Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene053118.t1 | XP_013454481.1 | 99.4 | 799 | 5 | 0 | 1 | 799 | 1 | 799 | 0.00E+00 | 1501.5 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene053118.t1 | Q56ZN6 | 86.9 | 801 | 103 | 1 | 1 | 799 | 2 | 802 | 0.0e+00 | 1350.1 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene053118.t1 | A0A072UFQ2 | 99.4 | 799 | 5 | 0 | 1 | 799 | 1 | 799 | 0.0e+00 | 1501.5 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049180 | MS.gene053118 | 0.809479 | 1.85E-50 | -1.69E-46 |
MS.gene052985 | MS.gene053118 | 0.999031 | 7.38E-287 | -1.69E-46 |
MS.gene053118 | MS.gene054585 | 0.809079 | 2.26E-50 | -1.69E-46 |
MS.gene053118 | MS.gene06117 | 0.829002 | 6.57E-55 | -1.69E-46 |
MS.gene053118 | MS.gene20202 | 0.81956 | 1.09E-52 | -1.69E-46 |
MS.gene053118 | MS.gene38302 | 0.800799 | 1.22E-48 | -1.69E-46 |
MS.gene053118 | MS.gene41628 | 0.805658 | 1.20E-49 | -1.69E-46 |
MS.gene053118 | MS.gene55836 | 0.824612 | 7.35E-54 | -1.69E-46 |
MS.gene053118 | MS.gene67231 | 0.819652 | 1.04E-52 | -1.69E-46 |
MS.gene053118 | MS.gene78187 | 0.801168 | 1.02E-48 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene053118 | MS.gene052985 | PPI |
MS.gene053118 | MS.gene060330 | PPI |
MS.gene053118 | MS.gene060331 | PPI |
MS.gene053118 | MS.gene98130 | PPI |
MS.gene036690 | MS.gene053118 | PPI |
MS.gene053118 | MS.gene034303 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene053118.t1 | MTR_4g005280 | 99.374 | 799 | 5 | 0 | 1 | 799 | 1 | 799 | 0.0 | 1590 |
MS.gene053118.t1 | MTR_4g115970 | 39.369 | 729 | 371 | 14 | 95 | 798 | 73 | 755 | 6.49e-148 | 452 |
MS.gene053118.t1 | MTR_4g115970 | 40.072 | 559 | 290 | 9 | 152 | 699 | 47 | 571 | 1.94e-112 | 355 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene053118.t1 | AT1G16780 | 86.517 | 801 | 106 | 1 | 1 | 799 | 2 | 802 | 0.0 | 1426 |
MS.gene053118.t1 | AT1G16780 | 86.517 | 801 | 106 | 1 | 1 | 799 | 2 | 802 | 0.0 | 1426 |
MS.gene053118.t1 | AT1G16780 | 86.517 | 801 | 106 | 1 | 1 | 799 | 2 | 802 | 0.0 | 1426 |
MS.gene053118.t1 | AT1G78920 | 86.891 | 801 | 103 | 1 | 1 | 799 | 2 | 802 | 0.0 | 1415 |
MS.gene053118.t1 | AT1G78920 | 86.891 | 801 | 103 | 1 | 1 | 799 | 2 | 802 | 0.0 | 1415 |
MS.gene053118.t1 | AT1G78920 | 86.891 | 801 | 103 | 1 | 1 | 799 | 2 | 802 | 0.0 | 1415 |
MS.gene053118.t1 | AT1G15690 | 38.874 | 728 | 376 | 14 | 95 | 798 | 77 | 759 | 1.49e-147 | 452 |
MS.gene053118.t1 | AT1G15690 | 36.634 | 606 | 327 | 14 | 84 | 665 | 60 | 632 | 1.89e-101 | 327 |
Find 218 sgRNAs with CRISPR-Local
Find 442 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GTGATCTCTCGGACACTTTC+AGG | 0.202699 | 4.3:+89463299 | None:intergenic |
CATAATTGCTGGGGTTAGTT+TGG | 0.214531 | 4.3:-89463639 | MS.gene053118:CDS |
GTATTAACCTGAACCATTTC+AGG | 0.219472 | 4.3:+89466894 | None:intergenic |
CTCCTAGTTGGATATGGATT+TGG | 0.258450 | 4.3:-89465725 | MS.gene053118:CDS |
CCTCTTCTCCTAGTTGGATA+TGG | 0.267869 | 4.3:-89465731 | MS.gene053118:CDS |
GTTCTGCACACCTGTTTAAA+AGG | 0.268492 | 4.3:+89463146 | None:intergenic |
ATAATTGCTGGGGTTAGTTT+GGG | 0.271626 | 4.3:-89463638 | MS.gene053118:CDS |
GTGATGACAAAGACAATAAT+TGG | 0.296694 | 4.3:+89466987 | None:intergenic |
TGAACACAGCTGGTGGTGCC+TGG | 0.305767 | 4.3:-89461805 | MS.gene053118:CDS |
CTGAACAAAGGGCACCTAAA+AGG | 0.319212 | 4.3:+89466530 | None:intergenic |
AACAGTGTCTGGTATTCTTA+TGG | 0.322376 | 4.3:-89461837 | MS.gene053118:CDS |
GATTGTCTCGGCCTACTGGC+TGG | 0.322613 | 4.3:-89463573 | MS.gene053118:CDS |
CCTTCTGTTTAGTGCTTACA+TGG | 0.322712 | 4.3:-89463195 | MS.gene053118:CDS |
GCAATAACAGCAGGATTTCT+AGG | 0.324300 | 4.3:+89465590 | None:intergenic |
TATATTTGTCTTTAGTGCTT+GGG | 0.330337 | 4.3:-89462978 | MS.gene053118:CDS |
TGTTGCACTGTTTGCTCAGT+TGG | 0.331138 | 4.3:-89465693 | MS.gene053118:CDS |
TAAGGTTTAGAACGCATGTT+AGG | 0.339289 | 4.3:+89467202 | None:intergenic |
AACCCAACTGGCGGGCTGTT+TGG | 0.345596 | 4.3:-89463518 | MS.gene053118:CDS |
TTATATTTGTCTTTAGTGCT+TGG | 0.350720 | 4.3:-89462979 | MS.gene053118:CDS |
AAATCCTTTGGTGGTGGCTT+TGG | 0.352874 | 4.3:+89463247 | None:intergenic |
CATTGAGAGGCCTGGTATAA+TGG | 0.354472 | 4.3:-89462897 | MS.gene053118:intron |
TGGCTGGGAGTGGGCACACC+TGG | 0.358855 | 4.3:-89466238 | MS.gene053118:CDS |
CACCCACTTCATAAGATATA+TGG | 0.360172 | 4.3:+89466938 | None:intergenic |
CGCATGTTAGGGAAAGTTCT+TGG | 0.364305 | 4.3:+89467214 | None:intergenic |
AGCTGTTCTGGCATTTGGTC+TGG | 0.366296 | 4.3:-89464058 | MS.gene053118:intron |
AAGCTTCCTGTTGAGGAGTT+GGG | 0.368604 | 4.3:+89466683 | None:intergenic |
ATTCTTACCATGGATATGTT+TGG | 0.370822 | 4.3:-89463452 | MS.gene053118:CDS |
TTGCTGGATATGTAGGGATG+TGG | 0.380264 | 4.3:-89466504 | MS.gene053118:CDS |
TACATAGAGACCGGAGCTCT+TGG | 0.380742 | 4.3:-89461767 | MS.gene053118:CDS |
TTATCAGCTCTTATCGTTGT+TGG | 0.383096 | 4.3:-89466307 | MS.gene053118:CDS |
GTCTTCAAGAGAGGCATTGC+AGG | 0.388478 | 4.3:-89466437 | MS.gene053118:intron |
ATACTAAAGCAGCTGATGTT+GGG | 0.393066 | 4.3:-89465658 | MS.gene053118:CDS |
CATGGCACTAACATAATTGC+TGG | 0.393948 | 4.3:-89463650 | MS.gene053118:CDS |
ACTCCTCAACAGGAAGCTTC+TGG | 0.394465 | 4.3:-89466679 | MS.gene053118:CDS |
GCTGGAATCTACTGGTCTTC+CGG | 0.395596 | 4.3:-89463615 | MS.gene053118:CDS |
AAACATAAAATGTGGCATAA+AGG | 0.395610 | 4.3:+89466260 | None:intergenic |
ATCATTTCACCTATTGTAGT+TGG | 0.395808 | 4.3:-89462691 | MS.gene053118:intron |
TGCCAAACAGCCCGCCAGTT+GGG | 0.396544 | 4.3:+89463516 | None:intergenic |
GAAGCTTCCTGTTGAGGAGT+TGG | 0.397166 | 4.3:+89466682 | None:intergenic |
GTAAACTCACCAACTACAAT+AGG | 0.397201 | 4.3:+89462682 | None:intergenic |
CTGATGTTTGCAACAGTGTC+TGG | 0.399266 | 4.3:-89461848 | MS.gene053118:CDS |
ATTCGGGGTACACGTGAATC+TGG | 0.399558 | 4.3:-89464147 | MS.gene053118:CDS |
GGATTTCTAGGGTCATCTTC+AGG | 0.399595 | 4.3:+89465602 | None:intergenic |
CCTTGTTGGAAAAGTAGAAC+AGG | 0.400333 | 4.3:-89465630 | MS.gene053118:CDS |
TGTTGTTCACTCATTTGATC+TGG | 0.402259 | 4.3:-89464196 | MS.gene053118:CDS |
TACTGGCTGGGACAGACTGC+TGG | 0.404895 | 4.3:-89463560 | MS.gene053118:CDS |
TGCTGGGGTTAGTTTGGGGC+TGG | 0.408336 | 4.3:-89463633 | MS.gene053118:CDS |
TCTTCTGATTCAGATCCATC+TGG | 0.409549 | 4.3:-89464237 | MS.gene053118:intron |
GGATTTATCCGGACACAGTA+TGG | 0.409934 | 4.3:-89466769 | MS.gene053118:CDS |
GATGATAAAACCTGGTGCTT+TGG | 0.411442 | 4.3:-89462716 | MS.gene053118:CDS |
CACAACTTTAGCCCCGAGTA+AGG | 0.416921 | 4.3:+89461880 | None:intergenic |
AGCAAGCAACATAGCCATCT+TGG | 0.418136 | 4.3:+89466738 | None:intergenic |
GCTCACAAAGCAGCAATAAC+AGG | 0.418888 | 4.3:-89461728 | MS.gene053118:CDS |
ATAATCAGTGCCATGATACT+AGG | 0.421966 | 4.3:-89464375 | MS.gene053118:CDS |
TGGCGATTGTCTCGGCCTAC+TGG | 0.422518 | 4.3:-89463577 | MS.gene053118:CDS |
CTGTATAGTAGCCCAAAATT+CGG | 0.423075 | 4.3:+89461909 | None:intergenic |
GTTGCACTGTTTGCTCAGTT+GGG | 0.423871 | 4.3:-89465692 | MS.gene053118:CDS |
TTTGCTTTGTGCGGGTTGAT+TGG | 0.430392 | 4.3:-89463770 | MS.gene053118:CDS |
AGCTCTTATCGTTGTTGGTA+TGG | 0.431805 | 4.3:-89466302 | MS.gene053118:CDS |
TCGCAGCCCAACTCCTCAAC+AGG | 0.433376 | 4.3:-89466689 | MS.gene053118:CDS |
CGCTGTTGGCCGAACTGCAC+AGG | 0.434929 | 4.3:-89462948 | MS.gene053118:CDS |
GGAAAGTTCTTGGCCTATCA+TGG | 0.449445 | 4.3:+89467224 | None:intergenic |
GTTTAGTGCTTACATGGATG+AGG | 0.456398 | 4.3:-89463189 | MS.gene053118:CDS |
AGTTTGGGGCTGGAATCTAC+TGG | 0.456442 | 4.3:-89463623 | MS.gene053118:CDS |
AGAACCAATGGCAAATCCTT+TGG | 0.457270 | 4.3:+89463235 | None:intergenic |
TATACAGGGCAACCCTTACT+CGG | 0.457737 | 4.3:-89461893 | MS.gene053118:CDS |
TTAGCTCTTTCTAGCTCTAC+TGG | 0.461182 | 4.3:-89463674 | MS.gene053118:CDS |
TCAGTGCCTCTTCTCCTAGT+TGG | 0.461997 | 4.3:-89465737 | MS.gene053118:intron |
TGCTGGATATGTAGGGATGT+GGG | 0.463967 | 4.3:-89466503 | MS.gene053118:CDS |
CATGATGGATGAAGATATCA+TGG | 0.464184 | 4.3:-89467260 | MS.gene053118:CDS |
GTTGTTGGTATGGCTGTAAT+CGG | 0.468693 | 4.3:-89466292 | MS.gene053118:CDS |
GGACCAGCAGTGTCTTTGAA+TGG | 0.468953 | 4.3:+89461422 | None:intergenic |
CTGTTTGCTCAGTTGGGTGG+TGG | 0.469062 | 4.3:-89465686 | MS.gene053118:CDS |
GCTGGACTAATAGATGAAAC+AGG | 0.469924 | 4.3:-89463542 | MS.gene053118:CDS |
GACTCCTATGGAAGATCCTA+TGG | 0.470305 | 4.3:-89464118 | MS.gene053118:CDS |
ACAGGATTACAAGGAGAAAC+CGG | 0.475584 | 4.3:-89462785 | MS.gene053118:intron |
GCAACACAGCGAGCATAATC+CGG | 0.476998 | 4.3:+89462766 | None:intergenic |
ATTGTCTCGGCCTACTGGCT+GGG | 0.479535 | 4.3:-89463572 | MS.gene053118:CDS |
AGACCGGCACTTACCATGAT+AGG | 0.481059 | 4.3:-89467237 | MS.gene053118:CDS |
TCCAGCAAAACCTGAACAAA+GGG | 0.483605 | 4.3:+89466519 | None:intergenic |
CAACAACTCTCACAGGAAGA+TGG | 0.484051 | 4.3:+89461346 | None:intergenic |
TATACTAAAGCAGCTGATGT+TGG | 0.487327 | 4.3:-89465659 | MS.gene053118:CDS |
CTTGTAGTCAGTATAATACT+TGG | 0.490704 | 4.3:+89463715 | None:intergenic |
CAACAGGAAGCTTCTGGCAT+GGG | 0.492214 | 4.3:-89466673 | MS.gene053118:CDS |
GATGTTGGGGCAGACCTTGT+TGG | 0.498069 | 4.3:-89465644 | MS.gene053118:CDS |
GACCAGCAGTGTCTTTGAAT+GGG | 0.498471 | 4.3:+89461423 | None:intergenic |
TCCCTTGCCTCCAAGAGCTC+CGG | 0.500650 | 4.3:+89461757 | None:intergenic |
GCTTGGGCTTGTGCCGCTGT+TGG | 0.500731 | 4.3:-89462962 | MS.gene053118:CDS |
CTCCAGCATTATCAGCTATC+GGG | 0.502143 | 4.3:+89463429 | None:intergenic |
ATATAGTTCCATACTGTGTC+CGG | 0.503106 | 4.3:+89466761 | None:intergenic |
ATACTTTCTACAGGATTACA+AGG | 0.503676 | 4.3:-89462794 | MS.gene053118:intron |
GGCACAGCTGTAGCAACAAT+GGG | 0.504612 | 4.3:-89463497 | MS.gene053118:CDS |
AACCCACCAACGAAAACTTC+TGG | 0.504930 | 4.3:+89463016 | None:intergenic |
CCTCCAGCATTATCAGCTAT+CGG | 0.506247 | 4.3:+89463428 | None:intergenic |
ACCGGAGCTCTTGGAGGCAA+GGG | 0.509777 | 4.3:-89461758 | MS.gene053118:CDS |
TATTAACCTGAACCATTTCA+GGG | 0.511261 | 4.3:+89466895 | None:intergenic |
CATCAGTGTGGCGATTGTCT+CGG | 0.513177 | 4.3:-89463585 | MS.gene053118:CDS |
ATAGAGACCGGAGCTCTTGG+AGG | 0.517810 | 4.3:-89461764 | MS.gene053118:CDS |
CTCAACGATTACATTGGTAA+TGG | 0.518087 | 4.3:-89461372 | MS.gene053118:CDS |
ACCACCAAAGGATTTGCCAT+TGG | 0.518351 | 4.3:-89463239 | MS.gene053118:CDS |
GATGAAACAGGAAACCCAAC+TGG | 0.519102 | 4.3:-89463530 | MS.gene053118:CDS |
CTTTCTAGCTCTACTGGCCA+TGG | 0.520652 | 4.3:-89463668 | MS.gene053118:CDS |
TAACAACCTCCTGTGCAGTT+CGG | 0.520733 | 4.3:+89462939 | None:intergenic |
ATGGAGCTGAAGGATTTATC+CGG | 0.521496 | 4.3:-89466780 | MS.gene053118:CDS |
GTACTTCTTTGCATTATCCC+AGG | 0.521610 | 4.3:+89461787 | None:intergenic |
GAAATGATTGCCAAAGCACC+AGG | 0.522732 | 4.3:+89462706 | None:intergenic |
GTGCCAAACAGCCCGCCAGT+TGG | 0.522998 | 4.3:+89463515 | None:intergenic |
GGCTTTGGTTGTGTTACCCA+CGG | 0.523635 | 4.3:+89463262 | None:intergenic |
AACAACTCTCACAGGAAGAT+GGG | 0.526459 | 4.3:+89461347 | None:intergenic |
TAATCAGTGCCATGATACTA+GGG | 0.526459 | 4.3:-89464374 | MS.gene053118:CDS |
ATACAGGGCAACCCTTACTC+GGG | 0.533052 | 4.3:-89461892 | MS.gene053118:CDS |
TCCTGCTGTTATTGCTGACC+TGG | 0.533883 | 4.3:-89465582 | MS.gene053118:intron |
CTTAAACTTACCATTATACC+AGG | 0.534249 | 4.3:+89462887 | None:intergenic |
CAGATATTTCGTATTCTACT+CGG | 0.534654 | 4.3:-89467086 | MS.gene053118:CDS |
GGCAAGCGCAGCAGAACCAA+TGG | 0.535580 | 4.3:+89463223 | None:intergenic |
GAACACAGCTGGTGGTGCCT+GGG | 0.539192 | 4.3:-89461804 | MS.gene053118:CDS |
GACCGGAGCTCTTGGAGGCA+AGG | 0.539834 | 4.3:-89461759 | MS.gene053118:CDS |
ATGCCAGAAGCTTCCTGTTG+AGG | 0.540435 | 4.3:+89466676 | None:intergenic |
AATTGTAGAAATGAGTCAGC+AGG | 0.542639 | 4.3:-89463405 | MS.gene053118:intron |
ATGGCACTAACATAATTGCT+GGG | 0.543319 | 4.3:-89463649 | MS.gene053118:CDS |
TGGCACAGCTGTAGCAACAA+TGG | 0.545541 | 4.3:-89463498 | MS.gene053118:CDS |
TCCTTCAGCTCCATCTCGTA+TGG | 0.546487 | 4.3:+89466789 | None:intergenic |
CGCTGCTTATATTCTTACCA+TGG | 0.547501 | 4.3:-89463462 | MS.gene053118:CDS |
AAGGAAGCTGAGAATACAAA+TGG | 0.547852 | 4.3:+89466965 | None:intergenic |
CTGAGCAAACAGTGCAACAA+AGG | 0.548581 | 4.3:+89465697 | None:intergenic |
AGGCAGTTCATTGAGAGGCC+TGG | 0.551166 | 4.3:-89462905 | MS.gene053118:CDS |
CAATAACAGCAGGATTTCTA+GGG | 0.553964 | 4.3:+89465591 | None:intergenic |
ATCTGGACTAATGACTCCTA+TGG | 0.555931 | 4.3:-89464130 | MS.gene053118:CDS |
AATGGCAAATCCTTTGGTGG+TGG | 0.556027 | 4.3:+89463241 | None:intergenic |
GCAAAGAAGTACATAGAGAC+CGG | 0.557523 | 4.3:-89461776 | MS.gene053118:CDS |
TGGCCTATCATGGTAAGTGC+CGG | 0.559300 | 4.3:+89467234 | None:intergenic |
CACTGATGTCCTTGATGCCG+TGG | 0.559728 | 4.3:-89463279 | MS.gene053118:CDS |
GCCACACTGATGACAAGGAC+CGG | 0.560747 | 4.3:+89463596 | None:intergenic |
ACCAATGGCAAATCCTTTGG+TGG | 0.560777 | 4.3:+89463238 | None:intergenic |
ACCAGGTCAGCAATAACAGC+AGG | 0.562238 | 4.3:+89465581 | None:intergenic |
AGCACTAAACAGAAGGAAAG+AGG | 0.562509 | 4.3:+89463202 | None:intergenic |
TCGCCATATATCTTATGAAG+TGG | 0.562743 | 4.3:-89466941 | MS.gene053118:CDS |
CTACAGATAGCTACTCGAGC+AGG | 0.562784 | 4.3:-89466334 | MS.gene053118:intron |
GCCATACGAGATGGAGCTGA+AGG | 0.564432 | 4.3:-89466790 | MS.gene053118:CDS |
CGCCATATATCTTATGAAGT+GGG | 0.565069 | 4.3:-89466940 | MS.gene053118:CDS |
TCAAATGAGTGAACAACAAG+AGG | 0.566209 | 4.3:+89464201 | None:intergenic |
TCAACAGGAAGCTTCTGGCA+TGG | 0.567106 | 4.3:-89466674 | MS.gene053118:CDS |
AAACAGGAAACCCAACTGGC+GGG | 0.567211 | 4.3:-89463526 | MS.gene053118:CDS |
TTGTGTTACCCACGGCATCA+AGG | 0.567332 | 4.3:+89463270 | None:intergenic |
GATCTGGTAGTTTCATCTGT+GGG | 0.570293 | 4.3:-89464180 | MS.gene053118:CDS |
AAGGTTTAGAACGCATGTTA+GGG | 0.570693 | 4.3:+89467203 | None:intergenic |
CAAGGACATCAGTGATCTCT+CGG | 0.571210 | 4.3:+89463288 | None:intergenic |
GATGAAGATATCATGGAGAC+CGG | 0.572678 | 4.3:-89467253 | MS.gene053118:CDS |
GGCCCGATAGCTGATAATGC+TGG | 0.573393 | 4.3:-89463431 | MS.gene053118:CDS |
ACCAACGAAAACTTCTGGAA+TGG | 0.573408 | 4.3:+89463021 | None:intergenic |
GGGCACACCTGGTTCAATGA+AGG | 0.573827 | 4.3:-89466227 | MS.gene053118:CDS |
CCTTTCTGAAGAATTGCCAT+AGG | 0.576305 | 4.3:+89464102 | None:intergenic |
CACCAAATCCATATCCAACT+AGG | 0.578407 | 4.3:+89465723 | None:intergenic |
TAATTACTCTGCAGTCTACC+CGG | 0.578663 | 4.3:-89463835 | MS.gene053118:intron |
TAATTGCTGGGGTTAGTTTG+GGG | 0.579268 | 4.3:-89463637 | MS.gene053118:CDS |
TACTAAAGCAGCTGATGTTG+GGG | 0.579700 | 4.3:-89465657 | MS.gene053118:CDS |
ATAGCTGATGCCATACGAGA+TGG | 0.580045 | 4.3:-89466799 | MS.gene053118:CDS |
CCTATGGCAATTCTTCAGAA+AGG | 0.580609 | 4.3:-89464102 | MS.gene053118:CDS |
TGATCTGGTAGTTTCATCTG+TGG | 0.580925 | 4.3:-89464181 | MS.gene053118:CDS |
GGAAACAAGATGAAGCCAGA+TGG | 0.582999 | 4.3:+89464222 | None:intergenic |
CCATATCCAACTAGGAGAAG+AGG | 0.583079 | 4.3:+89465731 | None:intergenic |
CCATGTAAGCACTAAACAGA+AGG | 0.583611 | 4.3:+89463195 | None:intergenic |
CTTACTCGGGGCTAAAGTTG+TGG | 0.584208 | 4.3:-89461879 | MS.gene053118:CDS |
TGTTGGCCGAACTGCACAGG+AGG | 0.585269 | 4.3:-89462945 | MS.gene053118:CDS |
TTTATAAGTACATGAAGTGA+AGG | 0.589437 | 4.3:+89461401 | None:intergenic |
AGCACTAGAGACTCTGACGT+TGG | 0.590025 | 4.3:+89466468 | None:intergenic |
ATTAACCTGAACCATTTCAG+GGG | 0.591314 | 4.3:+89466896 | None:intergenic |
GCTCAACATAAAGTAACCAC+CGG | 0.591571 | 4.3:+89463816 | None:intergenic |
CAATCGCCACACTGATGACA+AGG | 0.592155 | 4.3:+89463591 | None:intergenic |
GTGGGTGCTCGCTAAAGATG+AGG | 0.592519 | 4.3:-89466922 | MS.gene053118:CDS |
AGGTTGTTAATGAAGTAAGA+AGG | 0.592583 | 4.3:-89462925 | MS.gene053118:CDS |
GACCCATTCAAAGACACTGC+TGG | 0.592957 | 4.3:-89461425 | MS.gene053118:CDS |
ATCCAGCAAAACCTGAACAA+AGG | 0.593209 | 4.3:+89466518 | None:intergenic |
ACAACTTTAGCCCCGAGTAA+GGG | 0.593448 | 4.3:+89461881 | None:intergenic |
CAGCAATTATGTTAGTGCCA+TGG | 0.596187 | 4.3:+89463651 | None:intergenic |
GCACTGTTTGCTCAGTTGGG+TGG | 0.600069 | 4.3:-89465689 | MS.gene053118:CDS |
TTCTAAGGTTGGAGACAATG+TGG | 0.602278 | 4.3:-89464448 | MS.gene053118:intron |
GAAAGAGCTAATGTGCGCAC+AGG | 0.602469 | 4.3:+89463686 | None:intergenic |
GCAAAATTGAACCATGCTGA+AGG | 0.604191 | 4.3:+89463788 | None:intergenic |
CTGTGCAGTTCGGCCAACAG+CGG | 0.608968 | 4.3:+89462949 | None:intergenic |
AGGAAGCTTCTGGCATGGGA+AGG | 0.613106 | 4.3:-89466669 | MS.gene053118:intron |
ACTAAAGACAAATATAAGCA+TGG | 0.615466 | 4.3:+89462985 | None:intergenic |
GTATGGAACTATATCCAAGA+TGG | 0.620046 | 4.3:-89466752 | MS.gene053118:CDS |
TTGAGCAAGCACCTTCAGCA+TGG | 0.620246 | 4.3:-89463799 | MS.gene053118:CDS |
TAAGAAGGCAGTTCATTGAG+AGG | 0.623441 | 4.3:-89462910 | MS.gene053118:CDS |
GCACAACGCTGTAAAATCGA+AGG | 0.623843 | 4.3:-89464342 | MS.gene053118:intron |
GAGTCTCTAGTGCTGCGAGA+CGG | 0.624351 | 4.3:-89466459 | MS.gene053118:CDS |
GATGCTCTCAACGATTACAT+TGG | 0.626481 | 4.3:-89461378 | MS.gene053118:CDS |
TCTAAGGTTGGAGACAATGT+GGG | 0.628132 | 4.3:-89464447 | MS.gene053118:intron |
AGCAGTCTGTCCCAGCCAGT+AGG | 0.628575 | 4.3:+89463562 | None:intergenic |
TATCGGGCCAAACATATCCA+TGG | 0.628672 | 4.3:+89463445 | None:intergenic |
TCAGTGACCTTCATTGAACC+AGG | 0.631148 | 4.3:+89466220 | None:intergenic |
CTTGTTGGAAAAGTAGAACA+GGG | 0.631174 | 4.3:-89465629 | MS.gene053118:CDS |
AAAAGATAGCTCCAAAGCCG+AGG | 0.633559 | 4.3:+89467030 | None:intergenic |
CGAGGAGTAAAAGAATGAAG+AGG | 0.633805 | 4.3:+89467048 | None:intergenic |
ACAACCAAAGCCACCACCAA+AGG | 0.636877 | 4.3:-89463251 | MS.gene053118:CDS |
TGGGTGCTCGCTAAAGATGA+GGG | 0.637313 | 4.3:-89466921 | MS.gene053118:CDS |
AGCAAACAGTGCAACAAAGG+AGG | 0.638258 | 4.3:+89465700 | None:intergenic |
TCCCAGCCAAACATAAAATG+TGG | 0.638868 | 4.3:+89466252 | None:intergenic |
TGCGAGACGGTCTTCAAGAG+AGG | 0.642215 | 4.3:-89466446 | MS.gene053118:CDS |
ACTGATGTCCTTGATGCCGT+GGG | 0.654794 | 4.3:-89463278 | MS.gene053118:CDS |
CTCAACATAAAGTAACCACC+GGG | 0.655219 | 4.3:+89463817 | None:intergenic |
TTAAGAGAGATGATAAAACC+TGG | 0.656352 | 4.3:-89462724 | MS.gene053118:CDS |
ATTGCCATAGGATCTTCCAT+AGG | 0.659545 | 4.3:+89464114 | None:intergenic |
GAAACAGGAAACCCAACTGG+CGG | 0.663662 | 4.3:-89463527 | MS.gene053118:CDS |
AATCAGTGCCATGATACTAG+GGG | 0.667370 | 4.3:-89464373 | MS.gene053118:CDS |
CAGATAGCTACTCGAGCAGG+TGG | 0.668716 | 4.3:-89466331 | MS.gene053118:CDS |
GTGGGAGATTGTGCTGCTAG+AGG | 0.672732 | 4.3:-89464429 | MS.gene053118:CDS |
TCATAAGATATATGGCGACA+AGG | 0.681860 | 4.3:+89466946 | None:intergenic |
CCGATAGCTGATAATGCTGG+AGG | 0.682452 | 4.3:-89463428 | MS.gene053118:CDS |
TACAGGGCAACCCTTACTCG+GGG | 0.682668 | 4.3:-89461891 | MS.gene053118:CDS |
TGGCACTAACATAATTGCTG+GGG | 0.685344 | 4.3:-89463648 | MS.gene053118:CDS |
TCCGGTCCTTGTCATCAGTG+TGG | 0.685748 | 4.3:-89463597 | MS.gene053118:CDS |
TTAACCTGAACCATTTCAGG+GGG | 0.686083 | 4.3:+89466897 | None:intergenic |
CATGGTAAGAATATAAGCAG+CGG | 0.698682 | 4.3:+89463463 | None:intergenic |
ATCAGTGCCATGATACTAGG+GGG | 0.707686 | 4.3:-89464372 | MS.gene053118:CDS |
TTACTCTGCAGTCTACCCGG+TGG | 0.731661 | 4.3:-89463832 | MS.gene053118:intron |
GATGATAATACCTACCAGGG+GGG | 0.785251 | 4.3:+89467177 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AACTTATTTATTATAATGAA+TGG | - | chr4.3:89462440-89462459 | MS.gene053118:intron | 10.0% |
!! | TCATTTATGATATTTAAATT+TGG | - | chr4.3:89464592-89464611 | MS.gene053118:intron | 10.0% |
!! | TTCATTATAATAAATAAGTT+CGG | + | chr4.3:89462440-89462459 | None:intergenic | 10.0% |
!!! | GAATTTTTAAAATCAAAATA+AGG | - | chr4.3:89463184-89463203 | MS.gene053118:CDS | 10.0% |
!! | AAATAATTGATATACATACA+CGG | - | chr4.3:89463974-89463993 | MS.gene053118:intron | 15.0% |
!! | ATTAAAATTTAATGCAATTG+AGG | - | chr4.3:89465512-89465531 | MS.gene053118:intron | 15.0% |
!! | CTCATAAAATTATAAACATA+AGG | - | chr4.3:89464020-89464039 | MS.gene053118:intron | 15.0% |
!! | TAATAAGAAATTTAACAGTA+TGG | - | chr4.3:89463818-89463837 | MS.gene053118:CDS | 15.0% |
!! | TACTGTTAAATTTCTTATTA+TGG | + | chr4.3:89463818-89463837 | None:intergenic | 15.0% |
!! | TCATTATAATAAATAAGTTC+GGG | + | chr4.3:89462439-89462458 | None:intergenic | 15.0% |
!! | TTAAAATTTAATGCAATTGA+GGG | - | chr4.3:89465513-89465532 | MS.gene053118:intron | 15.0% |
!!! | ATCTGTTAATAGTATATTTT+TGG | - | chr4.3:89466616-89466635 | MS.gene053118:intron | 15.0% |
!!! | ATTTTGAATCTTGAAATTAT+TGG | - | chr4.3:89461744-89461763 | MS.gene053118:CDS | 15.0% |
!!! | TTAATAGTATATTTTTGGTA+TGG | - | chr4.3:89466621-89466640 | MS.gene053118:intron | 15.0% |
!!! | TTATTTTTATTTTACAGAGT+GGG | - | chr4.3:89467165-89467184 | MS.gene053118:intron | 15.0% |
!!! | TTTATTTTTATTTTACAGAG+TGG | - | chr4.3:89467164-89467183 | MS.gene053118:intron | 15.0% |
!!! | TTTTCTGTTTATAATTTATG+TGG | - | chr4.3:89464059-89464078 | MS.gene053118:CDS | 15.0% |
!! | AAATCTCAAATATAACAGTA+TGG | + | chr4.3:89465260-89465279 | None:intergenic | 20.0% |
!! | AACTTTCTTTCAGTTAATAT+AGG | + | chr4.3:89462260-89462279 | None:intergenic | 20.0% |
!! | AGGTATATTATAATAAACAC+TGG | + | chr4.3:89467088-89467107 | None:intergenic | 20.0% |
!! | ATATTACTCTAAATTGTCAT+AGG | + | chr4.3:89466968-89466987 | None:intergenic | 20.0% |
!! | ATCTAGAAAGTAATATGATA+AGG | + | chr4.3:89461797-89461816 | None:intergenic | 20.0% |
!! | CATAATATCTTCAATATTCT+TGG | + | chr4.3:89463934-89463953 | None:intergenic | 20.0% |
!! | CATTATAATAAATAAGTTCG+GGG | + | chr4.3:89462438-89462457 | None:intergenic | 20.0% |
!! | TAAAATTATAAACATAAGGC+AGG | - | chr4.3:89464024-89464043 | MS.gene053118:intron | 20.0% |
!! | TTATTTGGATAGTTATTGAA+TGG | + | chr4.3:89463720-89463739 | None:intergenic | 20.0% |
!!! | ATATTGTGTTAAATTTCTAG+AGG | - | chr4.3:89466109-89466128 | MS.gene053118:intron | 20.0% |
!!! | ATTTTAATAGCCTAATAAGA+TGG | + | chr4.3:89465500-89465519 | None:intergenic | 20.0% |
!!! | TCAACATTTATACAAGTTTT+GGG | - | chr4.3:89466015-89466034 | MS.gene053118:intron | 20.0% |
!!! | TGAAAATGATATACATCTTT+TGG | + | chr4.3:89462656-89462675 | None:intergenic | 20.0% |
!!! | TTCAACATTTATACAAGTTT+TGG | - | chr4.3:89466014-89466033 | MS.gene053118:intron | 20.0% |
!!! | TTTTAATAGCCTAATAAGAT+GGG | + | chr4.3:89465499-89465518 | None:intergenic | 20.0% |
!!! | TTTTATGAACAAATTGAGAA+AGG | + | chr4.3:89463757-89463776 | None:intergenic | 20.0% |
! | AAACATAAAATGTGGCATAA+AGG | + | chr4.3:89462357-89462376 | None:intergenic | 25.0% |
! | AAAGCAATAAAGAGACAATA+TGG | + | chr4.3:89464314-89464333 | None:intergenic | 25.0% |
! | AAATGGAAAAATAGTTTGGA+AGG | + | chr4.3:89462549-89462568 | None:intergenic | 25.0% |
! | AAATGTAACAAACCTAAGTT+TGG | + | chr4.3:89466658-89466677 | None:intergenic | 25.0% |
! | AAATTCAACAAACTATCCTA+TGG | + | chr4.3:89463170-89463189 | None:intergenic | 25.0% |
! | AACAACAAATGCAAATATCT+AGG | + | chr4.3:89463368-89463387 | None:intergenic | 25.0% |
! | AAGATGGGAAATTCAAAAAT+GGG | + | chr4.3:89461485-89461504 | None:intergenic | 25.0% |
! | AATGTCATAATTGAACAACA+AGG | + | chr4.3:89466939-89466958 | None:intergenic | 25.0% |
! | ACTAAAGACAAATATAAGCA+TGG | + | chr4.3:89465632-89465651 | None:intergenic | 25.0% |
! | AGAAAAACAGAATATATCAC+AGG | + | chr4.3:89467108-89467127 | None:intergenic | 25.0% |
! | AGGTGTGAAATAATTTGAAA+AGG | + | chr4.3:89464735-89464754 | None:intergenic | 25.0% |
! | AGTATGGAAAATATTTGTTC+TGG | + | chr4.3:89465244-89465263 | None:intergenic | 25.0% |
! | AGTTATTGAATGGTTATAAG+AGG | + | chr4.3:89463710-89463729 | None:intergenic | 25.0% |
! | ATAAAGTATGTGATAGAAAC+TGG | - | chr4.3:89463465-89463484 | MS.gene053118:CDS | 25.0% |
! | GAAAAACAAGTAGTAATCTA+TGG | + | chr4.3:89463141-89463160 | None:intergenic | 25.0% |
! | GAAATATGCAATTTCTGTTT+AGG | - | chr4.3:89464686-89464705 | MS.gene053118:intron | 25.0% |
! | GCTAGATAAATAGAAAAACT+CGG | + | chr4.3:89466246-89466265 | None:intergenic | 25.0% |
! | GTTATTGAATGGTTATAAGA+GGG | + | chr4.3:89463709-89463728 | None:intergenic | 25.0% |
! | TAAAAATCAAATAGAGAGAG+AGG | + | chr4.3:89462840-89462859 | None:intergenic | 25.0% |
! | TACCAAATGGAAAAATAGTT+TGG | + | chr4.3:89462553-89462572 | None:intergenic | 25.0% |
! | TAGATGCAAATGAATATTTG+TGG | - | chr4.3:89466058-89466077 | MS.gene053118:intron | 25.0% |
! | TGAGTACTATTATGTTTCAT+TGG | - | chr4.3:89462516-89462535 | MS.gene053118:intron | 25.0% |
! | TTTATAAGTACATGAAGTGA+AGG | + | chr4.3:89467216-89467235 | None:intergenic | 25.0% |
!! | AAAAGGTTGAAGATATTTTG+TGG | + | chr4.3:89464718-89464737 | None:intergenic | 25.0% |
!! | AATTACATTGACGTTTTACA+TGG | - | chr4.3:89463254-89463273 | MS.gene053118:CDS | 25.0% |
!! | GTTATATTTGAGATTTCTCA+TGG | - | chr4.3:89465264-89465283 | MS.gene053118:intron | 25.0% |
!! | TTTATGCCACATTTTATGTT+TGG | - | chr4.3:89462356-89462375 | MS.gene053118:intron | 25.0% |
!! | TTTTACATGGTCATATTTGA+AGG | - | chr4.3:89463267-89463286 | MS.gene053118:CDS | 25.0% |
!!! | AATGAATCATGAACTAGTTT+TGG | - | chr4.3:89466200-89466219 | MS.gene053118:intron | 25.0% |
!!! | ATGATTCTGTTTTGATTCTA+AGG | - | chr4.3:89464151-89464170 | MS.gene053118:CDS | 25.0% |
!!! | ATTACTACTTGTTTTTCTCA+GGG | - | chr4.3:89463144-89463163 | MS.gene053118:intron | 25.0% |
!!! | CAATTGTTGTTTACTTCATT+TGG | - | chr4.3:89463063-89463082 | MS.gene053118:intron | 25.0% |
!!! | CATTTTATTTTATCACTTGC+AGG | - | chr4.3:89466673-89466692 | MS.gene053118:CDS | 25.0% |
!!! | GATATTTTTATGCCAAACTT+AGG | - | chr4.3:89466643-89466662 | MS.gene053118:intron | 25.0% |
!!! | TATTTGCATTTGTTGTTTTG+TGG | - | chr4.3:89463371-89463390 | MS.gene053118:intron | 25.0% |
!!! | TGAAATAAAAGTATCTCCAA+TGG | + | chr4.3:89463871-89463890 | None:intergenic | 25.0% |
!!! | TTCCAAACTATTTTTCCATT+TGG | - | chr4.3:89462548-89462567 | MS.gene053118:intron | 25.0% |
!!! | TTGGCTTTTTTAAGTTATCT+GGG | - | chr4.3:89464611-89464630 | MS.gene053118:intron | 25.0% |
!!! | TTTGGCTTTTTTAAGTTATC+TGG | - | chr4.3:89464610-89464629 | MS.gene053118:intron | 25.0% |
!!! | TTTTTCATTTTTCTATGACC+TGG | - | chr4.3:89466582-89466601 | MS.gene053118:intron | 25.0% |
AAACAGTTAGCTGATATCTA+AGG | + | chr4.3:89466554-89466573 | None:intergenic | 30.0% | |
AACAAATTGAGAAAGGAAAG+AGG | + | chr4.3:89463750-89463769 | None:intergenic | 30.0% | |
AATCATACACACTTACCAAA+TGG | + | chr4.3:89462566-89462585 | None:intergenic | 30.0% | |
AATGCAAATATCTAGGTCTT+AGG | + | chr4.3:89463361-89463380 | None:intergenic | 30.0% | |
ACAACAATTGAACAATTACC+AGG | + | chr4.3:89463053-89463072 | None:intergenic | 30.0% | |
AGATGGGAAATTCAAAAATG+GGG | + | chr4.3:89461484-89461503 | None:intergenic | 30.0% | |
AGGTTGTTAATGAAGTAAGA+AGG | - | chr4.3:89465689-89465708 | MS.gene053118:CDS | 30.0% | |
ATACTTTCTACAGGATTACA+AGG | - | chr4.3:89465820-89465839 | MS.gene053118:intron | 30.0% | |
ATAGAAACTGGTGTCTATAT+TGG | - | chr4.3:89463477-89463496 | MS.gene053118:CDS | 30.0% | |
ATATTACTAGTGAAACCTGT+GGG | - | chr4.3:89465986-89466005 | MS.gene053118:intron | 30.0% | |
ATCATTTCACCTATTGTAGT+TGG | - | chr4.3:89465923-89465942 | MS.gene053118:intron | 30.0% | |
ATTCTTACCATGGATATGTT+TGG | - | chr4.3:89465162-89465181 | MS.gene053118:intron | 30.0% | |
CAGATATTTCGTATTCTACT+CGG | - | chr4.3:89461528-89461547 | MS.gene053118:intron | 30.0% | |
CTATCACATACTTTATTCTC+TGG | + | chr4.3:89463461-89463480 | None:intergenic | 30.0% | |
CTTAAACTTACCATTATACC+AGG | + | chr4.3:89465730-89465749 | None:intergenic | 30.0% | |
CTTGTAGTCAGTATAATACT+TGG | + | chr4.3:89464902-89464921 | None:intergenic | 30.0% | |
GAAAGTAATATGATAAGGTC+AGG | + | chr4.3:89461792-89461811 | None:intergenic | 30.0% | |
GAAGATGGGAAATTCAAAAA+TGG | + | chr4.3:89461486-89461505 | None:intergenic | 30.0% | |
GTGATGACAAAGACAATAAT+TGG | + | chr4.3:89461630-89461649 | None:intergenic | 30.0% | |
GTGTCTATATTGGTAAGTTT+AGG | - | chr4.3:89463487-89463506 | MS.gene053118:CDS | 30.0% | |
GTTGTTTACTTCATTTGGAA+GGG | - | chr4.3:89463068-89463087 | MS.gene053118:intron | 30.0% | |
TAAACAGTAAGAGCAATAGA+AGG | + | chr4.3:89464755-89464774 | None:intergenic | 30.0% | |
TAAGATGATAATACCTACCA+GGG | + | chr4.3:89461443-89461462 | None:intergenic | 30.0% | |
TAGCAGTAAAGACAAAATCA+TGG | + | chr4.3:89462774-89462793 | None:intergenic | 30.0% | |
TATATTACTAGTGAAACCTG+TGG | - | chr4.3:89465985-89466004 | MS.gene053118:intron | 30.0% | |
TATGGGATTTATCACTTCTA+TGG | - | chr4.3:89463402-89463421 | MS.gene053118:intron | 30.0% | |
TATTAACCTGAACCATTTCA+GGG | + | chr4.3:89461722-89461741 | None:intergenic | 30.0% | |
TCAGCTAACTATGATAAAAC+TGG | + | chr4.3:89462699-89462718 | None:intergenic | 30.0% | |
TCTCTCATACATTCTATTTC+AGG | - | chr4.3:89462029-89462048 | MS.gene053118:intron | 30.0% | |
TCTGAAAACATGATTATTGC+AGG | - | chr4.3:89465561-89465580 | MS.gene053118:intron | 30.0% | |
TGCATCTAATGTGATGATTA+TGG | + | chr4.3:89466046-89466065 | None:intergenic | 30.0% | |
TGCTATTAACAATGTACTAG+TGG | + | chr4.3:89466314-89466333 | None:intergenic | 30.0% | |
TTAAGAGAGATGATAAAACC+TGG | - | chr4.3:89465890-89465909 | MS.gene053118:intron | 30.0% | |
TTATCATAGTTAGCTGAAGT+GGG | - | chr4.3:89462702-89462721 | MS.gene053118:CDS | 30.0% | |
TTCTTGATTATGAACTCTTC+AGG | - | chr4.3:89466271-89466290 | MS.gene053118:CDS | 30.0% | |
TTTAATGCAATTGAGGGAAA+AGG | - | chr4.3:89465519-89465538 | MS.gene053118:intron | 30.0% | |
TTTATCATAGTTAGCTGAAG+TGG | - | chr4.3:89462701-89462720 | MS.gene053118:CDS | 30.0% | |
TTTGGTAAGTGTGTATGATT+TGG | - | chr4.3:89462566-89462585 | MS.gene053118:intron | 30.0% | |
! | ATGATTTTGTCTTTACTGCT+AGG | - | chr4.3:89462773-89462792 | MS.gene053118:CDS | 30.0% |
! | CTATCTTTGCTGTACAATTA+TGG | - | chr4.3:89467002-89467021 | MS.gene053118:CDS | 30.0% |
! | CTGTGGGAATATTTTCTATT+CGG | - | chr4.3:89464450-89464469 | MS.gene053118:intron | 30.0% |
! | TGAATATTTGTGGCTATTTC+AGG | - | chr4.3:89466068-89466087 | MS.gene053118:intron | 30.0% |
! | TGATTTTGTCTTTACTGCTA+GGG | - | chr4.3:89462774-89462793 | MS.gene053118:CDS | 30.0% |
! | TGTGGGAATATTTTCTATTC+GGG | - | chr4.3:89464451-89464470 | MS.gene053118:intron | 30.0% |
! | TGTTGTTTACTTCATTTGGA+AGG | - | chr4.3:89463067-89463086 | MS.gene053118:intron | 30.0% |
! | TTTCTTGGAAGGGAATTTTT+CGG | + | chr4.3:89463639-89463658 | None:intergenic | 30.0% |
! | TTTTCACTATTCAGCTTTTG+TGG | - | chr4.3:89467062-89467081 | MS.gene053118:CDS | 30.0% |
!! | AGGTTTTGTATTCCGAATTT+TGG | - | chr4.3:89466693-89466712 | MS.gene053118:CDS | 30.0% |
!! | GATTACTACTTGTTTTTCTC+AGG | - | chr4.3:89463143-89463162 | MS.gene053118:intron | 30.0% |
!! | GGTTTTGTATTCCGAATTTT+GGG | - | chr4.3:89466694-89466713 | MS.gene053118:CDS | 30.0% |
!! | GTTCATGATTCATTGATTTG+AGG | + | chr4.3:89466194-89466213 | None:intergenic | 30.0% |
!! | TAAGGCATTTTCCATAAAGT+TGG | + | chr4.3:89466536-89466555 | None:intergenic | 30.0% |
!! | TTGAAGGTGTTAATGTTAGA+CGG | - | chr4.3:89463283-89463302 | MS.gene053118:CDS | 30.0% |
!! | TTTGGAGCTATCTTTTACAT+GGG | - | chr4.3:89461591-89461610 | MS.gene053118:intron | 30.0% |
!!! | CTTTTTTAAGTTATCTGGGT+TGG | - | chr4.3:89464615-89464634 | MS.gene053118:intron | 30.0% |
!!! | GGTGATTTTTTATCTGTGTA+TGG | - | chr4.3:89462587-89462606 | MS.gene053118:intron | 30.0% |
!!! | GTCTCTTTATTGCTTTGTTT+TGG | - | chr4.3:89464318-89464337 | MS.gene053118:intron | 30.0% |
!!! | TACAATAGTTTTAGCTGTTC+TGG | - | chr4.3:89464544-89464563 | MS.gene053118:intron | 30.0% |
!!! | TTCTGTTTTGATTCTAAGGT+TGG | - | chr4.3:89464155-89464174 | MS.gene053118:CDS | 30.0% |
AAACATGTAAGGAGGAAGAT+GGG | + | chr4.3:89461500-89461519 | None:intergenic | 35.0% | |
AAATGTTGAATTTCTCCCAC+AGG | + | chr4.3:89466004-89466023 | None:intergenic | 35.0% | |
AACAGTGTCTGGTATTCTTA+TGG | - | chr4.3:89466777-89466796 | MS.gene053118:CDS | 35.0% | |
AAGAGACAATATGGAGTAAC+TGG | + | chr4.3:89464305-89464324 | None:intergenic | 35.0% | |
AAGATGATAATACCTACCAG+GGG | + | chr4.3:89461442-89461461 | None:intergenic | 35.0% | |
AAGGAAGCTGAGAATACAAA+TGG | + | chr4.3:89461652-89461671 | None:intergenic | 35.0% | |
AAGTTCTTGGACCAACTTTA+TGG | - | chr4.3:89466522-89466541 | MS.gene053118:CDS | 35.0% | |
AATTGTAGAAATGAGTCAGC+AGG | - | chr4.3:89465209-89465228 | MS.gene053118:intron | 35.0% | |
ACAGAAAGAAGCAAACACAA+AGG | + | chr4.3:89464085-89464104 | None:intergenic | 35.0% | |
ACGACTTTGATACTTTCTAC+AGG | - | chr4.3:89465811-89465830 | MS.gene053118:intron | 35.0% | |
ACTGGATACAGAACACATTT+AGG | + | chr4.3:89462681-89462700 | None:intergenic | 35.0% | |
AGAGACAATATGGAGTAACT+GGG | + | chr4.3:89464304-89464323 | None:intergenic | 35.0% | |
ATAATCAGTGCCATGATACT+AGG | - | chr4.3:89464239-89464258 | MS.gene053118:intron | 35.0% | |
ATACTAAAGCAGCTGATGTT+GGG | - | chr4.3:89462956-89462975 | MS.gene053118:CDS | 35.0% | |
ATATAGTTCCATACTGTGTC+CGG | + | chr4.3:89461856-89461875 | None:intergenic | 35.0% | |
ATGGCACTAACATAATTGCT+GGG | - | chr4.3:89464965-89464984 | MS.gene053118:intron | 35.0% | |
ATTAACCTGAACCATTTCAG+GGG | + | chr4.3:89461721-89461740 | None:intergenic | 35.0% | |
ATTGATGCTTATGTCAATCC+AGG | - | chr4.3:89463111-89463130 | MS.gene053118:intron | 35.0% | |
CAATAACAGCAGGATTTCTA+GGG | + | chr4.3:89463026-89463045 | None:intergenic | 35.0% | |
CACCCACTTCATAAGATATA+TGG | + | chr4.3:89461679-89461698 | None:intergenic | 35.0% | |
CAGAAATCAAACATGTAAGG+AGG | + | chr4.3:89461508-89461527 | None:intergenic | 35.0% | |
CAGAATCATTATGATACCAC+TGG | + | chr4.3:89464140-89464159 | None:intergenic | 35.0% | |
CATGGTAAGAATATAAGCAG+CGG | + | chr4.3:89465154-89465173 | None:intergenic | 35.0% | |
CGCCATATATCTTATGAAGT+GGG | - | chr4.3:89461674-89461693 | MS.gene053118:intron | 35.0% | |
CTAATAGAACACAGTATGCT+TGG | + | chr4.3:89464641-89464660 | None:intergenic | 35.0% | |
CTCAACGATTACATTGGTAA+TGG | - | chr4.3:89467242-89467261 | MS.gene053118:CDS | 35.0% | |
CTGCAGAAATCAAACATGTA+AGG | + | chr4.3:89461511-89461530 | None:intergenic | 35.0% | |
CTGGATACAGAACACATTTA+GGG | + | chr4.3:89462680-89462699 | None:intergenic | 35.0% | |
CTGTATAGTAGCCCAAAATT+CGG | + | chr4.3:89466708-89466727 | None:intergenic | 35.0% | |
CTTATTGTAGAGATGTCCAT+TGG | - | chr4.3:89463852-89463871 | MS.gene053118:intron | 35.0% | |
CTTGTTGGAAAAGTAGAACA+GGG | - | chr4.3:89462985-89463004 | MS.gene053118:CDS | 35.0% | |
GAAAGAGGAAAGTGGTTATT+TGG | + | chr4.3:89463735-89463754 | None:intergenic | 35.0% | |
GAATAAAAGCCAAAAGATGC+AGG | + | chr4.3:89462812-89462831 | None:intergenic | 35.0% | |
GATGGGAAATTCAAAAATGG+GGG | + | chr4.3:89461483-89461502 | None:intergenic | 35.0% | |
GTAAACTCACCAACTACAAT+AGG | + | chr4.3:89465935-89465954 | None:intergenic | 35.0% | |
GTAAGATGATAATACCTACC+AGG | + | chr4.3:89461444-89461463 | None:intergenic | 35.0% | |
GTACTAGTGGAACAATTACA+AGG | + | chr4.3:89466301-89466320 | None:intergenic | 35.0% | |
GTATCAAAGTCGTTAACAGA+AGG | + | chr4.3:89465804-89465823 | None:intergenic | 35.0% | |
GTATGGAACTATATCCAAGA+TGG | - | chr4.3:89461862-89461881 | MS.gene053118:CDS | 35.0% | |
GTATTAACCTGAACCATTTC+AGG | + | chr4.3:89461723-89461742 | None:intergenic | 35.0% | |
TAATCAGTGCCATGATACTA+GGG | - | chr4.3:89464240-89464259 | MS.gene053118:intron | 35.0% | |
TAGATCTCTTCAATGCCAAA+AGG | + | chr4.3:89466347-89466366 | None:intergenic | 35.0% | |
TATACTAAAGCAGCTGATGT+TGG | - | chr4.3:89462955-89462974 | MS.gene053118:CDS | 35.0% | |
TCAAATGAGTGAACAACAAG+AGG | + | chr4.3:89464416-89464435 | None:intergenic | 35.0% | |
TCATAAGATATATGGCGACA+AGG | + | chr4.3:89461671-89461690 | None:intergenic | 35.0% | |
TCGCCATATATCTTATGAAG+TGG | - | chr4.3:89461673-89461692 | MS.gene053118:intron | 35.0% | |
TCTGTCACTACTAAAGTTCT+TGG | - | chr4.3:89466509-89466528 | MS.gene053118:CDS | 35.0% | |
TGGATACAGAACACATTTAG+GGG | + | chr4.3:89462679-89462698 | None:intergenic | 35.0% | |
TGTTGTTCACTCATTTGATC+TGG | - | chr4.3:89464418-89464437 | MS.gene053118:CDS | 35.0% | |
TTATCAGCTCTTATCGTTGT+TGG | - | chr4.3:89462307-89462326 | MS.gene053118:intron | 35.0% | |
TTGATGCTTATGTCAATCCA+GGG | - | chr4.3:89463112-89463131 | MS.gene053118:intron | 35.0% | |
! | AAGGTTTAGAACGCATGTTA+GGG | + | chr4.3:89461414-89461433 | None:intergenic | 35.0% |
! | ACTGTAGCTTCTTTCCTTTT+AGG | - | chr4.3:89462070-89462089 | MS.gene053118:intron | 35.0% |
! | ATCACACAAGAAACTGACTT+AGG | - | chr4.3:89463586-89463605 | MS.gene053118:CDS | 35.0% |
! | ATGCTTTTCCTTGTTGCATT+TGG | - | chr4.3:89466417-89466436 | MS.gene053118:intron | 35.0% |
! | CACTTCTATGGTCATTGTTT+TGG | - | chr4.3:89463414-89463433 | MS.gene053118:CDS | 35.0% |
! | CTCTTCATTCTTTTACTCCT+CGG | - | chr4.3:89461567-89461586 | MS.gene053118:intron | 35.0% |
! | GAATTTTGGGCTACTATACA+GGG | - | chr4.3:89466707-89466726 | MS.gene053118:CDS | 35.0% |
! | GTGGGAATATTTTCTATTCG+GGG | - | chr4.3:89464452-89464471 | MS.gene053118:intron | 35.0% |
! | GTTTTGTGGAAGAAGCTTAT+GGG | - | chr4.3:89463385-89463404 | MS.gene053118:intron | 35.0% |
! | TAAGGTTTAGAACGCATGTT+AGG | + | chr4.3:89461415-89461434 | None:intergenic | 35.0% |
! | TAGCAGTTGTATACTCCTTT+TGG | - | chr4.3:89466329-89466348 | MS.gene053118:CDS | 35.0% |
! | TGCTTTTCCTTGTTGCATTT+GGG | - | chr4.3:89466418-89466437 | MS.gene053118:intron | 35.0% |
! | TGGTTCAATTTTGCTTTGTG+CGG | - | chr4.3:89464835-89464854 | MS.gene053118:intron | 35.0% |
! | TGTTTTGTGGAAGAAGCTTA+TGG | - | chr4.3:89463384-89463403 | MS.gene053118:intron | 35.0% |
!! | ATAATTGCTGGGGTTAGTTT+GGG | - | chr4.3:89464976-89464995 | MS.gene053118:intron | 35.0% |
!! | TGAAGGTGTTAATGTTAGAC+GGG | - | chr4.3:89463284-89463303 | MS.gene053118:CDS | 35.0% |
!!! | CTTTGGAGCTATCTTTTACA+TGG | - | chr4.3:89461590-89461609 | MS.gene053118:intron | 35.0% |
AACTCGGAGATAAGAGAGAT+AGG | + | chr4.3:89466230-89466249 | None:intergenic | 40.0% | |
AATCAGTGCCATGATACTAG+GGG | - | chr4.3:89464241-89464260 | MS.gene053118:intron | 40.0% | |
ACAGGATTACAAGGAGAAAC+CGG | - | chr4.3:89465829-89465848 | MS.gene053118:intron | 40.0% | |
ACCAAGACTCTCGAATTTCT+TGG | + | chr4.3:89463654-89463673 | None:intergenic | 40.0% | |
AGAACCAATGGCAAATCCTT+TGG | + | chr4.3:89465382-89465401 | None:intergenic | 40.0% | |
AGACTCTCGAATTTCTTGGA+AGG | + | chr4.3:89463650-89463669 | None:intergenic | 40.0% | |
AGATGATAATACCTACCAGG+GGG | + | chr4.3:89461441-89461460 | None:intergenic | 40.0% | |
AGCACTAAACAGAAGGAAAG+AGG | + | chr4.3:89465415-89465434 | None:intergenic | 40.0% | |
AGCTCTTATCGTTGTTGGTA+TGG | - | chr4.3:89462312-89462331 | MS.gene053118:intron | 40.0% | |
ATCCAGCAAAACCTGAACAA+AGG | + | chr4.3:89462099-89462118 | None:intergenic | 40.0% | |
ATCTGGACTAATGACTCCTA+TGG | - | chr4.3:89464484-89464503 | MS.gene053118:intron | 40.0% | |
ATGGAGCTGAAGGATTTATC+CGG | - | chr4.3:89461834-89461853 | MS.gene053118:CDS | 40.0% | |
ATTGCCATAGGATCTTCCAT+AGG | + | chr4.3:89464503-89464522 | None:intergenic | 40.0% | |
CAAACATGTAAGGAGGAAGA+TGG | + | chr4.3:89461501-89461520 | None:intergenic | 40.0% | |
CAATTTGAATGTGCAGAGTG+TGG | + | chr4.3:89463095-89463114 | None:intergenic | 40.0% | |
CACCAAATCCATATCCAACT+AGG | + | chr4.3:89462894-89462913 | None:intergenic | 40.0% | |
CAGCAATTATGTTAGTGCCA+TGG | + | chr4.3:89464966-89464985 | None:intergenic | 40.0% | |
CATGGCACTAACATAATTGC+TGG | - | chr4.3:89464964-89464983 | MS.gene053118:intron | 40.0% | |
CCATGTAAGCACTAAACAGA+AGG | + | chr4.3:89465422-89465441 | None:intergenic | 40.0% | |
CCATTCCTCTGCTTTAATAC+AGG | + | chr4.3:89463552-89463571 | None:intergenic | 40.0% | |
CCTATGGCAATTCTTCAGAA+AGG | - | chr4.3:89464512-89464531 | MS.gene053118:intron | 40.0% | |
CCTGTATTAAAGCAGAGGAA+TGG | - | chr4.3:89463549-89463568 | MS.gene053118:CDS | 40.0% | |
CCTTCTGTTTAGTGCTTACA+TGG | - | chr4.3:89465419-89465438 | MS.gene053118:intron | 40.0% | |
CCTTGTTGGAAAAGTAGAAC+AGG | - | chr4.3:89462984-89463003 | MS.gene053118:CDS | 40.0% | |
CGAGGAGTAAAAGAATGAAG+AGG | + | chr4.3:89461569-89461588 | None:intergenic | 40.0% | |
CGCTGCTTATATTCTTACCA+TGG | - | chr4.3:89465152-89465171 | MS.gene053118:intron | 40.0% | |
CTCAACATAAAGTAACCACC+GGG | + | chr4.3:89464800-89464819 | None:intergenic | 40.0% | |
CTCCTAGTTGGATATGGATT+TGG | - | chr4.3:89462889-89462908 | MS.gene053118:intron | 40.0% | |
CTGCTTTAATACAGGATTGC+AGG | + | chr4.3:89463544-89463563 | None:intergenic | 40.0% | |
CTTAGGCACTAAGAACAGAT+TGG | - | chr4.3:89463603-89463622 | MS.gene053118:CDS | 40.0% | |
GACACTTTCAGGCTGATAAT+AGG | + | chr4.3:89465307-89465326 | None:intergenic | 40.0% | |
GACTCTCGAATTTCTTGGAA+GGG | + | chr4.3:89463649-89463668 | None:intergenic | 40.0% | |
GATCTGGTAGTTTCATCTGT+GGG | - | chr4.3:89464434-89464453 | MS.gene053118:CDS | 40.0% | |
GATGAAGATATCATGGAGAC+CGG | - | chr4.3:89461361-89461380 | MS.gene053118:CDS | 40.0% | |
GATGATAAAACCTGGTGCTT+TGG | - | chr4.3:89465898-89465917 | MS.gene053118:intron | 40.0% | |
GATGCTCTCAACGATTACAT+TGG | - | chr4.3:89467236-89467255 | MS.gene053118:CDS | 40.0% | |
GCAAAATTGAACCATGCTGA+AGG | + | chr4.3:89464829-89464848 | None:intergenic | 40.0% | |
GCAATAACAGCAGGATTTCT+AGG | + | chr4.3:89463027-89463046 | None:intergenic | 40.0% | |
GCAATCCTGTATTAAAGCAG+AGG | - | chr4.3:89463544-89463563 | MS.gene053118:CDS | 40.0% | |
GCTCAACATAAAGTAACCAC+CGG | + | chr4.3:89464801-89464820 | None:intergenic | 40.0% | |
GCTGGACTAATAGATGAAAC+AGG | - | chr4.3:89465072-89465091 | MS.gene053118:intron | 40.0% | |
GTACTTCTTTGCATTATCCC+AGG | + | chr4.3:89466830-89466849 | None:intergenic | 40.0% | |
GTAGTAATCTATGGAAACCC+TGG | + | chr4.3:89463132-89463151 | None:intergenic | 40.0% | |
GTATTAAAGCAGAGGAATGG+TGG | - | chr4.3:89463552-89463571 | MS.gene053118:CDS | 40.0% | |
GTTCTGCACACCTGTTTAAA+AGG | + | chr4.3:89465471-89465490 | None:intergenic | 40.0% | |
GTTGTTGGTATGGCTGTAAT+CGG | - | chr4.3:89462322-89462341 | MS.gene053118:intron | 40.0% | |
GTTTAGTGCTTACATGGATG+AGG | - | chr4.3:89465425-89465444 | MS.gene053118:intron | 40.0% | |
TAAGAAGGCAGTTCATTGAG+AGG | - | chr4.3:89465704-89465723 | MS.gene053118:CDS | 40.0% | |
TAATTACTCTGCAGTCTACC+CGG | - | chr4.3:89464779-89464798 | MS.gene053118:intron | 40.0% | |
TACTAAAGCAGCTGATGTTG+GGG | - | chr4.3:89462957-89462976 | MS.gene053118:CDS | 40.0% | |
TATGATACCACTGGAAGTAG+AGG | + | chr4.3:89464131-89464150 | None:intergenic | 40.0% | |
TCCAAGAAATTCGAGAGTCT+TGG | - | chr4.3:89463650-89463669 | MS.gene053118:CDS | 40.0% | |
TCCAGCAAAACCTGAACAAA+GGG | + | chr4.3:89462098-89462117 | None:intergenic | 40.0% | |
TCCCAGCCAAACATAAAATG+TGG | + | chr4.3:89462365-89462384 | None:intergenic | 40.0% | |
TCTTCTGATTCAGATCCATC+TGG | - | chr4.3:89464377-89464396 | MS.gene053118:CDS | 40.0% | |
TGAGAAAGGAAAGAGGAAAG+TGG | + | chr4.3:89463743-89463762 | None:intergenic | 40.0% | |
TGATCTGGTAGTTTCATCTG+TGG | - | chr4.3:89464433-89464452 | MS.gene053118:CDS | 40.0% | |
TGGCACTAACATAATTGCTG+GGG | - | chr4.3:89464966-89464985 | MS.gene053118:intron | 40.0% | |
TTAACCTGAACCATTTCAGG+GGG | + | chr4.3:89461720-89461739 | None:intergenic | 40.0% | |
TTGTCTTTACTGCTAGGGAT+GGG | - | chr4.3:89462779-89462798 | MS.gene053118:CDS | 40.0% | |
TTTAAACAGGTGTGCAGAAC+TGG | - | chr4.3:89465471-89465490 | MS.gene053118:intron | 40.0% | |
TTTCTATGACCTGGTCTGAT+TGG | - | chr4.3:89466591-89466610 | MS.gene053118:intron | 40.0% | |
TTTGTCTTTACTGCTAGGGA+TGG | - | chr4.3:89462778-89462797 | MS.gene053118:CDS | 40.0% | |
! | ACCAACGAAAACTTCTGGAA+TGG | + | chr4.3:89465596-89465615 | None:intergenic | 40.0% |
! | ATTCCAGAAGTTTTCGTTGG+TGG | - | chr4.3:89465595-89465614 | MS.gene053118:CDS | 40.0% |
! | ATTCTTTTACTCCTCGGCTT+TGG | - | chr4.3:89461573-89461592 | MS.gene053118:intron | 40.0% |
! | ATTTTATGTTTGGCTGGGAG+TGG | - | chr4.3:89462366-89462385 | MS.gene053118:intron | 40.0% |
! | CAGGTTTTGCTGGATATGTA+GGG | - | chr4.3:89462104-89462123 | MS.gene053118:intron | 40.0% |
! | CCTTTCTGAAGAATTGCCAT+AGG | + | chr4.3:89464515-89464534 | None:intergenic | 40.0% |
! | CGAATTTTGGGCTACTATAC+AGG | - | chr4.3:89466706-89466725 | MS.gene053118:CDS | 40.0% |
! | GCAAAGAAGTACATAGAGAC+CGG | - | chr4.3:89466838-89466857 | MS.gene053118:intron | 40.0% |
! | GCCACATTTTATGTTTGGCT+GGG | - | chr4.3:89462361-89462380 | MS.gene053118:intron | 40.0% |
! | GGTTCAATTTTGCTTTGTGC+GGG | - | chr4.3:89464836-89464855 | MS.gene053118:intron | 40.0% |
! | TCACAGCGTACATTTTTGTC+TGG | - | chr4.3:89464872-89464891 | MS.gene053118:intron | 40.0% |
! | TCAGGTTTTGCTGGATATGT+AGG | - | chr4.3:89462103-89462122 | MS.gene053118:intron | 40.0% |
! | TCTAAGGTTGGAGACAATGT+GGG | - | chr4.3:89464167-89464186 | MS.gene053118:CDS | 40.0% |
! | TGCCACATTTTATGTTTGGC+TGG | - | chr4.3:89462360-89462379 | MS.gene053118:intron | 40.0% |
! | TTCCAGAAGTTTTCGTTGGT+GGG | - | chr4.3:89465596-89465615 | MS.gene053118:CDS | 40.0% |
! | TTCTCGCGAACCTTTTAAAC+AGG | - | chr4.3:89465458-89465477 | MS.gene053118:intron | 40.0% |
! | TTTTATGTTTGGCTGGGAGT+GGG | - | chr4.3:89462367-89462386 | MS.gene053118:intron | 40.0% |
!! | ACTAAGAACAGATTGGTCTG+CGG | - | chr4.3:89463610-89463629 | MS.gene053118:CDS | 40.0% |
!! | CATAATTGCTGGGGTTAGTT+TGG | - | chr4.3:89464975-89464994 | MS.gene053118:intron | 40.0% |
!! | CCTGTTCTACTTTTCCAACA+AGG | + | chr4.3:89462987-89463006 | None:intergenic | 40.0% |
!! | TAATTGCTGGGGTTAGTTTG+GGG | - | chr4.3:89464977-89464996 | MS.gene053118:intron | 40.0% |
!! | TTAGCTCTTTCTAGCTCTAC+TGG | - | chr4.3:89464940-89464959 | MS.gene053118:intron | 40.0% |
!! | TTCTAAGGTTGGAGACAATG+TGG | - | chr4.3:89464166-89464185 | MS.gene053118:CDS | 40.0% |
!!! | GTTTTAGCTGTTCTGGCATT+TGG | - | chr4.3:89464551-89464570 | MS.gene053118:intron | 40.0% |
AAAAGATAGCTCCAAAGCCG+AGG | + | chr4.3:89461587-89461606 | None:intergenic | 45.0% | |
AACAGATCACCAATCAGACC+AGG | + | chr4.3:89466603-89466622 | None:intergenic | 45.0% | |
AACCCACCAACGAAAACTTC+TGG | + | chr4.3:89465601-89465620 | None:intergenic | 45.0% | |
AAGCTTCCTGTTGAGGAGTT+GGG | + | chr4.3:89461934-89461953 | None:intergenic | 45.0% | |
AAGGTCAGGACAAGAGTTGA+TGG | + | chr4.3:89461778-89461797 | None:intergenic | 45.0% | |
AATGAGTCAGCAGGTAGTTC+TGG | - | chr4.3:89465218-89465237 | MS.gene053118:intron | 45.0% | |
AATGGCAAATCCTTTGGTGG+TGG | + | chr4.3:89465376-89465395 | None:intergenic | 45.0% | |
ACAACTTTAGCCCCGAGTAA+GGG | + | chr4.3:89466736-89466755 | None:intergenic | 45.0% | |
ACCAATGGCAAATCCTTTGG+TGG | + | chr4.3:89465379-89465398 | None:intergenic | 45.0% | |
ACCACCAAAGGATTTGCCAT+TGG | - | chr4.3:89465375-89465394 | MS.gene053118:intron | 45.0% | |
ACCTCTCTCTCATTCTTGGA+AGG | + | chr4.3:89463682-89463701 | None:intergenic | 45.0% | |
AGAGACCTCTCTCTCATTCT+TGG | + | chr4.3:89463686-89463705 | None:intergenic | 45.0% | |
AGCAAACAGTGCAACAAAGG+AGG | + | chr4.3:89462917-89462936 | None:intergenic | 45.0% | |
AGCAAGCAACATAGCCATCT+TGG | + | chr4.3:89461879-89461898 | None:intergenic | 45.0% | |
ATAGCTGATGCCATACGAGA+TGG | - | chr4.3:89461815-89461834 | MS.gene053118:CDS | 45.0% | |
ATCAGTGCCATGATACTAGG+GGG | - | chr4.3:89464242-89464261 | MS.gene053118:intron | 45.0% | |
CAAGGACATCAGTGATCTCT+CGG | + | chr4.3:89465329-89465348 | None:intergenic | 45.0% | |
CAGTTAGCCCAAATGCAACA+AGG | + | chr4.3:89466428-89466447 | None:intergenic | 45.0% | |
CATGATACTAGGGGGAACAA+TGG | - | chr4.3:89464250-89464269 | MS.gene053118:intron | 45.0% | |
CATTGAGAGGCCTGGTATAA+TGG | - | chr4.3:89465717-89465736 | MS.gene053118:CDS | 45.0% | |
CATTGTTCCCCCTAGTATCA+TGG | + | chr4.3:89464252-89464271 | None:intergenic | 45.0% | |
CCATATCCAACTAGGAGAAG+AGG | + | chr4.3:89462886-89462905 | None:intergenic | 45.0% | |
CCTCCAGCATTATCAGCTAT+CGG | + | chr4.3:89465189-89465208 | None:intergenic | 45.0% | |
CCTCTCTCTCATTCTTGGAA+GGG | + | chr4.3:89463681-89463700 | None:intergenic | 45.0% | |
CCTCTTCTCCTAGTTGGATA+TGG | - | chr4.3:89462883-89462902 | MS.gene053118:intron | 45.0% | |
CGCATGTTAGGGAAAGTTCT+TGG | + | chr4.3:89461403-89461422 | None:intergenic | 45.0% | |
CTCCAGCATTATCAGCTATC+GGG | + | chr4.3:89465188-89465207 | None:intergenic | 45.0% | |
CTGAGCAAACAGTGCAACAA+AGG | + | chr4.3:89462920-89462939 | None:intergenic | 45.0% | |
CTGATGTTTGCAACAGTGTC+TGG | - | chr4.3:89466766-89466785 | MS.gene053118:CDS | 45.0% | |
GACCAGCAGTGTCTTTGAAT+GGG | + | chr4.3:89467194-89467213 | None:intergenic | 45.0% | |
GACTCCTATGGAAGATCCTA+TGG | - | chr4.3:89464496-89464515 | MS.gene053118:intron | 45.0% | |
GATGAAACAGGAAACCCAAC+TGG | - | chr4.3:89465084-89465103 | MS.gene053118:intron | 45.0% | |
GATGATAATACCTACCAGGG+GGG | + | chr4.3:89461440-89461459 | None:intergenic | 45.0% | |
GCACAACGCTGTAAAATCGA+AGG | - | chr4.3:89464272-89464291 | MS.gene053118:intron | 45.0% | |
GCTCACAAAGCAGCAATAAC+AGG | - | chr4.3:89466886-89466905 | MS.gene053118:intron | 45.0% | |
GGAAACAAGATGAAGCCAGA+TGG | + | chr4.3:89464395-89464414 | None:intergenic | 45.0% | |
GGAAAGTTCTTGGCCTATCA+TGG | + | chr4.3:89461393-89461412 | None:intergenic | 45.0% | |
GGATTTATCCGGACACAGTA+TGG | - | chr4.3:89461845-89461864 | MS.gene053118:CDS | 45.0% | |
GTTGCACTGTTTGCTCAGTT+GGG | - | chr4.3:89462922-89462941 | MS.gene053118:CDS | 45.0% | |
TAACAACCTCCTGTGCAGTT+CGG | + | chr4.3:89465678-89465697 | None:intergenic | 45.0% | |
TATACAGGGCAACCCTTACT+CGG | - | chr4.3:89466721-89466740 | MS.gene053118:CDS | 45.0% | |
TATCGGGCCAAACATATCCA+TGG | + | chr4.3:89465172-89465191 | None:intergenic | 45.0% | |
TCAGTGACCTTCATTGAACC+AGG | + | chr4.3:89462397-89462416 | None:intergenic | 45.0% | |
TGCAATTGAGGGAAAAGGAG+AGG | - | chr4.3:89465524-89465543 | MS.gene053118:intron | 45.0% | |
TGCTGGATATGTAGGGATGT+GGG | - | chr4.3:89462111-89462130 | MS.gene053118:intron | 45.0% | |
TGTTGCACTGTTTGCTCAGT+TGG | - | chr4.3:89462921-89462940 | MS.gene053118:CDS | 45.0% | |
TTGCTGGATATGTAGGGATG+TGG | - | chr4.3:89462110-89462129 | MS.gene053118:intron | 45.0% | |
! | CTTTTTCTGAACACAGCTGG+TGG | - | chr4.3:89466802-89466821 | MS.gene053118:CDS | 45.0% |
! | GAAATGATTGCCAAAGCACC+AGG | + | chr4.3:89465911-89465930 | None:intergenic | 45.0% |
! | GAACTGGCTCCCATCTTATT+AGG | - | chr4.3:89465487-89465506 | MS.gene053118:intron | 45.0% |
! | GCCATTCCAGAAGTTTTCGT+TGG | - | chr4.3:89465592-89465611 | MS.gene053118:CDS | 45.0% |
!! | AAATCCTTTGGTGGTGGCTT+TGG | + | chr4.3:89465370-89465389 | None:intergenic | 45.0% |
!! | CTGAACAAAGGGCACCTAAA+AGG | + | chr4.3:89462087-89462106 | None:intergenic | 45.0% |
!! | CTTGTTTTTCTCAGGGCCAT+AGG | - | chr4.3:89463151-89463170 | MS.gene053118:intron | 45.0% |
!! | CTTTTAGGTGCCCTTTGTTC+AGG | - | chr4.3:89462085-89462104 | MS.gene053118:intron | 45.0% |
!! | GGAGCATTACCTGCATCTTT+TGG | - | chr4.3:89462800-89462819 | MS.gene053118:intron | 45.0% |
!! | GGATTTCTAGGGTCATCTTC+AGG | + | chr4.3:89463015-89463034 | None:intergenic | 45.0% |
!! | TTTGCTTTGTGCGGGTTGAT+TGG | - | chr4.3:89464844-89464863 | MS.gene053118:intron | 45.0% |
!!! | GCACTTTTTCTGAACACAGC+TGG | - | chr4.3:89466799-89466818 | MS.gene053118:CDS | 45.0% |
AAACAGGAAACCCAACTGGC+GGG | - | chr4.3:89465088-89465107 | MS.gene053118:intron | 50.0% | |
ACAACCAAAGCCACCACCAA+AGG | - | chr4.3:89465363-89465382 | MS.gene053118:intron | 50.0% | |
ACCACTGGAAGTAGAGGACT+AGG | + | chr4.3:89464125-89464144 | None:intergenic | 50.0% | |
ACCAGGTCAGCAATAACAGC+AGG | + | chr4.3:89463036-89463055 | None:intergenic | 50.0% | |
ACTCCTCAACAGGAAGCTTC+TGG | - | chr4.3:89461935-89461954 | MS.gene053118:intron | 50.0% | |
ACTGATGTCCTTGATGCCGT+GGG | - | chr4.3:89465336-89465355 | MS.gene053118:intron | 50.0% | |
AGACCGGCACTTACCATGAT+AGG | - | chr4.3:89461377-89461396 | MS.gene053118:CDS | 50.0% | |
AGCACTAGAGACTCTGACGT+TGG | + | chr4.3:89462149-89462168 | None:intergenic | 50.0% | |
AGCTGTTCTGGCATTTGGTC+TGG | - | chr4.3:89464556-89464575 | MS.gene053118:intron | 50.0% | |
AGGGAAAAGGAGAGGAAGTG+TGG | - | chr4.3:89465532-89465551 | MS.gene053118:intron | 50.0% | |
ATACAGGGCAACCCTTACTC+GGG | - | chr4.3:89466722-89466741 | MS.gene053118:CDS | 50.0% | |
ATGCCAGAAGCTTCCTGTTG+AGG | + | chr4.3:89461941-89461960 | None:intergenic | 50.0% | |
ATTCGGGGTACACGTGAATC+TGG | - | chr4.3:89464467-89464486 | MS.gene053118:intron | 50.0% | |
CAACAGGAAGCTTCTGGCAT+GGG | - | chr4.3:89461941-89461960 | MS.gene053118:intron | 50.0% | |
CAATCGCCACACTGATGACA+AGG | + | chr4.3:89465026-89465045 | None:intergenic | 50.0% | |
CACAACTTTAGCCCCGAGTA+AGG | + | chr4.3:89466737-89466756 | None:intergenic | 50.0% | |
CATCAGTGTGGCGATTGTCT+CGG | - | chr4.3:89465029-89465048 | MS.gene053118:intron | 50.0% | |
CCACTGGAAGTAGAGGACTA+GGG | + | chr4.3:89464124-89464143 | None:intergenic | 50.0% | |
CCCTTCCAAGAATGAGAGAG+AGG | - | chr4.3:89463678-89463697 | MS.gene053118:CDS | 50.0% | |
CTACAGATAGCTACTCGAGC+AGG | - | chr4.3:89462280-89462299 | MS.gene053118:intron | 50.0% | |
CTTACTCGGGGCTAAAGTTG+TGG | - | chr4.3:89466735-89466754 | MS.gene053118:CDS | 50.0% | |
GAAACAGGAAACCCAACTGG+CGG | - | chr4.3:89465087-89465106 | MS.gene053118:intron | 50.0% | |
GAAAGAGCTAATGTGCGCAC+AGG | + | chr4.3:89464931-89464950 | None:intergenic | 50.0% | |
GAAGCTTCCTGTTGAGGAGT+TGG | + | chr4.3:89461935-89461954 | None:intergenic | 50.0% | |
GACCCATTCAAAGACACTGC+TGG | - | chr4.3:89467189-89467208 | MS.gene053118:intron | 50.0% | |
GCAACACAGCGAGCATAATC+CGG | + | chr4.3:89465851-89465870 | None:intergenic | 50.0% | |
GGACCAGCAGTGTCTTTGAA+TGG | + | chr4.3:89467195-89467214 | None:intergenic | 50.0% | |
GGCACAGCTGTAGCAACAAT+GGG | - | chr4.3:89465117-89465136 | MS.gene053118:intron | 50.0% | |
GTGATCTCTCGGACACTTTC+AGG | + | chr4.3:89465318-89465337 | None:intergenic | 50.0% | |
TACATAGAGACCGGAGCTCT+TGG | - | chr4.3:89466847-89466866 | MS.gene053118:intron | 50.0% | |
TCAACAGGAAGCTTCTGGCA+TGG | - | chr4.3:89461940-89461959 | MS.gene053118:intron | 50.0% | |
TCAGTGCCTCTTCTCCTAGT+TGG | - | chr4.3:89462877-89462896 | MS.gene053118:intron | 50.0% | |
TCCTGCTGTTATTGCTGACC+TGG | - | chr4.3:89463032-89463051 | MS.gene053118:CDS | 50.0% | |
TCCTTCAGCTCCATCTCGTA+TGG | + | chr4.3:89461828-89461847 | None:intergenic | 50.0% | |
TGGCACAGCTGTAGCAACAA+TGG | - | chr4.3:89465116-89465135 | MS.gene053118:intron | 50.0% | |
TGGCCTATCATGGTAAGTGC+CGG | + | chr4.3:89461383-89461402 | None:intergenic | 50.0% | |
TGGGTGCTCGCTAAAGATGA+GGG | - | chr4.3:89461693-89461712 | MS.gene053118:intron | 50.0% | |
TTCTAAACCTTACACCCCCC+TGG | - | chr4.3:89461423-89461442 | MS.gene053118:CDS | 50.0% | |
TTGAGCAAGCACCTTCAGCA+TGG | - | chr4.3:89464815-89464834 | MS.gene053118:intron | 50.0% | |
TTGTGTTACCCACGGCATCA+AGG | + | chr4.3:89465347-89465366 | None:intergenic | 50.0% | |
! | AGTTTGGGGCTGGAATCTAC+TGG | - | chr4.3:89464991-89465010 | MS.gene053118:intron | 50.0% |
! | CCGATAGCTGATAATGCTGG+AGG | - | chr4.3:89465186-89465205 | MS.gene053118:intron | 50.0% |
! | GGCTTTGGTTGTGTTACCCA+CGG | + | chr4.3:89465355-89465374 | None:intergenic | 50.0% |
!! | ACTAGGAGAAGAGGCACTGA+CGG | + | chr4.3:89462877-89462896 | None:intergenic | 50.0% |
!! | CTTTCTAGCTCTACTGGCCA+TGG | - | chr4.3:89464946-89464965 | MS.gene053118:intron | 50.0% |
!! | GCCCTTTGTTCAGGTTTTGC+TGG | - | chr4.3:89462094-89462113 | MS.gene053118:intron | 50.0% |
!! | GCTGGAATCTACTGGTCTTC+CGG | - | chr4.3:89464999-89465018 | MS.gene053118:intron | 50.0% |
!! | GTCTTCAAGAGAGGCATTGC+AGG | - | chr4.3:89462177-89462196 | MS.gene053118:intron | 50.0% |
!!! | AGTTTTCGTTGGTGGGTTGC+TGG | - | chr4.3:89465603-89465622 | MS.gene053118:CDS | 50.0% |
!!! | GTTTTCGTTGGTGGGTTGCT+GGG | - | chr4.3:89465604-89465623 | MS.gene053118:CDS | 50.0% |
AAACCTTACACCCCCCTGGT+AGG | - | chr4.3:89461427-89461446 | MS.gene053118:CDS | 55.0% | |
AGATGAGGGTCCCCCTGAAA+TGG | - | chr4.3:89461707-89461726 | MS.gene053118:intron | 55.0% | |
AGGAAGCTTCTGGCATGGGA+AGG | - | chr4.3:89461945-89461964 | MS.gene053118:intron | 55.0% | |
AGGCAGTTCATTGAGAGGCC+TGG | - | chr4.3:89465709-89465728 | MS.gene053118:CDS | 55.0% | |
ATAGAGACCGGAGCTCTTGG+AGG | - | chr4.3:89466850-89466869 | MS.gene053118:intron | 55.0% | |
CACTGATGTCCTTGATGCCG+TGG | - | chr4.3:89465335-89465354 | MS.gene053118:intron | 55.0% | |
CAGATAGCTACTCGAGCAGG+TGG | - | chr4.3:89462283-89462302 | MS.gene053118:intron | 55.0% | |
CCCTAGTCCTCTACTTCCAG+TGG | - | chr4.3:89464121-89464140 | MS.gene053118:CDS | 55.0% | |
CTGGAAGTAGAGGACTAGGG+AGG | + | chr4.3:89464121-89464140 | None:intergenic | 55.0% | |
CTGTTTGCTCAGTTGGGTGG+TGG | - | chr4.3:89462928-89462947 | MS.gene053118:CDS | 55.0% | |
GAGTCTCTAGTGCTGCGAGA+CGG | - | chr4.3:89462155-89462174 | MS.gene053118:intron | 55.0% | |
GATGTTGGGGCAGACCTTGT+TGG | - | chr4.3:89462970-89462989 | MS.gene053118:CDS | 55.0% | |
GCACTGTTTGCTCAGTTGGG+TGG | - | chr4.3:89462925-89462944 | MS.gene053118:CDS | 55.0% | |
GCCACACTGATGACAAGGAC+CGG | + | chr4.3:89465021-89465040 | None:intergenic | 55.0% | |
GCCATACGAGATGGAGCTGA+AGG | - | chr4.3:89461824-89461843 | MS.gene053118:CDS | 55.0% | |
GGGCACACCTGGTTCAATGA+AGG | - | chr4.3:89462387-89462406 | MS.gene053118:intron | 55.0% | |
GTGGGTGCTCGCTAAAGATG+AGG | - | chr4.3:89461692-89461711 | MS.gene053118:intron | 55.0% | |
TACAGGGCAACCCTTACTCG+GGG | - | chr4.3:89466723-89466742 | MS.gene053118:CDS | 55.0% | |
TCCGGTCCTTGTCATCAGTG+TGG | - | chr4.3:89465017-89465036 | MS.gene053118:intron | 55.0% | |
TGCGAGACGGTCTTCAAGAG+AGG | - | chr4.3:89462168-89462187 | MS.gene053118:intron | 55.0% | |
TGGCTCCCATCTTCCTGTGA+TGG | - | chr4.3:89467262-89467281 | MS.gene053118:CDS | 55.0% | |
TTACTCTGCAGTCTACCCGG+TGG | - | chr4.3:89464782-89464801 | MS.gene053118:intron | 55.0% | |
! | ATACCTACCAGGGGGGTGTA+AGG | + | chr4.3:89461433-89461452 | None:intergenic | 55.0% |
! | ATTGTCTCGGCCTACTGGCT+GGG | - | chr4.3:89465042-89465061 | MS.gene053118:intron | 55.0% |
! | GGCCCGATAGCTGATAATGC+TGG | - | chr4.3:89465183-89465202 | MS.gene053118:intron | 55.0% |
! | GTGGGAGATTGTGCTGCTAG+AGG | - | chr4.3:89464185-89464204 | MS.gene053118:CDS | 55.0% |
ACCGGAGCTCTTGGAGGCAA+GGG | - | chr4.3:89466856-89466875 | MS.gene053118:intron | 60.0% | |
AGCAGTCTGTCCCAGCCAGT+AGG | + | chr4.3:89465055-89465074 | None:intergenic | 60.0% | |
CTGTGCAGTTCGGCCAACAG+CGG | + | chr4.3:89465668-89465687 | None:intergenic | 60.0% | |
GATTGTCTCGGCCTACTGGC+TGG | - | chr4.3:89465041-89465060 | MS.gene053118:intron | 60.0% | |
GGCAAGCGCAGCAGAACCAA+TGG | + | chr4.3:89465394-89465413 | None:intergenic | 60.0% | |
GGGTCCCCCTGAAATGGTTC+AGG | - | chr4.3:89461713-89461732 | MS.gene053118:intron | 60.0% | |
TCCCTTGCCTCCAAGAGCTC+CGG | + | chr4.3:89466860-89466879 | None:intergenic | 60.0% | |
TCGCAGCCCAACTCCTCAAC+AGG | - | chr4.3:89461925-89461944 | MS.gene053118:intron | 60.0% | |
TGCCAAACAGCCCGCCAGTT+GGG | + | chr4.3:89465101-89465120 | None:intergenic | 60.0% | |
TGGCGATTGTCTCGGCCTAC+TGG | - | chr4.3:89465037-89465056 | MS.gene053118:intron | 60.0% | |
TGTTGGCCGAACTGCACAGG+AGG | - | chr4.3:89465669-89465688 | MS.gene053118:CDS | 60.0% | |
! | GAACACAGCTGGTGGTGCCT+GGG | - | chr4.3:89466810-89466829 | MS.gene053118:intron | 60.0% |
! | TACTGGCTGGGACAGACTGC+TGG | - | chr4.3:89465054-89465073 | MS.gene053118:intron | 60.0% |
! | TGAACACAGCTGGTGGTGCC+TGG | - | chr4.3:89466809-89466828 | MS.gene053118:intron | 60.0% |
!! | AACCCAACTGGCGGGCTGTT+TGG | - | chr4.3:89465096-89465115 | MS.gene053118:intron | 60.0% |
!! | TGCTGGGGTTAGTTTGGGGC+TGG | - | chr4.3:89464981-89465000 | MS.gene053118:intron | 60.0% |
CGCTGTTGGCCGAACTGCAC+AGG | - | chr4.3:89465666-89465685 | MS.gene053118:CDS | 65.0% | |
GACCGGAGCTCTTGGAGGCA+AGG | - | chr4.3:89466855-89466874 | MS.gene053118:intron | 65.0% | |
GTGCCAAACAGCCCGCCAGT+TGG | + | chr4.3:89465102-89465121 | None:intergenic | 65.0% | |
TGGCTGGGAGTGGGCACACC+TGG | - | chr4.3:89462376-89462395 | MS.gene053118:intron | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 89461355 | 89467281 | 89461355 | ID=MS.gene053118 |
chr4.3 | mRNA | 89461355 | 89467281 | 89461355 | ID=MS.gene053118.t1;Parent=MS.gene053118 |
chr4.3 | exon | 89467192 | 89467281 | 89467192 | ID=MS.gene053118.t1.exon1;Parent=MS.gene053118.t1 |
chr4.3 | CDS | 89467192 | 89467281 | 89467192 | ID=cds.MS.gene053118.t1;Parent=MS.gene053118.t1 |
chr4.3 | exon | 89466902 | 89467105 | 89466902 | ID=MS.gene053118.t1.exon2;Parent=MS.gene053118.t1 |
chr4.3 | CDS | 89466902 | 89467105 | 89466902 | ID=cds.MS.gene053118.t1;Parent=MS.gene053118.t1 |
chr4.3 | exon | 89466670 | 89466821 | 89466670 | ID=MS.gene053118.t1.exon3;Parent=MS.gene053118.t1 |
chr4.3 | CDS | 89466670 | 89466821 | 89466670 | ID=cds.MS.gene053118.t1;Parent=MS.gene053118.t1 |
chr4.3 | exon | 89466438 | 89466585 | 89466438 | ID=MS.gene053118.t1.exon4;Parent=MS.gene053118.t1 |
chr4.3 | CDS | 89466438 | 89466585 | 89466438 | ID=cds.MS.gene053118.t1;Parent=MS.gene053118.t1 |
chr4.3 | exon | 89466218 | 89466350 | 89466218 | ID=MS.gene053118.t1.exon5;Parent=MS.gene053118.t1 |
chr4.3 | CDS | 89466218 | 89466350 | 89466218 | ID=cds.MS.gene053118.t1;Parent=MS.gene053118.t1 |
chr4.3 | exon | 89465583 | 89465755 | 89465583 | ID=MS.gene053118.t1.exon6;Parent=MS.gene053118.t1 |
chr4.3 | CDS | 89465583 | 89465755 | 89465583 | ID=cds.MS.gene053118.t1;Parent=MS.gene053118.t1 |
chr4.3 | exon | 89464343 | 89464463 | 89464343 | ID=MS.gene053118.t1.exon7;Parent=MS.gene053118.t1 |
chr4.3 | CDS | 89464343 | 89464463 | 89464343 | ID=cds.MS.gene053118.t1;Parent=MS.gene053118.t1 |
chr4.3 | exon | 89464059 | 89464246 | 89464059 | ID=MS.gene053118.t1.exon8;Parent=MS.gene053118.t1 |
chr4.3 | CDS | 89464059 | 89464246 | 89464059 | ID=cds.MS.gene053118.t1;Parent=MS.gene053118.t1 |
chr4.3 | exon | 89463406 | 89463843 | 89463406 | ID=MS.gene053118.t1.exon9;Parent=MS.gene053118.t1 |
chr4.3 | CDS | 89463406 | 89463843 | 89463406 | ID=cds.MS.gene053118.t1;Parent=MS.gene053118.t1 |
chr4.3 | exon | 89463157 | 89463321 | 89463157 | ID=MS.gene053118.t1.exon10;Parent=MS.gene053118.t1 |
chr4.3 | CDS | 89463157 | 89463321 | 89463157 | ID=cds.MS.gene053118.t1;Parent=MS.gene053118.t1 |
chr4.3 | exon | 89462898 | 89463053 | 89462898 | ID=MS.gene053118.t1.exon11;Parent=MS.gene053118.t1 |
chr4.3 | CDS | 89462898 | 89463053 | 89462898 | ID=cds.MS.gene053118.t1;Parent=MS.gene053118.t1 |
chr4.3 | exon | 89462692 | 89462803 | 89462692 | ID=MS.gene053118.t1.exon12;Parent=MS.gene053118.t1 |
chr4.3 | CDS | 89462692 | 89462803 | 89462692 | ID=cds.MS.gene053118.t1;Parent=MS.gene053118.t1 |
chr4.3 | exon | 89461722 | 89461941 | 89461722 | ID=MS.gene053118.t1.exon13;Parent=MS.gene053118.t1 |
chr4.3 | CDS | 89461722 | 89461941 | 89461722 | ID=cds.MS.gene053118.t1;Parent=MS.gene053118.t1 |
chr4.3 | exon | 89461355 | 89461454 | 89461355 | ID=MS.gene053118.t1.exon14;Parent=MS.gene053118.t1 |
chr4.3 | CDS | 89461355 | 89461454 | 89461355 | ID=cds.MS.gene053118.t1;Parent=MS.gene053118.t1 |
Gene Sequence |
Protein sequence |