Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene034303.t1 | XP_013454481.1 | 99.4 | 799 | 5 | 0 | 1 | 799 | 1 | 799 | 0.00E+00 | 1501.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene034303.t1 | Q56ZN6 | 86.9 | 801 | 103 | 1 | 1 | 799 | 2 | 802 | 0.0e+00 | 1350.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene034303.t1 | A0A072UFQ2 | 99.4 | 799 | 5 | 0 | 1 | 799 | 1 | 799 | 0.0e+00 | 1501.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene034303 | MS.gene052985 | PPI |
MS.gene034303 | MS.gene98130 | PPI |
MS.gene034303 | MS.gene060331 | PPI |
MS.gene052985 | MS.gene034303 | PPI |
MS.gene036690 | MS.gene034303 | PPI |
MS.gene053118 | MS.gene034303 | PPI |
MS.gene034303 | MS.gene060330 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene034303.t1 | MTR_4g005280 | 99.374 | 799 | 5 | 0 | 1 | 799 | 1 | 799 | 0.0 | 1590 |
MS.gene034303.t1 | MTR_4g115970 | 39.369 | 729 | 371 | 14 | 95 | 798 | 73 | 755 | 6.49e-148 | 452 |
MS.gene034303.t1 | MTR_4g115970 | 40.072 | 559 | 290 | 9 | 152 | 699 | 47 | 571 | 1.94e-112 | 355 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene034303.t1 | AT1G16780 | 86.517 | 801 | 106 | 1 | 1 | 799 | 2 | 802 | 0.0 | 1426 |
MS.gene034303.t1 | AT1G16780 | 86.517 | 801 | 106 | 1 | 1 | 799 | 2 | 802 | 0.0 | 1426 |
MS.gene034303.t1 | AT1G16780 | 86.517 | 801 | 106 | 1 | 1 | 799 | 2 | 802 | 0.0 | 1426 |
MS.gene034303.t1 | AT1G78920 | 86.891 | 801 | 103 | 1 | 1 | 799 | 2 | 802 | 0.0 | 1415 |
MS.gene034303.t1 | AT1G78920 | 86.891 | 801 | 103 | 1 | 1 | 799 | 2 | 802 | 0.0 | 1415 |
MS.gene034303.t1 | AT1G78920 | 86.891 | 801 | 103 | 1 | 1 | 799 | 2 | 802 | 0.0 | 1415 |
MS.gene034303.t1 | AT1G15690 | 38.874 | 728 | 376 | 14 | 95 | 798 | 77 | 759 | 1.49e-147 | 452 |
MS.gene034303.t1 | AT1G15690 | 36.634 | 606 | 327 | 14 | 84 | 665 | 60 | 632 | 1.89e-101 | 327 |
Find 217 sgRNAs with CRISPR-Local
Find 443 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTGATCTCTCGGACACTTTC+AGG | 0.202699 | 4.3:+89334839 | None:intergenic |
CATAATTGCTGGGGTTAGTT+TGG | 0.214531 | 4.3:-89335179 | MS.gene034303:CDS |
GTATTAACCTGAACCATTTC+AGG | 0.219472 | 4.3:+89338460 | None:intergenic |
CTCCTAGTTGGATATGGATT+TGG | 0.258450 | 4.3:-89337264 | MS.gene034303:CDS |
CCTCTTCTCCTAGTTGGATA+TGG | 0.267869 | 4.3:-89337270 | MS.gene034303:CDS |
GTTCTGCACACCTGTTTAAA+AGG | 0.268492 | 4.3:+89334686 | None:intergenic |
ATAATTGCTGGGGTTAGTTT+GGG | 0.271626 | 4.3:-89335178 | MS.gene034303:CDS |
GTGATGACAAAGACAATAAT+TGG | 0.296694 | 4.3:+89338553 | None:intergenic |
TGAACACAGCTGGTGGTGCC+TGG | 0.305767 | 4.3:-89333344 | MS.gene034303:CDS |
CTGAACAAAGGGCACCTAAA+AGG | 0.319212 | 4.3:+89338069 | None:intergenic |
AACAGTGTCTGGTATTCTTA+TGG | 0.322376 | 4.3:-89333376 | MS.gene034303:CDS |
GATTGTCTCGGCCTACTGGC+TGG | 0.322613 | 4.3:-89335113 | MS.gene034303:CDS |
CCTTCTGTTTAGTGCTTACA+TGG | 0.322712 | 4.3:-89334735 | MS.gene034303:CDS |
GCAATAACAGCAGGATTTCT+AGG | 0.324300 | 4.3:+89337129 | None:intergenic |
TATATTTGTCTTTAGTGCTT+GGG | 0.330337 | 4.3:-89334517 | MS.gene034303:CDS |
TGTTGCACTGTTTGCTCAGT+TGG | 0.331138 | 4.3:-89337232 | MS.gene034303:CDS |
ATTCGGGGTACGCGTGAATC+TGG | 0.339245 | 4.3:-89335687 | MS.gene034303:CDS |
TAAGGTTTAGAACGCATGTT+AGG | 0.339289 | 4.3:+89338768 | None:intergenic |
AACCCAACTGGCGGGCTGTT+TGG | 0.345596 | 4.3:-89335058 | MS.gene034303:CDS |
TTATATTTGTCTTTAGTGCT+TGG | 0.350720 | 4.3:-89334518 | MS.gene034303:CDS |
AAATCCTTTGGTGGTGGCTT+TGG | 0.352874 | 4.3:+89334787 | None:intergenic |
CATTGAGAGGCCTGGTATAA+TGG | 0.354472 | 4.3:-89334436 | MS.gene034303:intron |
TGGCTGGGAGTGGGCACACC+TGG | 0.358855 | 4.3:-89337777 | MS.gene034303:CDS |
CGCATGTTAGGGAAAGTTCT+TGG | 0.364305 | 4.3:+89338780 | None:intergenic |
AGCTGTTCTGGCATTTGGTC+TGG | 0.366296 | 4.3:-89335598 | MS.gene034303:intron |
AAGCTTCCTGTTGAGGAGTT+GGG | 0.368604 | 4.3:+89338222 | None:intergenic |
ATTCTTACCATGGATATGTT+TGG | 0.370822 | 4.3:-89334992 | MS.gene034303:CDS |
TTGCTGGATATGTAGGGATG+TGG | 0.380264 | 4.3:-89338043 | MS.gene034303:CDS |
TACATAGAGACCGGAGCTCT+TGG | 0.380742 | 4.3:-89333306 | MS.gene034303:CDS |
TTATCAGCTCTTATCGTTGT+TGG | 0.383096 | 4.3:-89337846 | MS.gene034303:CDS |
GTCTTCAAGAGAGGCATTGC+AGG | 0.388478 | 4.3:-89337976 | MS.gene034303:intron |
ATACTAAAGCAGCTGATGTT+GGG | 0.393066 | 4.3:-89337197 | MS.gene034303:CDS |
CATGGCACTAACATAATTGC+TGG | 0.393948 | 4.3:-89335190 | MS.gene034303:CDS |
ACTCCTCAACAGGAAGCTTC+TGG | 0.394465 | 4.3:-89338218 | MS.gene034303:CDS |
GCTGGAATCTACTGGTCTTC+CGG | 0.395596 | 4.3:-89335155 | MS.gene034303:CDS |
AAACATAAAATGTGGCATAA+AGG | 0.395610 | 4.3:+89337799 | None:intergenic |
ATCATTTCACCTATTGTAGT+TGG | 0.395808 | 4.3:-89334230 | MS.gene034303:intron |
TGCCAAACAGCCCGCCAGTT+GGG | 0.396544 | 4.3:+89335056 | None:intergenic |
GAAGCTTCCTGTTGAGGAGT+TGG | 0.397166 | 4.3:+89338221 | None:intergenic |
GTAAACTCACCAACTACAAT+AGG | 0.397201 | 4.3:+89334221 | None:intergenic |
CTGATGTTTGCAACAGTGTC+TGG | 0.399266 | 4.3:-89333387 | MS.gene034303:CDS |
GGATTTCTAGGGTCATCTTC+AGG | 0.399595 | 4.3:+89337141 | None:intergenic |
TCTTCTGTTTCAGATCCATC+TGG | 0.400300 | 4.3:-89335777 | MS.gene034303:intron |
CCTTGTTGGAAAAGTAGAAC+AGG | 0.400333 | 4.3:-89337169 | MS.gene034303:CDS |
TGTTGTTCACTCATTTGATC+TGG | 0.402259 | 4.3:-89335736 | MS.gene034303:CDS |
TACTGGCTGGGACAGACTGC+TGG | 0.404895 | 4.3:-89335100 | MS.gene034303:CDS |
TGCTGGGGTTAGTTTGGGGC+TGG | 0.408336 | 4.3:-89335173 | MS.gene034303:CDS |
GGATTTATCCGGACACAGTA+TGG | 0.409934 | 4.3:-89338308 | MS.gene034303:CDS |
GATGATAAAACCTGGTGCTT+TGG | 0.411442 | 4.3:-89334255 | MS.gene034303:CDS |
CACAACTTTAGCCCCGAGTA+AGG | 0.416921 | 4.3:+89333419 | None:intergenic |
AGCAAGCAACATAGCCATCT+TGG | 0.418136 | 4.3:+89338277 | None:intergenic |
GCTCACAAAGCAGCAATAAC+AGG | 0.418888 | 4.3:-89333267 | MS.gene034303:CDS |
ATAATCAGTGCCATGATACT+AGG | 0.421966 | 4.3:-89335915 | MS.gene034303:CDS |
TGGCGATTGTCTCGGCCTAC+TGG | 0.422518 | 4.3:-89335117 | MS.gene034303:CDS |
CTGTATAGTAGCCCAAAATT+CGG | 0.423075 | 4.3:+89333448 | None:intergenic |
GTTGCACTGTTTGCTCAGTT+GGG | 0.423871 | 4.3:-89337231 | MS.gene034303:CDS |
TTTGCTTTGTGCGGGTTGAT+TGG | 0.430392 | 4.3:-89335310 | MS.gene034303:CDS |
AGCTCTTATCGTTGTTGGTA+TGG | 0.431805 | 4.3:-89337841 | MS.gene034303:CDS |
TCGCAGCCCAACTCCTCAAC+AGG | 0.433376 | 4.3:-89338228 | MS.gene034303:CDS |
CGCTGTTGGCCGAACTGCAC+AGG | 0.434929 | 4.3:-89334487 | MS.gene034303:CDS |
GGAAAGTTCTTGGCCTATCA+TGG | 0.449445 | 4.3:+89338790 | None:intergenic |
GTTTAGTGCTTACATGGATG+AGG | 0.456398 | 4.3:-89334729 | MS.gene034303:CDS |
AGTTTGGGGCTGGAATCTAC+TGG | 0.456442 | 4.3:-89335163 | MS.gene034303:CDS |
AGAACCAATGGCAAATCCTT+TGG | 0.457270 | 4.3:+89334775 | None:intergenic |
TATACAGGGCAACCCTTACT+CGG | 0.457737 | 4.3:-89333432 | MS.gene034303:CDS |
TTAGCTCTTTCTAGCTCTAC+TGG | 0.461182 | 4.3:-89335214 | MS.gene034303:CDS |
TCAGTGCCTCTTCTCCTAGT+TGG | 0.461997 | 4.3:-89337276 | MS.gene034303:intron |
TGCTGGATATGTAGGGATGT+GGG | 0.463967 | 4.3:-89338042 | MS.gene034303:CDS |
CATGATGGATGAAGATATCA+TGG | 0.464184 | 4.3:-89338826 | MS.gene034303:CDS |
GTTGTTGGTATGGCTGTAAT+CGG | 0.468693 | 4.3:-89337831 | MS.gene034303:CDS |
GGACCAGCAGTGTCTTTGAA+TGG | 0.468953 | 4.3:+89332961 | None:intergenic |
CTGTTTGCTCAGTTGGGTGG+TGG | 0.469062 | 4.3:-89337225 | MS.gene034303:CDS |
GCTGGACTAATAGATGAAAC+AGG | 0.469924 | 4.3:-89335082 | MS.gene034303:CDS |
GACTCCTATGGAAGATCCTA+TGG | 0.470305 | 4.3:-89335658 | MS.gene034303:CDS |
ACAGGATTACAAGGAGAAAC+CGG | 0.475584 | 4.3:-89334324 | MS.gene034303:intron |
GCAACACAGCGAGCATAATC+CGG | 0.476998 | 4.3:+89334305 | None:intergenic |
ATTGTCTCGGCCTACTGGCT+GGG | 0.479535 | 4.3:-89335112 | MS.gene034303:CDS |
AGACCGGCACTTACCATGAT+AGG | 0.481059 | 4.3:-89338803 | MS.gene034303:CDS |
TCCAGCAAAACCTGAACAAA+GGG | 0.483605 | 4.3:+89338058 | None:intergenic |
CAACAACTCTCACAGGAAGA+TGG | 0.484051 | 4.3:+89332885 | None:intergenic |
TATACTAAAGCAGCTGATGT+TGG | 0.487327 | 4.3:-89337198 | MS.gene034303:CDS |
CTTGTAGTCAGTATAATACT+TGG | 0.490704 | 4.3:+89335255 | None:intergenic |
CAACAGGAAGCTTCTGGCAT+GGG | 0.492214 | 4.3:-89338212 | MS.gene034303:CDS |
GATGTTGGGGCAGACCTTGT+TGG | 0.498069 | 4.3:-89337183 | MS.gene034303:CDS |
GACCAGCAGTGTCTTTGAAT+GGG | 0.498471 | 4.3:+89332962 | None:intergenic |
TCCCTTGCCTCCAAGAGCTC+CGG | 0.500650 | 4.3:+89333296 | None:intergenic |
GCTTGGGCTTGTGCCGCTGT+TGG | 0.500731 | 4.3:-89334501 | MS.gene034303:CDS |
CTCCAGCATTATCAGCTATC+GGG | 0.502143 | 4.3:+89334969 | None:intergenic |
ATATAGTTCCATACTGTGTC+CGG | 0.503106 | 4.3:+89338300 | None:intergenic |
ATACTTTCTACAGGATTACA+AGG | 0.503676 | 4.3:-89334333 | MS.gene034303:intron |
GGCACAGCTGTAGCAACAAT+GGG | 0.504612 | 4.3:-89335037 | MS.gene034303:CDS |
AACCCACCAACGAAAACTTC+TGG | 0.504930 | 4.3:+89334555 | None:intergenic |
CCTCCAGCATTATCAGCTAT+CGG | 0.506247 | 4.3:+89334968 | None:intergenic |
ACCGGAGCTCTTGGAGGCAA+GGG | 0.509777 | 4.3:-89333297 | MS.gene034303:CDS |
TATTAACCTGAACCATTTCA+GGG | 0.511261 | 4.3:+89338461 | None:intergenic |
CATCAGTGTGGCGATTGTCT+CGG | 0.513177 | 4.3:-89335125 | MS.gene034303:CDS |
CGCTATATATCTTATGAAGT+GGG | 0.514919 | 4.3:-89338506 | MS.gene034303:CDS |
ATAGAGACCGGAGCTCTTGG+AGG | 0.517810 | 4.3:-89333303 | MS.gene034303:CDS |
CTCAACGATTACATTGGTAA+TGG | 0.518087 | 4.3:-89332911 | MS.gene034303:CDS |
ACCACCAAAGGATTTGCCAT+TGG | 0.518351 | 4.3:-89334779 | MS.gene034303:CDS |
GATGAAACAGGAAACCCAAC+TGG | 0.519102 | 4.3:-89335070 | MS.gene034303:CDS |
CTTTCTAGCTCTACTGGCCA+TGG | 0.520652 | 4.3:-89335208 | MS.gene034303:CDS |
TAACAACCTCCTGTGCAGTT+CGG | 0.520733 | 4.3:+89334478 | None:intergenic |
ATGGAGCTGAAGGATTTATC+CGG | 0.521496 | 4.3:-89338319 | MS.gene034303:CDS |
GTACTTCTTTGCATTATCCC+AGG | 0.521610 | 4.3:+89333326 | None:intergenic |
GAAATGATTGCCAAAGCACC+AGG | 0.522732 | 4.3:+89334245 | None:intergenic |
GTGCCAAACAGCCCGCCAGT+TGG | 0.522998 | 4.3:+89335055 | None:intergenic |
GGCTTTGGTTGTGTTACCCA+CGG | 0.523635 | 4.3:+89334802 | None:intergenic |
AACAACTCTCACAGGAAGAT+GGG | 0.526459 | 4.3:+89332886 | None:intergenic |
TAATCAGTGCCATGATACTA+GGG | 0.526459 | 4.3:-89335914 | MS.gene034303:CDS |
ATACAGGGCAACCCTTACTC+GGG | 0.533052 | 4.3:-89333431 | MS.gene034303:CDS |
TCCTGCTGTTATTGCTGACC+TGG | 0.533883 | 4.3:-89337121 | MS.gene034303:intron |
CTTAAACTTACCATTATACC+AGG | 0.534249 | 4.3:+89334426 | None:intergenic |
CAGATATTTCGTATTCTACT+CGG | 0.534654 | 4.3:-89338652 | MS.gene034303:CDS |
GGCAAGCGCAGCAGAACCAA+TGG | 0.535580 | 4.3:+89334763 | None:intergenic |
GAACACAGCTGGTGGTGCCT+GGG | 0.539192 | 4.3:-89333343 | MS.gene034303:CDS |
GACCGGAGCTCTTGGAGGCA+AGG | 0.539834 | 4.3:-89333298 | MS.gene034303:CDS |
ATGCCAGAAGCTTCCTGTTG+AGG | 0.540435 | 4.3:+89338215 | None:intergenic |
AATTGTAGAAATGAGTCAGC+AGG | 0.542639 | 4.3:-89334945 | MS.gene034303:intron |
ATGGCACTAACATAATTGCT+GGG | 0.543319 | 4.3:-89335189 | MS.gene034303:CDS |
TGGCACAGCTGTAGCAACAA+TGG | 0.545541 | 4.3:-89335038 | MS.gene034303:CDS |
TCCTTCAGCTCCATCTCGTA+TGG | 0.546487 | 4.3:+89338328 | None:intergenic |
CGCTGCTTATATTCTTACCA+TGG | 0.547501 | 4.3:-89335002 | MS.gene034303:CDS |
AAGGAAGCTGAGAATACAAA+TGG | 0.547852 | 4.3:+89338531 | None:intergenic |
CTGAGCAAACAGTGCAACAA+AGG | 0.548581 | 4.3:+89337236 | None:intergenic |
AGGCAGTTCATTGAGAGGCC+TGG | 0.551166 | 4.3:-89334444 | MS.gene034303:CDS |
CAATAACAGCAGGATTTCTA+GGG | 0.553964 | 4.3:+89337130 | None:intergenic |
ATCTGGACTAATGACTCCTA+TGG | 0.555931 | 4.3:-89335670 | MS.gene034303:CDS |
AATGGCAAATCCTTTGGTGG+TGG | 0.556027 | 4.3:+89334781 | None:intergenic |
GCAAAGAAGTACATAGAGAC+CGG | 0.557523 | 4.3:-89333315 | MS.gene034303:CDS |
TGGCCTATCATGGTAAGTGC+CGG | 0.559300 | 4.3:+89338800 | None:intergenic |
CACTGATGTCCTTGATGCCG+TGG | 0.559728 | 4.3:-89334819 | MS.gene034303:CDS |
GCCACACTGATGACAAGGAC+CGG | 0.560747 | 4.3:+89335136 | None:intergenic |
ACCAATGGCAAATCCTTTGG+TGG | 0.560777 | 4.3:+89334778 | None:intergenic |
ACCAGGTCAGCAATAACAGC+AGG | 0.562238 | 4.3:+89337120 | None:intergenic |
AGCACTAAACAGAAGGAAAG+AGG | 0.562509 | 4.3:+89334742 | None:intergenic |
CTACAGATAGCTACTCGAGC+AGG | 0.562784 | 4.3:-89337873 | MS.gene034303:intron |
GCCATACGAGATGGAGCTGA+AGG | 0.564432 | 4.3:-89338329 | MS.gene034303:CDS |
TCAAATGAGTGAACAACAAG+AGG | 0.566209 | 4.3:+89335741 | None:intergenic |
TCGCTATATATCTTATGAAG+TGG | 0.566771 | 4.3:-89338507 | MS.gene034303:CDS |
TCAACAGGAAGCTTCTGGCA+TGG | 0.567106 | 4.3:-89338213 | MS.gene034303:CDS |
AAACAGGAAACCCAACTGGC+GGG | 0.567211 | 4.3:-89335066 | MS.gene034303:CDS |
TTGTGTTACCCACGGCATCA+AGG | 0.567332 | 4.3:+89334810 | None:intergenic |
GATCTGGTAGTTTCATCTGT+GGG | 0.570293 | 4.3:-89335720 | MS.gene034303:CDS |
AAGGTTTAGAACGCATGTTA+GGG | 0.570693 | 4.3:+89338769 | None:intergenic |
CAAGGACATCAGTGATCTCT+CGG | 0.571210 | 4.3:+89334828 | None:intergenic |
GATGAAGATATCATGGAGAC+CGG | 0.572678 | 4.3:-89338819 | MS.gene034303:CDS |
GGCCCGATAGCTGATAATGC+TGG | 0.573393 | 4.3:-89334971 | MS.gene034303:CDS |
ACCAACGAAAACTTCTGGAA+TGG | 0.573408 | 4.3:+89334560 | None:intergenic |
GGGCACACCTGGTTCAATGA+AGG | 0.573827 | 4.3:-89337766 | MS.gene034303:CDS |
CCTTTCTGAAGAATTGCCAT+AGG | 0.576305 | 4.3:+89335642 | None:intergenic |
CACCAAATCCATATCCAACT+AGG | 0.578407 | 4.3:+89337262 | None:intergenic |
TAATTACTCTGCAGTCTACC+CGG | 0.578663 | 4.3:-89335375 | MS.gene034303:intron |
TAATTGCTGGGGTTAGTTTG+GGG | 0.579268 | 4.3:-89335177 | MS.gene034303:CDS |
TACTAAAGCAGCTGATGTTG+GGG | 0.579700 | 4.3:-89337196 | MS.gene034303:CDS |
ATAGCTGATGCCATACGAGA+TGG | 0.580045 | 4.3:-89338338 | MS.gene034303:CDS |
CCTATGGCAATTCTTCAGAA+AGG | 0.580609 | 4.3:-89335642 | MS.gene034303:CDS |
TGATCTGGTAGTTTCATCTG+TGG | 0.580925 | 4.3:-89335721 | MS.gene034303:CDS |
GGAAACAAGATGAAGCCAGA+TGG | 0.582999 | 4.3:+89335762 | None:intergenic |
CCATATCCAACTAGGAGAAG+AGG | 0.583079 | 4.3:+89337270 | None:intergenic |
CCATGTAAGCACTAAACAGA+AGG | 0.583611 | 4.3:+89334735 | None:intergenic |
CTTACTCGGGGCTAAAGTTG+TGG | 0.584208 | 4.3:-89333418 | MS.gene034303:CDS |
TGTTGGCCGAACTGCACAGG+AGG | 0.585269 | 4.3:-89334484 | MS.gene034303:CDS |
TTTATAAGTACATGAAGTGA+AGG | 0.589437 | 4.3:+89332940 | None:intergenic |
AGCACTAGAGACTCTGACGT+TGG | 0.590025 | 4.3:+89338007 | None:intergenic |
ATTAACCTGAACCATTTCAG+GGG | 0.591314 | 4.3:+89338462 | None:intergenic |
GCTCAACATAAAGTAACCAC+CGG | 0.591571 | 4.3:+89335356 | None:intergenic |
CAATCGCCACACTGATGACA+AGG | 0.592155 | 4.3:+89335131 | None:intergenic |
GTGGGTGCTCGCTAAAGATG+AGG | 0.592519 | 4.3:-89338488 | MS.gene034303:CDS |
AGGTTGTTAATGAAGTAAGA+AGG | 0.592583 | 4.3:-89334464 | MS.gene034303:CDS |
GACCCATTCAAAGACACTGC+TGG | 0.592957 | 4.3:-89332964 | MS.gene034303:CDS |
ATCCAGCAAAACCTGAACAA+AGG | 0.593209 | 4.3:+89338057 | None:intergenic |
ACAACTTTAGCCCCGAGTAA+GGG | 0.593448 | 4.3:+89333420 | None:intergenic |
CAGCAATTATGTTAGTGCCA+TGG | 0.596187 | 4.3:+89335191 | None:intergenic |
GCACTGTTTGCTCAGTTGGG+TGG | 0.600069 | 4.3:-89337228 | MS.gene034303:CDS |
TTCTAAGGTTGGAGACAATG+TGG | 0.602278 | 4.3:-89335988 | MS.gene034303:intron |
GAAAGAGCTAATGTGCGCAC+AGG | 0.602469 | 4.3:+89335226 | None:intergenic |
GCAAAATTGAACCATGCTGA+AGG | 0.604191 | 4.3:+89335328 | None:intergenic |
CTGTGCAGTTCGGCCAACAG+CGG | 0.608968 | 4.3:+89334488 | None:intergenic |
AGGAAGCTTCTGGCATGGGA+AGG | 0.613106 | 4.3:-89338208 | MS.gene034303:intron |
ACTAAAGACAAATATAAGCA+TGG | 0.615466 | 4.3:+89334524 | None:intergenic |
GTATGGAACTATATCCAAGA+TGG | 0.620046 | 4.3:-89338291 | MS.gene034303:CDS |
TTGAGCAAGCACCTTCAGCA+TGG | 0.620246 | 4.3:-89335339 | MS.gene034303:CDS |
TAAGAAGGCAGTTCATTGAG+AGG | 0.623441 | 4.3:-89334449 | MS.gene034303:CDS |
GCACAACGCTGTAAAATCGA+AGG | 0.623843 | 4.3:-89335882 | MS.gene034303:intron |
GAGTCTCTAGTGCTGCGAGA+CGG | 0.624351 | 4.3:-89337998 | MS.gene034303:CDS |
GATGCTCTCAACGATTACAT+TGG | 0.626481 | 4.3:-89332917 | MS.gene034303:CDS |
TCTAAGGTTGGAGACAATGT+GGG | 0.628132 | 4.3:-89335987 | MS.gene034303:intron |
AGCAGTCTGTCCCAGCCAGT+AGG | 0.628575 | 4.3:+89335102 | None:intergenic |
TATCGGGCCAAACATATCCA+TGG | 0.628672 | 4.3:+89334985 | None:intergenic |
TCAGTGACCTTCATTGAACC+AGG | 0.631148 | 4.3:+89337759 | None:intergenic |
CTTGTTGGAAAAGTAGAACA+GGG | 0.631174 | 4.3:-89337168 | MS.gene034303:CDS |
AAAAGATAGCTCCAAAGCCG+AGG | 0.633559 | 4.3:+89338596 | None:intergenic |
CGAGGAGTAAAAGAATGAAG+AGG | 0.633805 | 4.3:+89338614 | None:intergenic |
ACAACCAAAGCCACCACCAA+AGG | 0.636877 | 4.3:-89334791 | MS.gene034303:CDS |
TGGGTGCTCGCTAAAGATGA+GGG | 0.637313 | 4.3:-89338487 | MS.gene034303:CDS |
AGCAAACAGTGCAACAAAGG+AGG | 0.638258 | 4.3:+89337239 | None:intergenic |
TCCCAGCCAAACATAAAATG+TGG | 0.638868 | 4.3:+89337791 | None:intergenic |
TGCGAGACGGTCTTCAAGAG+AGG | 0.642215 | 4.3:-89337985 | MS.gene034303:CDS |
ACTGATGTCCTTGATGCCGT+GGG | 0.654794 | 4.3:-89334818 | MS.gene034303:CDS |
CTCAACATAAAGTAACCACC+GGG | 0.655219 | 4.3:+89335357 | None:intergenic |
TTAAGAGAGATGATAAAACC+TGG | 0.656352 | 4.3:-89334263 | MS.gene034303:CDS |
ATTGCCATAGGATCTTCCAT+AGG | 0.659545 | 4.3:+89335654 | None:intergenic |
GAAACAGGAAACCCAACTGG+CGG | 0.663662 | 4.3:-89335067 | MS.gene034303:CDS |
AATCAGTGCCATGATACTAG+GGG | 0.667370 | 4.3:-89335913 | MS.gene034303:CDS |
CAGATAGCTACTCGAGCAGG+TGG | 0.668716 | 4.3:-89337870 | MS.gene034303:CDS |
GTGGGAGATTGTGCTGCTAG+AGG | 0.672732 | 4.3:-89335969 | MS.gene034303:CDS |
CCGATAGCTGATAATGCTGG+AGG | 0.682452 | 4.3:-89334968 | MS.gene034303:CDS |
TACAGGGCAACCCTTACTCG+GGG | 0.682668 | 4.3:-89333430 | MS.gene034303:CDS |
TGGCACTAACATAATTGCTG+GGG | 0.685344 | 4.3:-89335188 | MS.gene034303:CDS |
TCCGGTCCTTGTCATCAGTG+TGG | 0.685748 | 4.3:-89335137 | MS.gene034303:CDS |
TTAACCTGAACCATTTCAGG+GGG | 0.686083 | 4.3:+89338463 | None:intergenic |
CATGGTAAGAATATAAGCAG+CGG | 0.698682 | 4.3:+89335003 | None:intergenic |
ATCAGTGCCATGATACTAGG+GGG | 0.707686 | 4.3:-89335912 | MS.gene034303:CDS |
TCATAAGATATATAGCGACA+AGG | 0.717379 | 4.3:+89338512 | None:intergenic |
TTACTCTGCAGTCTACCCGG+TGG | 0.731661 | 4.3:-89335372 | MS.gene034303:intron |
GATGATAATACCTACCAGGG+GGG | 0.785251 | 4.3:+89338743 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AACTTATTTATTATAATGAA+TGG | - | chr4.3:89334006-89334025 | MS.gene034303:intron | 10.0% |
!! | TCATTTATGATATTTAAATT+TGG | - | chr4.3:89336157-89336176 | MS.gene034303:intron | 10.0% |
!! | TTCATTATAATAAATAAGTT+CGG | + | chr4.3:89334006-89334025 | None:intergenic | 10.0% |
!!! | GAATTTTTAAAATCAAAATA+AGG | - | chr4.3:89334750-89334769 | MS.gene034303:CDS | 10.0% |
!! | AAATAATTGATATACATACA+CGG | - | chr4.3:89335539-89335558 | MS.gene034303:intron | 15.0% |
!! | AAATTTCAAATATAACAGTA+TGG | + | chr4.3:89336825-89336844 | None:intergenic | 15.0% |
!! | CTCATAAAATTATAAACATA+AGG | - | chr4.3:89335585-89335604 | MS.gene034303:intron | 15.0% |
!! | TAATAAGAAATTTAACAGTA+TGG | - | chr4.3:89335383-89335402 | MS.gene034303:intron | 15.0% |
!! | TACTGTTAAATTTCTTATTA+TGG | + | chr4.3:89335383-89335402 | None:intergenic | 15.0% |
!! | TCATTATAATAAATAAGTTC+GGG | + | chr4.3:89334005-89334024 | None:intergenic | 15.0% |
!!! | ATCTGTTAATAGTATATTTT+TGG | - | chr4.3:89338182-89338201 | MS.gene034303:intron | 15.0% |
!!! | TAAAATTTTAATGCAATTGA+GGG | - | chr4.3:89337079-89337098 | MS.gene034303:intron | 15.0% |
!!! | TTAAAATTTTAATGCAATTG+AGG | - | chr4.3:89337078-89337097 | MS.gene034303:intron | 15.0% |
!!! | TTAATAGTATATTTTTGGTA+TGG | - | chr4.3:89338187-89338206 | MS.gene034303:intron | 15.0% |
!!! | TTATTTTTATTTTACAGAGT+GGG | - | chr4.3:89338731-89338750 | MS.gene034303:intron | 15.0% |
!!! | TTTATTTTTATTTTACAGAG+TGG | - | chr4.3:89338730-89338749 | MS.gene034303:intron | 15.0% |
!!! | TTTTCTGTTTATAATTTATG+TGG | - | chr4.3:89335624-89335643 | MS.gene034303:CDS | 15.0% |
!! | AACTTTCTTTCAGTTAATAT+AGG | + | chr4.3:89333826-89333845 | None:intergenic | 20.0% |
!! | AGGTATATTATAATAAACAC+TGG | + | chr4.3:89338654-89338673 | None:intergenic | 20.0% |
!! | ATATTACTCTAAATTGTCAT+AGG | + | chr4.3:89338534-89338553 | None:intergenic | 20.0% |
!! | ATCTAGAAAGTAATATGATA+AGG | + | chr4.3:89333363-89333382 | None:intergenic | 20.0% |
!! | CATAATATCTTCAATATTCT+TGG | + | chr4.3:89335499-89335518 | None:intergenic | 20.0% |
!! | CATTATAATAAATAAGTTCG+GGG | + | chr4.3:89334004-89334023 | None:intergenic | 20.0% |
!! | TAAAATTATAAACATAAGGC+AGG | - | chr4.3:89335589-89335608 | MS.gene034303:intron | 20.0% |
!! | TGAAATAAAAATATCTCCAA+TGG | + | chr4.3:89335436-89335455 | None:intergenic | 20.0% |
!! | TTATTTGGATAGTTATTGAA+TGG | + | chr4.3:89335285-89335304 | None:intergenic | 20.0% |
!!! | ATATTGTGTTAAATTTCTAG+AGG | - | chr4.3:89337675-89337694 | MS.gene034303:intron | 20.0% |
!!! | ATTTTAATAGCCTAATAAGA+TGG | + | chr4.3:89337065-89337084 | None:intergenic | 20.0% |
!!! | GTTATATTTGAAATTTCTCA+TGG | - | chr4.3:89336829-89336848 | MS.gene034303:intron | 20.0% |
!!! | TCAACATTTATACAAGTTTT+GGG | - | chr4.3:89337581-89337600 | MS.gene034303:intron | 20.0% |
!!! | TGAAAATGATATACATCTTT+TGG | + | chr4.3:89334222-89334241 | None:intergenic | 20.0% |
!!! | TTCAACATTTATACAAGTTT+TGG | - | chr4.3:89337580-89337599 | MS.gene034303:intron | 20.0% |
!!! | TTTTAATAGCCTAATAAGAT+GGG | + | chr4.3:89337064-89337083 | None:intergenic | 20.0% |
!!! | TTTTATGAACAAATTGAGAA+AGG | + | chr4.3:89335322-89335341 | None:intergenic | 20.0% |
! | AAACATAAAATGTGGCATAA+AGG | + | chr4.3:89333923-89333942 | None:intergenic | 25.0% |
! | AAAGCAATAAAGAGACAATA+TGG | + | chr4.3:89335879-89335898 | None:intergenic | 25.0% |
! | AAATGGAAAAATAGTTTGGA+AGG | + | chr4.3:89334115-89334134 | None:intergenic | 25.0% |
! | AAATGTAACAAACCTAAGTT+TGG | + | chr4.3:89338224-89338243 | None:intergenic | 25.0% |
! | AAATTCAACAAACTATCCTA+TGG | + | chr4.3:89334736-89334755 | None:intergenic | 25.0% |
! | AACAACAAATGCAAATATCT+AGG | + | chr4.3:89334934-89334953 | None:intergenic | 25.0% |
! | AAGATGGGAAATTCAAAAAT+GGG | + | chr4.3:89333024-89333043 | None:intergenic | 25.0% |
! | AATGTCATAATTGAACAACA+AGG | + | chr4.3:89338505-89338524 | None:intergenic | 25.0% |
! | ACTAAAGACAAATATAAGCA+TGG | + | chr4.3:89337198-89337217 | None:intergenic | 25.0% |
! | AGAAAAACAGAATATATCAC+AGG | + | chr4.3:89338674-89338693 | None:intergenic | 25.0% |
! | AGGTGTGAAATAATTTGAAA+AGG | + | chr4.3:89336300-89336319 | None:intergenic | 25.0% |
! | AGTATGGAAAATATTTGTTC+TGG | + | chr4.3:89336809-89336828 | None:intergenic | 25.0% |
! | AGTTATTGAATGGTTATAAG+AGG | + | chr4.3:89335275-89335294 | None:intergenic | 25.0% |
! | ATAAAGTATGTGATAGAAAC+TGG | - | chr4.3:89335031-89335050 | MS.gene034303:CDS | 25.0% |
! | GAAAAACAAGTAGTAATCTA+TGG | + | chr4.3:89334707-89334726 | None:intergenic | 25.0% |
! | GAAATATGCAATTTCTGTTT+AGG | - | chr4.3:89336251-89336270 | MS.gene034303:intron | 25.0% |
! | GCTAGATAAATAGAAAAACT+CGG | + | chr4.3:89337812-89337831 | None:intergenic | 25.0% |
! | GTTATTGAATGGTTATAAGA+GGG | + | chr4.3:89335274-89335293 | None:intergenic | 25.0% |
! | TAAAAATCAAATAGAGAGAG+AGG | + | chr4.3:89334406-89334425 | None:intergenic | 25.0% |
! | TACCAAATGGAAAAATAGTT+TGG | + | chr4.3:89334119-89334138 | None:intergenic | 25.0% |
! | TAGATGCAAATGAATATTTG+TGG | - | chr4.3:89337624-89337643 | MS.gene034303:intron | 25.0% |
! | TATATTTGTCTTTAGTGCTT+GGG | - | chr4.3:89337202-89337221 | MS.gene034303:CDS | 25.0% |
! | TGAGTACTATTATGTTTCAT+TGG | - | chr4.3:89334082-89334101 | MS.gene034303:intron | 25.0% |
! | TTATATTTGTCTTTAGTGCT+TGG | - | chr4.3:89337201-89337220 | MS.gene034303:CDS | 25.0% |
! | TTTATAAGTACATGAAGTGA+AGG | + | chr4.3:89338782-89338801 | None:intergenic | 25.0% |
!! | AAAAGGTTGAAGATATTTTG+TGG | + | chr4.3:89336283-89336302 | None:intergenic | 25.0% |
!! | AATTACATTGACGTTTTACA+TGG | - | chr4.3:89334820-89334839 | MS.gene034303:CDS | 25.0% |
!! | TTTATGCCACATTTTATGTT+TGG | - | chr4.3:89333922-89333941 | MS.gene034303:intron | 25.0% |
!! | TTTTACATGGTCATATTTGA+AGG | - | chr4.3:89334833-89334852 | MS.gene034303:CDS | 25.0% |
!!! | AATGAATCATGAACTAGTTT+TGG | - | chr4.3:89337766-89337785 | MS.gene034303:CDS | 25.0% |
!!! | ATGATTCTGTTTTGATTCTA+AGG | - | chr4.3:89335716-89335735 | MS.gene034303:CDS | 25.0% |
!!! | ATTACTACTTGTTTTTCTCA+GGG | - | chr4.3:89334710-89334729 | MS.gene034303:CDS | 25.0% |
!!! | CAATTGTTGTTTACTTCATT+TGG | - | chr4.3:89334629-89334648 | MS.gene034303:intron | 25.0% |
!!! | CATTTTATTTTATCACTTGC+AGG | - | chr4.3:89338239-89338258 | MS.gene034303:CDS | 25.0% |
!!! | GATATTTTTATGCCAAACTT+AGG | - | chr4.3:89338209-89338228 | MS.gene034303:CDS | 25.0% |
!!! | TATTTGCATTTGTTGTTTTG+TGG | - | chr4.3:89334937-89334956 | MS.gene034303:intron | 25.0% |
!!! | TTCCAAACTATTTTTCCATT+TGG | - | chr4.3:89334114-89334133 | MS.gene034303:intron | 25.0% |
!!! | TTGGCTTTTTTAAGTTATCT+GGG | - | chr4.3:89336176-89336195 | MS.gene034303:intron | 25.0% |
!!! | TTTGGCTTTTTTAAGTTATC+TGG | - | chr4.3:89336175-89336194 | MS.gene034303:intron | 25.0% |
!!! | TTTTTCATTTTTCTATGACC+TGG | - | chr4.3:89338148-89338167 | MS.gene034303:intron | 25.0% |
AAACAGTTAGCTGATATCTA+AGG | + | chr4.3:89338120-89338139 | None:intergenic | 30.0% | |
AACAAATTGAGAAAGGAAAG+AGG | + | chr4.3:89335315-89335334 | None:intergenic | 30.0% | |
AATCATACACACTTACCAAA+TGG | + | chr4.3:89334132-89334151 | None:intergenic | 30.0% | |
AATGCAAATATCTAGGTCTT+AGG | + | chr4.3:89334927-89334946 | None:intergenic | 30.0% | |
ACAACAATTGAACAATTACC+AGG | + | chr4.3:89334619-89334638 | None:intergenic | 30.0% | |
AGATGGGAAATTCAAAAATG+GGG | + | chr4.3:89333023-89333042 | None:intergenic | 30.0% | |
AGGTTGTTAATGAAGTAAGA+AGG | - | chr4.3:89337255-89337274 | MS.gene034303:CDS | 30.0% | |
ATACTTTCTACAGGATTACA+AGG | - | chr4.3:89337386-89337405 | MS.gene034303:intron | 30.0% | |
ATAGAAACTGGTGTCTATAT+TGG | - | chr4.3:89335043-89335062 | MS.gene034303:CDS | 30.0% | |
ATATTACTAGTGAAACCTGT+GGG | - | chr4.3:89337552-89337571 | MS.gene034303:intron | 30.0% | |
ATCATTTCACCTATTGTAGT+TGG | - | chr4.3:89337489-89337508 | MS.gene034303:intron | 30.0% | |
ATTCTTACCATGGATATGTT+TGG | - | chr4.3:89336727-89336746 | MS.gene034303:intron | 30.0% | |
CAGATATTTCGTATTCTACT+CGG | - | chr4.3:89333067-89333086 | MS.gene034303:intron | 30.0% | |
CGCTATATATCTTATGAAGT+GGG | - | chr4.3:89333213-89333232 | MS.gene034303:intron | 30.0% | |
CTATCACATACTTTATTCTC+TGG | + | chr4.3:89335027-89335046 | None:intergenic | 30.0% | |
CTTAAACTTACCATTATACC+AGG | + | chr4.3:89337296-89337315 | None:intergenic | 30.0% | |
CTTGTAGTCAGTATAATACT+TGG | + | chr4.3:89336467-89336486 | None:intergenic | 30.0% | |
GAAAGTAATATGATAAGGTC+AGG | + | chr4.3:89333358-89333377 | None:intergenic | 30.0% | |
GAAGATGGGAAATTCAAAAA+TGG | + | chr4.3:89333025-89333044 | None:intergenic | 30.0% | |
GTGATGACAAAGACAATAAT+TGG | + | chr4.3:89333169-89333188 | None:intergenic | 30.0% | |
GTGTCTATATTGGTAAGTTT+AGG | - | chr4.3:89335053-89335072 | MS.gene034303:CDS | 30.0% | |
GTTGTTTACTTCATTTGGAA+GGG | - | chr4.3:89334634-89334653 | MS.gene034303:intron | 30.0% | |
TAAACAGTAAGAGCAATAGA+AGG | + | chr4.3:89336320-89336339 | None:intergenic | 30.0% | |
TAAGATGATAATACCTACCA+GGG | + | chr4.3:89332982-89333001 | None:intergenic | 30.0% | |
TAGCAGTAAAGACAAAATCA+TGG | + | chr4.3:89334340-89334359 | None:intergenic | 30.0% | |
TATATTACTAGTGAAACCTG+TGG | - | chr4.3:89337551-89337570 | MS.gene034303:intron | 30.0% | |
TATGGGATTTATCACTTCTA+TGG | - | chr4.3:89334968-89334987 | MS.gene034303:CDS | 30.0% | |
TATTAACCTGAACCATTTCA+GGG | + | chr4.3:89333261-89333280 | None:intergenic | 30.0% | |
TCAGCTAACTATGATAAAAC+TGG | + | chr4.3:89334265-89334284 | None:intergenic | 30.0% | |
TCATAAGATATATAGCGACA+AGG | + | chr4.3:89333210-89333229 | None:intergenic | 30.0% | |
TCGCTATATATCTTATGAAG+TGG | - | chr4.3:89333212-89333231 | MS.gene034303:intron | 30.0% | |
TCTCTCATACATTCTATTTC+AGG | - | chr4.3:89333595-89333614 | MS.gene034303:intron | 30.0% | |
TCTGAAAACATGATTATTGC+AGG | - | chr4.3:89337127-89337146 | MS.gene034303:CDS | 30.0% | |
TGCATCTAATGTGATGATTA+TGG | + | chr4.3:89337612-89337631 | None:intergenic | 30.0% | |
TGCTATTAACAATGTACTAG+TGG | + | chr4.3:89337880-89337899 | None:intergenic | 30.0% | |
TTAAGAGAGATGATAAAACC+TGG | - | chr4.3:89337456-89337475 | MS.gene034303:intron | 30.0% | |
TTATCATAGTTAGCTGAAGT+GGG | - | chr4.3:89334268-89334287 | MS.gene034303:CDS | 30.0% | |
TTCTTGATTATGAACTCTTC+AGG | - | chr4.3:89337837-89337856 | MS.gene034303:CDS | 30.0% | |
TTTAATGCAATTGAGGGAAA+AGG | - | chr4.3:89337085-89337104 | MS.gene034303:intron | 30.0% | |
TTTATCATAGTTAGCTGAAG+TGG | - | chr4.3:89334267-89334286 | MS.gene034303:CDS | 30.0% | |
TTTGGTAAGTGTGTATGATT+TGG | - | chr4.3:89334132-89334151 | MS.gene034303:intron | 30.0% | |
! | ATGATTTTGTCTTTACTGCT+AGG | - | chr4.3:89334339-89334358 | MS.gene034303:intron | 30.0% |
! | CATGATGACTGTTTGATAAT+TGG | - | chr4.3:89333310-89333329 | MS.gene034303:CDS | 30.0% |
! | CTATCTTTGCTGTACAATTA+TGG | - | chr4.3:89338568-89338587 | MS.gene034303:CDS | 30.0% |
! | CTGTGGGAATATTTTCTATT+CGG | - | chr4.3:89336015-89336034 | MS.gene034303:intron | 30.0% |
! | TGAATATTTGTGGCTATTTC+AGG | - | chr4.3:89337634-89337653 | MS.gene034303:intron | 30.0% |
! | TGATTTTGTCTTTACTGCTA+GGG | - | chr4.3:89334340-89334359 | MS.gene034303:intron | 30.0% |
! | TGTGGGAATATTTTCTATTC+GGG | - | chr4.3:89336016-89336035 | MS.gene034303:intron | 30.0% |
! | TGTTGTTTACTTCATTTGGA+AGG | - | chr4.3:89334633-89334652 | MS.gene034303:intron | 30.0% |
! | TTTCTTGGAAGGGAATTTTT+CGG | + | chr4.3:89335204-89335223 | None:intergenic | 30.0% |
! | TTTTCACTATTCAGCTTTTG+TGG | - | chr4.3:89338628-89338647 | MS.gene034303:CDS | 30.0% |
!! | AGGTTTTGTATTCCGAATTT+TGG | - | chr4.3:89338259-89338278 | MS.gene034303:CDS | 30.0% |
!! | GATTACTACTTGTTTTTCTC+AGG | - | chr4.3:89334709-89334728 | MS.gene034303:CDS | 30.0% |
!! | GGTTTTGTATTCCGAATTTT+GGG | - | chr4.3:89338260-89338279 | MS.gene034303:CDS | 30.0% |
!! | GTTCATGATTCATTGATTTG+AGG | + | chr4.3:89337760-89337779 | None:intergenic | 30.0% |
!! | TAAGGCATTTTCCATAAAGT+TGG | + | chr4.3:89338102-89338121 | None:intergenic | 30.0% |
!! | TTGAAGGTGTTAATGTTAGA+CGG | - | chr4.3:89334849-89334868 | MS.gene034303:intron | 30.0% |
!! | TTTGGAGCTATCTTTTACAT+GGG | - | chr4.3:89333130-89333149 | MS.gene034303:intron | 30.0% |
!!! | GGTGATTTTTTATCTGTGTA+TGG | - | chr4.3:89334153-89334172 | MS.gene034303:intron | 30.0% |
!!! | GTCTCTTTATTGCTTTGTTT+TGG | - | chr4.3:89335883-89335902 | MS.gene034303:CDS | 30.0% |
!!! | TACAATAGTTTTAGCTGTTC+TGG | - | chr4.3:89336109-89336128 | MS.gene034303:intron | 30.0% |
!!! | TTCTGTTTTGATTCTAAGGT+TGG | - | chr4.3:89335720-89335739 | MS.gene034303:CDS | 30.0% |
AAACATGTAAGGAGGAAGAT+GGG | + | chr4.3:89333039-89333058 | None:intergenic | 35.0% | |
AAATGTTGAATTTCTCCCAC+AGG | + | chr4.3:89337570-89337589 | None:intergenic | 35.0% | |
AACAGTGTCTGGTATTCTTA+TGG | - | chr4.3:89338343-89338362 | MS.gene034303:intron | 35.0% | |
AAGAGACAATATGGAGTAAC+TGG | + | chr4.3:89335870-89335889 | None:intergenic | 35.0% | |
AAGATGATAATACCTACCAG+GGG | + | chr4.3:89332981-89333000 | None:intergenic | 35.0% | |
AAGGAAGCTGAGAATACAAA+TGG | + | chr4.3:89333191-89333210 | None:intergenic | 35.0% | |
AAGTTCTTGGACCAACTTTA+TGG | - | chr4.3:89338088-89338107 | MS.gene034303:CDS | 35.0% | |
AATTGTAGAAATGAGTCAGC+AGG | - | chr4.3:89336774-89336793 | MS.gene034303:intron | 35.0% | |
ACAGAAAGAAGCAAACACAA+AGG | + | chr4.3:89335650-89335669 | None:intergenic | 35.0% | |
ACGACTTTGATACTTTCTAC+AGG | - | chr4.3:89337377-89337396 | MS.gene034303:intron | 35.0% | |
ACTGGATACAGAACACATTT+AGG | + | chr4.3:89334247-89334266 | None:intergenic | 35.0% | |
AGAGACAATATGGAGTAACT+GGG | + | chr4.3:89335869-89335888 | None:intergenic | 35.0% | |
ATAATCAGTGCCATGATACT+AGG | - | chr4.3:89335804-89335823 | MS.gene034303:intron | 35.0% | |
ATACTAAAGCAGCTGATGTT+GGG | - | chr4.3:89334522-89334541 | MS.gene034303:CDS | 35.0% | |
ATATAGTTCCATACTGTGTC+CGG | + | chr4.3:89333422-89333441 | None:intergenic | 35.0% | |
ATGGCACTAACATAATTGCT+GGG | - | chr4.3:89336530-89336549 | MS.gene034303:intron | 35.0% | |
ATTAACCTGAACCATTTCAG+GGG | + | chr4.3:89333260-89333279 | None:intergenic | 35.0% | |
ATTGATGCTTATGTCAATCC+AGG | - | chr4.3:89334677-89334696 | MS.gene034303:intron | 35.0% | |
CAATAACAGCAGGATTTCTA+GGG | + | chr4.3:89334592-89334611 | None:intergenic | 35.0% | |
CAGAAATCAAACATGTAAGG+AGG | + | chr4.3:89333047-89333066 | None:intergenic | 35.0% | |
CAGAATCATTATGATACCAC+TGG | + | chr4.3:89335705-89335724 | None:intergenic | 35.0% | |
CATGGTAAGAATATAAGCAG+CGG | + | chr4.3:89336719-89336738 | None:intergenic | 35.0% | |
CTAATAGAACACAGTATGCT+TGG | + | chr4.3:89336206-89336225 | None:intergenic | 35.0% | |
CTCAACGATTACATTGGTAA+TGG | - | chr4.3:89338808-89338827 | MS.gene034303:CDS | 35.0% | |
CTGCAGAAATCAAACATGTA+AGG | + | chr4.3:89333050-89333069 | None:intergenic | 35.0% | |
CTGGATACAGAACACATTTA+GGG | + | chr4.3:89334246-89334265 | None:intergenic | 35.0% | |
CTGTATAGTAGCCCAAAATT+CGG | + | chr4.3:89338274-89338293 | None:intergenic | 35.0% | |
CTTATTGTAGAGATGTCCAT+TGG | - | chr4.3:89335417-89335436 | MS.gene034303:intron | 35.0% | |
CTTGTTGGAAAAGTAGAACA+GGG | - | chr4.3:89334551-89334570 | MS.gene034303:CDS | 35.0% | |
GAAAGAGGAAACTGGTTATT+TGG | + | chr4.3:89335300-89335319 | None:intergenic | 35.0% | |
GAATAAAAGCCAAAAGATGC+AGG | + | chr4.3:89334378-89334397 | None:intergenic | 35.0% | |
GATGGGAAATTCAAAAATGG+GGG | + | chr4.3:89333022-89333041 | None:intergenic | 35.0% | |
GTAAACTCACCAACTACAAT+AGG | + | chr4.3:89337501-89337520 | None:intergenic | 35.0% | |
GTAAGATGATAATACCTACC+AGG | + | chr4.3:89332983-89333002 | None:intergenic | 35.0% | |
GTACTAGTGGAACAATTACA+AGG | + | chr4.3:89337867-89337886 | None:intergenic | 35.0% | |
GTATCAAAGTCGTTAACAGA+AGG | + | chr4.3:89337370-89337389 | None:intergenic | 35.0% | |
GTATGGAACTATATCCAAGA+TGG | - | chr4.3:89333428-89333447 | MS.gene034303:CDS | 35.0% | |
GTATTAACCTGAACCATTTC+AGG | + | chr4.3:89333262-89333281 | None:intergenic | 35.0% | |
TAATCAGTGCCATGATACTA+GGG | - | chr4.3:89335805-89335824 | MS.gene034303:intron | 35.0% | |
TAGATCTCTTCAATGCCAAA+AGG | + | chr4.3:89337913-89337932 | None:intergenic | 35.0% | |
TATACTAAAGCAGCTGATGT+TGG | - | chr4.3:89334521-89334540 | MS.gene034303:CDS | 35.0% | |
TCAAATGAGTGAACAACAAG+AGG | + | chr4.3:89335981-89336000 | None:intergenic | 35.0% | |
TCTGTCACTACTAAAGTTCT+TGG | - | chr4.3:89338075-89338094 | MS.gene034303:CDS | 35.0% | |
TGGATACAGAACACATTTAG+GGG | + | chr4.3:89334245-89334264 | None:intergenic | 35.0% | |
TGTTGTTCACTCATTTGATC+TGG | - | chr4.3:89335983-89336002 | MS.gene034303:CDS | 35.0% | |
TTATCAGCTCTTATCGTTGT+TGG | - | chr4.3:89333873-89333892 | MS.gene034303:intron | 35.0% | |
TTGATGCTTATGTCAATCCA+GGG | - | chr4.3:89334678-89334697 | MS.gene034303:intron | 35.0% | |
! | AAGGTTTAGAACGCATGTTA+GGG | + | chr4.3:89332953-89332972 | None:intergenic | 35.0% |
! | ACTGTAGCTTCTTTCCTTTT+AGG | - | chr4.3:89333636-89333655 | MS.gene034303:intron | 35.0% |
! | ATCACACAAGAAACTGACTT+AGG | - | chr4.3:89335151-89335170 | MS.gene034303:CDS | 35.0% |
! | ATGCTTTTCCTTGTTGCATT+TGG | - | chr4.3:89337983-89338002 | MS.gene034303:CDS | 35.0% |
! | CACTTCTATGGTCATTGTTT+TGG | - | chr4.3:89334980-89334999 | MS.gene034303:CDS | 35.0% |
! | CTCTTCATTCTTTTACTCCT+CGG | - | chr4.3:89333106-89333125 | MS.gene034303:intron | 35.0% |
! | GAATTTTGGGCTACTATACA+GGG | - | chr4.3:89338273-89338292 | MS.gene034303:CDS | 35.0% |
! | GTGGGAATATTTTCTATTCG+GGG | - | chr4.3:89336017-89336036 | MS.gene034303:intron | 35.0% |
! | GTTTTGTGGAAGAAGCTTAT+GGG | - | chr4.3:89334951-89334970 | MS.gene034303:CDS | 35.0% |
! | TAAGGTTTAGAACGCATGTT+AGG | + | chr4.3:89332954-89332973 | None:intergenic | 35.0% |
! | TAGCAGTTGTATACTCCTTT+TGG | - | chr4.3:89337895-89337914 | MS.gene034303:intron | 35.0% |
! | TGCTTTTCCTTGTTGCATTT+GGG | - | chr4.3:89337984-89338003 | MS.gene034303:CDS | 35.0% |
! | TGGTTCAATTTTGCTTTGTG+CGG | - | chr4.3:89336400-89336419 | MS.gene034303:intron | 35.0% |
! | TGTTTTGTGGAAGAAGCTTA+TGG | - | chr4.3:89334950-89334969 | MS.gene034303:CDS | 35.0% |
!! | ATAATTGCTGGGGTTAGTTT+GGG | - | chr4.3:89336541-89336560 | MS.gene034303:intron | 35.0% |
!! | TGAAGGTGTTAATGTTAGAC+GGG | - | chr4.3:89334850-89334869 | MS.gene034303:intron | 35.0% |
!!! | CTTTGGAGCTATCTTTTACA+TGG | - | chr4.3:89333129-89333148 | MS.gene034303:intron | 35.0% |
AACTCGGAGATAAGAGAGAT+AGG | + | chr4.3:89337796-89337815 | None:intergenic | 40.0% | |
AATCAGTGCCATGATACTAG+GGG | - | chr4.3:89335806-89335825 | MS.gene034303:intron | 40.0% | |
ACAGGATTACAAGGAGAAAC+CGG | - | chr4.3:89337395-89337414 | MS.gene034303:intron | 40.0% | |
ACCAAGACTCTCGAATTTCT+TGG | + | chr4.3:89335219-89335238 | None:intergenic | 40.0% | |
AGAACCAATGGCAAATCCTT+TGG | + | chr4.3:89336947-89336966 | None:intergenic | 40.0% | |
AGACTCTCGAATTTCTTGGA+AGG | + | chr4.3:89335215-89335234 | None:intergenic | 40.0% | |
AGATGATAATACCTACCAGG+GGG | + | chr4.3:89332980-89332999 | None:intergenic | 40.0% | |
AGCACTAAACAGAAGGAAAG+AGG | + | chr4.3:89336980-89336999 | None:intergenic | 40.0% | |
AGCTCTTATCGTTGTTGGTA+TGG | - | chr4.3:89333878-89333897 | MS.gene034303:intron | 40.0% | |
ATCCAGCAAAACCTGAACAA+AGG | + | chr4.3:89333665-89333684 | None:intergenic | 40.0% | |
ATCTGGACTAATGACTCCTA+TGG | - | chr4.3:89336049-89336068 | MS.gene034303:intron | 40.0% | |
ATGGAGCTGAAGGATTTATC+CGG | - | chr4.3:89333400-89333419 | MS.gene034303:CDS | 40.0% | |
ATTGCCATAGGATCTTCCAT+AGG | + | chr4.3:89336068-89336087 | None:intergenic | 40.0% | |
CAAACATGTAAGGAGGAAGA+TGG | + | chr4.3:89333040-89333059 | None:intergenic | 40.0% | |
CAATTTGAATGTGCAGAGTG+TGG | + | chr4.3:89334661-89334680 | None:intergenic | 40.0% | |
CACCAAATCCATATCCAACT+AGG | + | chr4.3:89334460-89334479 | None:intergenic | 40.0% | |
CAGCAATTATGTTAGTGCCA+TGG | + | chr4.3:89336531-89336550 | None:intergenic | 40.0% | |
CATGGCACTAACATAATTGC+TGG | - | chr4.3:89336529-89336548 | MS.gene034303:intron | 40.0% | |
CCATGTAAGCACTAAACAGA+AGG | + | chr4.3:89336987-89337006 | None:intergenic | 40.0% | |
CCATTCCTCTGCTTTAATAC+AGG | + | chr4.3:89335117-89335136 | None:intergenic | 40.0% | |
CCTATGGCAATTCTTCAGAA+AGG | - | chr4.3:89336077-89336096 | MS.gene034303:intron | 40.0% | |
CCTGTATTAAAGCAGAGGAA+TGG | - | chr4.3:89335114-89335133 | MS.gene034303:CDS | 40.0% | |
CCTTCTGTTTAGTGCTTACA+TGG | - | chr4.3:89336984-89337003 | MS.gene034303:intron | 40.0% | |
CCTTGTTGGAAAAGTAGAAC+AGG | - | chr4.3:89334550-89334569 | MS.gene034303:CDS | 40.0% | |
CGAGGAGTAAAAGAATGAAG+AGG | + | chr4.3:89333108-89333127 | None:intergenic | 40.0% | |
CGCTGCTTATATTCTTACCA+TGG | - | chr4.3:89336717-89336736 | MS.gene034303:intron | 40.0% | |
CTCAACATAAAGTAACCACC+GGG | + | chr4.3:89336365-89336384 | None:intergenic | 40.0% | |
CTCCTAGTTGGATATGGATT+TGG | - | chr4.3:89334455-89334474 | MS.gene034303:CDS | 40.0% | |
CTGCTTTAATACAGGATTGC+AGG | + | chr4.3:89335109-89335128 | None:intergenic | 40.0% | |
CTTAGGCACTAAGAACAGAT+TGG | - | chr4.3:89335168-89335187 | MS.gene034303:CDS | 40.0% | |
GACACTTTCAGGCTGATAAT+AGG | + | chr4.3:89336872-89336891 | None:intergenic | 40.0% | |
GACTCTCGAATTTCTTGGAA+GGG | + | chr4.3:89335214-89335233 | None:intergenic | 40.0% | |
GATCTGGTAGTTTCATCTGT+GGG | - | chr4.3:89335999-89336018 | MS.gene034303:intron | 40.0% | |
GATGAAGATATCATGGAGAC+CGG | - | chr4.3:89332900-89332919 | MS.gene034303:CDS | 40.0% | |
GATGATAAAACCTGGTGCTT+TGG | - | chr4.3:89337464-89337483 | MS.gene034303:intron | 40.0% | |
GATGCTCTCAACGATTACAT+TGG | - | chr4.3:89338802-89338821 | MS.gene034303:CDS | 40.0% | |
GCAAAATTGAACCATGCTGA+AGG | + | chr4.3:89336394-89336413 | None:intergenic | 40.0% | |
GCAATAACAGCAGGATTTCT+AGG | + | chr4.3:89334593-89334612 | None:intergenic | 40.0% | |
GCAATCCTGTATTAAAGCAG+AGG | - | chr4.3:89335109-89335128 | MS.gene034303:CDS | 40.0% | |
GCTCAACATAAAGTAACCAC+CGG | + | chr4.3:89336366-89336385 | None:intergenic | 40.0% | |
GCTGGACTAATAGATGAAAC+AGG | - | chr4.3:89336637-89336656 | MS.gene034303:intron | 40.0% | |
GTACTTCTTTGCATTATCCC+AGG | + | chr4.3:89338396-89338415 | None:intergenic | 40.0% | |
GTAGTAATCTATGGAAACCC+TGG | + | chr4.3:89334698-89334717 | None:intergenic | 40.0% | |
GTATTAAAGCAGAGGAATGG+TGG | - | chr4.3:89335117-89335136 | MS.gene034303:CDS | 40.0% | |
GTTCTGCACACCTGTTTAAA+AGG | + | chr4.3:89337036-89337055 | None:intergenic | 40.0% | |
GTTGTTGGTATGGCTGTAAT+CGG | - | chr4.3:89333888-89333907 | MS.gene034303:intron | 40.0% | |
GTTTAGTGCTTACATGGATG+AGG | - | chr4.3:89336990-89337009 | MS.gene034303:intron | 40.0% | |
TAAGAAGGCAGTTCATTGAG+AGG | - | chr4.3:89337270-89337289 | MS.gene034303:CDS | 40.0% | |
TAATTACTCTGCAGTCTACC+CGG | - | chr4.3:89336344-89336363 | MS.gene034303:intron | 40.0% | |
TACTAAAGCAGCTGATGTTG+GGG | - | chr4.3:89334523-89334542 | MS.gene034303:CDS | 40.0% | |
TATGATACCACTGGAAGTAG+AGG | + | chr4.3:89335696-89335715 | None:intergenic | 40.0% | |
TCCAAGAAATTCGAGAGTCT+TGG | - | chr4.3:89335215-89335234 | MS.gene034303:CDS | 40.0% | |
TCCAGCAAAACCTGAACAAA+GGG | + | chr4.3:89333664-89333683 | None:intergenic | 40.0% | |
TCCCAGCCAAACATAAAATG+TGG | + | chr4.3:89333931-89333950 | None:intergenic | 40.0% | |
TCTGTGTATGGATCTGATTG+TGG | - | chr4.3:89334165-89334184 | MS.gene034303:intron | 40.0% | |
TCTTCTGTTTCAGATCCATC+TGG | - | chr4.3:89335942-89335961 | MS.gene034303:CDS | 40.0% | |
TGAGAAAGGAAAGAGGAAAC+TGG | + | chr4.3:89335308-89335327 | None:intergenic | 40.0% | |
TGATCTGGTAGTTTCATCTG+TGG | - | chr4.3:89335998-89336017 | MS.gene034303:intron | 40.0% | |
TGGCACTAACATAATTGCTG+GGG | - | chr4.3:89336531-89336550 | MS.gene034303:intron | 40.0% | |
TTAACCTGAACCATTTCAGG+GGG | + | chr4.3:89333259-89333278 | None:intergenic | 40.0% | |
TTGTCTTTACTGCTAGGGAT+GGG | - | chr4.3:89334345-89334364 | MS.gene034303:intron | 40.0% | |
TTTAAACAGGTGTGCAGAAC+TGG | - | chr4.3:89337036-89337055 | MS.gene034303:intron | 40.0% | |
TTTCTATGACCTGGTCTGAT+TGG | - | chr4.3:89338157-89338176 | MS.gene034303:intron | 40.0% | |
TTTGTCTTTACTGCTAGGGA+TGG | - | chr4.3:89334344-89334363 | MS.gene034303:intron | 40.0% | |
! | ACCAACGAAAACTTCTGGAA+TGG | + | chr4.3:89337162-89337181 | None:intergenic | 40.0% |
! | ATTCCAGAAGTTTTCGTTGG+TGG | - | chr4.3:89337161-89337180 | MS.gene034303:CDS | 40.0% |
! | ATTCTTTTACTCCTCGGCTT+TGG | - | chr4.3:89333112-89333131 | MS.gene034303:intron | 40.0% |
! | ATTTTATGTTTGGCTGGGAG+TGG | - | chr4.3:89333932-89333951 | MS.gene034303:intron | 40.0% |
! | CAGGTTTTGCTGGATATGTA+GGG | - | chr4.3:89333670-89333689 | MS.gene034303:intron | 40.0% |
! | CCTTTCTGAAGAATTGCCAT+AGG | + | chr4.3:89336080-89336099 | None:intergenic | 40.0% |
! | CGAATTTTGGGCTACTATAC+AGG | - | chr4.3:89338272-89338291 | MS.gene034303:CDS | 40.0% |
! | GCAAAGAAGTACATAGAGAC+CGG | - | chr4.3:89338404-89338423 | MS.gene034303:intron | 40.0% |
! | GCCACATTTTATGTTTGGCT+GGG | - | chr4.3:89333927-89333946 | MS.gene034303:intron | 40.0% |
! | GGTTCAATTTTGCTTTGTGC+GGG | - | chr4.3:89336401-89336420 | MS.gene034303:intron | 40.0% |
! | TCACAGCGTACATTTTTGTC+TGG | - | chr4.3:89336437-89336456 | MS.gene034303:intron | 40.0% |
! | TCAGGTTTTGCTGGATATGT+AGG | - | chr4.3:89333669-89333688 | MS.gene034303:intron | 40.0% |
! | TCTAAGGTTGGAGACAATGT+GGG | - | chr4.3:89335732-89335751 | MS.gene034303:CDS | 40.0% |
! | TGCCACATTTTATGTTTGGC+TGG | - | chr4.3:89333926-89333945 | MS.gene034303:intron | 40.0% |
! | TTCCAGAAGTTTTCGTTGGT+GGG | - | chr4.3:89337162-89337181 | MS.gene034303:CDS | 40.0% |
! | TTCTCGCGAACCTTTTAAAC+AGG | - | chr4.3:89337023-89337042 | MS.gene034303:intron | 40.0% |
! | TTTTATGTTTGGCTGGGAGT+GGG | - | chr4.3:89333933-89333952 | MS.gene034303:intron | 40.0% |
!! | ACTAAGAACAGATTGGTCTG+CGG | - | chr4.3:89335175-89335194 | MS.gene034303:CDS | 40.0% |
!! | CATAATTGCTGGGGTTAGTT+TGG | - | chr4.3:89336540-89336559 | MS.gene034303:intron | 40.0% |
!! | CCTGTTCTACTTTTCCAACA+AGG | + | chr4.3:89334553-89334572 | None:intergenic | 40.0% |
!! | TAATTGCTGGGGTTAGTTTG+GGG | - | chr4.3:89336542-89336561 | MS.gene034303:intron | 40.0% |
!! | TTAGCTCTTTCTAGCTCTAC+TGG | - | chr4.3:89336505-89336524 | MS.gene034303:intron | 40.0% |
!! | TTCTAAGGTTGGAGACAATG+TGG | - | chr4.3:89335731-89335750 | MS.gene034303:CDS | 40.0% |
!!! | GTTTTAGCTGTTCTGGCATT+TGG | - | chr4.3:89336116-89336135 | MS.gene034303:intron | 40.0% |
AAAAGATAGCTCCAAAGCCG+AGG | + | chr4.3:89333126-89333145 | None:intergenic | 45.0% | |
AACAGATCACCAATCAGACC+AGG | + | chr4.3:89338169-89338188 | None:intergenic | 45.0% | |
AACCCACCAACGAAAACTTC+TGG | + | chr4.3:89337167-89337186 | None:intergenic | 45.0% | |
AAGCTTCCTGTTGAGGAGTT+GGG | + | chr4.3:89333500-89333519 | None:intergenic | 45.0% | |
AAGGTCAGGACAAGAGTTGA+TGG | + | chr4.3:89333344-89333363 | None:intergenic | 45.0% | |
AATGAGTCAGCAGGTAGTTC+TGG | - | chr4.3:89336783-89336802 | MS.gene034303:intron | 45.0% | |
AATGGCAAATCCTTTGGTGG+TGG | + | chr4.3:89336941-89336960 | None:intergenic | 45.0% | |
ACAACTTTAGCCCCGAGTAA+GGG | + | chr4.3:89338302-89338321 | None:intergenic | 45.0% | |
ACCAATGGCAAATCCTTTGG+TGG | + | chr4.3:89336944-89336963 | None:intergenic | 45.0% | |
ACCACCAAAGGATTTGCCAT+TGG | - | chr4.3:89336940-89336959 | MS.gene034303:intron | 45.0% | |
ACCTCTCTCTCATTCTTGGA+AGG | + | chr4.3:89335247-89335266 | None:intergenic | 45.0% | |
AGAGACCTCTCTCTCATTCT+TGG | + | chr4.3:89335251-89335270 | None:intergenic | 45.0% | |
AGCAAACAGTGCAACAAAGG+AGG | + | chr4.3:89334483-89334502 | None:intergenic | 45.0% | |
AGCAAGCAACATAGCCATCT+TGG | + | chr4.3:89333445-89333464 | None:intergenic | 45.0% | |
ATAGCTGATGCCATACGAGA+TGG | - | chr4.3:89333381-89333400 | MS.gene034303:CDS | 45.0% | |
ATCAGTGCCATGATACTAGG+GGG | - | chr4.3:89335807-89335826 | MS.gene034303:intron | 45.0% | |
CAAGGACATCAGTGATCTCT+CGG | + | chr4.3:89336894-89336913 | None:intergenic | 45.0% | |
CAGTTAGCCCAAATGCAACA+AGG | + | chr4.3:89337994-89338013 | None:intergenic | 45.0% | |
CATGATACTAGGGGGAACAA+TGG | - | chr4.3:89335815-89335834 | MS.gene034303:intron | 45.0% | |
CATTGAGAGGCCTGGTATAA+TGG | - | chr4.3:89337283-89337302 | MS.gene034303:intron | 45.0% | |
CATTGTTCCCCCTAGTATCA+TGG | + | chr4.3:89335817-89335836 | None:intergenic | 45.0% | |
CCATATCCAACTAGGAGAAG+AGG | + | chr4.3:89334452-89334471 | None:intergenic | 45.0% | |
CCTCCAGCATTATCAGCTAT+CGG | + | chr4.3:89336754-89336773 | None:intergenic | 45.0% | |
CCTCTCTCTCATTCTTGGAA+GGG | + | chr4.3:89335246-89335265 | None:intergenic | 45.0% | |
CCTCTTCTCCTAGTTGGATA+TGG | - | chr4.3:89334449-89334468 | MS.gene034303:CDS | 45.0% | |
CGCATGTTAGGGAAAGTTCT+TGG | + | chr4.3:89332942-89332961 | None:intergenic | 45.0% | |
CTCCAGCATTATCAGCTATC+GGG | + | chr4.3:89336753-89336772 | None:intergenic | 45.0% | |
CTGAGCAAACAGTGCAACAA+AGG | + | chr4.3:89334486-89334505 | None:intergenic | 45.0% | |
CTGATGTTTGCAACAGTGTC+TGG | - | chr4.3:89338332-89338351 | MS.gene034303:CDS | 45.0% | |
GACCAGCAGTGTCTTTGAAT+GGG | + | chr4.3:89338760-89338779 | None:intergenic | 45.0% | |
GACTCCTATGGAAGATCCTA+TGG | - | chr4.3:89336061-89336080 | MS.gene034303:intron | 45.0% | |
GATGAAACAGGAAACCCAAC+TGG | - | chr4.3:89336649-89336668 | MS.gene034303:intron | 45.0% | |
GATGATAATACCTACCAGGG+GGG | + | chr4.3:89332979-89332998 | None:intergenic | 45.0% | |
GCACAACGCTGTAAAATCGA+AGG | - | chr4.3:89335837-89335856 | MS.gene034303:intron | 45.0% | |
GCTCACAAAGCAGCAATAAC+AGG | - | chr4.3:89338452-89338471 | MS.gene034303:intron | 45.0% | |
GGAAACAAGATGAAGCCAGA+TGG | + | chr4.3:89335960-89335979 | None:intergenic | 45.0% | |
GGAAAGTTCTTGGCCTATCA+TGG | + | chr4.3:89332932-89332951 | None:intergenic | 45.0% | |
GGATTTATCCGGACACAGTA+TGG | - | chr4.3:89333411-89333430 | MS.gene034303:CDS | 45.0% | |
GTTGCACTGTTTGCTCAGTT+GGG | - | chr4.3:89334488-89334507 | MS.gene034303:CDS | 45.0% | |
TAACAACCTCCTGTGCAGTT+CGG | + | chr4.3:89337244-89337263 | None:intergenic | 45.0% | |
TATACAGGGCAACCCTTACT+CGG | - | chr4.3:89338287-89338306 | MS.gene034303:CDS | 45.0% | |
TATCGGGCCAAACATATCCA+TGG | + | chr4.3:89336737-89336756 | None:intergenic | 45.0% | |
TCAGTGACCTTCATTGAACC+AGG | + | chr4.3:89333963-89333982 | None:intergenic | 45.0% | |
TGCAATTGAGGGAAAAGGAG+AGG | - | chr4.3:89337090-89337109 | MS.gene034303:intron | 45.0% | |
TGCTGGATATGTAGGGATGT+GGG | - | chr4.3:89333677-89333696 | MS.gene034303:intron | 45.0% | |
TGTTGCACTGTTTGCTCAGT+TGG | - | chr4.3:89334487-89334506 | MS.gene034303:CDS | 45.0% | |
TTGCTGGATATGTAGGGATG+TGG | - | chr4.3:89333676-89333695 | MS.gene034303:intron | 45.0% | |
! | CTTTTTCTGAACACAGCTGG+TGG | - | chr4.3:89338368-89338387 | MS.gene034303:intron | 45.0% |
! | GAAATGATTGCCAAAGCACC+AGG | + | chr4.3:89337477-89337496 | None:intergenic | 45.0% |
! | GAACTGGCTCCCATCTTATT+AGG | - | chr4.3:89337052-89337071 | MS.gene034303:intron | 45.0% |
! | GCCATTCCAGAAGTTTTCGT+TGG | - | chr4.3:89337158-89337177 | MS.gene034303:CDS | 45.0% |
!! | AAATCCTTTGGTGGTGGCTT+TGG | + | chr4.3:89336935-89336954 | None:intergenic | 45.0% |
!! | CTGAACAAAGGGCACCTAAA+AGG | + | chr4.3:89333653-89333672 | None:intergenic | 45.0% |
!! | CTTGTTTTTCTCAGGGCCAT+AGG | - | chr4.3:89334717-89334736 | MS.gene034303:CDS | 45.0% |
!! | CTTTTAGGTGCCCTTTGTTC+AGG | - | chr4.3:89333651-89333670 | MS.gene034303:intron | 45.0% |
!! | GGAGCATTACCTGCATCTTT+TGG | - | chr4.3:89334366-89334385 | MS.gene034303:intron | 45.0% |
!! | GGATTTCTAGGGTCATCTTC+AGG | + | chr4.3:89334581-89334600 | None:intergenic | 45.0% |
!! | TTTGCTTTGTGCGGGTTGAT+TGG | - | chr4.3:89336409-89336428 | MS.gene034303:intron | 45.0% |
!!! | GCACTTTTTCTGAACACAGC+TGG | - | chr4.3:89338365-89338384 | MS.gene034303:intron | 45.0% |
AAACAGGAAACCCAACTGGC+GGG | - | chr4.3:89336653-89336672 | MS.gene034303:intron | 50.0% | |
ACAACCAAAGCCACCACCAA+AGG | - | chr4.3:89336928-89336947 | MS.gene034303:intron | 50.0% | |
ACCACTGGAAGTAGAGGACT+AGG | + | chr4.3:89335690-89335709 | None:intergenic | 50.0% | |
ACCAGGTCAGCAATAACAGC+AGG | + | chr4.3:89334602-89334621 | None:intergenic | 50.0% | |
ACTCCTCAACAGGAAGCTTC+TGG | - | chr4.3:89333501-89333520 | MS.gene034303:intron | 50.0% | |
ACTGATGTCCTTGATGCCGT+GGG | - | chr4.3:89336901-89336920 | MS.gene034303:intron | 50.0% | |
AGACCGGCACTTACCATGAT+AGG | - | chr4.3:89332916-89332935 | MS.gene034303:CDS | 50.0% | |
AGCACTAGAGACTCTGACGT+TGG | + | chr4.3:89333715-89333734 | None:intergenic | 50.0% | |
AGCTGTTCTGGCATTTGGTC+TGG | - | chr4.3:89336121-89336140 | MS.gene034303:intron | 50.0% | |
AGGGAAAAGGAGAGGAAGTG+TGG | - | chr4.3:89337098-89337117 | MS.gene034303:intron | 50.0% | |
ATACAGGGCAACCCTTACTC+GGG | - | chr4.3:89338288-89338307 | MS.gene034303:CDS | 50.0% | |
ATGCCAGAAGCTTCCTGTTG+AGG | + | chr4.3:89333507-89333526 | None:intergenic | 50.0% | |
CAACAGGAAGCTTCTGGCAT+GGG | - | chr4.3:89333507-89333526 | MS.gene034303:intron | 50.0% | |
CAATCGCCACACTGATGACA+AGG | + | chr4.3:89336591-89336610 | None:intergenic | 50.0% | |
CACAACTTTAGCCCCGAGTA+AGG | + | chr4.3:89338303-89338322 | None:intergenic | 50.0% | |
CATCAGTGTGGCGATTGTCT+CGG | - | chr4.3:89336594-89336613 | MS.gene034303:intron | 50.0% | |
CCACTGGAAGTAGAGGACTA+GGG | + | chr4.3:89335689-89335708 | None:intergenic | 50.0% | |
CCCTTCCAAGAATGAGAGAG+AGG | - | chr4.3:89335243-89335262 | MS.gene034303:CDS | 50.0% | |
CTACAGATAGCTACTCGAGC+AGG | - | chr4.3:89333846-89333865 | MS.gene034303:intron | 50.0% | |
CTTACTCGGGGCTAAAGTTG+TGG | - | chr4.3:89338301-89338320 | MS.gene034303:CDS | 50.0% | |
GAAACAGGAAACCCAACTGG+CGG | - | chr4.3:89336652-89336671 | MS.gene034303:intron | 50.0% | |
GAAAGAGCTAATGTGCGCAC+AGG | + | chr4.3:89336496-89336515 | None:intergenic | 50.0% | |
GAAGCTTCCTGTTGAGGAGT+TGG | + | chr4.3:89333501-89333520 | None:intergenic | 50.0% | |
GACCCATTCAAAGACACTGC+TGG | - | chr4.3:89338755-89338774 | MS.gene034303:intron | 50.0% | |
GCAACACAGCGAGCATAATC+CGG | + | chr4.3:89337417-89337436 | None:intergenic | 50.0% | |
GGACCAGCAGTGTCTTTGAA+TGG | + | chr4.3:89338761-89338780 | None:intergenic | 50.0% | |
GGCACAGCTGTAGCAACAAT+GGG | - | chr4.3:89336682-89336701 | MS.gene034303:intron | 50.0% | |
GTGATCTCTCGGACACTTTC+AGG | + | chr4.3:89336883-89336902 | None:intergenic | 50.0% | |
TACATAGAGACCGGAGCTCT+TGG | - | chr4.3:89338413-89338432 | MS.gene034303:intron | 50.0% | |
TCAACAGGAAGCTTCTGGCA+TGG | - | chr4.3:89333506-89333525 | MS.gene034303:intron | 50.0% | |
TCAGTGCCTCTTCTCCTAGT+TGG | - | chr4.3:89334443-89334462 | MS.gene034303:CDS | 50.0% | |
TCCTGCTGTTATTGCTGACC+TGG | - | chr4.3:89334598-89334617 | MS.gene034303:intron | 50.0% | |
TCCTTCAGCTCCATCTCGTA+TGG | + | chr4.3:89333394-89333413 | None:intergenic | 50.0% | |
TGGCACAGCTGTAGCAACAA+TGG | - | chr4.3:89336681-89336700 | MS.gene034303:intron | 50.0% | |
TGGCCTATCATGGTAAGTGC+CGG | + | chr4.3:89332922-89332941 | None:intergenic | 50.0% | |
TGGGTGCTCGCTAAAGATGA+GGG | - | chr4.3:89333232-89333251 | MS.gene034303:intron | 50.0% | |
TTCTAAACCTTACACCCCCC+TGG | - | chr4.3:89332962-89332981 | MS.gene034303:CDS | 50.0% | |
TTGAGCAAGCACCTTCAGCA+TGG | - | chr4.3:89336380-89336399 | MS.gene034303:intron | 50.0% | |
TTGTGTTACCCACGGCATCA+AGG | + | chr4.3:89336912-89336931 | None:intergenic | 50.0% | |
! | AGTTTGGGGCTGGAATCTAC+TGG | - | chr4.3:89336556-89336575 | MS.gene034303:intron | 50.0% |
! | CCGATAGCTGATAATGCTGG+AGG | - | chr4.3:89336751-89336770 | MS.gene034303:intron | 50.0% |
! | GGCTTTGGTTGTGTTACCCA+CGG | + | chr4.3:89336920-89336939 | None:intergenic | 50.0% |
!! | ACTAGGAGAAGAGGCACTGA+CGG | + | chr4.3:89334443-89334462 | None:intergenic | 50.0% |
!! | CTTTCTAGCTCTACTGGCCA+TGG | - | chr4.3:89336511-89336530 | MS.gene034303:intron | 50.0% |
!! | GCCCTTTGTTCAGGTTTTGC+TGG | - | chr4.3:89333660-89333679 | MS.gene034303:intron | 50.0% |
!! | GCTGGAATCTACTGGTCTTC+CGG | - | chr4.3:89336564-89336583 | MS.gene034303:intron | 50.0% |
!! | GTCTTCAAGAGAGGCATTGC+AGG | - | chr4.3:89333743-89333762 | MS.gene034303:intron | 50.0% |
!!! | AGTTTTCGTTGGTGGGTTGC+TGG | - | chr4.3:89337169-89337188 | MS.gene034303:CDS | 50.0% |
!!! | GTTTTCGTTGGTGGGTTGCT+GGG | - | chr4.3:89337170-89337189 | MS.gene034303:CDS | 50.0% |
AAACCTTACACCCCCCTGGT+AGG | - | chr4.3:89332966-89332985 | MS.gene034303:CDS | 55.0% | |
AGATGAGGGTCCCCCTGAAA+TGG | - | chr4.3:89333246-89333265 | MS.gene034303:intron | 55.0% | |
AGGAAGCTTCTGGCATGGGA+AGG | - | chr4.3:89333511-89333530 | MS.gene034303:intron | 55.0% | |
AGGCAGTTCATTGAGAGGCC+TGG | - | chr4.3:89337275-89337294 | MS.gene034303:CDS | 55.0% | |
ATAGAGACCGGAGCTCTTGG+AGG | - | chr4.3:89338416-89338435 | MS.gene034303:intron | 55.0% | |
ATTCGGGGTACGCGTGAATC+TGG | - | chr4.3:89336032-89336051 | MS.gene034303:intron | 55.0% | |
CACTGATGTCCTTGATGCCG+TGG | - | chr4.3:89336900-89336919 | MS.gene034303:intron | 55.0% | |
CAGATAGCTACTCGAGCAGG+TGG | - | chr4.3:89333849-89333868 | MS.gene034303:intron | 55.0% | |
CCCTAGTCCTCTACTTCCAG+TGG | - | chr4.3:89335686-89335705 | MS.gene034303:CDS | 55.0% | |
CTGGAAGTAGAGGACTAGGG+AGG | + | chr4.3:89335686-89335705 | None:intergenic | 55.0% | |
CTGTTTGCTCAGTTGGGTGG+TGG | - | chr4.3:89334494-89334513 | MS.gene034303:CDS | 55.0% | |
GAGTCTCTAGTGCTGCGAGA+CGG | - | chr4.3:89333721-89333740 | MS.gene034303:intron | 55.0% | |
GATGTTGGGGCAGACCTTGT+TGG | - | chr4.3:89334536-89334555 | MS.gene034303:CDS | 55.0% | |
GCACTGTTTGCTCAGTTGGG+TGG | - | chr4.3:89334491-89334510 | MS.gene034303:CDS | 55.0% | |
GCCACACTGATGACAAGGAC+CGG | + | chr4.3:89336586-89336605 | None:intergenic | 55.0% | |
GCCATACGAGATGGAGCTGA+AGG | - | chr4.3:89333390-89333409 | MS.gene034303:CDS | 55.0% | |
GGGCACACCTGGTTCAATGA+AGG | - | chr4.3:89333953-89333972 | MS.gene034303:intron | 55.0% | |
GTGGGTGCTCGCTAAAGATG+AGG | - | chr4.3:89333231-89333250 | MS.gene034303:intron | 55.0% | |
TACAGGGCAACCCTTACTCG+GGG | - | chr4.3:89338289-89338308 | MS.gene034303:CDS | 55.0% | |
TCCGGTCCTTGTCATCAGTG+TGG | - | chr4.3:89336582-89336601 | MS.gene034303:intron | 55.0% | |
TGCGAGACGGTCTTCAAGAG+AGG | - | chr4.3:89333734-89333753 | MS.gene034303:intron | 55.0% | |
TTACTCTGCAGTCTACCCGG+TGG | - | chr4.3:89336347-89336366 | MS.gene034303:intron | 55.0% | |
! | ATACCTACCAGGGGGGTGTA+AGG | + | chr4.3:89332972-89332991 | None:intergenic | 55.0% |
! | ATTGTCTCGGCCTACTGGCT+GGG | - | chr4.3:89336607-89336626 | MS.gene034303:intron | 55.0% |
! | GGCCCGATAGCTGATAATGC+TGG | - | chr4.3:89336748-89336767 | MS.gene034303:intron | 55.0% |
! | GTGGGAGATTGTGCTGCTAG+AGG | - | chr4.3:89335750-89335769 | MS.gene034303:CDS | 55.0% |
ACCGGAGCTCTTGGAGGCAA+GGG | - | chr4.3:89338422-89338441 | MS.gene034303:intron | 60.0% | |
AGCAGTCTGTCCCAGCCAGT+AGG | + | chr4.3:89336620-89336639 | None:intergenic | 60.0% | |
CTGTGCAGTTCGGCCAACAG+CGG | + | chr4.3:89337234-89337253 | None:intergenic | 60.0% | |
GATTGTCTCGGCCTACTGGC+TGG | - | chr4.3:89336606-89336625 | MS.gene034303:intron | 60.0% | |
GGCAAGCGCAGCAGAACCAA+TGG | + | chr4.3:89336959-89336978 | None:intergenic | 60.0% | |
GGGTCCCCCTGAAATGGTTC+AGG | - | chr4.3:89333252-89333271 | MS.gene034303:intron | 60.0% | |
TCCCTTGCCTCCAAGAGCTC+CGG | + | chr4.3:89338426-89338445 | None:intergenic | 60.0% | |
TCGCAGCCCAACTCCTCAAC+AGG | - | chr4.3:89333491-89333510 | MS.gene034303:intron | 60.0% | |
TGCCAAACAGCCCGCCAGTT+GGG | + | chr4.3:89336666-89336685 | None:intergenic | 60.0% | |
TGGCGATTGTCTCGGCCTAC+TGG | - | chr4.3:89336602-89336621 | MS.gene034303:intron | 60.0% | |
TGTTGGCCGAACTGCACAGG+AGG | - | chr4.3:89337235-89337254 | MS.gene034303:CDS | 60.0% | |
! | GAACACAGCTGGTGGTGCCT+GGG | - | chr4.3:89338376-89338395 | MS.gene034303:intron | 60.0% |
! | TACTGGCTGGGACAGACTGC+TGG | - | chr4.3:89336619-89336638 | MS.gene034303:intron | 60.0% |
! | TGAACACAGCTGGTGGTGCC+TGG | - | chr4.3:89338375-89338394 | MS.gene034303:intron | 60.0% |
!! | AACCCAACTGGCGGGCTGTT+TGG | - | chr4.3:89336661-89336680 | MS.gene034303:intron | 60.0% |
!! | TGCTGGGGTTAGTTTGGGGC+TGG | - | chr4.3:89336546-89336565 | MS.gene034303:intron | 60.0% |
CGCTGTTGGCCGAACTGCAC+AGG | - | chr4.3:89337232-89337251 | MS.gene034303:CDS | 65.0% | |
GACCGGAGCTCTTGGAGGCA+AGG | - | chr4.3:89338421-89338440 | MS.gene034303:intron | 65.0% | |
GTGCCAAACAGCCCGCCAGT+TGG | + | chr4.3:89336667-89336686 | None:intergenic | 65.0% | |
! | GCTTGGGCTTGTGCCGCTGT+TGG | - | chr4.3:89337218-89337237 | MS.gene034303:CDS | 65.0% |
TGGCTGGGAGTGGGCACACC+TGG | - | chr4.3:89333942-89333961 | MS.gene034303:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 89332894 | 89338847 | 89332894 | ID=MS.gene034303 |
chr4.3 | mRNA | 89332894 | 89338847 | 89332894 | ID=MS.gene034303.t1;Parent=MS.gene034303 |
chr4.3 | exon | 89338758 | 89338847 | 89338758 | ID=MS.gene034303.t1.exon1;Parent=MS.gene034303.t1 |
chr4.3 | CDS | 89338758 | 89338847 | 89338758 | ID=cds.MS.gene034303.t1;Parent=MS.gene034303.t1 |
chr4.3 | exon | 89338468 | 89338671 | 89338468 | ID=MS.gene034303.t1.exon2;Parent=MS.gene034303.t1 |
chr4.3 | CDS | 89338468 | 89338671 | 89338468 | ID=cds.MS.gene034303.t1;Parent=MS.gene034303.t1 |
chr4.3 | exon | 89338209 | 89338360 | 89338209 | ID=MS.gene034303.t1.exon3;Parent=MS.gene034303.t1 |
chr4.3 | CDS | 89338209 | 89338360 | 89338209 | ID=cds.MS.gene034303.t1;Parent=MS.gene034303.t1 |
chr4.3 | exon | 89337977 | 89338124 | 89337977 | ID=MS.gene034303.t1.exon4;Parent=MS.gene034303.t1 |
chr4.3 | CDS | 89337977 | 89338124 | 89337977 | ID=cds.MS.gene034303.t1;Parent=MS.gene034303.t1 |
chr4.3 | exon | 89337757 | 89337889 | 89337757 | ID=MS.gene034303.t1.exon5;Parent=MS.gene034303.t1 |
chr4.3 | CDS | 89337757 | 89337889 | 89337757 | ID=cds.MS.gene034303.t1;Parent=MS.gene034303.t1 |
chr4.3 | exon | 89337122 | 89337294 | 89337122 | ID=MS.gene034303.t1.exon6;Parent=MS.gene034303.t1 |
chr4.3 | CDS | 89337122 | 89337294 | 89337122 | ID=cds.MS.gene034303.t1;Parent=MS.gene034303.t1 |
chr4.3 | exon | 89335883 | 89336003 | 89335883 | ID=MS.gene034303.t1.exon7;Parent=MS.gene034303.t1 |
chr4.3 | CDS | 89335883 | 89336003 | 89335883 | ID=cds.MS.gene034303.t1;Parent=MS.gene034303.t1 |
chr4.3 | exon | 89335599 | 89335786 | 89335599 | ID=MS.gene034303.t1.exon8;Parent=MS.gene034303.t1 |
chr4.3 | CDS | 89335599 | 89335786 | 89335599 | ID=cds.MS.gene034303.t1;Parent=MS.gene034303.t1 |
chr4.3 | exon | 89334946 | 89335383 | 89334946 | ID=MS.gene034303.t1.exon9;Parent=MS.gene034303.t1 |
chr4.3 | CDS | 89334946 | 89335383 | 89334946 | ID=cds.MS.gene034303.t1;Parent=MS.gene034303.t1 |
chr4.3 | exon | 89334697 | 89334861 | 89334697 | ID=MS.gene034303.t1.exon10;Parent=MS.gene034303.t1 |
chr4.3 | CDS | 89334697 | 89334861 | 89334697 | ID=cds.MS.gene034303.t1;Parent=MS.gene034303.t1 |
chr4.3 | exon | 89334437 | 89334592 | 89334437 | ID=MS.gene034303.t1.exon11;Parent=MS.gene034303.t1 |
chr4.3 | CDS | 89334437 | 89334592 | 89334437 | ID=cds.MS.gene034303.t1;Parent=MS.gene034303.t1 |
chr4.3 | exon | 89334231 | 89334342 | 89334231 | ID=MS.gene034303.t1.exon12;Parent=MS.gene034303.t1 |
chr4.3 | CDS | 89334231 | 89334342 | 89334231 | ID=cds.MS.gene034303.t1;Parent=MS.gene034303.t1 |
chr4.3 | exon | 89333261 | 89333480 | 89333261 | ID=MS.gene034303.t1.exon13;Parent=MS.gene034303.t1 |
chr4.3 | CDS | 89333261 | 89333480 | 89333261 | ID=cds.MS.gene034303.t1;Parent=MS.gene034303.t1 |
chr4.3 | exon | 89332894 | 89332993 | 89332894 | ID=MS.gene034303.t1.exon14;Parent=MS.gene034303.t1 |
chr4.3 | CDS | 89332894 | 89332993 | 89332894 | ID=cds.MS.gene034303.t1;Parent=MS.gene034303.t1 |
Gene Sequence |
Protein sequence |