415 | None:intergenic | 30.0% | |
ACAGGTATAGTTCATTAGTA+TGG | + | chr2.3:17995973-17995992 | MS.gene069371:intron | 30.0% | |
AGGAAAATGGCATGTAATTA+TGG | + | chr2.3:17995618-17995637 | MS.gene069371:CDS | 30.0% | |
CAATGTCCACGAAAAATAAA+GGG | - | chr2.3:17995395-17995414 | None:intergenic | 30.0% | |
CAGTGAATTTGACAAAATCA+AGG | - | chr2.3:17994806-17994825 | None:intergenic | 30.0% | |
TAACAAAATCTGGTGTTTAC+TGG | + | chr2.3:17996844-17996863 | MS.gene069371:CDS | 30.0% | |
TTTGTGTGAAAAACCAAAGT+AGG | + | chr2.3:17995343-17995362 | MS.gene069371:intron | 30.0% | |
! | ACCCATGTACTAATATTTTG+AGG | - | chr2.3:17994971-17994990 | None:intergenic | 30.0% |
! | CTAAAAAGTGCATGAATCAT+TGG | + | chr2.3:17996757-17996776 | MS.gene069371:intron | 30.0% |
!! | ATGTTTTTGTAGGGAAAGAT+TGG | + | chr2.3:17994495-17994514 | MS.gene069371:intron | 30.0% |
!! | TTTTGTTTATCTCTACCAGA+GGG | + | chr2.3:17995426-17995445 | MS.gene069371:intron | 30.0% |
AAAATCTCCACCATCTATCA+TGG | - | chr2.3:17996275-17996294 | None:intergenic | 35.0% | |
AAAGAAGAAAATGCCCAAGA+TGG | - | chr2.3:17995882-17995901 | None:intergenic | 35.0% | |
AACAGGTAACACAAACACAT+TGG | + | chr2.3:17996171-17996190 | MS.gene069371:intron | 35.0% | |
AACAGTTCATCCATGATAGA+TGG | + | chr2.3:17996262-17996281 | MS.gene069371:CDS | 35.0% | |
AAGGATTTGAGCTTAGTGTT+GGG | + | chr2.3:17995851-17995870 | MS.gene069371:CDS | 35.0% | |
AATATACATATGCATGCGCA+CGG | - | chr2.3:17995123-17995142 | None:intergenic | 35.0% | |
AGAAAATGGGTCAGTTATTC+CGG | - | chr2.3:17995174-17995193 | None:intergenic | 35.0% | |
AGATGTGAGTGTTATGTTTG+TGG | + | chr2.3:17994917-17994936 | MS.gene069371:intron | 35.0% | |
CAAAGTAGGTCAATTAAACC+GGG | + | chr2.3:17995357-17995376 | MS.gene069371:intron | 35.0% | |
CAAATTCACTGTCATTCCAA+AGG | + | chr2.3:17994815-17994834 | MS.gene069371:intron | 35.0% | |
CCAAAGTAGGTCAATTAAAC+CGG | + | chr2.3:17995356-17995375 | MS.gene069371:intron | 35.0% | |
GATCCAAGCTTAACAAAATC+TGG | + | chr2.3:17996834-17996853 | MS.gene069371:CDS | 35.0% | |
GCTAATAGCAATAACACTCA+TGG | + | chr2.3:17996725-17996744 | MS.gene069371:intron | 35.0% | |
GGTAACTGAAAACAAAAGCT+TGG | + | chr2.3:17994605-17994624 | MS.gene069371:intron | 35.0% | |
TTCAAAAGAATTGAGGAAGG+AGG | + | chr2.3:17994848-17994867 | MS.gene069371:intron | 35.0% | |
TTCTTTCTCCATTCCAAAAG+AGG | + | chr2.3:17994391-17994410 | MS.gene069371:CDS | 35.0% | |
TTGTTAACAAGCACATCCAA+TGG | - | chr2.3:17995784-17995803 | None:intergenic | 35.0% | |
TTTCCTCATGGTATCTTCTA+TGG | - | chr2.3:17996357-17996376 | None:intergenic | 35.0% | |
TTTGAATAACACACACCCTT+TGG | - | chr2.3:17994834-17994853 | None:intergenic | 35.0% | |
! | ACACCAGATTTTGTTAAGCT+TGG | - | chr2.3:17996840-17996859 | None:intergenic | 35.0% |
! | GAACAAGAACAAACCTCTTT+TGG | - | chr2.3:17994407-17994426 | None:intergenic | 35.0% |
! | TTAAGTTGCTTATCCAGACA+GGG | + | chr2.3:17996702-17996721 | MS.gene069371:intron | 35.0% |
!! | AGAACAAACCTCTTTTGGAA+TGG | - | chr2.3:17994402-17994421 | None:intergenic | 35.0% |
!! | CTTGATAATGCAGAGAAATG+CGG | - | chr2.3:17996107-17996126 | None:intergenic | 35.0% |
!!! | ATAGATGGTGGAGATTTTGA+TGG | + | chr2.3:17996277-17996296 | MS.gene069371:CDS | 35.0% |
!!! | CTCAAGGACTCAACATTTTT+TGG | + | chr2.3:17994525-17994544 | MS.gene069371:CDS | 35.0% |
!!! | GGTTGTGTTGTTTTCAATGT+AGG | + | chr2.3:17996803-17996822 | MS.gene069371:intron | 35.0% |
!!! | GTTTTGTTTATCTCTACCAG+AGG | + | chr2.3:17995425-17995444 | MS.gene069371:intron | 35.0% |
AAAGATTGGTGCATCTCTCA+AGG | + | chr2.3:17994509-17994528 | MS.gene069371:CDS | 40.0% | |
AATCCTTCAGCAGTGAATCT+AGG | - | chr2.3:17995838-17995857 | None:intergenic | 40.0% | |
AATCTAGGTTCCTTAGCAGT+TGG | - | chr2.3:17995823-17995842 | None:intergenic | 40.0% | |
ACAATGATCAAGCGCTTTGA+AGG | - | chr2.3:17995943-17995962 | None:intergenic | 40.0% | |
AGAAGATACCATGAGGAAAC+TGG | + | chr2.3:17996358-17996377 | MS.gene069371:CDS | 40.0% | |
AGAATTCAGGTGAGTTTGTC+AGG | + | chr2.3:17994768-17994787 | MS.gene069371:intron | 40.0% | |
AGGGAATTGCGACAAAAAGT+CGG | + | chr2.3:17995445-17995464 | MS.gene069371:CDS | 40.0% | |
AGTTCATCCATGATAGATGG+TGG | + | chr2.3:17996265-17996284 | MS.gene069371:CDS | 40.0% | |
ATATACATATGCATGCGCAC+GGG | - | chr2.3:17995122-17995141 | None:intergenic | 40.0% | |
ATGTGATTCCAGTTTCCTCA+TGG | - | chr2.3:17996369-17996388 | None:intergenic | 40.0% | |
CCGGTTTAATTGACCTACTT+TGG | - | chr2.3:17995359-17995378 | None:intergenic | 40.0% | |
CGCATTTCTCTGCATTATCA+AGG | + | chr2.3:17996105-17996124 | MS.gene069371:intron | 40.0% | |
CTGATGGCAAGAAAACATTG+AGG | + | chr2.3:17995524-17995543 | MS.gene069371:CDS | 40.0% | |
GAAAATGGGTCAGTTATTCC+GGG | - | chr2.3:17995173-17995192 | None:intergenic | 40.0% | |
GAAGGATTTGAGCTTAGTGT+TGG | + | chr2.3:17995850-17995869 | MS.gene069371:CDS | 40.0% | |
GGCAAGAAAACATTGAGGAA+AGG | + | chr2.3:17995529-17995548 | MS.gene069371:CDS | 40.0% | |
GTTCCATAGAAGATACCATG+AGG | + | chr2.3:17996351-17996370 | MS.gene069371:CDS | 40.0% | |
TAAGTTGCTTATCCAGACAG+GGG | + | chr2.3:17996703-17996722 | MS.gene069371:intron | 40.0% | |
TGTTTACTTGCCAACTGCTA+AGG | + | chr2.3:17995810-17995829 | MS.gene069371:CDS | 40.0% | |
! | CAATGATCAAGCGCTTTGAA+GGG | - | chr2.3:17995942-17995961 | None:intergenic | 40.0% |
! | CTCAATGTTTTCTTGCCATC+AGG | - | chr2.3:17995526-17995545 | None:intergenic | 40.0% |
! | GCATGTAATTATGGCTTGCA+GGG | + | chr2.3:17995627-17995646 | MS.gene069371:CDS | 40.0% |
! | GTTAAGTTGCTTATCCAGAC+AGG | + | chr2.3:17996701-17996720 | MS.gene069371:intron | 40.0% |
! | TCAAAGCGCTTGATCATTGT+CGG | + | chr2.3:17995943-17995962 | MS.gene069371:CDS | 40.0% |
! | TGGAAGCATAGCTCAGAAAA+TGG | + | chr2.3:17994937-17994956 | MS.gene069371:intron | 40.0% |
! | TTCCAGAAGTACATCACCAA+AGG | + | chr2.3:17996472-17996491 | MS.gene069371:CDS | 40.0% |
! | TTTGGAATGGAGAAAGAAGC+AGG | - | chr2.3:17994389-17994408 | None:intergenic | 40.0% |
!! | AAAGGAAGTGTTGTGATCAC+TGG | + | chr2.3:17995547-17995566 | MS.gene069371:CDS | 40.0% |
!! | AGGGAATAGAGTTCTGAACA+AGG | - | chr2.3:17996449-17996468 | None:intergenic | 40.0% |
!! | GGGAATAGAGTTCTGAACAA+GGG | - | chr2.3:17996448-17996467 | None:intergenic | 40.0% |
!! | TAGTGAGAAGCTTGTTGGTT+TGG | + | chr2.3:17996953-17996972 | MS.gene069371:CDS | 40.0% |
!! | TGATGTACTTCTGGAATGGA+GGG | - | chr2.3:17996468-17996487 | None:intergenic | 40.0% |
!! | TTGGTGATGTACTTCTGGAA+TGG | - | chr2.3:17996472-17996491 | None:intergenic | 40.0% |
!!! | GGAGTACCCTTTATTTTTCG+TGG | + | chr2.3:17995386-17995405 | MS.gene069371:intron | 40.0% |
AAAATCTGCTGGCATGGCTA+AGG | + | chr2.3:17995675-17995694 | MS.gene069371:CDS | 45.0% | |
AATCTGGTGTTTACTGGAGC+TGG | + | chr2.3:17996850-17996869 | MS.gene069371:CDS | 45.0% | |
ACATTTGCTTCCCTTTACCC+TGG | + | chr2.3:17996385-17996404 | MS.gene069371:CDS | 45.0% | |
ACGCACTTGTAAGACTGTTC+TGG | + | chr2.3:17996584-17996603 | MS.gene069371:intron | 45.0% | |
ACTGGTGCTTCATCTGGATT+AGG | + | chr2.3:17995565-17995584 | MS.gene069371:CDS | 45.0% | |
AGAGGCAAGTGATGTAGAGA+AGG | + | chr2.3:17996911-17996930 | MS.gene069371:CDS | 45.0% | |
AGGTGAGTTTGTCAGGATCA+CGG | + | chr2.3:17994775-17994794 | MS.gene069371:intron | 45.0% | |
ATTTCAGCTCGTCTGCATTG+AGG | + | chr2.3:17994577-17994596 | MS.gene069371:CDS | 45.0% | |
CATCAATCGCAGTCACATTG+TGG | - | chr2.3:17996074-17996093 | None:intergenic | 45.0% | |
CTTTGGCTGAGACAGGAAAA+TGG | + | chr2.3:17995605-17995624 | MS.gene069371:CDS | 45.0% | |
GAACCTAGATTCACTGCTGA+AGG | + | chr2.3:17995832-17995851 | MS.gene069371:CDS | 45.0% | |
GAATGGAGAAAGAAGCAGGA+AGG | - | chr2.3:17994385-17994404 | None:intergenic | 45.0% | |
GACTTTCCGGTGGTTTGAAT+GGG | + | chr2.3:17996236-17996255 | MS.gene069371:CDS | 45.0% | |
GAGGTTAGTGAGAAGCTTGT+TGG | + | chr2.3:17996948-17996967 | MS.gene069371:CDS | 45.0% | |
GCCAATTCGTGGATAACTTC+AGG | + | chr2.3:17995746-17995765 | MS.gene069371:CDS | 45.0% | |
GCCTGAAGTTATCCACGAAT+TGG | - | chr2.3:17995750-17995769 | None:intergenic | 45.0% | |
GGTAACACAAACACATTGGC+TGG | + | chr2.3:17996175-17996194 | MS.gene069371:intron | 45.0% | |
GTAGGTCAATTAAACCGGGA+CGG | + | chr2.3:17995361-17995380 | MS.gene069371:intron | 45.0% | |
GTGTTGGGACAAACCATCTT+GGG | + | chr2.3:17995866-17995885 | MS.gene069371:CDS | 45.0% | |
GTTAAGCCCATTCAAACCAC+CGG | - | chr2.3:17996245-17996264 | None:intergenic | 45.0% | |
GTTACCAAATCCTCACCTGA+TGG | + | chr2.3:17995508-17995527 | MS.gene069371:CDS | 45.0% | |
TACGTCTCAGAAGATGAAGC+AGG | + | chr2.3:17996496-17996515 | MS.gene069371:CDS | 45.0% | |
TGAGAACCAGCTATCTCAAG+AGG | + | chr2.3:17996893-17996912 | MS.gene069371:CDS | 45.0% | |
TTAGTATGGCTGTCTGTCAG+TGG | + | chr2.3:17995987-17996006 | MS.gene069371:intron | 45.0% | |
! | AGTGTTGGGACAAACCATCT+TGG | + | chr2.3:17995865-17995884 | MS.gene069371:CDS | 45.0% |
! | CTTTTTGTCGCAATTCCCTC+TGG | - | chr2.3:17995444-17995463 | None:intergenic | 45.0% |
! | GGCATGTAATTATGGCTTGC+AGG | + | chr2.3:17995626-17995645 | MS.gene069371:CDS | 45.0% |
! | TATTGCTATTAGCCCCTGTC+TGG | - | chr2.3:17996718-17996737 | None:intergenic | 45.0% |
! | TGCCACAACAGGCTTGTTTA+GGG | + | chr2.3:17996414-17996433 | MS.gene069371:CDS | 45.0% |
! | TGTTTTCTTGCCATCAGGTG+AGG | - | chr2.3:17995521-17995540 | None:intergenic | 45.0% |
! | TTGCCACAACAGGCTTGTTT+AGG | + | chr2.3:17996413-17996432 | MS.gene069371:CDS | 45.0% |
! | TTTGCTGTCCTTGTATGCCT+TGG | - | chr2.3:17996305-17996324 | None:intergenic | 45.0% |
!! | AAGTCACCAAGGTTAGCCTT+TGG | - | chr2.3:17996211-17996230 | None:intergenic | 45.0% |
!! | ACAAAAAGTCGGTGCTGTGA+GGG | + | chr2.3:17995456-17995475 | MS.gene069371:CDS | 45.0% |
!! | AGCCTTTGGTGATGTACTTC+TGG | - | chr2.3:17996477-17996496 | None:intergenic | 45.0% |
!! | ATCATTGTCGGCTCAATCAC+AGG | + | chr2.3:17995955-17995974 | MS.gene069371:CDS | 45.0% |
!! | ATCTTCTGAGACGTAGCCTT+TGG | - | chr2.3:17996491-17996510 | None:intergenic | 45.0% |
!! | GTGATGTACTTCTGGAATGG+AGG | - | chr2.3:17996469-17996488 | None:intergenic | 45.0% |
!!! | TGGAGATTTTGATGGTGCCA+AGG | + | chr2.3:17996285-17996304 | MS.gene069371:CDS | 45.0% |
AAAGTCCCCTCAAGTCACCA+AGG | - | chr2.3:17996222-17996241 | None:intergenic | 50.0% | |
AAGGGTAGTCAGATTTGCCC+AGG | - | chr2.3:17995924-17995943 | None:intergenic | 50.0% | |
AGCTGCAAAATCTGCTGGCA+TGG | + | chr2.3:17995669-17995688 | MS.gene069371:CDS | 50.0% | |
ATGGGTCAGTTATTCCGGGA+CGG | - | chr2.3:17995169-17995188 | None:intergenic | 50.0% | |
ATGTTATACTCCCTCCGTCC+CGG | + | chr2.3:17995152-17995171 | MS.gene069371:intron | 50.0% | |
ATTAGGCCTAGCCACTGCTA+AGG | + | chr2.3:17995582-17995601 | MS.gene069371:CDS | 50.0% | |
CACTTGCCTCTTGAGATAGC+TGG | - | chr2.3:17996902-17996921 | None:intergenic | 50.0% | |
CTCCCTAAACAAGCCTGTTG+TGG | - | chr2.3:17996419-17996438 | None:intergenic | 50.0% | |
CTGTTGTGGCAATGCAACCA+GGG | - | chr2.3:17996405-17996424 | None:intergenic | 50.0% | |
CTTGCCATCAGGTGAGGATT+TGG | - | chr2.3:17995515-17995534 | None:intergenic | 50.0% | |
GCAAGAGCTGCAAAATCTGC+TGG | + | chr2.3:17995664-17995683 | MS.gene069371:CDS | 50.0% | |
GCTATCAGGTCGCAATGTCA+AGG | + | chr2.3:17996030-17996049 | MS.gene069371:intron | 50.0% | |
GGACTTTCCGGTGGTTTGAA+TGG | + | chr2.3:17996235-17996254 | MS.gene069371:CDS | 50.0% | |
GGCAATGCAACCAGGGTAAA+GGG | - | chr2.3:17996398-17996417 | None:intergenic | 50.0% | |
GTCAATTAAACCGGGACGGA+GGG | + | chr2.3:17995365-17995384 | MS.gene069371:intron | 50.0% | |
GTGATCACTGGTGCTTCATC+TGG | + | chr2.3:17995559-17995578 | MS.gene069371:CDS | 50.0% | |
TGATGTAGAGAAGGCTCGCA+AGG | + | chr2.3:17996920-17996939 | MS.gene069371:CDS | 50.0% | |
TGGCAATGCAACCAGGGTAA+AGG | - | chr2.3:17996399-17996418 | None:intergenic | 50.0% | |
TTGCAGCTCTTGCAGCTTTG+AGG | - | chr2.3:17995657-17995676 | None:intergenic | 50.0% | |
! | AGCAGGAAAGAGACTTGCTC+AGG | + | chr2.3:17996513-17996532 | MS.gene069371:CDS | 50.0% |
! | AGGCTAACCTTGGTGACTTG+AGG | + | chr2.3:17996212-17996231 | MS.gene069371:CDS | 50.0% |
! | CAGGCGATCTGAAATGCCAT+TGG | + | chr2.3:17995765-17995784 | MS.gene069371:CDS | 50.0% |
! | GCTAACCTTGGTGACTTGAG+GGG | + | chr2.3:17996214-17996233 | MS.gene069371:CDS | 50.0% |
! | GGATTTGGTAACTGCTGGAG+TGG | - | chr2.3:17995500-17995519 | None:intergenic | 50.0% |
! | GGCTAACCTTGGTGACTTGA+GGG | + | chr2.3:17996213-17996232 | MS.gene069371:CDS | 50.0% |
! | GGTGAGGATTTGGTAACTGC+TGG | - | chr2.3:17995505-17995524 | None:intergenic | 50.0% |
! | TCTTTCGCGCCTTTTGCTTG+AGG | + | chr2.3:17995897-17995916 | MS.gene069371:CDS | 50.0% |
! | TGATGGTGCCAAGGCATACA+AGG | + | chr2.3:17996294-17996313 | MS.gene069371:CDS | 50.0% |
!! | GACAAAAAGTCGGTGCTGTG+AGG | + | chr2.3:17995455-17995474 | MS.gene069371:CDS | 50.0% |
!! | TCACCAAGGTTAGCCTTTGG+CGG | - | chr2.3:17996208-17996227 | None:intergenic | 50.0% |
AGAGAAGGCTCGCAAGGTGT+GGG | + | chr2.3:17996926-17996945 | MS.gene069371:CDS | 55.0% | |
CCAAAGCCTTAGCAGTGGCT+AGG | - | chr2.3:17995591-17995610 | None:intergenic | 55.0% | |
CCTAGCCACTGCTAAGGCTT+TGG | + | chr2.3:17995588-17995607 | MS.gene069371:CDS | 55.0% | |
CCTGGTTGCATTGCCACAAC+AGG | + | chr2.3:17996403-17996422 | MS.gene069371:CDS | 55.0% | |
CCTGTTGTGGCAATGCAACC+AGG | - | chr2.3:17996406-17996425 | None:intergenic | 55.0% | |
CTCAGCCAAAGCCTTAGCAG+TGG | - | chr2.3:17995596-17995615 | None:intergenic | 55.0% | |
CTCGTCTGCATTGAGGTGCA+AGG | + | chr2.3:17994584-17994603 | MS.gene069371:CDS | 55.0% | |
GAACGCTGTCGAGAGAGGAA+AGG | - | chr2.3:17995726-17995745 | None:intergenic | 55.0% | |
GGCTGGAAATGTACCGCCAA+AGG | + | chr2.3:17996192-17996211 | MS.gene069371:CDS | 55.0% | |
GGTCAATTAAACCGGGACGG+AGG | + | chr2.3:17995364-17995383 | MS.gene069371:intron | 55.0% | |
GGTGACTTGAGGGGACTTTC+CGG | + | chr2.3:17996223-17996242 | MS.gene069371:CDS | 55.0% | |
GTACCGCCAAAGGCTAACCT+TGG | + | chr2.3:17996202-17996221 | MS.gene069371:CDS | 55.0% | |
GTCAGTTATTCCGGGACGGA+GGG | - | chr2.3:17995165-17995184 | None:intergenic | 55.0% | |
TAGAGAAGGCTCGCAAGGTG+TGG | + | chr2.3:17996925-17996944 | MS.gene069371:CDS | 55.0% | |
TGCCCAGGTCCTCAAGCAAA+AGG | - | chr2.3:17995909-17995928 | None:intergenic | 55.0% | |
! | CGCCTTTTGCTTGAGGACCT+GGG | + | chr2.3:17995904-17995923 | MS.gene069371:CDS | 55.0% |
! | GCTAAGGCTTTGGCTGAGAC+AGG | + | chr2.3:17995598-17995617 | MS.gene069371:CDS | 55.0% |
CGACAGCGTTCGCCAATTCG+TGG | + | chr2.3:17995735-17995754 | MS.gene069371:CDS | 60.0% | |
GACTTGAGGGGACTTTCCGG+TGG | + | chr2.3:17996226-17996245 | MS.gene069371:CDS | 60.0% | |
GGTCAGTTATTCCGGGACGG+AGG | - | chr2.3:17995166-17995185 | None:intergenic | 60.0% | |
TGCTGTGAGGGCAGAGACAG+CGG | + | chr2.3:17995468-17995487 | MS.gene069371:CDS | 60.0% | |
TTGGCGAACGCTGTCGAGAG+AGG | - | chr2.3:17995731-17995750 | None:intergenic | 60.0% | |
! | GCGCCTTTTGCTTGAGGACC+TGG | + | chr2.3:17995903-17995922 | MS.gene069371:CDS | 60.0% |
!! | AAAGGGTACTCCCTCCGTCC+CGG | - | chr2.3:17995378-17995397 | None:intergenic | 60.0% |
GAAGGCTCGCAAGGTGTGGG+AGG | + | chr2.3:17996929-17996948 | MS.gene069371:CDS | 65.0% | |
TGCATGCGCACGGGTCGCGC+TGG | - | chr2.3:17995113-17995132 | None:intergenic | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr2.3 | gene | 17994359 | 17996980 | 17994359 | ID=MS.gene069371 |
chr2.3 | mRNA | 17994359 | 17996980 | 17994359 | ID=MS.gene069371.t1;Parent=MS.gene069371 |
chr2.3 | exon | 17994359 | 17994412 | 17994359 | ID=MS.gene069371.t1.exon1;Parent=MS.gene069371.t1 |
chr2.3 | CDS | 17994359 | 17994412 | 17994359 | ID=cds.MS.gene069371.t1;Parent=MS.gene069371.t1 |
chr2.3 | exon | 17994507 | 17994605 | 17994507 | ID=MS.gene069371.t1.exon2;Parent=MS.gene069371.t1 |
chr2.3 | CDS | 17994507 | 17994605 | 17994507 | ID=cds.MS.gene069371.t1;Parent=MS.gene069371.t1 |
chr2.3 | exon | 17995445 | 17995976 | 17995445 | ID=MS.gene069371.t1.exon3;Parent=MS.gene069371.t1 |
chr2.3 | CDS | 17995445 | 17995976 | 17995445 | ID=cds.MS.gene069371.t1;Parent=MS.gene069371.t1 |
chr2.3 | exon | 17996176 | 17996534 | 17996176 | ID=MS.gene069371.t1.exon4;Parent=MS.gene069371.t1 |
chr2.3 | CDS | 17996176 | 17996534 | 17996176 | ID=cds.MS.gene069371.t1;Parent=MS.gene069371.t1 |
chr2.3 | exon | 17996825 | 17996980 | 17996825 | ID=MS.gene069371.t1.exon5;Parent=MS.gene069371.t1 |
chr2.3 | CDS | 17996825 | 17996980 | 17996825 | ID=cds.MS.gene069371.t1;Parent=MS.gene069371.t1 |
Gene Sequence |
Protein sequence |