Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070577.t1 | XP_024639766.1 | 95.7 | 437 | 19 | 0 | 1 | 437 | 18 | 454 | 6.80E-243 | 849.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070577.t1 | O80612 | 55.5 | 465 | 195 | 4 | 8 | 460 | 24 | 488 | 9.6e-137 | 488.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070577.t1 | G7KF86 | 95.7 | 437 | 19 | 0 | 1 | 437 | 18 | 454 | 4.9e-243 | 849.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058996 | MS.gene070577 | 0.805783 | 1.13E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene070577 | MS.gene55224 | PPI |
| MS.gene032908 | MS.gene070577 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070577.t1 | MTR_5g040710 | 95.652 | 437 | 19 | 0 | 1 | 437 | 18 | 454 | 0.0 | 852 |
| MS.gene070577.t1 | MTR_7g085090 | 28.043 | 460 | 250 | 14 | 18 | 429 | 6 | 432 | 9.27e-40 | 150 |
| MS.gene070577.t1 | MTR_7g085150 | 29.602 | 402 | 227 | 14 | 57 | 430 | 61 | 434 | 1.39e-39 | 150 |
| MS.gene070577.t1 | MTR_7g085120 | 28.535 | 396 | 228 | 13 | 62 | 430 | 45 | 412 | 2.10e-39 | 149 |
| MS.gene070577.t1 | MTR_7g085180 | 29.040 | 427 | 251 | 14 | 57 | 460 | 40 | 437 | 7.14e-39 | 147 |
| MS.gene070577.t1 | MTR_7g085150 | 29.500 | 400 | 226 | 14 | 57 | 428 | 61 | 432 | 7.89e-39 | 147 |
| MS.gene070577.t1 | MTR_7g085200 | 30.000 | 400 | 226 | 14 | 57 | 430 | 39 | 410 | 9.07e-39 | 147 |
| MS.gene070577.t1 | MTR_5g025280 | 26.620 | 432 | 265 | 11 | 40 | 430 | 81 | 501 | 2.42e-38 | 149 |
| MS.gene070577.t1 | MTR_7g085200 | 29.602 | 402 | 227 | 14 | 57 | 430 | 39 | 412 | 3.02e-37 | 143 |
| MS.gene070577.t1 | MTR_6g033000 | 28.040 | 403 | 237 | 12 | 55 | 430 | 72 | 448 | 1.97e-36 | 141 |
| MS.gene070577.t1 | MTR_8g072360 | 26.697 | 442 | 248 | 15 | 49 | 429 | 89 | 515 | 2.12e-34 | 137 |
| MS.gene070577.t1 | MTR_4g105480 | 25.000 | 480 | 291 | 17 | 19 | 438 | 5 | 475 | 1.92e-31 | 128 |
| MS.gene070577.t1 | MTR_4g036220 | 25.974 | 385 | 219 | 14 | 62 | 430 | 55 | 389 | 1.25e-25 | 109 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene070577.t1 | AT2G02970 | 55.484 | 465 | 195 | 4 | 8 | 460 | 24 | 488 | 1.86e-174 | 503 |
| MS.gene070577.t1 | AT1G14230 | 52.983 | 419 | 188 | 3 | 26 | 439 | 43 | 457 | 6.14e-160 | 464 |
| MS.gene070577.t1 | AT1G14250 | 51.002 | 449 | 199 | 5 | 8 | 439 | 5 | 449 | 8.68e-160 | 463 |
| MS.gene070577.t1 | AT1G14240 | 53.786 | 383 | 169 | 3 | 60 | 439 | 68 | 445 | 4.45e-146 | 428 |
| MS.gene070577.t1 | AT1G14240 | 53.786 | 383 | 169 | 3 | 60 | 439 | 68 | 445 | 4.45e-146 | 428 |
| MS.gene070577.t1 | AT1G14240 | 53.786 | 383 | 169 | 3 | 60 | 439 | 68 | 445 | 4.45e-146 | 428 |
| MS.gene070577.t1 | AT1G14240 | 52.742 | 383 | 169 | 4 | 60 | 439 | 68 | 441 | 6.28e-141 | 414 |
| MS.gene070577.t1 | AT4G19180 | 28.605 | 423 | 268 | 12 | 37 | 429 | 121 | 539 | 4.91e-42 | 160 |
| MS.gene070577.t1 | AT4G19180 | 28.605 | 423 | 268 | 12 | 37 | 429 | 121 | 539 | 4.91e-42 | 160 |
| MS.gene070577.t1 | AT4G19180 | 28.605 | 423 | 268 | 12 | 37 | 429 | 121 | 539 | 4.91e-42 | 160 |
| MS.gene070577.t1 | AT5G18280 | 26.977 | 430 | 251 | 13 | 62 | 462 | 71 | 466 | 5.58e-35 | 137 |
| MS.gene070577.t1 | AT3G04080 | 27.103 | 428 | 253 | 13 | 62 | 462 | 70 | 465 | 1.15e-34 | 136 |
Find 141 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTCACGCAATATTAAATT+TGG | 0.062060 | 5.3:-28520037 | MS.gene070577:CDS |
| GGGTTTCTGGATTTGTGTTT+AGG | 0.206595 | 5.3:-28522493 | MS.gene070577:CDS |
| AATTCCAATGCTGCCATTTC+AGG | 0.222587 | 5.3:+28515562 | None:intergenic |
| GAAATGGCAGCATTGGAATT+TGG | 0.231952 | 5.3:-28515559 | MS.gene070577:CDS |
| GGTTTCTGGATTTGTGTTTA+GGG | 0.253193 | 5.3:-28522492 | MS.gene070577:CDS |
| GTTAAGATTTGTTGGTTTCT+TGG | 0.256150 | 5.3:-28515695 | MS.gene070577:CDS |
| AGCCACAGCTTGCTTCATTT+TGG | 0.256995 | 5.3:-28519992 | MS.gene070577:CDS |
| TGAAGTTCAAGAGAAGATTT+TGG | 0.262870 | 5.3:-28522537 | MS.gene070577:CDS |
| AGAGATTTGTGGAACGGATT+TGG | 0.271813 | 5.3:+28522960 | None:intergenic |
| CCGAAAAGTTTCCCCTTGTT+TGG | 0.276039 | 5.3:+28517386 | None:intergenic |
| CTCTGCTTCATGACAGTCTT+GGG | 0.277737 | 5.3:-28516372 | MS.gene070577:CDS |
| CTTATTCCAGTTCTTAATCT+AGG | 0.291775 | 5.3:+28515485 | None:intergenic |
| GTTTCCCTCCAATTCTCCTT+CGG | 0.320355 | 5.3:+28522605 | None:intergenic |
| TTTCCCTCCAATTCTCCTTC+GGG | 0.334814 | 5.3:+28522606 | None:intergenic |
| GATTTGTGTTTAGGGATGAT+TGG | 0.340894 | 5.3:-28522484 | MS.gene070577:CDS |
| GGTTGTTGCTAATCATGCTC+TGG | 0.342945 | 5.3:-28520654 | MS.gene070577:CDS |
| GATTGGGCTTCTGTTATAAC+AGG | 0.347011 | 5.3:-28522467 | MS.gene070577:intron |
| TGACAGTCTTGGGATTGATA+TGG | 0.358116 | 5.3:-28516362 | MS.gene070577:CDS |
| TTTGTGGCTTGGTGTTATTT+TGG | 0.363469 | 5.3:-28515585 | MS.gene070577:CDS |
| GGAAACGGAGATTCGGCTTA+TGG | 0.363497 | 5.3:-28522588 | MS.gene070577:CDS |
| GGTTTCAATGAGGGTGAATC+CGG | 0.365646 | 5.3:-28522708 | MS.gene070577:CDS |
| TCACCAAACAGGCACTCTAT+TGG | 0.367923 | 5.3:-28515635 | MS.gene070577:CDS |
| AATCATGCTCTGGGGACTCT+TGG | 0.371593 | 5.3:-28520644 | MS.gene070577:CDS |
| GGCCACCGAGCTTGCGGAAG+TGG | 0.372082 | 5.3:+28515534 | None:intergenic |
| CACCAAACAGGCACTCTATT+GGG | 0.375778 | 5.3:-28515634 | MS.gene070577:CDS |
| AGCATTGCTATTATTACAAA+AGG | 0.384142 | 5.3:-28517350 | MS.gene070577:CDS |
| GGGGAGATCGTTGTTGGAGG+TGG | 0.384223 | 5.3:-28522651 | MS.gene070577:CDS |
| TCTCACGCAATATTAAATTT+GGG | 0.385329 | 5.3:-28520036 | MS.gene070577:CDS |
| CTATTCAGCTTGCGGGTTTG+TGG | 0.387319 | 5.3:-28515601 | MS.gene070577:CDS |
| CACTGTAGGTTAAGATTTGT+TGG | 0.387990 | 5.3:-28515703 | MS.gene070577:intron |
| GACGGATCCCGAAGGAGAAT+TGG | 0.392263 | 5.3:-28522613 | MS.gene070577:CDS |
| ACTCTTATAATGTTGATTCA+TGG | 0.401876 | 5.3:-28517459 | MS.gene070577:CDS |
| CAGCTTGCGGGTTTGTGGCT+TGG | 0.402994 | 5.3:-28515596 | MS.gene070577:CDS |
| GGCGGGGAGATCGTTGTTGG+AGG | 0.403676 | 5.3:-28522654 | MS.gene070577:CDS |
| TGGAGAGAAACGCTTATATC+AGG | 0.403950 | 5.3:-28518677 | MS.gene070577:CDS |
| TGCCCAATAGAGTGCCTGTT+TGG | 0.412479 | 5.3:+28515632 | None:intergenic |
| AACGATCTCCCCGCCCCATC+CGG | 0.420560 | 5.3:+28522662 | None:intergenic |
| GGACGGGTTGCAAGTGGGTC+AGG | 0.421255 | 5.3:-28515674 | MS.gene070577:CDS |
| AGGAAGGCTATTCAGCTTGC+GGG | 0.435651 | 5.3:-28515608 | MS.gene070577:CDS |
| GAGATCGTTGTTGGAGGTGG+TGG | 0.435877 | 5.3:-28522648 | MS.gene070577:CDS |
| CTGTCCAAGTTGATGACTGC+TGG | 0.438069 | 5.3:-28516499 | MS.gene070577:CDS |
| ATTTGTGTTTAGGGATGATT+GGG | 0.444067 | 5.3:-28522483 | MS.gene070577:CDS |
| GAGAATGATCCGGATGGGGC+GGG | 0.444231 | 5.3:-28522671 | MS.gene070577:CDS |
| ATTCGGCTTATGGCTACTGC+TGG | 0.447016 | 5.3:-28522578 | MS.gene070577:CDS |
| AGATTTGTTGGTTTCTTGGA+CGG | 0.447831 | 5.3:-28515691 | MS.gene070577:CDS |
| TGGGGCGGGGAGATCGTTGT+TGG | 0.453920 | 5.3:-28522657 | MS.gene070577:CDS |
| ATTGGAGGGAAACGGAGATT+CGG | 0.457361 | 5.3:-28522595 | MS.gene070577:CDS |
| GCTCTGCTTCATGACAGTCT+TGG | 0.457574 | 5.3:-28516373 | MS.gene070577:CDS |
| ACTTGGTGGTGCTTCTGCTC+AGG | 0.458271 | 5.3:-28520588 | MS.gene070577:intron |
| TCTTATCAGCATTGCGACAT+AGG | 0.458731 | 5.3:-28517181 | MS.gene070577:CDS |
| TTGGCCTGAAATGGCAGCAT+TGG | 0.463160 | 5.3:-28515566 | MS.gene070577:CDS |
| CTGATGAAGGAGTGTATGCT+TGG | 0.472336 | 5.3:-28520676 | MS.gene070577:CDS |
| AAGAATACTGTGGAGGGGAT+TGG | 0.472820 | 5.3:-28516474 | MS.gene070577:CDS |
| GATTTGTTGGTTTCTTGGAC+GGG | 0.475013 | 5.3:-28515690 | MS.gene070577:CDS |
| GCATTGCTATTATTACAAAA+GGG | 0.478914 | 5.3:-28517349 | MS.gene070577:CDS |
| ATAGATCCTTGTACTCCTGC+AGG | 0.481561 | 5.3:-28517484 | MS.gene070577:CDS |
| TTTCCCCTTGTTTGGACGGT+GGG | 0.482384 | 5.3:+28517394 | None:intergenic |
| GAAGAGTTTGGTTTCAATGA+GGG | 0.486211 | 5.3:-28522717 | MS.gene070577:CDS |
| GGACTAATACGACGGATAAG+TGG | 0.486481 | 5.3:+28515506 | None:intergenic |
| GAGCAAGCTGCTCACCAAAC+AGG | 0.488638 | 5.3:-28515646 | MS.gene070577:CDS |
| GTTGTTGCTAATCATGCTCT+GGG | 0.489198 | 5.3:-28520653 | MS.gene070577:CDS |
| GACTAATACGACGGATAAGT+GGG | 0.493871 | 5.3:+28515507 | None:intergenic |
| AGAATGATCCGGATGGGGCG+GGG | 0.495615 | 5.3:-28522670 | MS.gene070577:CDS |
| TTCCGGCGAGGAAGAGAAAA+CGG | 0.500842 | 5.3:+28522838 | None:intergenic |
| ACGGTGGAAGCACAGGAACT+AGG | 0.503705 | 5.3:-28522787 | MS.gene070577:CDS |
| CATGCTCTGGGGACTCTTGG+AGG | 0.505655 | 5.3:-28520641 | MS.gene070577:CDS |
| CGGTGGAAGCACAGGAACTA+GGG | 0.506205 | 5.3:-28522786 | MS.gene070577:CDS |
| AAAGTTTCCCCTTGTTTGGA+CGG | 0.511985 | 5.3:+28517390 | None:intergenic |
| ACTACTGGCATTATTGAACT+TGG | 0.512510 | 5.3:-28520605 | MS.gene070577:CDS |
| ACTGGCATTATTGAACTTGG+TGG | 0.517297 | 5.3:-28520602 | MS.gene070577:CDS |
| AAGTAAATCTTCCTCGTCAT+GGG | 0.522232 | 5.3:+28516426 | None:intergenic |
| ATCGTCGTTTGAGAATGATC+CGG | 0.522917 | 5.3:-28522681 | MS.gene070577:CDS |
| TGGAACCACTTCCGCAAGCT+CGG | 0.525939 | 5.3:-28515539 | MS.gene070577:CDS |
| TTGCCCAGCAGTCATCAACT+TGG | 0.529085 | 5.3:+28516495 | None:intergenic |
| TTCCACCGTCGATGATTATC+CGG | 0.529540 | 5.3:+28522801 | None:intergenic |
| GAAGGAGAATTGGAGGGAAA+CGG | 0.530963 | 5.3:-28522603 | MS.gene070577:CDS |
| TATATCAGGAGATTCTAACT+TGG | 0.533486 | 5.3:-28518663 | MS.gene070577:CDS |
| TTCTTGGACGGGTTGCAAGT+GGG | 0.534910 | 5.3:-28515679 | MS.gene070577:CDS |
| ATCATCGACGGTGGAAGCAC+AGG | 0.536826 | 5.3:-28522794 | MS.gene070577:CDS |
| GGATCCCGAAGGAGAATTGG+AGG | 0.538031 | 5.3:-28522610 | MS.gene070577:CDS |
| GAGTACCCTGCAGGAGTACA+AGG | 0.538999 | 5.3:+28517478 | None:intergenic |
| ATATCAGGAGATTCTAACTT+GGG | 0.540822 | 5.3:-28518662 | MS.gene070577:intron |
| GAAGCAAGCTGTGGCTGTAA+AGG | 0.542738 | 5.3:+28519999 | None:intergenic |
| ATCATCCCACCGTCCAAACA+AGG | 0.546022 | 5.3:-28517399 | MS.gene070577:CDS |
| CGTTTGAGAATGATCCGGAT+GGG | 0.546140 | 5.3:-28522676 | MS.gene070577:CDS |
| TTTCTTGGACGGGTTGCAAG+TGG | 0.546941 | 5.3:-28515680 | MS.gene070577:CDS |
| CTGGGCAAGAATACTGTGGA+GGG | 0.548975 | 5.3:-28516480 | MS.gene070577:CDS |
| GGTGATCCTTCAGAGACTAC+TGG | 0.549868 | 5.3:-28520620 | MS.gene070577:CDS |
| GGGGATGGCCACCGAGCTTG+CGG | 0.551616 | 5.3:+28515528 | None:intergenic |
| TGAGAATGATCCGGATGGGG+CGG | 0.552417 | 5.3:-28522672 | MS.gene070577:CDS |
| GTTTCAATGAGGGTGAATCC+GGG | 0.554455 | 5.3:-28522707 | MS.gene070577:CDS |
| GAGGAAGGCTATTCAGCTTG+CGG | 0.560557 | 5.3:-28515609 | MS.gene070577:CDS |
| AAATTTCTTTCACACATCAA+AGG | 0.565474 | 5.3:-28517113 | MS.gene070577:intron |
| TTCACTTAGTGAGCTAGGAG+AGG | 0.565962 | 5.3:+28517432 | None:intergenic |
| TGATGAAGGAGTGTATGCTT+GGG | 0.566289 | 5.3:-28520675 | MS.gene070577:CDS |
| ACATTATAAGAGTACCCTGC+AGG | 0.569973 | 5.3:+28517469 | None:intergenic |
| TTCGGCTTATGGCTACTGCT+GGG | 0.570321 | 5.3:-28522577 | MS.gene070577:CDS |
| CATTGCTATTATTACAAAAG+GGG | 0.571476 | 5.3:-28517348 | MS.gene070577:CDS |
| CATCGCTTCTCTTGATACAA+AGG | 0.571559 | 5.3:+28520069 | None:intergenic |
| AGATGTGCAACGTGAATTTG+TGG | 0.573326 | 5.3:+28522922 | None:intergenic |
| TGGTGGAGTTTGCGAAAAGA+CGG | 0.574091 | 5.3:-28522631 | MS.gene070577:CDS |
| AGCTTCTCAGTATATTCAGA+AGG | 0.575665 | 5.3:-28517515 | MS.gene070577:CDS |
| TTAATATTGCGTGAGAACAA+AGG | 0.575775 | 5.3:+28520043 | None:intergenic |
| GAAGTAAATCTTCCTCGTCA+TGG | 0.576351 | 5.3:+28516425 | None:intergenic |
| GCTTCTCAGTATATTCAGAA+GGG | 0.576641 | 5.3:-28517514 | MS.gene070577:CDS |
| TTCTCAAACGACGATAAACC+CGG | 0.577903 | 5.3:+28522689 | None:intergenic |
| GCAACGTGAATTTGTGGTGG+TGG | 0.578101 | 5.3:+28522928 | None:intergenic |
| CTATTATTACAAAAGGGGAA+AGG | 0.578107 | 5.3:-28517343 | MS.gene070577:intron |
| GTTTGAGAATGATCCGGATG+GGG | 0.578504 | 5.3:-28522675 | MS.gene070577:CDS |
| AGAAGAGTTTGGTTTCAATG+AGG | 0.588916 | 5.3:-28522718 | MS.gene070577:CDS |
| GAGAGAAGAGATTTGTGGAA+CGG | 0.591548 | 5.3:+28522954 | None:intergenic |
| CGTCGATGATTATCCGGTAC+CGG | 0.595219 | 5.3:+28522807 | None:intergenic |
| GCACTCTATTGGGCAGAGGA+AGG | 0.595572 | 5.3:-28515624 | MS.gene070577:CDS |
| TGTCCAAGTTGATGACTGCT+GGG | 0.602078 | 5.3:-28516498 | MS.gene070577:CDS |
| GTTTCCCCTTGTTTGGACGG+TGG | 0.605584 | 5.3:+28517393 | None:intergenic |
| AGAATGTTGCTCATGACTCA+TGG | 0.607083 | 5.3:-28518697 | MS.gene070577:CDS |
| GGTGCGAGAGAAGAGATTTG+TGG | 0.608157 | 5.3:+28522949 | None:intergenic |
| TCGTTTGAGAATGATCCGGA+TGG | 0.609063 | 5.3:-28522677 | MS.gene070577:CDS |
| ACAGGCACTCTATTGGGCAG+AGG | 0.610855 | 5.3:-28515628 | MS.gene070577:CDS |
| TGCGAAAAGACGGATCCCGA+AGG | 0.612655 | 5.3:-28522621 | MS.gene070577:CDS |
| ATAATGCCAGTAGTCTCTGA+AGG | 0.616776 | 5.3:+28520614 | None:intergenic |
| TCATCCCACCGTCCAAACAA+GGG | 0.624302 | 5.3:-28517398 | MS.gene070577:CDS |
| TTAATCTAGGACTAATACGA+CGG | 0.627109 | 5.3:+28515498 | None:intergenic |
| CTTCTCAGTATATTCAGAAG+GGG | 0.627978 | 5.3:-28517513 | MS.gene070577:CDS |
| TAGATCCTTGTACTCCTGCA+GGG | 0.629301 | 5.3:-28517483 | MS.gene070577:CDS |
| CATCCCACCGTCCAAACAAG+GGG | 0.635715 | 5.3:-28517397 | MS.gene070577:CDS |
| GCTGGGCAAGAATACTGTGG+AGG | 0.643454 | 5.3:-28516481 | MS.gene070577:CDS |
| GATCCCGAAGGAGAATTGGA+GGG | 0.660632 | 5.3:-28522609 | MS.gene070577:CDS |
| AAAATATGTCTCCCATGACG+AGG | 0.661548 | 5.3:-28516437 | MS.gene070577:CDS |
| GGCCAAAATGAAGCAAGCTG+TGG | 0.669202 | 5.3:+28519990 | None:intergenic |
| AACCACTTCCGCAAGCTCGG+TGG | 0.680858 | 5.3:-28515536 | MS.gene070577:CDS |
| CGGTACCGGATAATCATCGA+CGG | 0.689344 | 5.3:-28522806 | MS.gene070577:CDS |
| TGGGCAAGAATACTGTGGAG+GGG | 0.700121 | 5.3:-28516479 | MS.gene070577:CDS |
| TACCGGATAATCATCGACGG+TGG | 0.701276 | 5.3:-28522803 | MS.gene070577:CDS |
| ACTAATACGACGGATAAGTG+GGG | 0.701495 | 5.3:+28515508 | None:intergenic |
| CTAATACGACGGATAAGTGG+GGG | 0.701535 | 5.3:+28515509 | None:intergenic |
| GGATTGATATGGATGATGAG+AGG | 0.704385 | 5.3:-28516351 | MS.gene070577:intron |
| ACTGCTGGGCAAGAATACTG+TGG | 0.705946 | 5.3:-28516484 | MS.gene070577:CDS |
| AACTTGGACAGATAAGCCTG+TGG | 0.706967 | 5.3:+28516511 | None:intergenic |
| TGTGCAACGTGAATTTGTGG+TGG | 0.737369 | 5.3:+28522925 | None:intergenic |
| TTGTTGCTAATCATGCTCTG+GGG | 0.748131 | 5.3:-28520652 | MS.gene070577:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 28515498 | 28523008 | 28515498 | ID=MS.gene070577 |
| chr5.3 | mRNA | 28515498 | 28523008 | 28515498 | ID=MS.gene070577.t1;Parent=MS.gene070577 |
| chr5.3 | exon | 28522468 | 28523008 | 28522468 | ID=MS.gene070577.t1.exon1;Parent=MS.gene070577.t1 |
| chr5.3 | CDS | 28522468 | 28523008 | 28522468 | ID=cds.MS.gene070577.t1;Parent=MS.gene070577.t1 |
| chr5.3 | exon | 28520589 | 28520701 | 28520589 | ID=MS.gene070577.t1.exon2;Parent=MS.gene070577.t1 |
| chr5.3 | CDS | 28520589 | 28520701 | 28520589 | ID=cds.MS.gene070577.t1;Parent=MS.gene070577.t1 |
| chr5.3 | exon | 28519988 | 28520095 | 28519988 | ID=MS.gene070577.t1.exon3;Parent=MS.gene070577.t1 |
| chr5.3 | CDS | 28519988 | 28520095 | 28519988 | ID=cds.MS.gene070577.t1;Parent=MS.gene070577.t1 |
| chr5.3 | exon | 28518663 | 28518717 | 28518663 | ID=MS.gene070577.t1.exon4;Parent=MS.gene070577.t1 |
| chr5.3 | CDS | 28518663 | 28518717 | 28518663 | ID=cds.MS.gene070577.t1;Parent=MS.gene070577.t1 |
| chr5.3 | exon | 28517344 | 28517535 | 28517344 | ID=MS.gene070577.t1.exon5;Parent=MS.gene070577.t1 |
| chr5.3 | CDS | 28517344 | 28517535 | 28517344 | ID=cds.MS.gene070577.t1;Parent=MS.gene070577.t1 |
| chr5.3 | exon | 28517114 | 28517211 | 28517114 | ID=MS.gene070577.t1.exon6;Parent=MS.gene070577.t1 |
| chr5.3 | CDS | 28517114 | 28517211 | 28517114 | ID=cds.MS.gene070577.t1;Parent=MS.gene070577.t1 |
| chr5.3 | exon | 28516352 | 28516548 | 28516352 | ID=MS.gene070577.t1.exon7;Parent=MS.gene070577.t1 |
| chr5.3 | CDS | 28516352 | 28516548 | 28516352 | ID=cds.MS.gene070577.t1;Parent=MS.gene070577.t1 |
| chr5.3 | exon | 28515498 | 28515717 | 28515498 | ID=MS.gene070577.t1.exon8;Parent=MS.gene070577.t1 |
| chr5.3 | CDS | 28515498 | 28515717 | 28515498 | ID=cds.MS.gene070577.t1;Parent=MS.gene070577.t1 |
| Gene Sequence |
| Protein sequence |
