Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene032434.t1 | RHN40726.1 | 71.2 | 396 | 97 | 7 | 1 | 387 | 1 | 388 | 6.80E-158 | 567 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene032434.t1 | Q9LW83 | 29.3 | 348 | 206 | 12 | 72 | 382 | 74 | 418 | 1.8e-26 | 121.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene032434.t1 | A0A396GHR2 | 71.2 | 396 | 97 | 7 | 1 | 387 | 1 | 388 | 4.9e-158 | 567.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene032434 | MS.gene002329 | PPI |
| MS.gene025524 | MS.gene032434 | PPI |
| MS.gene28684 | MS.gene032434 | PPI |
| MS.gene026128 | MS.gene032434 | PPI |
| MS.gene01719 | MS.gene032434 | PPI |
| MS.gene84493 | MS.gene032434 | PPI |
| MS.gene84491 | MS.gene032434 | PPI |
| MS.gene48738 | MS.gene032434 | PPI |
| MS.gene02278 | MS.gene032434 | PPI |
| MS.gene002327 | MS.gene032434 | PPI |
| MS.gene01306 | MS.gene032434 | PPI |
| MS.gene84487 | MS.gene032434 | PPI |
| MS.gene28678 | MS.gene032434 | PPI |
| MS.gene01309 | MS.gene032434 | PPI |
| MS.gene01721 | MS.gene032434 | PPI |
| MS.gene01307 | MS.gene032434 | PPI |
| MS.gene002328 | MS.gene032434 | PPI |
| MS.gene02279 | MS.gene032434 | PPI |
| MS.gene75227 | MS.gene032434 | PPI |
| MS.gene065324 | MS.gene032434 | PPI |
| MS.gene032434 | MS.gene01720 | PPI |
| MS.gene33837 | MS.gene032434 | PPI |
| MS.gene88046 | MS.gene032434 | PPI |
| MS.gene052579 | MS.gene032434 | PPI |
| MS.gene067615 | MS.gene032434 | PPI |
| MS.gene32226 | MS.gene032434 | PPI |
| MS.gene02280 | MS.gene032434 | PPI |
| MS.gene99531 | MS.gene032434 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene032434.t1 | MTR_8g052420 | 71.429 | 392 | 101 | 5 | 1 | 388 | 1 | 385 | 0.0 | 556 |
| MS.gene032434.t1 | MTR_8g052190 | 68.622 | 392 | 106 | 5 | 1 | 382 | 2 | 386 | 0.0 | 550 |
| MS.gene032434.t1 | MTR_8g052190 | 68.622 | 392 | 106 | 5 | 1 | 382 | 2 | 386 | 0.0 | 550 |
| MS.gene032434.t1 | MTR_8g052080 | 69.059 | 404 | 108 | 8 | 1 | 389 | 1 | 402 | 0.0 | 548 |
| MS.gene032434.t1 | MTR_8g052050 | 68.564 | 404 | 109 | 8 | 1 | 389 | 1 | 401 | 0.0 | 546 |
| MS.gene032434.t1 | MTR_8g052513 | 69.095 | 398 | 95 | 8 | 1 | 388 | 1 | 380 | 0.0 | 530 |
| MS.gene032434.t1 | MTR_8g052160 | 69.289 | 394 | 81 | 6 | 1 | 388 | 1 | 360 | 0.0 | 528 |
| MS.gene032434.t1 | MTR_8g052600 | 68.844 | 398 | 96 | 8 | 1 | 388 | 1 | 380 | 0.0 | 523 |
| MS.gene032434.t1 | MTR_8g052200 | 66.667 | 396 | 107 | 5 | 1 | 388 | 2 | 380 | 0.0 | 522 |
| MS.gene032434.t1 | MTR_8g052520 | 65.578 | 398 | 111 | 5 | 1 | 388 | 1 | 382 | 0.0 | 511 |
| MS.gene032434.t1 | MTR_8g052120 | 66.667 | 390 | 107 | 4 | 1 | 388 | 2 | 370 | 6.79e-179 | 517 |
| MS.gene032434.t1 | MTR_8g051600 | 66.837 | 392 | 111 | 7 | 1 | 381 | 1 | 384 | 6.06e-178 | 515 |
| MS.gene032434.t1 | MTR_8g052320 | 69.624 | 372 | 86 | 7 | 1 | 362 | 1 | 355 | 2.39e-174 | 502 |
| MS.gene032434.t1 | MTR_8g052320 | 64.041 | 292 | 79 | 5 | 41 | 321 | 354 | 630 | 7.14e-118 | 357 |
| MS.gene032434.t1 | MTR_1g081665 | 68.852 | 366 | 97 | 5 | 27 | 388 | 47 | 399 | 2.23e-170 | 493 |
| MS.gene032434.t1 | MTR_8g052060 | 64.286 | 392 | 104 | 5 | 1 | 388 | 1 | 360 | 2.68e-168 | 489 |
| MS.gene032434.t1 | MTR_8g052480 | 66.972 | 327 | 84 | 4 | 1 | 319 | 2 | 312 | 4.88e-152 | 432 |
| MS.gene032434.t1 | MTR_8g052300 | 66.972 | 327 | 84 | 4 | 1 | 319 | 2 | 312 | 4.88e-152 | 432 |
| MS.gene032434.t1 | MTR_8g051540 | 46.482 | 398 | 176 | 14 | 7 | 381 | 8 | 391 | 3.69e-98 | 310 |
| MS.gene032434.t1 | MTR_8g442270 | 47.696 | 369 | 165 | 11 | 7 | 358 | 9 | 366 | 1.54e-97 | 308 |
| MS.gene032434.t1 | MTR_8g442290 | 44.784 | 393 | 184 | 13 | 6 | 379 | 10 | 388 | 1.92e-97 | 301 |
| MS.gene032434.t1 | MTR_8g442370 | 45.137 | 401 | 181 | 14 | 9 | 391 | 10 | 389 | 8.89e-95 | 301 |
| MS.gene032434.t1 | MTR_6g054070 | 63.830 | 188 | 60 | 2 | 119 | 304 | 1 | 182 | 9.75e-78 | 238 |
| MS.gene032434.t1 | MTR_8g051640 | 40.852 | 399 | 158 | 15 | 7 | 379 | 9 | 355 | 5.93e-77 | 253 |
| MS.gene032434.t1 | MTR_8g442340 | 39.594 | 394 | 146 | 13 | 7 | 379 | 8 | 330 | 5.27e-73 | 242 |
| MS.gene032434.t1 | MTR_8g442310 | 43.956 | 364 | 171 | 12 | 34 | 381 | 1 | 347 | 5.48e-73 | 242 |
| MS.gene032434.t1 | MTR_8g052510 | 63.068 | 176 | 46 | 2 | 1 | 174 | 1 | 159 | 2.78e-69 | 216 |
| MS.gene032434.t1 | MTR_8g052270 | 63.068 | 176 | 46 | 2 | 1 | 174 | 1 | 159 | 2.78e-69 | 216 |
| MS.gene032434.t1 | MTR_8g052370 | 56.557 | 122 | 28 | 1 | 20 | 141 | 7 | 103 | 1.40e-36 | 129 |
| MS.gene032434.t1 | MTR_2g011150 | 27.108 | 332 | 191 | 10 | 72 | 360 | 78 | 401 | 4.79e-25 | 107 |
| MS.gene032434.t1 | MTR_8g465570 | 25.974 | 385 | 234 | 11 | 1 | 358 | 1 | 361 | 1.40e-22 | 100 |
| MS.gene032434.t1 | MTR_4g091860 | 28.824 | 340 | 181 | 15 | 70 | 356 | 71 | 402 | 3.33e-21 | 96.3 |
| MS.gene032434.t1 | MTR_4g091780 | 28.676 | 272 | 168 | 8 | 8 | 260 | 10 | 274 | 8.74e-21 | 95.1 |
| MS.gene032434.t1 | MTR_8g052110 | 60.294 | 68 | 26 | 1 | 187 | 254 | 23 | 89 | 2.23e-20 | 85.5 |
| MS.gene032434.t1 | MTR_8g465410 | 27.805 | 410 | 205 | 17 | 2 | 345 | 1 | 385 | 2.78e-20 | 93.6 |
| MS.gene032434.t1 | MTR_8g465150 | 30.000 | 200 | 120 | 5 | 72 | 259 | 82 | 273 | 4.79e-19 | 89.7 |
| MS.gene032434.t1 | MTR_4g091670 | 33.659 | 205 | 120 | 7 | 70 | 262 | 74 | 274 | 9.28e-19 | 88.6 |
| MS.gene032434.t1 | MTR_4g091670 | 33.659 | 205 | 120 | 7 | 70 | 262 | 74 | 274 | 1.20e-18 | 88.6 |
| MS.gene032434.t1 | MTR_4g091670 | 33.659 | 205 | 120 | 7 | 70 | 262 | 74 | 274 | 1.25e-18 | 88.2 |
| MS.gene032434.t1 | MTR_2g011170 | 25.743 | 404 | 237 | 17 | 11 | 358 | 3 | 399 | 2.29e-18 | 87.4 |
| MS.gene032434.t1 | MTR_2g011170 | 25.743 | 404 | 237 | 17 | 11 | 358 | 3 | 399 | 2.32e-18 | 87.4 |
| MS.gene032434.t1 | MTR_2g011340 | 25.000 | 392 | 200 | 19 | 72 | 390 | 79 | 449 | 3.88e-18 | 87.0 |
| MS.gene032434.t1 | MTR_2g089440 | 27.481 | 262 | 179 | 7 | 10 | 262 | 14 | 273 | 5.79e-18 | 86.3 |
| MS.gene032434.t1 | MTR_4g091680 | 24.534 | 322 | 202 | 10 | 70 | 356 | 96 | 411 | 7.25e-18 | 85.9 |
| MS.gene032434.t1 | MTR_8g465580 | 26.429 | 420 | 218 | 17 | 6 | 358 | 5 | 400 | 9.21e-18 | 85.5 |
| MS.gene032434.t1 | MTR_4g091840 | 29.730 | 222 | 128 | 7 | 8 | 209 | 19 | 232 | 1.14e-17 | 85.5 |
| MS.gene032434.t1 | MTR_8g465470 | 32.353 | 204 | 105 | 7 | 1 | 187 | 32 | 219 | 1.58e-17 | 85.1 |
| MS.gene032434.t1 | MTR_4g091690 | 33.333 | 201 | 108 | 6 | 4 | 189 | 27 | 216 | 2.71e-17 | 84.3 |
| MS.gene032434.t1 | MTR_4g091800 | 28.440 | 218 | 136 | 5 | 8 | 209 | 19 | 232 | 2.77e-17 | 84.0 |
| MS.gene032434.t1 | MTR_4g091820 | 28.440 | 218 | 136 | 5 | 8 | 209 | 19 | 232 | 3.95e-17 | 84.0 |
| MS.gene032434.t1 | MTR_7g056617 | 34.839 | 155 | 91 | 5 | 70 | 220 | 79 | 227 | 5.10e-17 | 83.2 |
| MS.gene032434.t1 | MTR_4g081750 | 28.440 | 327 | 176 | 15 | 72 | 354 | 75 | 387 | 6.13e-17 | 83.6 |
| MS.gene032434.t1 | MTR_2g011180 | 30.516 | 213 | 136 | 8 | 61 | 262 | 63 | 274 | 9.46e-17 | 82.8 |
| MS.gene032434.t1 | MTR_4g081650 | 33.889 | 180 | 108 | 7 | 72 | 247 | 75 | 247 | 1.17e-16 | 82.4 |
| MS.gene032434.t1 | MTR_4g081665 | 28.221 | 326 | 181 | 14 | 72 | 355 | 74 | 388 | 1.21e-16 | 82.4 |
| MS.gene032434.t1 | MTR_2g011180 | 30.516 | 213 | 136 | 8 | 61 | 262 | 63 | 274 | 1.34e-16 | 82.4 |
| MS.gene032434.t1 | MTR_2g089360 | 29.487 | 234 | 143 | 7 | 34 | 262 | 54 | 270 | 1.51e-16 | 82.0 |
| MS.gene032434.t1 | MTR_7g056680 | 35.032 | 157 | 92 | 5 | 70 | 222 | 73 | 223 | 2.37e-16 | 81.3 |
| MS.gene032434.t1 | MTR_7g056680 | 35.032 | 157 | 92 | 5 | 70 | 222 | 73 | 223 | 2.56e-16 | 81.3 |
| MS.gene032434.t1 | MTR_7g056680 | 35.032 | 157 | 92 | 5 | 70 | 222 | 73 | 223 | 2.60e-16 | 81.3 |
| MS.gene032434.t1 | MTR_2g081470 | 25.245 | 408 | 242 | 15 | 11 | 366 | 6 | 402 | 2.75e-16 | 81.3 |
| MS.gene032434.t1 | MTR_7g056680 | 35.032 | 157 | 92 | 5 | 70 | 222 | 73 | 223 | 2.78e-16 | 81.3 |
| MS.gene032434.t1 | MTR_7g056667 | 25.071 | 351 | 184 | 13 | 70 | 361 | 71 | 401 | 3.77e-16 | 80.9 |
| MS.gene032434.t1 | MTR_4g098890 | 36.552 | 145 | 82 | 5 | 70 | 209 | 650 | 789 | 4.28e-16 | 80.9 |
| MS.gene032434.t1 | MTR_8g061110 | 27.703 | 296 | 171 | 14 | 107 | 372 | 7 | 289 | 4.52e-16 | 80.5 |
| MS.gene032434.t1 | MTR_6g012810 | 32.584 | 178 | 104 | 3 | 21 | 186 | 120 | 293 | 5.69e-16 | 80.1 |
| MS.gene032434.t1 | MTR_2g011160 | 37.097 | 124 | 71 | 3 | 72 | 190 | 75 | 196 | 6.01e-16 | 80.1 |
| MS.gene032434.t1 | MTR_6g012810 | 32.584 | 178 | 104 | 3 | 21 | 186 | 120 | 293 | 7.95e-16 | 79.7 |
| MS.gene032434.t1 | MTR_2g011160 | 37.097 | 124 | 71 | 3 | 72 | 190 | 75 | 196 | 9.35e-16 | 79.7 |
| MS.gene032434.t1 | MTR_4g081675 | 30.078 | 256 | 153 | 9 | 10 | 246 | 3 | 251 | 1.34e-15 | 79.0 |
| MS.gene032434.t1 | MTR_4g091760 | 26.800 | 250 | 160 | 5 | 30 | 260 | 23 | 268 | 1.63e-15 | 79.0 |
| MS.gene032434.t1 | MTR_7g056647 | 25.000 | 348 | 206 | 13 | 70 | 370 | 79 | 418 | 2.83e-15 | 78.2 |
| MS.gene032434.t1 | MTR_7g056663 | 33.803 | 142 | 85 | 4 | 72 | 209 | 75 | 211 | 3.23e-15 | 77.8 |
| MS.gene032434.t1 | MTR_5g055070 | 31.395 | 172 | 103 | 4 | 27 | 185 | 15 | 184 | 3.52e-15 | 77.8 |
| MS.gene032434.t1 | MTR_4g081685 | 30.350 | 257 | 152 | 10 | 10 | 246 | 3 | 252 | 4.04e-15 | 77.8 |
| MS.gene032434.t1 | MTR_5g055070 | 31.395 | 172 | 103 | 4 | 27 | 185 | 15 | 184 | 4.12e-15 | 77.4 |
| MS.gene032434.t1 | MTR_5g055070 | 31.395 | 172 | 103 | 4 | 27 | 185 | 15 | 184 | 4.56e-15 | 77.4 |
| MS.gene032434.t1 | MTR_8g465990 | 30.534 | 262 | 150 | 12 | 1 | 245 | 5 | 251 | 4.98e-15 | 77.0 |
| MS.gene032434.t1 | MTR_8g465990 | 30.534 | 262 | 150 | 12 | 1 | 245 | 5 | 251 | 6.45e-15 | 77.0 |
| MS.gene032434.t1 | MTR_4g091850 | 28.500 | 200 | 130 | 5 | 70 | 260 | 88 | 283 | 6.64e-15 | 77.0 |
| MS.gene032434.t1 | MTR_8g465990 | 30.534 | 262 | 150 | 12 | 1 | 245 | 5 | 251 | 6.66e-15 | 77.0 |
| MS.gene032434.t1 | MTR_4g081730 | 31.892 | 185 | 112 | 6 | 72 | 247 | 73 | 252 | 1.26e-14 | 75.9 |
| MS.gene032434.t1 | MTR_0280s0040 | 28.148 | 270 | 177 | 9 | 4 | 262 | 7 | 270 | 1.27e-14 | 76.3 |
| MS.gene032434.t1 | MTR_5g067250 | 23.573 | 403 | 234 | 13 | 27 | 368 | 25 | 414 | 1.49e-14 | 75.9 |
| MS.gene032434.t1 | MTR_3g019390 | 25.895 | 363 | 214 | 15 | 33 | 345 | 28 | 385 | 1.51e-14 | 75.9 |
| MS.gene032434.t1 | MTR_3g020230 | 25.948 | 343 | 199 | 16 | 70 | 366 | 77 | 410 | 1.61e-14 | 75.9 |
| MS.gene032434.t1 | MTR_3g019390 | 25.895 | 363 | 214 | 15 | 33 | 345 | 28 | 385 | 2.56e-14 | 75.1 |
| MS.gene032434.t1 | MTR_8g465510 | 25.000 | 336 | 203 | 12 | 70 | 358 | 70 | 403 | 3.74e-14 | 74.7 |
| MS.gene032434.t1 | MTR_3g051420 | 33.333 | 159 | 98 | 5 | 31 | 186 | 43 | 196 | 7.60e-14 | 73.6 |
| MS.gene032434.t1 | MTR_8g013560 | 26.562 | 192 | 130 | 4 | 26 | 209 | 24 | 212 | 8.92e-14 | 73.6 |
| MS.gene032434.t1 | MTR_3g019530 | 25.000 | 388 | 233 | 16 | 19 | 358 | 23 | 400 | 1.60e-13 | 72.4 |
| MS.gene032434.t1 | MTR_3g019530 | 25.000 | 388 | 233 | 16 | 19 | 358 | 23 | 400 | 1.69e-13 | 72.4 |
| MS.gene032434.t1 | MTR_8g465160 | 36.691 | 139 | 78 | 3 | 72 | 206 | 83 | 215 | 1.83e-13 | 72.4 |
| MS.gene032434.t1 | MTR_7g056510 | 35.032 | 157 | 92 | 5 | 70 | 222 | 73 | 223 | 1.90e-13 | 72.0 |
| MS.gene032434.t1 | MTR_7g056510 | 35.032 | 157 | 92 | 5 | 70 | 222 | 73 | 223 | 1.97e-13 | 72.4 |
| MS.gene032434.t1 | MTR_7g056640 | 31.210 | 157 | 98 | 5 | 70 | 222 | 101 | 251 | 2.27e-13 | 72.4 |
| MS.gene032434.t1 | MTR_2g011270 | 22.917 | 384 | 210 | 15 | 72 | 386 | 57 | 423 | 2.46e-13 | 72.0 |
| MS.gene032434.t1 | MTR_3g019530 | 25.000 | 388 | 233 | 16 | 19 | 358 | 23 | 400 | 2.56e-13 | 72.0 |
| MS.gene032434.t1 | MTR_5g067290 | 23.125 | 320 | 204 | 10 | 72 | 358 | 80 | 390 | 2.69e-13 | 71.2 |
| MS.gene032434.t1 | MTR_7g056510 | 35.032 | 157 | 92 | 5 | 70 | 222 | 73 | 223 | 2.77e-13 | 72.0 |
| MS.gene032434.t1 | MTR_7g056510 | 35.032 | 157 | 92 | 5 | 70 | 222 | 73 | 223 | 3.01e-13 | 71.6 |
| MS.gene032434.t1 | MTR_3g019530 | 25.000 | 388 | 233 | 16 | 19 | 358 | 23 | 400 | 3.28e-13 | 71.6 |
| MS.gene032434.t1 | MTR_3g019530 | 25.000 | 388 | 233 | 16 | 19 | 358 | 23 | 400 | 3.36e-13 | 71.6 |
| MS.gene032434.t1 | MTR_7g056510 | 35.032 | 157 | 92 | 5 | 70 | 222 | 63 | 213 | 3.71e-13 | 71.6 |
| MS.gene032434.t1 | MTR_4g081640 | 31.953 | 169 | 100 | 5 | 30 | 186 | 23 | 188 | 3.87e-13 | 71.6 |
| MS.gene032434.t1 | MTR_3g019580 | 24.352 | 386 | 238 | 14 | 20 | 358 | 37 | 415 | 3.87e-13 | 71.2 |
| MS.gene032434.t1 | MTR_3g019580 | 25.000 | 388 | 233 | 17 | 20 | 358 | 37 | 415 | 6.02e-13 | 70.9 |
| MS.gene032434.t1 | MTR_3g019580 | 24.352 | 386 | 238 | 14 | 20 | 358 | 37 | 415 | 6.57e-13 | 70.9 |
| MS.gene032434.t1 | MTR_3g019580 | 25.000 | 388 | 233 | 17 | 20 | 358 | 34 | 412 | 7.11e-13 | 70.9 |
| MS.gene032434.t1 | MTR_7g056420 | 28.934 | 197 | 128 | 7 | 70 | 260 | 411 | 601 | 7.33e-13 | 70.9 |
| MS.gene032434.t1 | MTR_7g056430 | 28.934 | 197 | 128 | 7 | 70 | 260 | 411 | 601 | 9.53e-13 | 70.5 |
| MS.gene032434.t1 | MTR_7g056537 | 32.911 | 158 | 93 | 6 | 72 | 222 | 171 | 322 | 1.03e-12 | 69.3 |
| MS.gene032434.t1 | MTR_3g007650 | 30.811 | 185 | 117 | 4 | 72 | 245 | 77 | 261 | 1.47e-12 | 69.7 |
| MS.gene032434.t1 | MTR_4g081655 | 29.293 | 198 | 111 | 7 | 72 | 252 | 109 | 294 | 2.19e-12 | 68.9 |
| MS.gene032434.t1 | MTR_3g019420 | 23.298 | 382 | 236 | 14 | 32 | 361 | 27 | 403 | 2.20e-12 | 69.3 |
| MS.gene032434.t1 | MTR_8g013610 | 25.521 | 192 | 132 | 4 | 26 | 209 | 25 | 213 | 2.35e-12 | 68.9 |
| MS.gene032434.t1 | MTR_8g013600 | 25.521 | 192 | 132 | 4 | 26 | 209 | 24 | 212 | 2.41e-12 | 68.9 |
| MS.gene032434.t1 | MTR_4g081655 | 29.293 | 198 | 111 | 7 | 72 | 252 | 74 | 259 | 2.45e-12 | 68.9 |
| MS.gene032434.t1 | MTR_4g081655 | 29.293 | 198 | 111 | 7 | 72 | 252 | 109 | 294 | 2.63e-12 | 68.9 |
| MS.gene032434.t1 | MTR_2g081500 | 25.393 | 382 | 220 | 17 | 32 | 358 | 27 | 398 | 2.82e-12 | 68.9 |
| MS.gene032434.t1 | MTR_3g019500 | 23.483 | 379 | 234 | 16 | 33 | 358 | 31 | 406 | 3.50e-12 | 68.2 |
| MS.gene032434.t1 | MTR_8g013580 | 25.000 | 192 | 133 | 4 | 26 | 209 | 31 | 219 | 4.24e-12 | 68.2 |
| MS.gene032434.t1 | MTR_7g056623 | 31.944 | 144 | 89 | 4 | 70 | 209 | 53 | 191 | 4.30e-12 | 68.2 |
| MS.gene032434.t1 | MTR_3g019500 | 23.483 | 379 | 234 | 16 | 33 | 358 | 31 | 406 | 4.89e-12 | 67.8 |
| MS.gene032434.t1 | MTR_2g011280 | 21.429 | 462 | 264 | 16 | 9 | 390 | 7 | 449 | 5.00e-12 | 68.2 |
| MS.gene032434.t1 | MTR_3g019500 | 23.483 | 379 | 234 | 16 | 33 | 358 | 31 | 406 | 7.39e-12 | 67.4 |
| MS.gene032434.t1 | MTR_3g007510 | 33.537 | 164 | 97 | 5 | 72 | 224 | 75 | 237 | 1.14e-11 | 67.0 |
| MS.gene032434.t1 | MTR_3g007510 | 33.537 | 164 | 97 | 5 | 72 | 224 | 75 | 237 | 1.17e-11 | 67.0 |
| MS.gene032434.t1 | MTR_3g007510 | 33.537 | 164 | 97 | 5 | 72 | 224 | 75 | 237 | 1.18e-11 | 67.0 |
| MS.gene032434.t1 | MTR_3g020280 | 23.077 | 390 | 241 | 16 | 25 | 358 | 17 | 403 | 1.69e-11 | 66.2 |
| MS.gene032434.t1 | MTR_2g081520 | 26.692 | 266 | 174 | 10 | 11 | 263 | 6 | 263 | 3.90e-11 | 65.1 |
| MS.gene032434.t1 | MTR_2g081520 | 28.283 | 198 | 133 | 6 | 70 | 263 | 71 | 263 | 4.31e-11 | 65.1 |
| MS.gene032434.t1 | MTR_3g007630 | 33.140 | 172 | 87 | 8 | 72 | 224 | 75 | 237 | 4.40e-11 | 65.1 |
| MS.gene032434.t1 | MTR_8g030500 | 34.078 | 179 | 89 | 12 | 72 | 242 | 66 | 223 | 4.66e-11 | 65.1 |
| MS.gene032434.t1 | MTR_0090s0020 | 30.688 | 189 | 104 | 9 | 72 | 247 | 72 | 246 | 5.16e-11 | 64.7 |
| MS.gene032434.t1 | MTR_2g081520 | 26.692 | 266 | 174 | 10 | 11 | 263 | 6 | 263 | 5.67e-11 | 64.7 |
| MS.gene032434.t1 | MTR_2g081520 | 28.283 | 198 | 133 | 6 | 70 | 263 | 71 | 263 | 5.76e-11 | 64.7 |
| MS.gene032434.t1 | MTR_2g081520 | 26.692 | 266 | 174 | 10 | 11 | 263 | 6 | 263 | 6.59e-11 | 64.7 |
| MS.gene032434.t1 | MTR_2g081520 | 28.910 | 211 | 139 | 7 | 57 | 263 | 60 | 263 | 6.69e-11 | 64.7 |
| MS.gene032434.t1 | MTR_0090s0020 | 30.645 | 186 | 108 | 8 | 72 | 247 | 72 | 246 | 6.85e-11 | 64.3 |
| MS.gene032434.t1 | MTR_0090s0020 | 30.688 | 189 | 104 | 9 | 72 | 247 | 72 | 246 | 7.31e-11 | 64.3 |
| MS.gene032434.t1 | MTR_0090s0020 | 30.645 | 186 | 108 | 8 | 72 | 247 | 72 | 246 | 7.41e-11 | 64.3 |
| MS.gene032434.t1 | MTR_3g020320 | 33.333 | 123 | 74 | 3 | 70 | 188 | 77 | 195 | 9.45e-11 | 63.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene032434.t1 | AT5G18470 | 32.670 | 352 | 197 | 14 | 32 | 346 | 31 | 379 | 2.09e-41 | 150 |
| MS.gene032434.t1 | AT3G16030 | 28.916 | 332 | 195 | 10 | 71 | 365 | 84 | 411 | 4.69e-28 | 116 |
| MS.gene032434.t1 | AT3G16030 | 28.916 | 332 | 195 | 10 | 71 | 365 | 84 | 411 | 4.69e-28 | 116 |
| MS.gene032434.t1 | AT3G16030 | 28.916 | 332 | 195 | 10 | 71 | 365 | 84 | 411 | 4.69e-28 | 116 |
| MS.gene032434.t1 | AT3G16030 | 28.916 | 332 | 195 | 10 | 71 | 365 | 84 | 411 | 6.44e-28 | 116 |
| MS.gene032434.t1 | AT3G16030 | 28.916 | 332 | 195 | 10 | 71 | 365 | 73 | 400 | 6.89e-28 | 116 |
| MS.gene032434.t1 | AT3G16030 | 28.916 | 332 | 195 | 10 | 71 | 365 | 84 | 411 | 8.12e-28 | 115 |
| MS.gene032434.t1 | AT3G16030 | 28.916 | 332 | 195 | 10 | 71 | 365 | 84 | 411 | 1.08e-27 | 115 |
| MS.gene032434.t1 | AT1G67520 | 34.568 | 243 | 140 | 8 | 72 | 298 | 79 | 318 | 6.02e-26 | 110 |
| MS.gene032434.t1 | AT1G67520 | 43.571 | 140 | 76 | 3 | 72 | 209 | 79 | 217 | 8.02e-26 | 109 |
| MS.gene032434.t1 | AT1G67520 | 43.571 | 140 | 76 | 3 | 72 | 209 | 79 | 217 | 1.16e-25 | 109 |
| MS.gene032434.t1 | AT1G67520 | 43.571 | 140 | 76 | 3 | 72 | 209 | 79 | 217 | 2.34e-25 | 108 |
| MS.gene032434.t1 | AT1G67520 | 43.571 | 140 | 76 | 3 | 72 | 209 | 86 | 224 | 2.37e-25 | 108 |
| MS.gene032434.t1 | AT3G12000 | 27.761 | 335 | 193 | 12 | 70 | 359 | 86 | 416 | 1.41e-21 | 96.3 |
| MS.gene032434.t1 | AT4G21380 | 26.509 | 381 | 227 | 14 | 20 | 356 | 33 | 404 | 9.91e-20 | 91.7 |
| MS.gene032434.t1 | AT4G21380 | 26.509 | 381 | 227 | 14 | 20 | 356 | 33 | 404 | 1.56e-19 | 91.3 |
| MS.gene032434.t1 | AT1G65790 | 26.190 | 336 | 191 | 14 | 70 | 359 | 77 | 401 | 2.62e-18 | 87.4 |
| MS.gene032434.t1 | AT1G65790 | 26.190 | 336 | 191 | 14 | 70 | 359 | 77 | 401 | 2.62e-18 | 87.4 |
| MS.gene032434.t1 | AT1G65790 | 26.190 | 336 | 191 | 14 | 70 | 359 | 77 | 401 | 3.83e-18 | 87.0 |
| MS.gene032434.t1 | AT1G11340 | 24.620 | 329 | 192 | 9 | 70 | 350 | 135 | 455 | 6.86e-18 | 86.3 |
| MS.gene032434.t1 | AT1G11340 | 24.620 | 329 | 192 | 9 | 70 | 350 | 135 | 455 | 7.71e-18 | 85.9 |
| MS.gene032434.t1 | AT1G11340 | 24.924 | 329 | 191 | 10 | 70 | 350 | 67 | 387 | 1.17e-17 | 85.5 |
| MS.gene032434.t1 | AT3G16030 | 28.137 | 263 | 150 | 8 | 139 | 365 | 8 | 267 | 2.19e-16 | 81.6 |
| MS.gene032434.t1 | AT4G21390 | 31.556 | 225 | 132 | 12 | 11 | 221 | 13 | 229 | 2.60e-15 | 78.2 |
| MS.gene032434.t1 | AT4G21390 | 31.556 | 225 | 132 | 12 | 11 | 221 | 13 | 229 | 2.89e-15 | 78.2 |
| MS.gene032434.t1 | AT1G61610 | 29.615 | 260 | 149 | 12 | 20 | 260 | 27 | 271 | 3.31e-14 | 74.7 |
| MS.gene032434.t1 | AT1G61610 | 29.615 | 260 | 149 | 12 | 20 | 260 | 27 | 271 | 3.99e-14 | 74.7 |
| MS.gene032434.t1 | AT1G11330 | 32.414 | 145 | 89 | 4 | 70 | 209 | 82 | 222 | 7.26e-14 | 73.9 |
| MS.gene032434.t1 | AT1G11330 | 32.414 | 145 | 89 | 4 | 70 | 209 | 82 | 222 | 7.33e-14 | 73.9 |
| MS.gene032434.t1 | AT1G11330 | 32.414 | 145 | 89 | 4 | 70 | 209 | 82 | 222 | 7.66e-14 | 73.9 |
| MS.gene032434.t1 | AT1G11410 | 23.837 | 344 | 202 | 11 | 70 | 361 | 70 | 405 | 1.40e-13 | 72.8 |
| MS.gene032434.t1 | AT1G11410 | 23.837 | 344 | 202 | 11 | 70 | 361 | 46 | 381 | 1.43e-13 | 72.8 |
| MS.gene032434.t1 | AT1G11410 | 23.837 | 344 | 202 | 11 | 70 | 361 | 77 | 412 | 1.44e-13 | 72.8 |
| MS.gene032434.t1 | AT1G61380 | 32.317 | 164 | 100 | 6 | 59 | 216 | 57 | 215 | 4.57e-13 | 71.2 |
| MS.gene032434.t1 | AT4G27290 | 23.881 | 402 | 243 | 16 | 10 | 358 | 11 | 402 | 7.03e-13 | 70.9 |
| MS.gene032434.t1 | AT4G27290 | 23.881 | 402 | 243 | 16 | 10 | 358 | 11 | 402 | 8.20e-13 | 70.5 |
| MS.gene032434.t1 | AT1G65800 | 24.699 | 332 | 205 | 12 | 70 | 359 | 77 | 405 | 8.81e-13 | 70.1 |
| MS.gene032434.t1 | AT4G27300 | 24.332 | 337 | 199 | 12 | 72 | 358 | 76 | 406 | 1.11e-12 | 70.1 |
| MS.gene032434.t1 | AT1G11280 | 32.680 | 153 | 94 | 6 | 72 | 221 | 77 | 223 | 1.40e-12 | 69.7 |
| MS.gene032434.t1 | AT1G11280 | 32.680 | 153 | 94 | 6 | 72 | 221 | 77 | 223 | 1.41e-12 | 69.7 |
| MS.gene032434.t1 | AT1G11280 | 32.680 | 153 | 94 | 6 | 72 | 221 | 87 | 233 | 1.46e-12 | 69.7 |
| MS.gene032434.t1 | AT1G65800 | 24.699 | 332 | 205 | 12 | 70 | 359 | 77 | 405 | 1.47e-12 | 69.7 |
| MS.gene032434.t1 | AT1G11300 | 31.818 | 154 | 91 | 6 | 65 | 209 | 70 | 218 | 1.52e-12 | 69.7 |
| MS.gene032434.t1 | AT1G11280 | 32.680 | 153 | 94 | 6 | 72 | 221 | 87 | 233 | 1.57e-12 | 69.7 |
| MS.gene032434.t1 | AT1G11280 | 32.680 | 153 | 94 | 6 | 72 | 221 | 77 | 223 | 1.65e-12 | 69.3 |
| MS.gene032434.t1 | AT1G11300 | 31.818 | 154 | 91 | 6 | 65 | 209 | 70 | 218 | 1.66e-12 | 69.7 |
| MS.gene032434.t1 | AT1G61360 | 34.043 | 141 | 85 | 5 | 72 | 209 | 69 | 204 | 1.77e-12 | 69.7 |
| MS.gene032434.t1 | AT1G11350 | 22.535 | 355 | 192 | 12 | 70 | 361 | 70 | 404 | 2.03e-12 | 69.3 |
| MS.gene032434.t1 | AT1G11303 | 30.201 | 149 | 90 | 5 | 70 | 209 | 75 | 218 | 2.25e-12 | 69.3 |
| MS.gene032434.t1 | AT2G19130 | 23.881 | 201 | 148 | 4 | 67 | 262 | 67 | 267 | 3.05e-12 | 68.9 |
| MS.gene032434.t1 | AT5G39370 | 32.759 | 116 | 77 | 1 | 72 | 186 | 11 | 126 | 1.29e-11 | 62.0 |
| MS.gene032434.t1 | AT1G61390 | 26.396 | 197 | 133 | 7 | 72 | 262 | 91 | 281 | 7.31e-11 | 64.3 |
Find 75 sgRNAs with CRISPR-Local
Find 86 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TAATCACTTAAAATAATATT+TGG | 0.104276 | 8.3:+50749283 | None:intergenic |
| GATGATTCTCTACCAAATTT+AGG | 0.190491 | 8.3:-50749918 | MS.gene032434:CDS |
| TTCAACACAAGATGTTAATT+TGG | 0.198202 | 8.3:-50749361 | MS.gene032434:CDS |
| AACTGCTGAATCTGAATTAA+TGG | 0.214171 | 8.3:+50750205 | None:intergenic |
| AGGCTAAATTCACCTAAATT+TGG | 0.228826 | 8.3:+50749906 | None:intergenic |
| TGGCTTTACCAAGGTGTAAA+AGG | 0.288350 | 8.3:+50749326 | None:intergenic |
| TTGTCCATCTTTGGTCTTCC+CGG | 0.292759 | 8.3:+50749516 | None:intergenic |
| ATTGTTGCATTGTCCATCTT+TGG | 0.293538 | 8.3:+50749507 | None:intergenic |
| AGTTGCCACAGTGTTGCTTA+TGG | 0.293878 | 8.3:+50750103 | None:intergenic |
| ATGTTCAATTCACCTTGTTT+TGG | 0.297418 | 8.3:+50749873 | None:intergenic |
| GTTCTATCACTAGATTATTC+TGG | 0.299017 | 8.3:-50750185 | MS.gene032434:CDS |
| ATAATATGTCATTGGTTTCA+TGG | 0.323659 | 8.3:-50749944 | MS.gene032434:CDS |
| AAGATGTTAATTTGGAGATT+CGG | 0.325483 | 8.3:-50749353 | MS.gene032434:CDS |
| AGATGTTAATTTGGAGATTC+GGG | 0.330822 | 8.3:-50749352 | MS.gene032434:CDS |
| TTGATGATAAGTACTGTTAC+AGG | 0.336207 | 8.3:-50750260 | MS.gene032434:CDS |
| GGTGAAGAGTAAATGATCTT+TGG | 0.336292 | 8.3:+50750131 | None:intergenic |
| CTGGATGTGTATTCTATTCA+TGG | 0.336697 | 8.3:-50749386 | MS.gene032434:CDS |
| GGGAGGACATACCGACTTGC+AGG | 0.368929 | 8.3:-50749566 | MS.gene032434:CDS |
| TTGATCCCAACGATGAAGTT+AGG | 0.370271 | 8.3:-50749987 | MS.gene032434:CDS |
| TGCTTTGTTTAGAACATAGC+TGG | 0.378432 | 8.3:+50750312 | None:intergenic |
| CTTCAACAACTTCACACAAA+TGG | 0.378989 | 8.3:-50750056 | MS.gene032434:CDS |
| TTGTTGAAGCACAAAGTTAC+CGG | 0.390851 | 8.3:+50750070 | None:intergenic |
| ACTGCTGAATCTGAATTAAT+GGG | 0.394025 | 8.3:+50750206 | None:intergenic |
| AATCACTTAAAATAATATTT+GGG | 0.395548 | 8.3:+50749284 | None:intergenic |
| GTTGCCACAGTGTTGCTTAT+GGG | 0.399006 | 8.3:+50750104 | None:intergenic |
| TAGGTGAATTTAGCCTTGAA+TGG | 0.403518 | 8.3:-50749899 | MS.gene032434:CDS |
| GCTAATGCAGATATATGTTA+TGG | 0.415879 | 8.3:-50749618 | MS.gene032434:CDS |
| AACAAGACATAATATGTCAT+TGG | 0.418165 | 8.3:-50749952 | MS.gene032434:CDS |
| AGAAACGCGGCAAAGTGTAT+TGG | 0.461030 | 8.3:-50749848 | MS.gene032434:CDS |
| AGGTGAATTTAGCCTTGAAT+GGG | 0.461259 | 8.3:-50749898 | MS.gene032434:CDS |
| TTCAACAACTTCACACAAAT+GGG | 0.463790 | 8.3:-50750055 | MS.gene032434:CDS |
| TAACTCCTAACTTCATCGTT+GGG | 0.464802 | 8.3:+50749982 | None:intergenic |
| ATTTCTTCGAAGGGGAGGTT+AGG | 0.466368 | 8.3:-50749678 | MS.gene032434:CDS |
| TATGTCATTGGTTTCATGGT+TGG | 0.469539 | 8.3:-50749940 | MS.gene032434:CDS |
| ATACCGACTTGCAGGGAACT+TGG | 0.469708 | 8.3:-50749558 | MS.gene032434:CDS |
| CGATGGTTCATTTCTTCGAA+GGG | 0.475746 | 8.3:-50749687 | MS.gene032434:CDS |
| TCTATACGTTGAACTTCCGT+TGG | 0.493374 | 8.3:+50749783 | None:intergenic |
| TATGGATATAATAATGATGC+AGG | 0.495678 | 8.3:-50749600 | MS.gene032434:CDS |
| GAATCATATGAAAATTTGAC+TGG | 0.500982 | 8.3:-50749405 | MS.gene032434:CDS |
| TGGAGAAATTGTAATTGCTA+TGG | 0.503484 | 8.3:-50749435 | MS.gene032434:CDS |
| CTTTCAAAGTTAAAGATGGC+GGG | 0.511471 | 8.3:-50749719 | MS.gene032434:CDS |
| GATGATGGAAACATTGATAG+TGG | 0.517293 | 8.3:-50749648 | MS.gene032434:CDS |
| AGGTTAGGAAGTACTGATGA+TGG | 0.518723 | 8.3:-50749663 | MS.gene032434:CDS |
| AAAGCCGGGAAGACCAAAGA+TGG | 0.525116 | 8.3:-50749520 | MS.gene032434:CDS |
| TTAACTCCTAACTTCATCGT+TGG | 0.526534 | 8.3:+50749981 | None:intergenic |
| TGATATACTTATGGTTGTGG+TGG | 0.531974 | 8.3:-50750409 | MS.gene032434:CDS |
| AGCGGAAAACGTAAAAGTAA+TGG | 0.533129 | 8.3:-50749822 | MS.gene032434:CDS |
| TTGTAATTCAATGTATCACC+TGG | 0.534404 | 8.3:+50750338 | None:intergenic |
| ACGATGGTTCATTTCTTCGA+AGG | 0.543027 | 8.3:-50749688 | MS.gene032434:CDS |
| TGAGCTGTTTCAGAGAAAGC+CGG | 0.544516 | 8.3:-50749535 | MS.gene032434:CDS |
| ATAAGTACTGTTACAGGCAC+AGG | 0.546649 | 8.3:-50750254 | MS.gene032434:CDS |
| CGTTGGGATCAAAGTGTCTG+TGG | 0.556580 | 8.3:+50749998 | None:intergenic |
| GAGCTGTTTCAGAGAAAGCC+GGG | 0.557792 | 8.3:-50749534 | MS.gene032434:CDS |
| GCAAATGATAGTTTGAAGCC+AGG | 0.577293 | 8.3:-50750356 | MS.gene032434:CDS |
| ACAGTGTTGCTTATGGGTTG+AGG | 0.580661 | 8.3:+50750110 | None:intergenic |
| GCTTTGTTTAGAACATAGCT+GGG | 0.581931 | 8.3:+50750313 | None:intergenic |
| CTGTTACAGGCACAGGAGTG+TGG | 0.584502 | 8.3:-50750247 | MS.gene032434:CDS |
| TCTTTCAAAGTTAAAGATGG+CGG | 0.584991 | 8.3:-50749720 | MS.gene032434:CDS |
| GGTTCATTTCTTCGAAGGGG+AGG | 0.585987 | 8.3:-50749683 | MS.gene032434:CDS |
| CTTGAATGGGAACCAAAACA+AGG | 0.602343 | 8.3:-50749885 | MS.gene032434:CDS |
| GGCAAAGTGTATTGGAAAAG+CGG | 0.607288 | 8.3:-50749840 | MS.gene032434:CDS |
| GGAGGACATACCGACTTGCA+GGG | 0.629928 | 8.3:-50749565 | MS.gene032434:CDS |
| GTTGGGATCAAAGTGTCTGT+GGG | 0.631835 | 8.3:+50749999 | None:intergenic |
| AATATTTGAGAACATTCCAA+CGG | 0.640176 | 8.3:-50749799 | MS.gene032434:CDS |
| GTGACTGCAAGATGACATGT+TGG | 0.643302 | 8.3:-50749455 | MS.gene032434:CDS |
| CAATGCAACAATGTTTGAAG+AGG | 0.664539 | 8.3:-50749496 | MS.gene032434:CDS |
| GATGGTTCATTTCTTCGAAG+GGG | 0.669861 | 8.3:-50749686 | MS.gene032434:CDS |
| TCACCAAGTTCCCTGCAAGT+CGG | 0.671974 | 8.3:+50749555 | None:intergenic |
| CTGCTGAATCTGAATTAATG+GGG | 0.672536 | 8.3:+50750207 | None:intergenic |
| ATGGCGGGAAGTTTATACGA+TGG | 0.685102 | 8.3:-50749704 | MS.gene032434:CDS |
| GTGGCAACTATGTTAGACAC+CGG | 0.700231 | 8.3:-50750089 | MS.gene032434:CDS |
| ATGGATATAATAATGATGCA+GGG | 0.701033 | 8.3:-50749599 | MS.gene032434:CDS |
| GAATTGAACATCAAGAAACG+CGG | 0.722575 | 8.3:-50749861 | MS.gene032434:CDS |
| ATGGGACAAAGAGTATACTG+TGG | 0.768311 | 8.3:-50750037 | MS.gene032434:CDS |
| TCAACCCATAAGCAACACTG+TGG | 0.788225 | 8.3:-50750108 | MS.gene032434:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | AAATTGTTTTGATATACTTA+TGG | - | chr8.3:50749315-50749334 | MS.gene032434:CDS | 15.0% |
| !!! | TCAAATTTTCATATGATTCT+TGG | + | chr8.3:50750327-50750346 | None:intergenic | 20.0% |
| !!! | TTTTCTTTCAAAGTTAAAGA+TGG | - | chr8.3:50750010-50750029 | MS.gene032434:CDS | 20.0% |
| ! | AACAAGACATAATATGTCAT+TGG | - | chr8.3:50749781-50749800 | MS.gene032434:CDS | 25.0% |
| ! | AATATTTGAGAACATTCCAA+CGG | - | chr8.3:50749934-50749953 | MS.gene032434:CDS | 25.0% |
| ! | ATGGATATAATAATGATGCA+GGG | - | chr8.3:50750134-50750153 | MS.gene032434:CDS | 25.0% |
| ! | GAATCATATGAAAATTTGAC+TGG | - | chr8.3:50750328-50750347 | MS.gene032434:CDS | 25.0% |
| ! | TATGGATATAATAATGATGC+AGG | - | chr8.3:50750133-50750152 | MS.gene032434:CDS | 25.0% |
| ! | TTCAACACAAGATGTTAATT+TGG | - | chr8.3:50750372-50750391 | MS.gene032434:CDS | 25.0% |
| !! | AAGATGTTAATTTGGAGATT+CGG | - | chr8.3:50750380-50750399 | MS.gene032434:CDS | 25.0% |
| !! | TTTTGATATACTTATGGTTG+TGG | - | chr8.3:50749321-50749340 | MS.gene032434:CDS | 25.0% |
| !! | TTTTGTCTTCTATTCAATGT+TGG | - | chr8.3:50749446-50749465 | MS.gene032434:CDS | 25.0% |
| !!! | ATAATATGTCATTGGTTTCA+TGG | - | chr8.3:50749789-50749808 | MS.gene032434:CDS | 25.0% |
| AACTGCTGAATCTGAATTAA+TGG | + | chr8.3:50749531-50749550 | None:intergenic | 30.0% | |
| ACTGCTGAATCTGAATTAAT+GGG | + | chr8.3:50749530-50749549 | None:intergenic | 30.0% | |
| AGGCTAAATTCACCTAAATT+TGG | + | chr8.3:50749830-50749849 | None:intergenic | 30.0% | |
| GATGATTCTCTACCAAATTT+AGG | - | chr8.3:50749815-50749834 | MS.gene032434:CDS | 30.0% | |
| GCTAATGCAGATATATGTTA+TGG | - | chr8.3:50750115-50750134 | MS.gene032434:CDS | 30.0% | |
| GTTCTATCACTAGATTATTC+TGG | - | chr8.3:50749548-50749567 | MS.gene032434:CDS | 30.0% | |
| TCTTTCAAAGTTAAAGATGG+CGG | - | chr8.3:50750013-50750032 | MS.gene032434:CDS | 30.0% | |
| TGGAGAAATTGTAATTGCTA+TGG | - | chr8.3:50750298-50750317 | MS.gene032434:CDS | 30.0% | |
| TTCAACAACTTCACACAAAT+GGG | - | chr8.3:50749678-50749697 | MS.gene032434:CDS | 30.0% | |
| TTGTAATTCAATGTATCACC+TGG | + | chr8.3:50749398-50749417 | None:intergenic | 30.0% | |
| ! | AGATGTTAATTTGGAGATTC+GGG | - | chr8.3:50750381-50750400 | MS.gene032434:CDS | 30.0% |
| ! | GAATTCAGATCTGATTTTGT+TGG | + | chr8.3:50750430-50750449 | None:intergenic | 30.0% |
| ! | TTGATGATAAGTACTGTTAC+AGG | - | chr8.3:50749473-50749492 | MS.gene032434:CDS | 30.0% |
| !! | ATGTTCAATTCACCTTGTTT+TGG | + | chr8.3:50749863-50749882 | None:intergenic | 30.0% |
| AGCGGAAAACGTAAAAGTAA+TGG | - | chr8.3:50749911-50749930 | MS.gene032434:CDS | 35.0% | |
| ATTGTTGCATTGTCCATCTT+TGG | + | chr8.3:50750229-50750248 | None:intergenic | 35.0% | |
| CAATGCAACAATGTTTGAAG+AGG | - | chr8.3:50750237-50750256 | MS.gene032434:CDS | 35.0% | |
| CTGCTGAATCTGAATTAATG+GGG | + | chr8.3:50749529-50749548 | None:intergenic | 35.0% | |
| CTGGATGTGTATTCTATTCA+TGG | - | chr8.3:50750347-50750366 | MS.gene032434:CDS | 35.0% | |
| CTTCAACAACTTCACACAAA+TGG | - | chr8.3:50749677-50749696 | MS.gene032434:CDS | 35.0% | |
| CTTTCAAAGTTAAAGATGGC+GGG | - | chr8.3:50750014-50750033 | MS.gene032434:CDS | 35.0% | |
| GAATTGAACATCAAGAAACG+CGG | - | chr8.3:50749872-50749891 | MS.gene032434:CDS | 35.0% | |
| GGTGAAGAGTAAATGATCTT+TGG | + | chr8.3:50749605-50749624 | None:intergenic | 35.0% | |
| TAACTCCTAACTTCATCGTT+GGG | + | chr8.3:50749754-50749773 | None:intergenic | 35.0% | |
| TGATATACTTATGGTTGTGG+TGG | - | chr8.3:50749324-50749343 | MS.gene032434:CDS | 35.0% | |
| TTAACTCCTAACTTCATCGT+TGG | + | chr8.3:50749755-50749774 | None:intergenic | 35.0% | |
| TTGTTGAAGCACAAAGTTAC+CGG | + | chr8.3:50749666-50749685 | None:intergenic | 35.0% | |
| !! | AGGTGAATTTAGCCTTGAAT+GGG | - | chr8.3:50749835-50749854 | MS.gene032434:CDS | 35.0% |
| !! | GATGATGGAAACATTGATAG+TGG | - | chr8.3:50750085-50750104 | MS.gene032434:CDS | 35.0% |
| !! | GCTTTGTTTAGAACATAGCT+GGG | + | chr8.3:50749423-50749442 | None:intergenic | 35.0% |
| !! | TAGGTGAATTTAGCCTTGAA+TGG | - | chr8.3:50749834-50749853 | MS.gene032434:CDS | 35.0% |
| !! | TATGTCATTGGTTTCATGGT+TGG | - | chr8.3:50749793-50749812 | MS.gene032434:CDS | 35.0% |
| !! | TGCTTTGTTTAGAACATAGC+TGG | + | chr8.3:50749424-50749443 | None:intergenic | 35.0% |
| !!! | TGATTTTGTTGGCTTTACCA+AGG | + | chr8.3:50750419-50750438 | None:intergenic | 35.0% |
| ACGATGGTTCATTTCTTCGA+AGG | - | chr8.3:50750045-50750064 | MS.gene032434:CDS | 40.0% | |
| CGATGGTTCATTTCTTCGAA+GGG | - | chr8.3:50750046-50750065 | MS.gene032434:CDS | 40.0% | |
| CTTGAATGGGAACCAAAACA+AGG | - | chr8.3:50749848-50749867 | MS.gene032434:CDS | 40.0% | |
| GATGGTTCATTTCTTCGAAG+GGG | - | chr8.3:50750047-50750066 | MS.gene032434:CDS | 40.0% | |
| GGCAAAGTGTATTGGAAAAG+CGG | - | chr8.3:50749893-50749912 | MS.gene032434:CDS | 40.0% | |
| TCTATACGTTGAACTTCCGT+TGG | + | chr8.3:50749953-50749972 | None:intergenic | 40.0% | |
| TTGATCCCAACGATGAAGTT+AGG | - | chr8.3:50749746-50749765 | MS.gene032434:CDS | 40.0% | |
| ! | ATAAGTACTGTTACAGGCAC+AGG | - | chr8.3:50749479-50749498 | MS.gene032434:CDS | 40.0% |
| ! | ATGGGACAAAGAGTATACTG+TGG | - | chr8.3:50749696-50749715 | MS.gene032434:CDS | 40.0% |
| ! | GCAAATGATAGTTTGAAGCC+AGG | - | chr8.3:50749377-50749396 | MS.gene032434:CDS | 40.0% |
| ! | TGGCTTTACCAAGGTGTAAA+AGG | + | chr8.3:50750410-50750429 | None:intergenic | 40.0% |
| !! | AGGTTAGGAAGTACTGATGA+TGG | - | chr8.3:50750070-50750089 | MS.gene032434:CDS | 40.0% |
| !!! | CTTGTTTTGGTTCCCATTCA+AGG | + | chr8.3:50749850-50749869 | None:intergenic | 40.0% |
| AGAAACGCGGCAAAGTGTAT+TGG | - | chr8.3:50749885-50749904 | MS.gene032434:CDS | 45.0% | |
| ATTTCTTCGAAGGGGAGGTT+AGG | - | chr8.3:50750055-50750074 | MS.gene032434:CDS | 45.0% | |
| GTGACTGCAAGATGACATGT+TGG | - | chr8.3:50750278-50750297 | MS.gene032434:CDS | 45.0% | |
| GTGGCAACTATGTTAGACAC+CGG | - | chr8.3:50749644-50749663 | MS.gene032434:CDS | 45.0% | |
| TCAACCCATAAGCAACACTG+TGG | - | chr8.3:50749625-50749644 | MS.gene032434:CDS | 45.0% | |
| ! | ATGATGCAGGGTGCCAAAAA+TGG | - | chr8.3:50750146-50750165 | MS.gene032434:CDS | 45.0% |
| ! | ATGGCGGGAAGTTTATACGA+TGG | - | chr8.3:50750029-50750048 | MS.gene032434:CDS | 45.0% |
| ! | GTTGGGATCAAAGTGTCTGT+GGG | + | chr8.3:50749737-50749756 | None:intergenic | 45.0% |
| ! | TCGGGATACCTTTTACACCT+TGG | - | chr8.3:50750399-50750418 | MS.gene032434:CDS | 45.0% |
| ! | TCGGTATGTCCTCCCATTTT+TGG | + | chr8.3:50750162-50750181 | None:intergenic | 45.0% |
| ! | TGAGCTGTTTCAGAGAAAGC+CGG | - | chr8.3:50750198-50750217 | MS.gene032434:CDS | 45.0% |
| ! | TGATGCAGGGTGCCAAAAAT+GGG | - | chr8.3:50750147-50750166 | MS.gene032434:CDS | 45.0% |
| ! | TTGTCCATCTTTGGTCTTCC+CGG | + | chr8.3:50750220-50750239 | None:intergenic | 45.0% |
| !! | ACAGTGTTGCTTATGGGTTG+AGG | + | chr8.3:50749626-50749645 | None:intergenic | 45.0% |
| !! | AGTTGCCACAGTGTTGCTTA+TGG | + | chr8.3:50749633-50749652 | None:intergenic | 45.0% |
| !! | GTTGCCACAGTGTTGCTTAT+GGG | + | chr8.3:50749632-50749651 | None:intergenic | 45.0% |
| AAAGCCGGGAAGACCAAAGA+TGG | - | chr8.3:50750213-50750232 | MS.gene032434:CDS | 50.0% | |
| GGTTCATTTCTTCGAAGGGG+AGG | - | chr8.3:50750050-50750069 | MS.gene032434:CDS | 50.0% | |
| TCACCAAGTTCCCTGCAAGT+CGG | + | chr8.3:50750181-50750200 | None:intergenic | 50.0% | |
| ! | CGTTGGGATCAAAGTGTCTG+TGG | + | chr8.3:50749738-50749757 | None:intergenic | 50.0% |
| ! | GAGCTGTTTCAGAGAAAGCC+GGG | - | chr8.3:50750199-50750218 | MS.gene032434:CDS | 50.0% |
| !! | ATACCGACTTGCAGGGAACT+TGG | - | chr8.3:50750175-50750194 | MS.gene032434:CDS | 50.0% |
| CTGTTACAGGCACAGGAGTG+TGG | - | chr8.3:50749486-50749505 | MS.gene032434:CDS | 55.0% | |
| ! | TGCAGGGTGCCAAAAATGGG+AGG | - | chr8.3:50750150-50750169 | MS.gene032434:CDS | 55.0% |
| !! | GGAGGACATACCGACTTGCA+GGG | - | chr8.3:50750168-50750187 | MS.gene032434:CDS | 55.0% |
| !! | GGGAGGACATACCGACTTGC+AGG | - | chr8.3:50750167-50750186 | MS.gene032434:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 50749290 | 50750465 | 50749290 | ID=MS.gene032434 |
| chr8.3 | mRNA | 50749290 | 50750465 | 50749290 | ID=MS.gene032434.t1;Parent=MS.gene032434 |
| chr8.3 | exon | 50749290 | 50750465 | 50749290 | ID=MS.gene032434.t1.exon1;Parent=MS.gene032434.t1 |
| chr8.3 | CDS | 50749290 | 50750465 | 50749290 | ID=cds.MS.gene032434.t1;Parent=MS.gene032434.t1 |
| Gene Sequence |
| Protein sequence |
