Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene032908.t1 | XP_024639766.1 | 96.3 | 438 | 16 | 0 | 1 | 438 | 18 | 455 | 5.60E-245 | 856.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene032908.t1 | O80612 | 57.8 | 441 | 174 | 4 | 8 | 436 | 24 | 464 | 1.2e-136 | 488.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene032908.t1 | G7KF86 | 96.3 | 438 | 16 | 0 | 1 | 438 | 18 | 455 | 4.0e-245 | 856.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene032908 | MS.gene070577 | PPI |
| MS.gene032908 | MS.gene55224 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene032908.t1 | MTR_5g040710 | 96.347 | 438 | 16 | 0 | 1 | 438 | 18 | 455 | 0.0 | 887 |
| MS.gene032908.t1 | MTR_7g085150 | 29.602 | 402 | 227 | 14 | 57 | 430 | 61 | 434 | 9.55e-41 | 153 |
| MS.gene032908.t1 | MTR_7g085120 | 30.075 | 399 | 218 | 16 | 62 | 430 | 45 | 412 | 1.14e-40 | 152 |
| MS.gene032908.t1 | MTR_7g085090 | 27.669 | 459 | 253 | 13 | 18 | 429 | 6 | 432 | 4.69e-40 | 151 |
| MS.gene032908.t1 | MTR_7g085150 | 29.500 | 400 | 226 | 14 | 57 | 428 | 61 | 432 | 6.44e-40 | 150 |
| MS.gene032908.t1 | MTR_7g085200 | 30.000 | 400 | 226 | 14 | 57 | 430 | 39 | 410 | 2.93e-39 | 148 |
| MS.gene032908.t1 | MTR_5g025280 | 26.339 | 448 | 273 | 13 | 40 | 443 | 81 | 515 | 8.58e-39 | 150 |
| MS.gene032908.t1 | MTR_7g085180 | 31.737 | 334 | 186 | 11 | 57 | 373 | 40 | 348 | 1.54e-38 | 146 |
| MS.gene032908.t1 | MTR_7g085200 | 29.602 | 402 | 227 | 14 | 57 | 430 | 39 | 412 | 9.83e-38 | 144 |
| MS.gene032908.t1 | MTR_6g033000 | 28.040 | 403 | 237 | 12 | 55 | 430 | 72 | 448 | 9.04e-37 | 142 |
| MS.gene032908.t1 | MTR_8g072360 | 26.879 | 439 | 251 | 14 | 49 | 429 | 89 | 515 | 1.46e-34 | 138 |
| MS.gene032908.t1 | MTR_4g105480 | 25.926 | 486 | 292 | 17 | 19 | 443 | 5 | 483 | 2.25e-33 | 133 |
| MS.gene032908.t1 | MTR_4g036220 | 25.974 | 385 | 219 | 15 | 62 | 430 | 55 | 389 | 9.79e-26 | 109 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene032908.t1 | AT2G02970 | 57.823 | 441 | 174 | 4 | 8 | 436 | 24 | 464 | 7.13e-175 | 504 |
| MS.gene032908.t1 | AT1G14230 | 53.846 | 416 | 183 | 3 | 26 | 436 | 43 | 454 | 6.25e-161 | 466 |
| MS.gene032908.t1 | AT1G14250 | 51.678 | 447 | 195 | 5 | 8 | 437 | 5 | 447 | 1.54e-160 | 465 |
| MS.gene032908.t1 | AT1G14240 | 54.737 | 380 | 164 | 3 | 60 | 436 | 68 | 442 | 6.36e-148 | 432 |
| MS.gene032908.t1 | AT1G14240 | 54.737 | 380 | 164 | 3 | 60 | 436 | 68 | 442 | 6.36e-148 | 432 |
| MS.gene032908.t1 | AT1G14240 | 54.737 | 380 | 164 | 3 | 60 | 436 | 68 | 442 | 6.36e-148 | 432 |
| MS.gene032908.t1 | AT1G14240 | 53.684 | 380 | 164 | 4 | 60 | 436 | 68 | 438 | 1.47e-142 | 419 |
| MS.gene032908.t1 | AT4G19180 | 28.369 | 423 | 269 | 12 | 37 | 429 | 121 | 539 | 7.08e-41 | 157 |
| MS.gene032908.t1 | AT4G19180 | 28.369 | 423 | 269 | 12 | 37 | 429 | 121 | 539 | 7.08e-41 | 157 |
| MS.gene032908.t1 | AT4G19180 | 28.369 | 423 | 269 | 12 | 37 | 429 | 121 | 539 | 7.08e-41 | 157 |
| MS.gene032908.t1 | AT3G04080 | 28.101 | 395 | 229 | 12 | 62 | 429 | 70 | 436 | 1.40e-34 | 135 |
| MS.gene032908.t1 | AT5G18280 | 27.638 | 398 | 229 | 11 | 62 | 430 | 71 | 438 | 1.67e-34 | 135 |
Find 147 sgRNAs with CRISPR-Local
Find 441 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCACGCACTATTAAATT+TGG | 0.087243 | 5.3:-28591736 | MS.gene032908:CDS |
| AATTTCAATGCTGCCATTTC+AGG | 0.213216 | 5.3:+28588422 | None:intergenic |
| GAAATGGCAGCATTGAAATT+TGG | 0.230817 | 5.3:-28588419 | MS.gene032908:CDS |
| GGGTTTCTGGATTTATGTTT+AGG | 0.235825 | 5.3:-28594319 | MS.gene032908:CDS |
| CCGAAAAGTTTCCCCTAGTT+TGG | 0.255231 | 5.3:+28590222 | None:intergenic |
| AGCCACAGCTTGCTTCATTT+TGG | 0.256995 | 5.3:-28591691 | MS.gene032908:CDS |
| TGAAGTTCAAGAGAAGATTT+TGG | 0.262870 | 5.3:-28594363 | MS.gene032908:CDS |
| AGAGATTTGTGGAACGGATT+TGG | 0.271813 | 5.3:+28594786 | None:intergenic |
| GGTTAAATTTGTTGGTTTCT+TGG | 0.274319 | 5.3:-28588556 | MS.gene032908:CDS |
| CTCTGCTTCATGACAGTCTT+GGG | 0.277737 | 5.3:-28589209 | MS.gene032908:CDS |
| GGTTTCTGGATTTATGTTTA+GGG | 0.295943 | 5.3:-28594318 | MS.gene032908:CDS |
| CTTATTCAAGTTCTTAATCT+AGG | 0.299211 | 5.3:+28588345 | None:intergenic |
| GTTTCCCTCCAATTCTCCTT+CGG | 0.320355 | 5.3:+28594431 | None:intergenic |
| GATTTATGTTTAGGGATGAT+TGG | 0.327191 | 5.3:-28594310 | MS.gene032908:CDS |
| TTTCCCTCCAATTCTCCTTC+GGG | 0.334814 | 5.3:+28594432 | None:intergenic |
| GGTTGTTGCTAATCATGCTC+TGG | 0.342945 | 5.3:-28592427 | MS.gene032908:CDS |
| TCACCAGACAGGTGCTCTAT+TGG | 0.344496 | 5.3:-28588496 | MS.gene032908:CDS |
| TGAGCTAGGAGAGGACTTCC+AGG | 0.346879 | 5.3:+28590277 | None:intergenic |
| GATTGGGCTTCTGTTATAAC+AGG | 0.347011 | 5.3:-28594293 | MS.gene032908:intron |
| TGACAGTCTTGGGATTGATA+TGG | 0.358116 | 5.3:-28589199 | MS.gene032908:CDS |
| AGTCCGGGTTTATCGTCGTT+TGG | 0.361720 | 5.3:-28594518 | MS.gene032908:CDS |
| GGAAACGGAGATTCGGCTTA+TGG | 0.363497 | 5.3:-28594414 | MS.gene032908:CDS |
| ATTTATGTTTAGGGATGATT+GGG | 0.368866 | 5.3:-28594309 | MS.gene032908:CDS |
| AATCATGCTCTGGGGACTCT+TGG | 0.371593 | 5.3:-28592417 | MS.gene032908:CDS |
| GTCCGGGTTTATCGTCGTTT+GGG | 0.376092 | 5.3:-28594517 | MS.gene032908:CDS |
| GGGGAGATCGTTGTTGGAGG+TGG | 0.384223 | 5.3:-28594477 | MS.gene032908:CDS |
| ACTCTTATAATGTTGATTCC+TGG | 0.389848 | 5.3:-28590295 | MS.gene032908:CDS |
| TGGAGAGAAGCGCTTATATC+AGG | 0.389848 | 5.3:-28591171 | MS.gene032908:CDS |
| GGTTTCTATGAGGGTGAGTC+CGG | 0.391703 | 5.3:-28594534 | MS.gene032908:CDS |
| GACGGATCCCGAAGGAGAAT+TGG | 0.392263 | 5.3:-28594439 | MS.gene032908:CDS |
| TGGGAATGATCCGGATGGGG+CGG | 0.393196 | 5.3:-28594498 | MS.gene032908:CDS |
| CACCAGACAGGTGCTCTATT+GGG | 0.394589 | 5.3:-28588495 | MS.gene032908:CDS |
| TCTCACGCACTATTAAATTT+GGG | 0.396563 | 5.3:-28591735 | MS.gene032908:CDS |
| GGCCACTGAGCTTGCGGAAG+TGG | 0.401174 | 5.3:+28588394 | None:intergenic |
| GGAAGGCTATTCAAGCTTGC+GGG | 0.403652 | 5.3:-28588468 | MS.gene032908:CDS |
| GGCGGGGAGATCGTTGTTGG+AGG | 0.403676 | 5.3:-28594480 | MS.gene032908:CDS |
| GGGAATGATCCGGATGGGGC+GGG | 0.408762 | 5.3:-28594497 | MS.gene032908:CDS |
| GGTGTTACTTTGGCCTGAAA+TGG | 0.415265 | 5.3:-28588435 | MS.gene032908:CDS |
| GGAATGATCCGGATGGGGCG+GGG | 0.416695 | 5.3:-28594496 | MS.gene032908:CDS |
| AAGCTTGCGGGTTTGTGGCT+TGG | 0.418452 | 5.3:-28588456 | MS.gene032908:CDS |
| AACGATCTCCCCGCCCCATC+CGG | 0.420560 | 5.3:+28594488 | None:intergenic |
| GGACGGGTTGCAAGTGGGTC+AGG | 0.421255 | 5.3:-28588535 | MS.gene032908:CDS |
| CTGTCCAAGTTAATGACTGC+TGG | 0.422100 | 5.3:-28589336 | MS.gene032908:CDS |
| TATTCAAGCTTGCGGGTTTG+TGG | 0.433370 | 5.3:-28588461 | MS.gene032908:CDS |
| GAGATCGTTGTTGGAGGTGG+TGG | 0.435877 | 5.3:-28594474 | MS.gene032908:CDS |
| AGCATTGGTGCTATTACAAA+AGG | 0.439271 | 5.3:-28590186 | MS.gene032908:CDS |
| AAATTTGTTGGTTTCTTGGA+CGG | 0.439370 | 5.3:-28588552 | MS.gene032908:CDS |
| GACTAAGACGACGGAGGAGT+GGG | 0.446693 | 5.3:+28588367 | None:intergenic |
| ATTCGGCTTATGGCTACTGC+TGG | 0.447016 | 5.3:-28594404 | MS.gene032908:CDS |
| TGGGGCGGGGAGATCGTTGT+TGG | 0.453920 | 5.3:-28594483 | MS.gene032908:CDS |
| GAAGAGTTTGGTTTCTATGA+GGG | 0.454365 | 5.3:-28594543 | MS.gene032908:CDS |
| ATCATCCCACCGTCCAAACT+AGG | 0.456961 | 5.3:-28590235 | MS.gene032908:CDS |
| ATTGGAGGGAAACGGAGATT+CGG | 0.457361 | 5.3:-28594421 | MS.gene032908:CDS |
| GCTCTGCTTCATGACAGTCT+TGG | 0.457574 | 5.3:-28589210 | MS.gene032908:CDS |
| ACTTGGTGGTGCTTCTGCTC+AGG | 0.458271 | 5.3:-28592361 | MS.gene032908:intron |
| TCTTATCAGCATTGCGACAT+AGG | 0.458731 | 5.3:-28590011 | MS.gene032908:CDS |
| ACACTGTAGGTTAAATTTGT+TGG | 0.461798 | 5.3:-28588564 | MS.gene032908:intron |
| GGTGATCCTTCAGAGACTAC+TGG | 0.466899 | 5.3:-28592393 | MS.gene032908:CDS |
| AGAAGAGTTTGGTTTCTATG+AGG | 0.470141 | 5.3:-28594544 | MS.gene032908:CDS |
| CTGATGAAGGAGTGTATGCT+TGG | 0.472336 | 5.3:-28592449 | MS.gene032908:CDS |
| AAGAATACTGTGGAGGGGAT+TGG | 0.472820 | 5.3:-28589311 | MS.gene032908:CDS |
| TTGCCCAGCAGTCATTAACT+TGG | 0.475402 | 5.3:+28589332 | None:intergenic |
| GAAAGATGTGCAACGAGAAT+TGG | 0.476759 | 5.3:+28594745 | None:intergenic |
| ATAGATCCTTGTACTCCTGC+AGG | 0.481561 | 5.3:-28590320 | MS.gene032908:CDS |
| AATTTGTTGGTTTCTTGGAC+GGG | 0.488487 | 5.3:-28588551 | MS.gene032908:CDS |
| GTTGTTGCTAATCATGCTCT+GGG | 0.489198 | 5.3:-28592426 | MS.gene032908:CDS |
| GAAGTAAATCTTCCTCATCA+TGG | 0.494672 | 5.3:+28589262 | None:intergenic |
| TTCCGGCGAGGAAGAGAAAA+CGG | 0.500842 | 5.3:+28594664 | None:intergenic |
| TGCCCAATAGAGCACCTGTC+TGG | 0.502673 | 5.3:+28588493 | None:intergenic |
| ACGGTGGAAGCACAGGAACT+AGG | 0.503705 | 5.3:-28594613 | MS.gene032908:CDS |
| CATGCTCTGGGGACTCTTGG+AGG | 0.505655 | 5.3:-28592414 | MS.gene032908:CDS |
| CGGTGGAAGCACAGGAACTA+GGG | 0.506205 | 5.3:-28594612 | MS.gene032908:CDS |
| GTTTCTATGAGGGTGAGTCC+GGG | 0.508587 | 5.3:-28594533 | MS.gene032908:CDS |
| ATCGTCGTTTGGGAATGATC+CGG | 0.509641 | 5.3:-28594507 | MS.gene032908:CDS |
| TTTGTGGCTTGGTGTTACTT+TGG | 0.512985 | 5.3:-28588445 | MS.gene032908:CDS |
| ACTGGGATTATTGAACTTGG+TGG | 0.517297 | 5.3:-28592375 | MS.gene032908:CDS |
| TCATCCCACCGTCCAAACTA+GGG | 0.519459 | 5.3:-28590234 | MS.gene032908:CDS |
| GCATTGGTGCTATTACAAAA+GGG | 0.522795 | 5.3:-28590185 | MS.gene032908:CDS |
| CGTTTGGGAATGATCCGGAT+GGG | 0.527376 | 5.3:-28594502 | MS.gene032908:CDS |
| TTCCACCGTCGATGATTATC+CGG | 0.529540 | 5.3:+28594627 | None:intergenic |
| GAAGGAGAATTGGAGGGAAA+CGG | 0.530963 | 5.3:-28594429 | MS.gene032908:CDS |
| TATATCAGGAGATTCTAACT+TGG | 0.533486 | 5.3:-28591157 | MS.gene032908:CDS |
| TTCTTGGACGGGTTGCAAGT+GGG | 0.534910 | 5.3:-28588540 | MS.gene032908:CDS |
| GGAGTGCAGATCTGCAGCAT+TGG | 0.536028 | 5.3:-28590201 | MS.gene032908:CDS |
| ATCATCGACGGTGGAAGCAC+AGG | 0.536826 | 5.3:-28594620 | MS.gene032908:CDS |
| GGATCCCGAAGGAGAATTGG+AGG | 0.538031 | 5.3:-28594436 | MS.gene032908:CDS |
| GTTTGGGAATGATCCGGATG+GGG | 0.538211 | 5.3:-28594501 | MS.gene032908:CDS |
| GAGTACCCTGCAGGAGTACA+AGG | 0.538999 | 5.3:+28590314 | None:intergenic |
| ATATCAGGAGATTCTAACTT+GGG | 0.540822 | 5.3:-28591156 | MS.gene032908:intron |
| GAAGCAAGCTGTGGCTGTAA+AGG | 0.542738 | 5.3:+28591698 | None:intergenic |
| GAGGAAGCTGCTCACCAGAC+AGG | 0.544540 | 5.3:-28588507 | MS.gene032908:CDS |
| TTTCTTGGACGGGTTGCAAG+TGG | 0.546941 | 5.3:-28588541 | MS.gene032908:CDS |
| CTGGGCAAGAATACTGTGGA+GGG | 0.548975 | 5.3:-28589317 | MS.gene032908:CDS |
| AAGTAAATCTTCCTCATCAT+GGG | 0.551386 | 5.3:+28589263 | None:intergenic |
| ACTACTGGGATTATTGAACT+TGG | 0.551431 | 5.3:-28592378 | MS.gene032908:CDS |
| GGACTAAGACGACGGAGGAG+TGG | 0.555301 | 5.3:+28588366 | None:intergenic |
| GTGATCCTTCAGAGACTACT+GGG | 0.558471 | 5.3:-28592392 | MS.gene032908:CDS |
| AAATTTCTTTCACACATCAA+AGG | 0.565474 | 5.3:-28589943 | MS.gene032908:intron |
| TTCACTTAGTGAGCTAGGAG+AGG | 0.565962 | 5.3:+28590268 | None:intergenic |
| AGGAAGGCTATTCAAGCTTG+CGG | 0.566183 | 5.3:-28588469 | MS.gene032908:CDS |
| TGATGAAGGAGTGTATGCTT+GGG | 0.566289 | 5.3:-28592448 | MS.gene032908:CDS |
| GGGGATGGCCACTGAGCTTG+CGG | 0.566668 | 5.3:+28588388 | None:intergenic |
| TGTCCAAGTTAATGACTGCT+GGG | 0.567959 | 5.3:-28589335 | MS.gene032908:CDS |
| AAAGTTTCCCCTAGTTTGGA+CGG | 0.568831 | 5.3:+28590226 | None:intergenic |
| ACATTATAAGAGTACCCTGC+AGG | 0.569973 | 5.3:+28590305 | None:intergenic |
| TTCGGCTTATGGCTACTGCT+GGG | 0.570321 | 5.3:-28594403 | MS.gene032908:CDS |
| TCGTTTGGGAATGATCCGGA+TGG | 0.570779 | 5.3:-28594503 | MS.gene032908:CDS |
| TTTCCCCTAGTTTGGACGGT+GGG | 0.571447 | 5.3:+28590230 | None:intergenic |
| CATCGCTTCTCTTGATACAA+AGG | 0.571559 | 5.3:+28591768 | None:intergenic |
| TGGTGGAGTTTGCGAAAAGA+CGG | 0.574091 | 5.3:-28594457 | MS.gene032908:CDS |
| AGCTTCTCAGTATATTCAGA+AGG | 0.575665 | 5.3:-28590351 | MS.gene032908:CDS |
| TTCCCAAACGACGATAAACC+CGG | 0.575784 | 5.3:+28594515 | None:intergenic |
| GCTTCTCAGTATATTCAGAA+GGG | 0.576641 | 5.3:-28590350 | MS.gene032908:CDS |
| GTGCTATTACAAAAGGGGAA+AGG | 0.578562 | 5.3:-28590179 | MS.gene032908:intron |
| TGTGCGAGAGAAGAGATTTG+TGG | 0.580933 | 5.3:+28594775 | None:intergenic |
| ACTAAGACGACGGAGGAGTG+GGG | 0.584402 | 5.3:+28588368 | None:intergenic |
| GCAAGTGGGTCAGGCTGCAG+AGG | 0.587143 | 5.3:-28588526 | MS.gene032908:CDS |
| GTGCTCTATTGGGCAGAGGA+AGG | 0.589164 | 5.3:-28588485 | MS.gene032908:CDS |
| GAGAGAAGAGATTTGTGGAA+CGG | 0.591548 | 5.3:+28594780 | None:intergenic |
| CGTCGATGATTATCCGGTAC+CGG | 0.595219 | 5.3:+28594633 | None:intergenic |
| CTAAGACGACGGAGGAGTGG+GGG | 0.595930 | 5.3:+28588369 | None:intergenic |
| ATAATCCCAGTAGTCTCTGA+AGG | 0.601771 | 5.3:+28592387 | None:intergenic |
| ACAGGTGCTCTATTGGGCAG+AGG | 0.604234 | 5.3:-28588489 | MS.gene032908:CDS |
| AGAATGTTGCTCATGACTCA+TGG | 0.607083 | 5.3:-28591191 | MS.gene032908:CDS |
| TTAATAGTGCGTGAGAACAA+AGG | 0.608213 | 5.3:+28591742 | None:intergenic |
| TGCGAAAAGACGGATCCCGA+AGG | 0.612655 | 5.3:-28594447 | MS.gene032908:CDS |
| AAAATATGTCTCCCATGATG+AGG | 0.619381 | 5.3:-28589274 | MS.gene032908:CDS |
| TTAATCTAGGACTAAGACGA+CGG | 0.627654 | 5.3:+28588358 | None:intergenic |
| CTTCTCAGTATATTCAGAAG+GGG | 0.627978 | 5.3:-28590349 | MS.gene032908:CDS |
| TAGATCCTTGTACTCCTGCA+GGG | 0.629301 | 5.3:-28590319 | MS.gene032908:CDS |
| CATTGGTGCTATTACAAAAG+GGG | 0.631356 | 5.3:-28590184 | MS.gene032908:CDS |
| AGATGTGCAACGAGAATTGG+TGG | 0.634622 | 5.3:+28594748 | None:intergenic |
| GCTGGGCAAGAATACTGTGG+AGG | 0.643454 | 5.3:-28589318 | MS.gene032908:CDS |
| CATCCCACCGTCCAAACTAG+GGG | 0.649814 | 5.3:-28590233 | MS.gene032908:CDS |
| GATCCCGAAGGAGAATTGGA+GGG | 0.660632 | 5.3:-28594435 | MS.gene032908:CDS |
| GGCCAAAATGAAGCAAGCTG+TGG | 0.669202 | 5.3:+28591689 | None:intergenic |
| GTTTCCCCTAGTTTGGACGG+TGG | 0.669702 | 5.3:+28590229 | None:intergenic |
| AACCACTTCCGCAAGCTCAG+TGG | 0.669803 | 5.3:-28588396 | MS.gene032908:CDS |
| CGGTACCGGATAATCATCGA+CGG | 0.689344 | 5.3:-28594632 | MS.gene032908:CDS |
| TGGGCAAGAATACTGTGGAG+GGG | 0.700121 | 5.3:-28589316 | MS.gene032908:CDS |
| TACCGGATAATCATCGACGG+TGG | 0.701276 | 5.3:-28594629 | MS.gene032908:CDS |
| ATCTAGGACTAAGACGACGG+AGG | 0.703605 | 5.3:+28588361 | None:intergenic |
| GGATTGATATGGATGATGAG+AGG | 0.704385 | 5.3:-28589188 | MS.gene032908:intron |
| AACTTGGACAGATAAGCCTG+TGG | 0.706967 | 5.3:+28589348 | None:intergenic |
| ACTGCTGGGCAAGAATACTG+TGG | 0.707262 | 5.3:-28589321 | MS.gene032908:CDS |
| TGTGCAACGAGAATTGGTGG+TGG | 0.718647 | 5.3:+28594751 | None:intergenic |
| TTGTTGCTAATCATGCTCTG+GGG | 0.748131 | 5.3:-28592425 | MS.gene032908:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTCTAACATATTAAATTAAA+TGG | + | chr5.3:28590365-28590384 | None:intergenic | 10.0% |
| !!! | ATTTAATTTAATATGTTAGA+AGG | - | chr5.3:28590364-28590383 | MS.gene032908:intron | 10.0% |
| !!! | ATTTTTTAATTAAGATAACA+AGG | - | chr5.3:28589539-28589558 | MS.gene032908:intron | 10.0% |
| !!! | TTTTTTAATTAAGATAACAA+GGG | - | chr5.3:28589540-28589559 | MS.gene032908:intron | 10.0% |
| !! | ATCTTAAAAGAAAAATAAGT+GGG | + | chr5.3:28594012-28594031 | None:intergenic | 15.0% |
| !! | ATGAACTTATTTATAATAGT+AGG | + | chr5.3:28591162-28591181 | None:intergenic | 15.0% |
| !! | CAAACAATAAAAAAGTAATT+TGG | + | chr5.3:28590889-28590908 | None:intergenic | 15.0% |
| !! | GAGAAATAAAAGATTAAAAA+AGG | - | chr5.3:28594372-28594391 | MS.gene032908:CDS | 15.0% |
| !! | TATCTTAAAAGAAAAATAAG+TGG | + | chr5.3:28594013-28594032 | None:intergenic | 15.0% |
| !! | TGATAACATAACATTAAATA+TGG | + | chr5.3:28593542-28593561 | None:intergenic | 15.0% |
| !! | TGTTTATAAAATACTTCATT+CGG | - | chr5.3:28589853-28589872 | MS.gene032908:intron | 15.0% |
| !!! | AAAAGGTTAATAGTTTTTAT+TGG | - | chr5.3:28591846-28591865 | MS.gene032908:intron | 15.0% |
| !!! | ATTTTCATATATGGTTATTT+AGG | - | chr5.3:28591074-28591093 | MS.gene032908:intron | 15.0% |
| !!! | TATAAGAAAAAAAGTACTAT+TGG | + | chr5.3:28590153-28590172 | None:intergenic | 15.0% |
| !!! | TTGATTAAATTTTTAGTGTT+TGG | - | chr5.3:28589461-28589480 | MS.gene032908:intron | 15.0% |
| !!! | TTGTTTGTTTGTTTTTTATA+TGG | - | chr5.3:28588925-28588944 | MS.gene032908:intron | 15.0% |
| !!! | TTTGTTTTTTATATGGATTA+TGG | - | chr5.3:28588932-28588951 | MS.gene032908:intron | 15.0% |
| !!! | TTTTTATACATAATTGTTCA+CGG | - | chr5.3:28590938-28590957 | MS.gene032908:intron | 15.0% |
| !! | AACATAAAACAGGTAAATTT+AGG | + | chr5.3:28589370-28589389 | None:intergenic | 20.0% |
| !! | AATAGATTTAAGAATTAGGA+AGG | - | chr5.3:28591212-28591231 | MS.gene032908:intron | 20.0% |
| !! | AATTAATATTCTCATGAAAC+TGG | - | chr5.3:28593579-28593598 | MS.gene032908:intron | 20.0% |
| !! | ACAAGTTAAATCAAAAGTTA+AGG | + | chr5.3:28590675-28590694 | None:intergenic | 20.0% |
| !! | AGAGCTAAAATATTCTATAA+CGG | - | chr5.3:28589663-28589682 | MS.gene032908:intron | 20.0% |
| !! | AGTACTATCTTTCTTTATAT+TGG | - | chr5.3:28592576-28592595 | MS.gene032908:intron | 20.0% |
| !! | AGTTATTTGTATTTCTTCTT+GGG | - | chr5.3:28591116-28591135 | MS.gene032908:intron | 20.0% |
| !! | ATACAAAATGAAAAATGCTT+TGG | - | chr5.3:28588594-28588613 | MS.gene032908:intron | 20.0% |
| !! | CTAAATGTATATTAATTGAG+TGG | - | chr5.3:28590066-28590085 | MS.gene032908:intron | 20.0% |
| !! | GGAAAATAGATTTAAGAATT+AGG | - | chr5.3:28591208-28591227 | MS.gene032908:intron | 20.0% |
| !! | TTTCATGTTAGTTAATAAGT+GGG | - | chr5.3:28591648-28591667 | MS.gene032908:intron | 20.0% |
| !!! | AAACTATTAACCTTTTGATA+TGG | + | chr5.3:28591842-28591861 | None:intergenic | 20.0% |
| !!! | AACTATTAACCTTTTGATAT+GGG | + | chr5.3:28591841-28591860 | None:intergenic | 20.0% |
| !!! | ATACATCAAACAACAATTTT+AGG | - | chr5.3:28594185-28594204 | MS.gene032908:intron | 20.0% |
| !!! | GTATTGTTCTATTTGATTTA+TGG | - | chr5.3:28592086-28592105 | MS.gene032908:intron | 20.0% |
| !!! | GTTTGTATATACTGATTTAA+CGG | - | chr5.3:28591559-28591578 | MS.gene032908:intron | 20.0% |
| !!! | TACATCAAACAACAATTTTA+GGG | - | chr5.3:28594186-28594205 | MS.gene032908:intron | 20.0% |
| !!! | TATTAATTGAGTGGTATTTT+AGG | - | chr5.3:28590075-28590094 | MS.gene032908:intron | 20.0% |
| !!! | TCATGAGAATATTAATTTGA+CGG | + | chr5.3:28593576-28593595 | None:intergenic | 20.0% |
| !!! | TCGAAAATTTCATTTTAGTT+AGG | - | chr5.3:28590862-28590881 | MS.gene032908:intron | 20.0% |
| !!! | TTCTGAATTACTCTTATTTT+AGG | - | chr5.3:28591376-28591395 | MS.gene032908:intron | 20.0% |
| !!! | TTGAAAATTCCATTTTAGTT+AGG | - | chr5.3:28590906-28590925 | MS.gene032908:intron | 20.0% |
| !!! | TTTTAGTCATATGAGTTTAT+AGG | - | chr5.3:28589702-28589721 | MS.gene032908:intron | 20.0% |
| !!! | TTTTCATGTTAGTTAATAAG+TGG | - | chr5.3:28591647-28591666 | MS.gene032908:intron | 20.0% |
| ! | AAAAGAAATAACCAACGTTA+AGG | + | chr5.3:28593075-28593094 | None:intergenic | 25.0% |
| ! | AAAAGAGATTAATAATCACC+AGG | + | chr5.3:28591505-28591524 | None:intergenic | 25.0% |
| ! | AAAGAAATAACCAACGTTAA+GGG | + | chr5.3:28593074-28593093 | None:intergenic | 25.0% |
| ! | AAATTTCTTTCACACATCAA+AGG | - | chr5.3:28593227-28593246 | MS.gene032908:intron | 25.0% |
| ! | ACATTAAATATGGTGAAGTT+TGG | + | chr5.3:28593532-28593551 | None:intergenic | 25.0% |
| ! | AGGGAAACAATTCAATTAAA+AGG | + | chr5.3:28593055-28593074 | None:intergenic | 25.0% |
| ! | ATCCAAGTAATTTCTTTGTT+TGG | - | chr5.3:28589390-28589409 | MS.gene032908:intron | 25.0% |
| ! | ATTTATGTTTAGGGATGATT+GGG | - | chr5.3:28588861-28588880 | MS.gene032908:intron | 25.0% |
| ! | CAGTTATTTGTATTTCTTCT+TGG | - | chr5.3:28591115-28591134 | MS.gene032908:intron | 25.0% |
| ! | CATATAACAATGTTAACTAG+GGG | + | chr5.3:28592447-28592466 | None:intergenic | 25.0% |
| ! | GAACATTACTGTTGAAATTT+GGG | + | chr5.3:28591783-28591802 | None:intergenic | 25.0% |
| ! | GCATATAACAATGTTAACTA+GGG | + | chr5.3:28592448-28592467 | None:intergenic | 25.0% |
| ! | GGGAAACAATTCAATTAAAA+GGG | + | chr5.3:28593054-28593073 | None:intergenic | 25.0% |
| ! | TAAAGAAATACTAGAGTTTG+TGG | + | chr5.3:28593391-28593410 | None:intergenic | 25.0% |
| ! | TAACGACTAATTACAAACAT+TGG | + | chr5.3:28592336-28592355 | None:intergenic | 25.0% |
| ! | TAATTTGGACCTAACTAAAA+TGG | + | chr5.3:28590874-28590893 | None:intergenic | 25.0% |
| ! | TACCAAACAAAGAAATTACT+TGG | + | chr5.3:28589395-28589414 | None:intergenic | 25.0% |
| ! | TATATTTGCATAAGATCCAA+TGG | - | chr5.3:28590442-28590461 | MS.gene032908:intron | 25.0% |
| ! | TCTAGTATTTCTTTAACAAC+TGG | - | chr5.3:28593396-28593415 | MS.gene032908:intron | 25.0% |
| ! | TGAACATTACTGTTGAAATT+TGG | + | chr5.3:28591784-28591803 | None:intergenic | 25.0% |
| ! | TGACTTCAAAAATCATGAAA+GGG | + | chr5.3:28592541-28592560 | None:intergenic | 25.0% |
| ! | TTACTTGGATAACATAAAAC+AGG | + | chr5.3:28589380-28589399 | None:intergenic | 25.0% |
| ! | TTATAAGCTATAAGCAAATC+AGG | + | chr5.3:28588983-28589002 | None:intergenic | 25.0% |
| ! | TTCATGTTAGTTAATAAGTG+GGG | - | chr5.3:28591649-28591668 | MS.gene032908:intron | 25.0% |
| ! | TTGACTTCAAAAATCATGAA+AGG | + | chr5.3:28592542-28592561 | None:intergenic | 25.0% |
| ! | TTGTGTTGAGTATATTCTTA+AGG | - | chr5.3:28591525-28591544 | MS.gene032908:intron | 25.0% |
| ! | TTTATCCAGAATAACCTTAA+GGG | + | chr5.3:28592210-28592229 | None:intergenic | 25.0% |
| !! | AAATTCTTTTGTCATGTGAA+AGG | + | chr5.3:28591358-28591377 | None:intergenic | 25.0% |
| !! | AGGTAAATTTAGGTTATGTT+TGG | + | chr5.3:28589360-28589379 | None:intergenic | 25.0% |
| !! | GACAAATGAAAAGCATAAAT+GGG | + | chr5.3:28592709-28592728 | None:intergenic | 25.0% |
| !! | TGACAAATGAAAAGCATAAA+TGG | + | chr5.3:28592710-28592729 | None:intergenic | 25.0% |
| !! | TTACTTTATTGTGGTTTTTC+AGG | - | chr5.3:28590696-28590715 | MS.gene032908:intron | 25.0% |
| !! | TTCTTATATTTGAGACAAGA+GGG | - | chr5.3:28590165-28590184 | MS.gene032908:intron | 25.0% |
| !! | TTTCTTATATTTGAGACAAG+AGG | - | chr5.3:28590164-28590183 | MS.gene032908:intron | 25.0% |
| !! | TTTTATCCAGAATAACCTTA+AGG | + | chr5.3:28592211-28592230 | None:intergenic | 25.0% |
| !! | TTTTGTGCTTTATGGTTTAT+TGG | - | chr5.3:28593254-28593273 | MS.gene032908:intron | 25.0% |
| !!! | ACTTAAACTTTTTTGTTTCG+AGG | + | chr5.3:28589949-28589968 | None:intergenic | 25.0% |
| !!! | AGAATTTTTCAAAGTGTGTA+GGG | - | chr5.3:28592270-28592289 | MS.gene032908:intron | 25.0% |
| !!! | ATGAAAAATGCTTTGGATTT+TGG | - | chr5.3:28588601-28588620 | MS.gene032908:intron | 25.0% |
| !!! | ATTCTATAACGGATATGAAA+TGG | - | chr5.3:28589674-28589693 | MS.gene032908:intron | 25.0% |
| !!! | ATTGTTGTTTGATGTATGAA+TGG | + | chr5.3:28594182-28594201 | None:intergenic | 25.0% |
| !!! | ATTTGCTTTGAAATTACAGA+GGG | - | chr5.3:28591266-28591285 | MS.gene032908:intron | 25.0% |
| !!! | ATTTGGAGTTTTTTTGTTGT+TGG | + | chr5.3:28588370-28588389 | None:intergenic | 25.0% |
| !!! | CAGTCAGTTATTTTCATATA+TGG | - | chr5.3:28591065-28591084 | MS.gene032908:intron | 25.0% |
| !!! | CTTAAACTTTTTTGTTTCGA+GGG | + | chr5.3:28589948-28589967 | None:intergenic | 25.0% |
| !!! | TAAAATGCTATTTTCCCTTA+AGG | - | chr5.3:28592193-28592212 | MS.gene032908:intron | 25.0% |
| !!! | TAACTTGTGTTACTTTATTG+TGG | - | chr5.3:28590687-28590706 | MS.gene032908:intron | 25.0% |
| !!! | TAGAATTTTTCAAAGTGTGT+AGG | - | chr5.3:28592269-28592288 | MS.gene032908:intron | 25.0% |
| !!! | TGAAAAATGCTTTGGATTTT+GGG | - | chr5.3:28588602-28588621 | MS.gene032908:intron | 25.0% |
| !!! | TTCTATAACGGATATGAAAT+GGG | - | chr5.3:28589675-28589694 | MS.gene032908:intron | 25.0% |
| !!! | TTGGTTTTGATTATTGAAGA+AGG | - | chr5.3:28590333-28590352 | MS.gene032908:CDS | 25.0% |
| !!! | TTGTTGTTTGATGTATGAAT+GGG | + | chr5.3:28594181-28594200 | None:intergenic | 25.0% |
| !!! | TTTGAGATGTTTTGTTGAAT+TGG | - | chr5.3:28589798-28589817 | MS.gene032908:intron | 25.0% |
| !!! | TTTTTGAAGAAGCTTAAAGT+TGG | - | chr5.3:28593105-28593124 | MS.gene032908:intron | 25.0% |
| AAGCAAAAACGAGTTATGTT+TGG | - | chr5.3:28593484-28593503 | MS.gene032908:intron | 30.0% | |
| AAGTAAATCTTCCTCATCAT+GGG | + | chr5.3:28593910-28593929 | None:intergenic | 30.0% | |
| AATTTACCAATGTTGTTCCA+CGG | - | chr5.3:28591594-28591613 | MS.gene032908:intron | 30.0% | |
| ACACTGTAGGTTAAATTTGT+TGG | - | chr5.3:28594606-28594625 | MS.gene032908:CDS | 30.0% | |
| ACATCACCAAATAATCAATC+AGG | + | chr5.3:28593777-28593796 | None:intergenic | 30.0% | |
| ACTTATAGACTTGAAATGAC+AGG | + | chr5.3:28589131-28589150 | None:intergenic | 30.0% | |
| AGAGTAGTAATTGAGTCTAA+AGG | + | chr5.3:28592066-28592085 | None:intergenic | 30.0% | |
| AGAGTTTGAGAAAAGAGAAA+GGG | - | chr5.3:28594347-28594366 | MS.gene032908:CDS | 30.0% | |
| AGCTATCTTATACCTTATAG+AGG | + | chr5.3:28589205-28589224 | None:intergenic | 30.0% | |
| ATAAGAACTGTTAGAATGCT+TGG | + | chr5.3:28592240-28592259 | None:intergenic | 30.0% | |
| ATAATCAAAACCAACACTGT+TGG | + | chr5.3:28590327-28590346 | None:intergenic | 30.0% | |
| ATATACATGATCTCTTCAGA+TGG | - | chr5.3:28592757-28592776 | MS.gene032908:intron | 30.0% | |
| ATATCAGGAGATTCTAACTT+GGG | - | chr5.3:28592014-28592033 | MS.gene032908:intron | 30.0% | |
| CAAAAGTCAAAGTTCTACAA+AGG | + | chr5.3:28592470-28592489 | None:intergenic | 30.0% | |
| CAACTCTACTAATGTTAGTT+TGG | + | chr5.3:28589759-28589778 | None:intergenic | 30.0% | |
| CAGATTCCTGATTGATTATT+TGG | - | chr5.3:28593768-28593787 | MS.gene032908:intron | 30.0% | |
| CATGAAAACAAATGTTTCAC+AGG | + | chr5.3:28591635-28591654 | None:intergenic | 30.0% | |
| CATGACAAAAAAAGACTCTT+TGG | - | chr5.3:28589006-28589025 | MS.gene032908:intron | 30.0% | |
| CTGAACATGTGTTTATAAGT+GGG | - | chr5.3:28591713-28591732 | MS.gene032908:CDS | 30.0% | |
| CTGAATGTTCAATGCTAATA+AGG | + | chr5.3:28594157-28594176 | None:intergenic | 30.0% | |
| CTTCAGATGGTAAAATGATT+TGG | - | chr5.3:28592770-28592789 | MS.gene032908:intron | 30.0% | |
| GATTTATGTTTAGGGATGAT+TGG | - | chr5.3:28588860-28588879 | MS.gene032908:intron | 30.0% | |
| GGCATATAACAATGTTAACT+AGG | + | chr5.3:28592449-28592468 | None:intergenic | 30.0% | |
| GTCATAGTGTCTACATTTAT+TGG | - | chr5.3:28590638-28590657 | MS.gene032908:intron | 30.0% | |
| GTTATGTTTGGCAAAAATAG+CGG | + | chr5.3:28589348-28589367 | None:intergenic | 30.0% | |
| GTTCATTCAATCATAACTGT+CGG | - | chr5.3:28591176-28591195 | MS.gene032908:CDS | 30.0% | |
| TACAATAACTTCCTGAAGTT+TGG | - | chr5.3:28594214-28594233 | MS.gene032908:intron | 30.0% | |
| TAGAGAATGATCCACTTATT+GGG | - | chr5.3:28590994-28591013 | MS.gene032908:intron | 30.0% | |
| TATATCAGGAGATTCTAACT+TGG | - | chr5.3:28592013-28592032 | MS.gene032908:intron | 30.0% | |
| TCTCACGCACTATTAAATTT+GGG | - | chr5.3:28591435-28591454 | MS.gene032908:intron | 30.0% | |
| TGAACATGTGTTTATAAGTG+GGG | - | chr5.3:28591714-28591733 | MS.gene032908:CDS | 30.0% | |
| TGGATCATTCTCTAAATCAT+AGG | + | chr5.3:28590988-28591007 | None:intergenic | 30.0% | |
| TTAGAGAATGATCCACTTAT+TGG | - | chr5.3:28590993-28591012 | MS.gene032908:intron | 30.0% | |
| TTCAATTGACTAGAGAGAAT+AGG | + | chr5.3:28594440-28594459 | None:intergenic | 30.0% | |
| TTCATTCAATCATAACTGTC+GGG | - | chr5.3:28591177-28591196 | MS.gene032908:CDS | 30.0% | |
| TTCTCACGCACTATTAAATT+TGG | - | chr5.3:28591434-28591453 | MS.gene032908:intron | 30.0% | |
| ! | AACTTTTATACCTAAGCTTC+AGG | - | chr5.3:28593185-28593204 | MS.gene032908:intron | 30.0% |
| ! | AAGGTTCTTTTTGTGCTTTA+TGG | - | chr5.3:28593246-28593265 | MS.gene032908:intron | 30.0% |
| ! | ACTTTTATACCTAAGCTTCA+GGG | - | chr5.3:28593186-28593205 | MS.gene032908:intron | 30.0% |
| ! | ATTAGTAGAGTTGAGCTTTT+CGG | - | chr5.3:28589766-28589785 | MS.gene032908:intron | 30.0% |
| ! | ATTTTCCCTTAAGGTTATTC+TGG | - | chr5.3:28592202-28592221 | MS.gene032908:intron | 30.0% |
| ! | CATTTGTCAATCTTTTCACT+TGG | - | chr5.3:28592721-28592740 | MS.gene032908:intron | 30.0% |
| ! | CTTTTGCTTATATTTGAGTC+CGG | - | chr5.3:28593728-28593747 | MS.gene032908:intron | 30.0% |
| ! | GCTTTGTTAATTTACTTGAC+TGG | - | chr5.3:28590228-28590247 | MS.gene032908:CDS | 30.0% |
| ! | GGTTTCTGGATTTATGTTTA+GGG | - | chr5.3:28588852-28588871 | MS.gene032908:intron | 30.0% |
| ! | TGAAGTTCAAGAGAAGATTT+TGG | - | chr5.3:28588807-28588826 | MS.gene032908:intron | 30.0% |
| ! | TTAGTCTAAAGTAGATGCAT+TGG | - | chr5.3:28593349-28593368 | MS.gene032908:intron | 30.0% |
| ! | TTTTTCTTCCAACCATAGTT+TGG | - | chr5.3:28590554-28590573 | MS.gene032908:intron | 30.0% |
| !! | AAATTTGTTGGTTTCTTGGA+CGG | - | chr5.3:28594618-28594637 | MS.gene032908:CDS | 30.0% |
| !! | AATAGGTAAGAGGGTTTTAT+AGG | + | chr5.3:28594423-28594442 | None:intergenic | 30.0% |
| !! | ACTCTTATAATGTTGATTCC+TGG | - | chr5.3:28592875-28592894 | MS.gene032908:intron | 30.0% |
| !! | AGATGTTTTGTTGAATTGGA+AGG | - | chr5.3:28589802-28589821 | MS.gene032908:intron | 30.0% |
| !! | CATTTGCTTTGAAATTACAG+AGG | - | chr5.3:28591265-28591284 | MS.gene032908:intron | 30.0% |
| !! | GAATTTTTCAAAGTGTGTAG+GGG | - | chr5.3:28592271-28592290 | MS.gene032908:intron | 30.0% |
| !! | GGTTAAATTTGTTGGTTTCT+TGG | - | chr5.3:28594614-28594633 | MS.gene032908:CDS | 30.0% |
| !! | TTTGCTTTGAAATTACAGAG+GGG | - | chr5.3:28591267-28591286 | MS.gene032908:intron | 30.0% |
| !!! | CAAAGAGTCTTTTTTTGTCA+TGG | + | chr5.3:28589008-28589027 | None:intergenic | 30.0% |
| AAAAATTTCCCCTGAAGCTT+AGG | + | chr5.3:28593198-28593217 | None:intergenic | 35.0% | |
| AAAATATGTCTCCCATGATG+AGG | - | chr5.3:28593896-28593915 | MS.gene032908:intron | 35.0% | |
| AACAAGAGAAAGGTGATGAA+CGG | - | chr5.3:28594464-28594483 | MS.gene032908:CDS | 35.0% | |
| ACTACTGGGATTATTGAACT+TGG | - | chr5.3:28590792-28590811 | MS.gene032908:intron | 35.0% | |
| ACTAGAGAGAATAGGTAAGA+GGG | + | chr5.3:28594432-28594451 | None:intergenic | 35.0% | |
| AGCCACTTGAATTAGGTTAT+CGG | - | chr5.3:28589600-28589619 | MS.gene032908:intron | 35.0% | |
| AGCTATAAGCCACTTGAATT+AGG | - | chr5.3:28589593-28589612 | MS.gene032908:intron | 35.0% | |
| AGCTTCTCAGTATATTCAGA+AGG | - | chr5.3:28592819-28592838 | MS.gene032908:intron | 35.0% | |
| AGTGCAGAAATAGATAGTCT+TGG | - | chr5.3:28594046-28594065 | MS.gene032908:intron | 35.0% | |
| ATATCATGCTACACACATGT+TGG | + | chr5.3:28590303-28590322 | None:intergenic | 35.0% | |
| ATATTTGAATGCGTACAGTG+CGG | - | chr5.3:28594116-28594135 | MS.gene032908:intron | 35.0% | |
| ATCCTACTACCCATATCAAA+AGG | - | chr5.3:28591829-28591848 | MS.gene032908:intron | 35.0% | |
| ATGACAAACCAAACTATGGT+TGG | + | chr5.3:28590565-28590584 | None:intergenic | 35.0% | |
| ATTGAAACCCAACAAGAGAA+AGG | - | chr5.3:28594454-28594473 | MS.gene032908:CDS | 35.0% | |
| ATTTACCAATGTTGTTCCAC+GGG | - | chr5.3:28591595-28591614 | MS.gene032908:intron | 35.0% | |
| CCACTTATAAACACATGTTC+AGG | + | chr5.3:28591715-28591734 | None:intergenic | 35.0% | |
| CCTGAACATGTGTTTATAAG+TGG | - | chr5.3:28591712-28591731 | MS.gene032908:CDS | 35.0% | |
| CTAACTCATCCTCACAAAAT+CGG | + | chr5.3:28591759-28591778 | None:intergenic | 35.0% | |
| CTTCTCAGTATATTCAGAAG+GGG | - | chr5.3:28592821-28592840 | MS.gene032908:intron | 35.0% | |
| GAACATGTGTTTATAAGTGG+GGG | - | chr5.3:28591715-28591734 | MS.gene032908:CDS | 35.0% | |
| GAAGTAAATCTTCCTCATCA+TGG | + | chr5.3:28593911-28593930 | None:intergenic | 35.0% | |
| GAGAGTTTGAGAAAAGAGAA+AGG | - | chr5.3:28594346-28594365 | MS.gene032908:CDS | 35.0% | |
| GAGTTTGAGAAAAGAGAAAG+GGG | - | chr5.3:28594348-28594367 | MS.gene032908:CDS | 35.0% | |
| GCTTCTCAGTATATTCAGAA+GGG | - | chr5.3:28592820-28592839 | MS.gene032908:intron | 35.0% | |
| GCTTGAAAACAGAAAAAGAC+AGG | + | chr5.3:28592112-28592131 | None:intergenic | 35.0% | |
| GTCATACATCCGACAAAATA+TGG | - | chr5.3:28591689-28591708 | MS.gene032908:CDS | 35.0% | |
| GTGCAGAAATAGATAGTCTT+GGG | - | chr5.3:28594047-28594066 | MS.gene032908:intron | 35.0% | |
| GTTAGAAGGAAGAATGTGAA+AGG | - | chr5.3:28590378-28590397 | MS.gene032908:intron | 35.0% | |
| TATTACAAGTCCATTCTAGC+TGG | - | chr5.3:28592509-28592528 | MS.gene032908:intron | 35.0% | |
| TGAATTGTTTCCCTTAACGT+TGG | - | chr5.3:28593061-28593080 | MS.gene032908:intron | 35.0% | |
| TGATATGGGTAGTAGGATAT+AGG | + | chr5.3:28591827-28591846 | None:intergenic | 35.0% | |
| TGATTTGAGCTAAGGGATAA+AGG | + | chr5.3:28592408-28592427 | None:intergenic | 35.0% | |
| TGTTAGTTAATAAGTGGGGA+TGG | - | chr5.3:28591653-28591672 | MS.gene032908:intron | 35.0% | |
| TTAATAGTGCGTGAGAACAA+AGG | + | chr5.3:28591431-28591450 | None:intergenic | 35.0% | |
| TTCATCACCTTTCTCTTGTT+GGG | + | chr5.3:28594464-28594483 | None:intergenic | 35.0% | |
| TTCCGATAACCTAATTCAAG+TGG | + | chr5.3:28589605-28589624 | None:intergenic | 35.0% | |
| TTTGTCATGTGAAAGGAAAC+TGG | + | chr5.3:28591351-28591370 | None:intergenic | 35.0% | |
| ! | AACCTTTTGATATGGGTAGT+AGG | + | chr5.3:28591834-28591853 | None:intergenic | 35.0% |
| ! | AATACGACAAGTTGACAACT+AGG | + | chr5.3:28590514-28590533 | None:intergenic | 35.0% |
| ! | AATTTCAATGCTGCCATTTC+AGG | + | chr5.3:28594751-28594770 | None:intergenic | 35.0% |
| ! | AGAAGAGTTTGGTTTCTATG+AGG | - | chr5.3:28588626-28588645 | MS.gene032908:intron | 35.0% |
| ! | AGATAGTCTTGGGATTGATA+TGG | - | chr5.3:28594057-28594076 | MS.gene032908:intron | 35.0% |
| ! | ATGTTCAGGCCATATTTTGT+CGG | + | chr5.3:28591701-28591720 | None:intergenic | 35.0% |
| ! | CAGCTAGTTTATCCTCTATA+AGG | - | chr5.3:28589190-28589209 | MS.gene032908:CDS | 35.0% |
| ! | CTTTTATACCTAAGCTTCAG+GGG | - | chr5.3:28593187-28593206 | MS.gene032908:intron | 35.0% |
| ! | GAAATGGCAGCATTGAAATT+TGG | - | chr5.3:28594751-28594770 | MS.gene032908:CDS | 35.0% |
| ! | GAAGAGTTTGGTTTCTATGA+GGG | - | chr5.3:28588627-28588646 | MS.gene032908:intron | 35.0% |
| ! | GGGTTTCTGGATTTATGTTT+AGG | - | chr5.3:28588851-28588870 | MS.gene032908:intron | 35.0% |
| ! | TAAGCTTCAGGGGAAATTTT+TGG | - | chr5.3:28593197-28593216 | MS.gene032908:intron | 35.0% |
| ! | TCTGATAAGCTAGCTTATAG+AGG | - | chr5.3:28589429-28589448 | MS.gene032908:intron | 35.0% |
| ! | TGAAAAGCATAAATGGGACA+TGG | + | chr5.3:28592703-28592722 | None:intergenic | 35.0% |
| ! | TTAATCTAGGACTAAGACGA+CGG | + | chr5.3:28594815-28594834 | None:intergenic | 35.0% |
| ! | TTAGTAGAGTTGAGCTTTTC+GGG | - | chr5.3:28589767-28589786 | MS.gene032908:intron | 35.0% |
| ! | TTATTGGGAAGTGTGATGTT+AGG | - | chr5.3:28591009-28591028 | MS.gene032908:intron | 35.0% |
| ! | TTGTCAATCTTTTCACTTGG+AGG | - | chr5.3:28592724-28592743 | MS.gene032908:intron | 35.0% |
| !! | AATTTGTTGGTTTCTTGGAC+GGG | - | chr5.3:28594619-28594638 | MS.gene032908:CDS | 35.0% |
| !! | AGCATTGGTGCTATTACAAA+AGG | - | chr5.3:28592984-28593003 | MS.gene032908:intron | 35.0% |
| !! | AGTCTTGTAGGAAGGTTTTA+AGG | - | chr5.3:28588830-28588849 | MS.gene032908:intron | 35.0% |
| !! | ATTGCTGACTCCAAGAAAAT+GGG | + | chr5.3:28590589-28590608 | None:intergenic | 35.0% |
| !! | CATTGGTGCTATTACAAAAG+GGG | - | chr5.3:28592986-28593005 | MS.gene032908:intron | 35.0% |
| !! | GACTTGGTGTTTATGAAATG+AGG | - | chr5.3:28590206-28590225 | MS.gene032908:CDS | 35.0% |
| !! | GCATTGGTGCTATTACAAAA+GGG | - | chr5.3:28592985-28593004 | MS.gene032908:intron | 35.0% |
| !! | GTCTTGTAGGAAGGTTTTAA+GGG | - | chr5.3:28588831-28588850 | MS.gene032908:intron | 35.0% |
| !! | GTTATAACAGGTTCGGTTTT+TGG | - | chr5.3:28588889-28588908 | MS.gene032908:intron | 35.0% |
| !! | TAACTGTATTGTTGGTGACT+TGG | - | chr5.3:28590190-28590209 | MS.gene032908:CDS | 35.0% |
| !! | TTAGAAAGTATCAAACACCG+TGG | + | chr5.3:28591943-28591962 | None:intergenic | 35.0% |
| !!! | AGAAGATTTTGGAGTCTTGT+AGG | - | chr5.3:28588818-28588837 | MS.gene032908:intron | 35.0% |
| !!! | CGGTTTTACTTTTGCTGTTT+TGG | - | chr5.3:28593432-28593451 | MS.gene032908:intron | 35.0% |
| !!! | CTGTGTTAGTTTTTCGGATT+GGG | - | chr5.3:28593798-28593817 | MS.gene032908:intron | 35.0% |
| !!! | CTTTTTTCACTTAGTGAGCT+AGG | + | chr5.3:28592910-28592929 | None:intergenic | 35.0% |
| !!! | GATGTGCTGTGTTAGTTTTT+CGG | - | chr5.3:28593792-28593811 | MS.gene032908:intron | 35.0% |
| !!! | TAGTTTTTTCCTCTTTCGTC+CGG | - | chr5.3:28592359-28592378 | MS.gene032908:intron | 35.0% |
| !!! | TGTGTTAGTTTTTCGGATTG+GGG | - | chr5.3:28593799-28593818 | MS.gene032908:intron | 35.0% |
| AAAGTTTCCCCTAGTTTGGA+CGG | + | chr5.3:28592947-28592966 | None:intergenic | 40.0% | |
| AATGGTGAAAGAGATGCTTG+TGG | - | chr5.3:28590460-28590479 | MS.gene032908:intron | 40.0% | |
| ACAAAGTGGTAGAGAGAACT+AGG | - | chr5.3:28594318-28594337 | MS.gene032908:CDS | 40.0% | |
| ACAAGCATCTCTTTCACCAT+TGG | + | chr5.3:28590461-28590480 | None:intergenic | 40.0% | |
| ACATCACACTTCCCAATAAG+TGG | + | chr5.3:28591008-28591027 | None:intergenic | 40.0% | |
| ACTGGGATTATTGAACTTGG+TGG | - | chr5.3:28590795-28590814 | MS.gene032908:intron | 40.0% | |
| AGAATGTTGCTCATGACTCA+TGG | - | chr5.3:28591979-28591998 | MS.gene032908:intron | 40.0% | |
| AGAGGGAGTAACTGTATTGT+TGG | - | chr5.3:28590182-28590201 | MS.gene032908:CDS | 40.0% | |
| AGATGCTTGTGGATATCTCA+AGG | - | chr5.3:28590471-28590490 | MS.gene032908:intron | 40.0% | |
| AGGGAAAAAACCAGCTAGAA+TGG | + | chr5.3:28592522-28592541 | None:intergenic | 40.0% | |
| AGTTTGGCAAGACACAACTT+TGG | + | chr5.3:28589743-28589762 | None:intergenic | 40.0% | |
| ATAATCCCAGTAGTCTCTGA+AGG | + | chr5.3:28590786-28590805 | None:intergenic | 40.0% | |
| ATGCATTGTTAGCACTCTGA+AGG | - | chr5.3:28591240-28591259 | MS.gene032908:intron | 40.0% | |
| ATTCAATCATAACTGTCGGG+AGG | - | chr5.3:28591180-28591199 | MS.gene032908:CDS | 40.0% | |
| ATTTCTTCTTGGGAGCAGTT+AGG | - | chr5.3:28591126-28591145 | MS.gene032908:intron | 40.0% | |
| CATCGCTTCTCTTGATACAA+AGG | + | chr5.3:28591405-28591424 | None:intergenic | 40.0% | |
| GAAAGATGTGCAACGAGAAT+TGG | + | chr5.3:28588428-28588447 | None:intergenic | 40.0% | |
| GACTAGAGAGAATAGGTAAG+AGG | + | chr5.3:28594433-28594452 | None:intergenic | 40.0% | |
| GAGAGAAGAGATTTGTGGAA+CGG | + | chr5.3:28588393-28588412 | None:intergenic | 40.0% | |
| GATTCTCTTCACGAGTCATA+TGG | - | chr5.3:28591887-28591906 | MS.gene032908:intron | 40.0% | |
| GATTGGGCTTCTGTTATAAC+AGG | - | chr5.3:28588877-28588896 | MS.gene032908:intron | 40.0% | |
| GCATGATATACCAACAGTGT+TGG | - | chr5.3:28590314-28590333 | MS.gene032908:CDS | 40.0% | |
| GGATTGATATGGATGATGAG+AGG | - | chr5.3:28593982-28594001 | MS.gene032908:intron | 40.0% | |
| GGCTTCTGTTATAACAGGTT+CGG | - | chr5.3:28588882-28588901 | MS.gene032908:intron | 40.0% | |
| GGTTTGTAATTTCTTTCCCG+TGG | + | chr5.3:28591614-28591633 | None:intergenic | 40.0% | |
| GTGTAGTTTCACCAAACTTC+AGG | + | chr5.3:28594228-28594247 | None:intergenic | 40.0% | |
| GTTCATCACCTTTCTCTTGT+TGG | + | chr5.3:28594465-28594484 | None:intergenic | 40.0% | |
| GTTGTTGCTAATCATGCTCT+GGG | - | chr5.3:28590744-28590763 | MS.gene032908:intron | 40.0% | |
| GTTTGGCAAGACACAACTTT+GGG | + | chr5.3:28589742-28589761 | None:intergenic | 40.0% | |
| GTTTGGTTGTGAGAACAAAG+TGG | - | chr5.3:28594304-28594323 | MS.gene032908:CDS | 40.0% | |
| TCACAACCAAACATATCCTG+AGG | + | chr5.3:28594296-28594315 | None:intergenic | 40.0% | |
| TCTTATCAGCATTGCGACAT+AGG | - | chr5.3:28593159-28593178 | MS.gene032908:intron | 40.0% | |
| TGACAGTCTTGGGATTGATA+TGG | - | chr5.3:28593971-28593990 | MS.gene032908:intron | 40.0% | |
| TGTCCAAGTTAATGACTGCT+GGG | - | chr5.3:28593835-28593854 | MS.gene032908:intron | 40.0% | |
| TTGAAGGGTAGAGTAATCCA+TGG | - | chr5.3:28594526-28594545 | MS.gene032908:CDS | 40.0% | |
| TTGTTGCTAATCATGCTCTG+GGG | - | chr5.3:28590745-28590764 | MS.gene032908:intron | 40.0% | |
| ! | ACAATGTTAACTAGGGGTGT+CGG | + | chr5.3:28592441-28592460 | None:intergenic | 40.0% |
| ! | AGAGATTTGTGGAACGGATT+TGG | + | chr5.3:28588387-28588406 | None:intergenic | 40.0% |
| ! | CATTAGCCTCAGGATATGTT+TGG | - | chr5.3:28594287-28594306 | MS.gene032908:intron | 40.0% |
| ! | CCAAACTAGGGGAAACTTTT+CGG | - | chr5.3:28592948-28592967 | MS.gene032908:intron | 40.0% |
| ! | CGATTTTGTGAGGATGAGTT+AGG | - | chr5.3:28591757-28591776 | MS.gene032908:CDS | 40.0% |
| ! | CTAGATGAGCTAACTTGTAG+TGG | + | chr5.3:28589271-28589290 | None:intergenic | 40.0% |
| ! | CTGGTCATGTGTTCTAGATT+TGG | - | chr5.3:28591910-28591929 | MS.gene032908:intron | 40.0% |
| ! | GTGCTATTACAAAAGGGGAA+AGG | - | chr5.3:28592991-28593010 | MS.gene032908:intron | 40.0% |
| ! | GTTTGTCATGCCCATTTTCT+TGG | - | chr5.3:28590576-28590595 | MS.gene032908:intron | 40.0% |
| ! | TGATGAAGGAGTGTATGCTT+GGG | - | chr5.3:28590722-28590741 | MS.gene032908:intron | 40.0% |
| ! | TGGAAGTATGATTCTCATGC+TGG | - | chr5.3:28590248-28590267 | MS.gene032908:CDS | 40.0% |
| !! | ACATTATAAGAGTACCCTGC+AGG | + | chr5.3:28592868-28592887 | None:intergenic | 40.0% |
| !! | AGCTCAACTGATTTGAGCTA+AGG | + | chr5.3:28592416-28592435 | None:intergenic | 40.0% |
| !! | GATTGCTGACTCCAAGAAAA+TGG | + | chr5.3:28590590-28590609 | None:intergenic | 40.0% |
| !! | GCTCAACTGATTTGAGCTAA+GGG | + | chr5.3:28592415-28592434 | None:intergenic | 40.0% |
| !! | GGATTTTGGGAAGAAGAGTT+TGG | - | chr5.3:28588615-28588634 | MS.gene032908:intron | 40.0% |
| !! | TGCAGCTAGCTTTGTTTGAA+GGG | - | chr5.3:28594511-28594530 | MS.gene032908:CDS | 40.0% |
| !! | TTTGTGGCTTGGTGTTACTT+TGG | - | chr5.3:28594725-28594744 | MS.gene032908:CDS | 40.0% |
| !!! | AGGAAGGTTTTAAGGGTTTC+TGG | - | chr5.3:28588838-28588857 | MS.gene032908:intron | 40.0% |
| !!! | AGGTTCGGTTTTTGGCTTAT+GGG | - | chr5.3:28588897-28588916 | MS.gene032908:intron | 40.0% |
| !!! | AGTTTTTTCCTCTTTCGTCC+GGG | - | chr5.3:28592360-28592379 | MS.gene032908:intron | 40.0% |
| !!! | GATTTTGGAGTCTTGTAGGA+AGG | - | chr5.3:28588822-28588841 | MS.gene032908:intron | 40.0% |
| !!! | GCTGTGTTAGTTTTTCGGAT+TGG | - | chr5.3:28593797-28593816 | MS.gene032908:intron | 40.0% |
| !!! | GGTTTTTCAGGTTCTGATGA+AGG | - | chr5.3:28590708-28590727 | MS.gene032908:intron | 40.0% |
| AACTTGGACAGATAAGCCTG+TGG | + | chr5.3:28593825-28593844 | None:intergenic | 45.0% | |
| AAGAATACTGTGGAGGGGAT+TGG | - | chr5.3:28593859-28593878 | MS.gene032908:intron | 45.0% | |
| AGAAAGGTGATGAACGGATG+AGG | - | chr5.3:28594470-28594489 | MS.gene032908:CDS | 45.0% | |
| AGATGTGCAACGAGAATTGG+TGG | + | chr5.3:28588425-28588444 | None:intergenic | 45.0% | |
| AGGAAGGCTATTCAAGCTTG+CGG | - | chr5.3:28594701-28594720 | MS.gene032908:CDS | 45.0% | |
| ATAGATCCTTGTACTCCTGC+AGG | - | chr5.3:28592850-28592869 | MS.gene032908:intron | 45.0% | |
| ATCGTCGTTTGGGAATGATC+CGG | - | chr5.3:28588663-28588682 | MS.gene032908:intron | 45.0% | |
| ATGGGACATGGCACAACTAA+AGG | + | chr5.3:28592691-28592710 | None:intergenic | 45.0% | |
| ATTGGAGGGAAACGGAGATT+CGG | - | chr5.3:28588749-28588768 | MS.gene032908:intron | 45.0% | |
| CCGAAAAGTTTCCCCTAGTT+TGG | + | chr5.3:28592951-28592970 | None:intergenic | 45.0% | |
| CTAAGGGATAAAGGAGTTGG+AGG | + | chr5.3:28592399-28592418 | None:intergenic | 45.0% | |
| CTACAGTGTCACAAGCAAGA+CGG | + | chr5.3:28594595-28594614 | None:intergenic | 45.0% | |
| CTCTGCTTCATGACAGTCTT+GGG | - | chr5.3:28593961-28593980 | MS.gene032908:intron | 45.0% | |
| CTGTCCAAGTTAATGACTGC+TGG | - | chr5.3:28593834-28593853 | MS.gene032908:intron | 45.0% | |
| GAAAGGTGATGAACGGATGA+GGG | - | chr5.3:28594471-28594490 | MS.gene032908:CDS | 45.0% | |
| GAAGAATGTGAAAGGCAGAG+AGG | - | chr5.3:28590386-28590405 | MS.gene032908:intron | 45.0% | |
| GAAGGAGAATTGGAGGGAAA+CGG | - | chr5.3:28588741-28588760 | MS.gene032908:intron | 45.0% | |
| GAAGTGTGATGTTAGGTGTC+AGG | - | chr5.3:28591016-28591035 | MS.gene032908:intron | 45.0% | |
| GAGCTAAGGGATAAAGGAGT+TGG | + | chr5.3:28592402-28592421 | None:intergenic | 45.0% | |
| GGGCATGACAAACCAAACTA+TGG | + | chr5.3:28590569-28590588 | None:intergenic | 45.0% | |
| GGTTGTTGCTAATCATGCTC+TGG | - | chr5.3:28590743-28590762 | MS.gene032908:intron | 45.0% | |
| GTGATCCTTCAGAGACTACT+GGG | - | chr5.3:28590778-28590797 | MS.gene032908:intron | 45.0% | |
| GTTTCCCTCCAATTCTCCTT+CGG | + | chr5.3:28588742-28588761 | None:intergenic | 45.0% | |
| TAGATCCTTGTACTCCTGCA+GGG | - | chr5.3:28592851-28592870 | MS.gene032908:intron | 45.0% | |
| TATACTGAGAAGCTGCACTG+AGG | + | chr5.3:28592813-28592832 | None:intergenic | 45.0% | |
| TATTCAAGCTTGCGGGTTTG+TGG | - | chr5.3:28594709-28594728 | MS.gene032908:CDS | 45.0% | |
| TCTTTCCCGTGGAACAACAT+TGG | + | chr5.3:28591603-28591622 | None:intergenic | 45.0% | |
| TGGTGGAGTTTGCGAAAAGA+CGG | - | chr5.3:28588713-28588732 | MS.gene032908:intron | 45.0% | |
| TGTGCAAATGATGTACTCGC+CGG | + | chr5.3:28593750-28593769 | None:intergenic | 45.0% | |
| TGTGCGAGAGAAGAGATTTG+TGG | + | chr5.3:28588398-28588417 | None:intergenic | 45.0% | |
| TTCACTTAGTGAGCTAGGAG+AGG | + | chr5.3:28592905-28592924 | None:intergenic | 45.0% | |
| TTCCACCGTCGATGATTATC+CGG | + | chr5.3:28588546-28588565 | None:intergenic | 45.0% | |
| TTCCCAAACGACGATAAACC+CGG | + | chr5.3:28588658-28588677 | None:intergenic | 45.0% | |
| TTGCCCAGCAGTCATTAACT+TGG | + | chr5.3:28593841-28593860 | None:intergenic | 45.0% | |
| TTTCCCTCCAATTCTCCTTC+GGG | + | chr5.3:28588741-28588760 | None:intergenic | 45.0% | |
| ! | CTAGATTTGGAACGACACCA+CGG | - | chr5.3:28591923-28591942 | MS.gene032908:intron | 45.0% |
| ! | CTGATGAAGGAGTGTATGCT+TGG | - | chr5.3:28590721-28590740 | MS.gene032908:intron | 45.0% |
| ! | TGGTGAAGCTACGCTTTGTT+TGG | - | chr5.3:28588952-28588971 | MS.gene032908:intron | 45.0% |
| !! | AGCCACAGCTTGCTTCATTT+TGG | - | chr5.3:28591479-28591498 | MS.gene032908:intron | 45.0% |
| !! | CAATGTTAACTAGGGGTGTC+GGG | + | chr5.3:28592440-28592459 | None:intergenic | 45.0% |
| !! | GCTGATTGATTTGCTGTGCT+TGG | + | chr5.3:28589174-28589193 | None:intergenic | 45.0% |
| !! | GGTGTTACTTTGGCCTGAAA+TGG | - | chr5.3:28594735-28594754 | MS.gene032908:CDS | 45.0% |
| !! | GTGCAGCTAGCTTTGTTTGA+AGG | - | chr5.3:28594510-28594529 | MS.gene032908:CDS | 45.0% |
| !! | TGGAGAGAAGCGCTTATATC+AGG | - | chr5.3:28591999-28592018 | MS.gene032908:intron | 45.0% |
| !!! | CAGGTTCGGTTTTTGGCTTA+TGG | - | chr5.3:28588896-28588915 | MS.gene032908:intron | 45.0% |
| !! | AATTATGTATAAAAATAATT+TGG | + | chr5.3:28590933-28590952 | None:intergenic | 5.0% |
| !!! | ATTATTTAATATTTTTTTAG+AGG | + | chr5.3:28592174-28592193 | None:intergenic | 5.0% |
| ACTGCTGGGCAAGAATACTG+TGG | - | chr5.3:28593849-28593868 | MS.gene032908:intron | 50.0% | |
| AGTCCGGGTTTATCGTCGTT+TGG | - | chr5.3:28588652-28588671 | MS.gene032908:intron | 50.0% | |
| AGTTCAAACCCGGACGAAAG+AGG | + | chr5.3:28592371-28592390 | None:intergenic | 50.0% | |
| ATCATCCCACCGTCCAAACT+AGG | - | chr5.3:28592935-28592954 | MS.gene032908:intron | 50.0% | |
| ATTCGGCTTATGGCTACTGC+TGG | - | chr5.3:28588766-28588785 | MS.gene032908:intron | 50.0% | |
| CACCAGACAGGTGCTCTATT+GGG | - | chr5.3:28594675-28594694 | MS.gene032908:CDS | 50.0% | |
| CAGAGACTGCACAACAACCA+TGG | + | chr5.3:28594546-28594565 | None:intergenic | 50.0% | |
| CATAACTGTCGGGAGGATTC+TGG | - | chr5.3:28591187-28591206 | MS.gene032908:CDS | 50.0% | |
| CATGGTTGTTGTGCAGTCTC+TGG | - | chr5.3:28594544-28594563 | MS.gene032908:CDS | 50.0% | |
| CCTTATCGCTTGTACCCATG+CGG | - | chr5.3:28594255-28594274 | MS.gene032908:intron | 50.0% | |
| CGCATGGGTACAAGCGATAA+GGG | + | chr5.3:28594257-28594276 | None:intergenic | 50.0% | |
| CGGAAAAAACTCTCCGGTAC+CGG | - | chr5.3:28588524-28588543 | MS.gene032908:CDS | 50.0% | |
| CGTCGATGATTATCCGGTAC+CGG | + | chr5.3:28588540-28588559 | None:intergenic | 50.0% | |
| CGTCTTGCTTGTGACACTGT+AGG | - | chr5.3:28594593-28594612 | MS.gene032908:CDS | 50.0% | |
| CGTTTGGGAATGATCCGGAT+GGG | - | chr5.3:28588668-28588687 | MS.gene032908:intron | 50.0% | |
| CTCTTCACGAGTCATATGGC+TGG | - | chr5.3:28591891-28591910 | MS.gene032908:intron | 50.0% | |
| CTGGGCAAGAATACTGTGGA+GGG | - | chr5.3:28593853-28593872 | MS.gene032908:intron | 50.0% | |
| GAAGCAAGCTGTGGCTGTAA+AGG | + | chr5.3:28591475-28591494 | None:intergenic | 50.0% | |
| GATCCCGAAGGAGAATTGGA+GGG | - | chr5.3:28588735-28588754 | MS.gene032908:intron | 50.0% | |
| GATGAACGGATGAGGGCTAA+AGG | - | chr5.3:28594478-28594497 | MS.gene032908:CDS | 50.0% | |
| GCTCTGCTTCATGACAGTCT+TGG | - | chr5.3:28593960-28593979 | MS.gene032908:intron | 50.0% | |
| GGAAACGGAGATTCGGCTTA+TGG | - | chr5.3:28588756-28588775 | MS.gene032908:intron | 50.0% | |
| GGAAGGCTATTCAAGCTTGC+GGG | - | chr5.3:28594702-28594721 | MS.gene032908:CDS | 50.0% | |
| GGAGGTCTTGAGTTCAAACC+CGG | + | chr5.3:28592381-28592400 | None:intergenic | 50.0% | |
| GGCCAAAATGAAGCAAGCTG+TGG | + | chr5.3:28591484-28591503 | None:intergenic | 50.0% | |
| GGTGATCCTTCAGAGACTAC+TGG | - | chr5.3:28590777-28590796 | MS.gene032908:intron | 50.0% | |
| GGTTTCTATGAGGGTGAGTC+CGG | - | chr5.3:28588636-28588655 | MS.gene032908:intron | 50.0% | |
| GTCCGGGTTTATCGTCGTTT+GGG | - | chr5.3:28588653-28588672 | MS.gene032908:intron | 50.0% | |
| GTGTGATGTTAGGTGTCAGG+TGG | - | chr5.3:28591019-28591038 | MS.gene032908:intron | 50.0% | |
| GTTTCTATGAGGGTGAGTCC+GGG | - | chr5.3:28588637-28588656 | MS.gene032908:intron | 50.0% | |
| GTTTGGGAATGATCCGGATG+GGG | - | chr5.3:28588669-28588688 | MS.gene032908:intron | 50.0% | |
| TAATGTATCCCGCACCGCAT+GGG | + | chr5.3:28594272-28594291 | None:intergenic | 50.0% | |
| TACCGGATAATCATCGACGG+TGG | - | chr5.3:28588541-28588560 | MS.gene032908:CDS | 50.0% | |
| TCACCAGACAGGTGCTCTAT+TGG | - | chr5.3:28594674-28594693 | MS.gene032908:CDS | 50.0% | |
| TCATCCCACCGTCCAAACTA+GGG | - | chr5.3:28592936-28592955 | MS.gene032908:intron | 50.0% | |
| TCGTTTGGGAATGATCCGGA+TGG | - | chr5.3:28588667-28588686 | MS.gene032908:intron | 50.0% | |
| TGGGCAAGAATACTGTGGAG+GGG | - | chr5.3:28593854-28593873 | MS.gene032908:intron | 50.0% | |
| TGTGCAACGAGAATTGGTGG+TGG | + | chr5.3:28588422-28588441 | None:intergenic | 50.0% | |
| TTCCGGCGAGGAAGAGAAAA+CGG | + | chr5.3:28588509-28588528 | None:intergenic | 50.0% | |
| TTCGGCTTATGGCTACTGCT+GGG | - | chr5.3:28588767-28588786 | MS.gene032908:intron | 50.0% | |
| TTGTTGTGCAGTCTCTGGCT+GGG | - | chr5.3:28594549-28594568 | MS.gene032908:CDS | 50.0% | |
| TTTCCCCTAGTTTGGACGGT+GGG | + | chr5.3:28592943-28592962 | None:intergenic | 50.0% | |
| ! | AGGTGTCAGGTGGTATCGAA+AGG | - | chr5.3:28591029-28591048 | MS.gene032908:intron | 50.0% |
| ! | ATCTAGGACTAAGACGACGG+AGG | + | chr5.3:28594812-28594831 | None:intergenic | 50.0% |
| ! | CAAAATCGGCTCATGAGGTG+AGG | + | chr5.3:28591745-28591764 | None:intergenic | 50.0% |
| ! | CCTCACAAAATCGGCTCATG+AGG | + | chr5.3:28591750-28591769 | None:intergenic | 50.0% |
| ! | CGGTACCGGATAATCATCGA+CGG | - | chr5.3:28588538-28588557 | MS.gene032908:CDS | 50.0% |
| ! | CTAGATGAGCTAGCTTGCAG+CGG | + | chr5.3:28589299-28589318 | None:intergenic | 50.0% |
| ! | GGTGTCAGGTGGTATCGAAA+GGG | - | chr5.3:28591030-28591049 | MS.gene032908:intron | 50.0% |
| !! | AATCATGCTCTGGGGACTCT+TGG | - | chr5.3:28590753-28590772 | MS.gene032908:intron | 50.0% |
| !! | CAGCTTGCTTCATTTTGGCC+TGG | - | chr5.3:28591484-28591503 | MS.gene032908:intron | 50.0% |
| !! | CCTCATGAGCCGATTTTGTG+AGG | - | chr5.3:28591747-28591766 | MS.gene032908:CDS | 50.0% |
| !! | TTCTTGGACGGGTTGCAAGT+GGG | - | chr5.3:28594630-28594649 | MS.gene032908:CDS | 50.0% |
| !! | TTTCTTGGACGGGTTGCAAG+TGG | - | chr5.3:28594629-28594648 | MS.gene032908:CDS | 50.0% |
| !!! | CGGTACCGGAGAGTTTTTTC+CGG | + | chr5.3:28588526-28588545 | None:intergenic | 50.0% |
| AACCACTTCCGCAAGCTCAG+TGG | - | chr5.3:28594774-28594793 | MS.gene032908:CDS | 55.0% | |
| AAGCTTGCGGGTTTGTGGCT+TGG | - | chr5.3:28594714-28594733 | MS.gene032908:CDS | 55.0% | |
| ACAGGTGCTCTATTGGGCAG+AGG | - | chr5.3:28594681-28594700 | MS.gene032908:CDS | 55.0% | |
| ACTAAGACGACGGAGGAGTG+GGG | + | chr5.3:28594805-28594824 | None:intergenic | 55.0% | |
| CAACTGGCATGCAGCACACT+CGG | - | chr5.3:28593412-28593431 | MS.gene032908:intron | 55.0% | |
| CATCCCACCGTCCAAACTAG+GGG | - | chr5.3:28592937-28592956 | MS.gene032908:intron | 55.0% | |
| CCGCATGGGTACAAGCGATA+AGG | + | chr5.3:28594258-28594277 | None:intergenic | 55.0% | |
| CCTCGCCGGAAAAAACTCTC+CGG | - | chr5.3:28588518-28588537 | MS.gene032908:CDS | 55.0% | |
| CTAATGTATCCCGCACCGCA+TGG | + | chr5.3:28594273-28594292 | None:intergenic | 55.0% | |
| GACGGATCCCGAAGGAGAAT+TGG | - | chr5.3:28588731-28588750 | MS.gene032908:intron | 55.0% | |
| GACTAAGACGACGGAGGAGT+GGG | + | chr5.3:28594806-28594825 | None:intergenic | 55.0% | |
| GAGATCGTTGTTGGAGGTGG+TGG | - | chr5.3:28588696-28588715 | MS.gene032908:intron | 55.0% | |
| GCTGGGCAAGAATACTGTGG+AGG | - | chr5.3:28593852-28593871 | MS.gene032908:intron | 55.0% | |
| GGAGTGCAGATCTGCAGCAT+TGG | - | chr5.3:28592969-28592988 | MS.gene032908:intron | 55.0% | |
| GGATCCCGAAGGAGAATTGG+AGG | - | chr5.3:28588734-28588753 | MS.gene032908:intron | 55.0% | |
| GTGCTCTATTGGGCAGAGGA+AGG | - | chr5.3:28594685-28594704 | MS.gene032908:CDS | 55.0% | |
| GTTGTTGTGCAGTCTCTGGC+TGG | - | chr5.3:28594548-28594567 | MS.gene032908:CDS | 55.0% | |
| GTTTCCCCTAGTTTGGACGG+TGG | + | chr5.3:28592944-28592963 | None:intergenic | 55.0% | |
| TGAGCTAGGAGAGGACTTCC+AGG | + | chr5.3:28592896-28592915 | None:intergenic | 55.0% | |
| TGAGGGCTAAAGGCAGTTGC+TGG | - | chr5.3:28594488-28594507 | MS.gene032908:CDS | 55.0% | |
| TGCGAAAAGACGGATCCCGA+AGG | - | chr5.3:28588723-28588742 | MS.gene032908:intron | 55.0% | |
| ! | ACGGTGGAAGCACAGGAACT+AGG | - | chr5.3:28588557-28588576 | MS.gene032908:CDS | 55.0% |
| ! | ATCATCGACGGTGGAAGCAC+AGG | - | chr5.3:28588550-28588569 | MS.gene032908:CDS | 55.0% |
| ! | CACCGTTTTCTCTTCCTCGC+CGG | - | chr5.3:28588504-28588523 | MS.gene032908:CDS | 55.0% |
| ! | CGGTGGAAGCACAGGAACTA+GGG | - | chr5.3:28588558-28588577 | MS.gene032908:CDS | 55.0% |
| ! | GAGTACCCTGCAGGAGTACA+AGG | + | chr5.3:28592859-28592878 | None:intergenic | 55.0% |
| ! | GTGCGGGATACATTAGCCTC+AGG | - | chr5.3:28594277-28594296 | MS.gene032908:intron | 55.0% |
| ! | TGCCCAATAGAGCACCTGTC+TGG | + | chr5.3:28594680-28594699 | None:intergenic | 55.0% |
| !! | ACTTGGTGGTGCTTCTGCTC+AGG | - | chr5.3:28590809-28590828 | MS.gene032908:intron | 55.0% |
| !! | GTTTTTCGGATTGGGGCCAC+AGG | - | chr5.3:28593806-28593825 | MS.gene032908:intron | 55.0% |
| CTAAGACGACGGAGGAGTGG+GGG | + | chr5.3:28594804-28594823 | None:intergenic | 60.0% | |
| GAGGAAGCTGCTCACCAGAC+AGG | - | chr5.3:28594663-28594682 | MS.gene032908:CDS | 60.0% | |
| GGACTAAGACGACGGAGGAG+TGG | + | chr5.3:28594807-28594826 | None:intergenic | 60.0% | |
| GGGGAGATCGTTGTTGGAGG+TGG | - | chr5.3:28588693-28588712 | MS.gene032908:intron | 60.0% | |
| TCGCTTGTACCCATGCGGTG+CGG | - | chr5.3:28594260-28594279 | MS.gene032908:intron | 60.0% | |
| TGGCTGGGAGGGAGAGCAAT+GGG | - | chr5.3:28594564-28594583 | MS.gene032908:CDS | 60.0% | |
| TGGGAATGATCCGGATGGGG+CGG | - | chr5.3:28588672-28588691 | MS.gene032908:intron | 60.0% | |
| TGTGCAGTCTCTGGCTGGGA+GGG | - | chr5.3:28594553-28594572 | MS.gene032908:CDS | 60.0% | |
| TTGTGCAGTCTCTGGCTGGG+AGG | - | chr5.3:28594552-28594571 | MS.gene032908:CDS | 60.0% | |
| !! | CATGCTCTGGGGACTCTTGG+AGG | - | chr5.3:28590756-28590775 | MS.gene032908:intron | 60.0% |
| !!! | CCGGAGAGTTTTTTCCGGCG+AGG | + | chr5.3:28588521-28588540 | None:intergenic | 60.0% |
| AACGATCTCCCCGCCCCATC+CGG | + | chr5.3:28588685-28588704 | None:intergenic | 65.0% | |
| CGCTTGTACCCATGCGGTGC+GGG | - | chr5.3:28594261-28594280 | MS.gene032908:intron | 65.0% | |
| CTGGCTGGGAGGGAGAGCAA+TGG | - | chr5.3:28594563-28594582 | MS.gene032908:CDS | 65.0% | |
| GCAAGTGGGTCAGGCTGCAG+AGG | - | chr5.3:28594644-28594663 | MS.gene032908:CDS | 65.0% | |
| GGAATGATCCGGATGGGGCG+GGG | - | chr5.3:28588674-28588693 | MS.gene032908:intron | 65.0% | |
| GGCCACTGAGCTTGCGGAAG+TGG | + | chr5.3:28594779-28594798 | None:intergenic | 65.0% | |
| GGCGGGGAGATCGTTGTTGG+AGG | - | chr5.3:28588690-28588709 | MS.gene032908:intron | 65.0% | |
| GGGAATGATCCGGATGGGGC+GGG | - | chr5.3:28588673-28588692 | MS.gene032908:intron | 65.0% | |
| GGGGATGGCCACTGAGCTTG+CGG | + | chr5.3:28594785-28594804 | None:intergenic | 65.0% | |
| TGGGGCGGGGAGATCGTTGT+TGG | - | chr5.3:28588687-28588706 | MS.gene032908:intron | 65.0% | |
| !! | GGACGGGTTGCAAGTGGGTC+AGG | - | chr5.3:28594635-28594654 | MS.gene032908:CDS | 65.0% |
| GACGACGGAGGAGTGGGGGA+TGG | + | chr5.3:28594800-28594819 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 28588358 | 28594834 | 28588358 | ID=MS.gene032908 |
| chr5.3 | mRNA | 28588358 | 28594834 | 28588358 | ID=MS.gene032908.t1;Parent=MS.gene032908 |
| chr5.3 | exon | 28594294 | 28594834 | 28594294 | ID=MS.gene032908.t1.exon1;Parent=MS.gene032908.t1 |
| chr5.3 | CDS | 28594294 | 28594834 | 28594294 | ID=cds.MS.gene032908.t1;Parent=MS.gene032908.t1 |
| chr5.3 | exon | 28592362 | 28592474 | 28592362 | ID=MS.gene032908.t1.exon2;Parent=MS.gene032908.t1 |
| chr5.3 | CDS | 28592362 | 28592474 | 28592362 | ID=cds.MS.gene032908.t1;Parent=MS.gene032908.t1 |
| chr5.3 | exon | 28591687 | 28591794 | 28591687 | ID=MS.gene032908.t1.exon3;Parent=MS.gene032908.t1 |
| chr5.3 | CDS | 28591687 | 28591794 | 28591687 | ID=cds.MS.gene032908.t1;Parent=MS.gene032908.t1 |
| chr5.3 | exon | 28591157 | 28591211 | 28591157 | ID=MS.gene032908.t1.exon4;Parent=MS.gene032908.t1 |
| chr5.3 | CDS | 28591157 | 28591211 | 28591157 | ID=cds.MS.gene032908.t1;Parent=MS.gene032908.t1 |
| chr5.3 | exon | 28590180 | 28590371 | 28590180 | ID=MS.gene032908.t1.exon5;Parent=MS.gene032908.t1 |
| chr5.3 | CDS | 28590180 | 28590371 | 28590180 | ID=cds.MS.gene032908.t1;Parent=MS.gene032908.t1 |
| chr5.3 | exon | 28589944 | 28590041 | 28589944 | ID=MS.gene032908.t1.exon6;Parent=MS.gene032908.t1 |
| chr5.3 | CDS | 28589944 | 28590041 | 28589944 | ID=cds.MS.gene032908.t1;Parent=MS.gene032908.t1 |
| chr5.3 | exon | 28589189 | 28589385 | 28589189 | ID=MS.gene032908.t1.exon7;Parent=MS.gene032908.t1 |
| chr5.3 | CDS | 28589189 | 28589385 | 28589189 | ID=cds.MS.gene032908.t1;Parent=MS.gene032908.t1 |
| chr5.3 | exon | 28588358 | 28588577 | 28588358 | ID=MS.gene032908.t1.exon8;Parent=MS.gene032908.t1 |
| chr5.3 | CDS | 28588358 | 28588577 | 28588358 | ID=cds.MS.gene032908.t1;Parent=MS.gene032908.t1 |
| Gene Sequence |
| Protein sequence |
