Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene034421.t1 | XP_024631443.1 | 97.1 | 382 | 11 | 0 | 1 | 382 | 1 | 382 | 5.90E-199 | 703.4 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene034421.t1 | Q9XIN7 | 49.0 | 300 | 100 | 5 | 5 | 301 | 1 | 250 | 1.8e-71 | 271.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene034421.t1 | G7IHH0 | 97.1 | 381 | 11 | 0 | 1 | 381 | 1 | 381 | 1.2e-198 | 701.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene034421.t1 | TF | NAC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene034421 | MS.gene68925 | PPI |
MS.gene034421 | MS.gene067785 | PPI |
MS.gene034421 | MS.gene41704 | PPI |
MS.gene034421 | MS.gene66962 | PPI |
MS.gene034421 | MS.gene87989 | PPI |
MS.gene034421 | MS.gene51894 | PPI |
MS.gene034421 | MS.gene51935 | PPI |
MS.gene034421 | MS.gene042585 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene034421.t1 | MTR_2g086880 | 97.375 | 381 | 10 | 0 | 1 | 381 | 1 | 381 | 0.0 | 787 |
MS.gene034421.t1 | MTR_2g086880 | 97.375 | 381 | 10 | 0 | 1 | 381 | 1 | 381 | 0.0 | 784 |
MS.gene034421.t1 | MTR_3g093040 | 49.718 | 177 | 78 | 4 | 11 | 178 | 101 | 275 | 3.92e-53 | 179 |
MS.gene034421.t1 | MTR_3g093050 | 51.744 | 172 | 73 | 4 | 1 | 162 | 4 | 175 | 9.52e-53 | 184 |
MS.gene034421.t1 | MTR_5g076850 | 51.829 | 164 | 71 | 3 | 13 | 168 | 1 | 164 | 9.98e-53 | 185 |
MS.gene034421.t1 | MTR_5g069030 | 54.140 | 157 | 63 | 3 | 10 | 157 | 16 | 172 | 1.81e-52 | 184 |
MS.gene034421.t1 | MTR_3g093050 | 51.744 | 172 | 73 | 4 | 1 | 162 | 4 | 175 | 2.23e-52 | 184 |
MS.gene034421.t1 | MTR_2g064090 | 51.899 | 158 | 67 | 2 | 13 | 161 | 1 | 158 | 8.96e-52 | 176 |
MS.gene034421.t1 | MTR_3g064580 | 49.438 | 178 | 73 | 4 | 13 | 173 | 1 | 178 | 8.32e-51 | 181 |
MS.gene034421.t1 | MTR_4g098630 | 45.098 | 204 | 93 | 6 | 13 | 202 | 1 | 199 | 4.38e-50 | 171 |
MS.gene034421.t1 | MTR_5g014300 | 46.524 | 187 | 76 | 4 | 13 | 175 | 1 | 187 | 5.04e-50 | 171 |
MS.gene034421.t1 | MTR_6g477900 | 46.512 | 172 | 79 | 3 | 13 | 176 | 1 | 167 | 1.17e-49 | 167 |
MS.gene034421.t1 | MTR_3g096140 | 48.649 | 148 | 68 | 2 | 18 | 157 | 7 | 154 | 2.97e-48 | 165 |
MS.gene034421.t1 | MTR_1g097300 | 56.028 | 141 | 58 | 2 | 17 | 156 | 18 | 155 | 1.87e-47 | 170 |
MS.gene034421.t1 | MTR_3g096140 | 48.649 | 148 | 68 | 2 | 18 | 157 | 7 | 154 | 3.76e-47 | 164 |
MS.gene034421.t1 | MTR_2g079990 | 42.541 | 181 | 96 | 2 | 3 | 176 | 1 | 180 | 4.61e-47 | 164 |
MS.gene034421.t1 | MTR_4g035590 | 48.765 | 162 | 76 | 3 | 11 | 165 | 1 | 162 | 6.11e-46 | 161 |
MS.gene034421.t1 | MTR_2g079990 | 47.945 | 146 | 75 | 1 | 3 | 148 | 1 | 145 | 1.67e-45 | 160 |
MS.gene034421.t1 | MTR_4g081870 | 48.428 | 159 | 70 | 2 | 12 | 159 | 3 | 160 | 1.81e-45 | 157 |
MS.gene034421.t1 | MTR_8g063550 | 46.405 | 153 | 74 | 2 | 13 | 157 | 1 | 153 | 2.82e-45 | 159 |
MS.gene034421.t1 | MTR_7g085220 | 40.000 | 205 | 99 | 6 | 11 | 194 | 1 | 202 | 7.89e-45 | 158 |
MS.gene034421.t1 | MTR_8g063550 | 46.405 | 153 | 74 | 2 | 13 | 157 | 1 | 153 | 9.24e-45 | 160 |
MS.gene034421.t1 | MTR_4g108760 | 41.026 | 195 | 94 | 4 | 20 | 195 | 19 | 211 | 1.51e-44 | 157 |
MS.gene034421.t1 | MTR_8g059170 | 46.541 | 159 | 74 | 3 | 13 | 161 | 9 | 166 | 1.77e-44 | 156 |
MS.gene034421.t1 | MTR_8g063550 | 46.405 | 153 | 74 | 2 | 13 | 157 | 1 | 153 | 2.82e-44 | 159 |
MS.gene034421.t1 | MTR_2g080010 | 49.635 | 137 | 66 | 2 | 17 | 151 | 14 | 149 | 5.11e-44 | 156 |
MS.gene034421.t1 | MTR_8g076110 | 39.691 | 194 | 100 | 6 | 13 | 195 | 1 | 188 | 5.58e-44 | 155 |
MS.gene034421.t1 | MTR_3g435150 | 43.333 | 180 | 82 | 3 | 20 | 180 | 18 | 196 | 6.34e-44 | 154 |
MS.gene034421.t1 | MTR_6g084430 | 48.951 | 143 | 67 | 2 | 20 | 157 | 7 | 148 | 6.37e-44 | 155 |
MS.gene034421.t1 | MTR_5g041940 | 43.017 | 179 | 89 | 3 | 20 | 186 | 5 | 182 | 1.31e-43 | 152 |
MS.gene034421.t1 | MTR_4g036030 | 48.966 | 145 | 67 | 3 | 20 | 157 | 9 | 153 | 1.62e-43 | 154 |
MS.gene034421.t1 | MTR_2g062730 | 50.658 | 152 | 65 | 4 | 20 | 161 | 12 | 163 | 1.93e-43 | 154 |
MS.gene034421.t1 | MTR_3g109340 | 41.899 | 179 | 92 | 4 | 17 | 184 | 21 | 198 | 3.78e-43 | 154 |
MS.gene034421.t1 | MTR_3g070030 | 45.604 | 182 | 82 | 7 | 19 | 185 | 19 | 198 | 4.04e-43 | 154 |
MS.gene034421.t1 | MTR_3g109340 | 41.667 | 180 | 92 | 4 | 17 | 184 | 21 | 199 | 4.92e-43 | 154 |
MS.gene034421.t1 | MTR_2157s0010 | 51.799 | 139 | 63 | 2 | 11 | 146 | 1 | 138 | 6.33e-43 | 150 |
MS.gene034421.t1 | MTR_3g088110 | 48.649 | 148 | 64 | 4 | 20 | 157 | 9 | 154 | 1.44e-42 | 150 |
MS.gene034421.t1 | MTR_8g093580 | 44.444 | 153 | 77 | 2 | 13 | 157 | 1 | 153 | 1.45e-42 | 155 |
MS.gene034421.t1 | MTR_5g021710 | 40.415 | 193 | 92 | 5 | 11 | 180 | 1 | 193 | 3.00e-42 | 151 |
MS.gene034421.t1 | MTR_4g101680 | 47.586 | 145 | 69 | 2 | 20 | 157 | 9 | 153 | 3.11e-42 | 151 |
MS.gene034421.t1 | MTR_3g096920 | 50.000 | 148 | 62 | 4 | 20 | 157 | 9 | 154 | 3.82e-42 | 149 |
MS.gene034421.t1 | MTR_2g078700 | 49.677 | 155 | 64 | 4 | 20 | 161 | 25 | 178 | 4.90e-42 | 151 |
MS.gene034421.t1 | MTR_8g023840 | 37.956 | 274 | 142 | 10 | 21 | 279 | 14 | 274 | 5.74e-42 | 152 |
MS.gene034421.t1 | MTR_1g090723 | 47.945 | 146 | 68 | 3 | 20 | 157 | 10 | 155 | 9.52e-42 | 155 |
MS.gene034421.t1 | MTR_1g090723 | 47.945 | 146 | 68 | 3 | 20 | 157 | 10 | 155 | 9.60e-42 | 154 |
MS.gene034421.t1 | MTR_1g090723 | 47.619 | 147 | 68 | 3 | 20 | 157 | 10 | 156 | 1.26e-41 | 155 |
MS.gene034421.t1 | MTR_7g011120 | 52.459 | 122 | 57 | 1 | 21 | 142 | 11 | 131 | 1.85e-41 | 148 |
MS.gene034421.t1 | MTR_3g096920 | 50.336 | 149 | 67 | 4 | 20 | 163 | 9 | 155 | 2.48e-41 | 148 |
MS.gene034421.t1 | MTR_7g100990 | 45.752 | 153 | 69 | 3 | 20 | 159 | 13 | 164 | 2.80e-41 | 148 |
MS.gene034421.t1 | MTR_1g008740 | 46.199 | 171 | 76 | 6 | 4 | 159 | 7 | 176 | 3.04e-41 | 149 |
MS.gene034421.t1 | MTR_1g096430 | 47.917 | 144 | 68 | 3 | 20 | 156 | 9 | 152 | 3.28e-41 | 148 |
MS.gene034421.t1 | MTR_1g008740 | 48.026 | 152 | 69 | 4 | 17 | 159 | 12 | 162 | 3.39e-41 | 148 |
MS.gene034421.t1 | MTR_8g094580 | 36.694 | 248 | 136 | 8 | 14 | 242 | 3 | 248 | 5.25e-41 | 146 |
MS.gene034421.t1 | MTR_2g093810 | 44.785 | 163 | 75 | 4 | 20 | 169 | 16 | 176 | 6.73e-41 | 147 |
MS.gene034421.t1 | MTR_1g090720 | 54.688 | 128 | 57 | 1 | 16 | 142 | 40 | 167 | 6.77e-41 | 150 |
MS.gene034421.t1 | MTR_0036s0150 | 47.260 | 146 | 69 | 3 | 20 | 157 | 7 | 152 | 8.99e-41 | 151 |
MS.gene034421.t1 | MTR_7g011130 | 52.459 | 122 | 57 | 1 | 21 | 142 | 22 | 142 | 1.46e-40 | 147 |
MS.gene034421.t1 | MTR_4g089135 | 50.400 | 125 | 59 | 2 | 20 | 142 | 17 | 140 | 1.70e-40 | 146 |
MS.gene034421.t1 | MTR_8g023860 | 47.436 | 156 | 67 | 6 | 16 | 157 | 2 | 156 | 2.82e-40 | 147 |
MS.gene034421.t1 | MTR_8g024480 | 47.552 | 143 | 70 | 2 | 11 | 148 | 5 | 147 | 6.56e-40 | 147 |
MS.gene034421.t1 | MTR_6g012670 | 51.969 | 127 | 60 | 1 | 20 | 146 | 22 | 147 | 1.49e-39 | 143 |
MS.gene034421.t1 | MTR_7g085260 | 41.989 | 181 | 87 | 5 | 3 | 169 | 5 | 181 | 1.54e-39 | 145 |
MS.gene034421.t1 | MTR_8g023900 | 49.342 | 152 | 68 | 5 | 21 | 164 | 15 | 165 | 2.16e-39 | 146 |
MS.gene034421.t1 | MTR_8g023900 | 46.626 | 163 | 80 | 6 | 6 | 162 | 181 | 342 | 2.33e-38 | 143 |
MS.gene034421.t1 | MTR_4g134460 | 50.794 | 126 | 60 | 2 | 18 | 142 | 54 | 178 | 2.29e-39 | 145 |
MS.gene034421.t1 | MTR_6g032770 | 44.937 | 158 | 74 | 5 | 3 | 157 | 7 | 154 | 1.20e-38 | 142 |
MS.gene034421.t1 | MTR_5g012080 | 50.794 | 126 | 59 | 2 | 20 | 142 | 9 | 134 | 1.68e-38 | 141 |
MS.gene034421.t1 | MTR_6g011860 | 42.857 | 161 | 74 | 5 | 18 | 161 | 15 | 174 | 3.27e-38 | 141 |
MS.gene034421.t1 | MTR_3g096140 | 46.212 | 132 | 63 | 2 | 34 | 157 | 2 | 133 | 3.91e-38 | 140 |
MS.gene034421.t1 | MTR_7g005280 | 46.897 | 145 | 66 | 4 | 20 | 157 | 17 | 157 | 5.15e-38 | 137 |
MS.gene034421.t1 | MTR_8g467490 | 48.031 | 127 | 63 | 2 | 18 | 142 | 14 | 139 | 9.06e-38 | 140 |
MS.gene034421.t1 | MTR_8g023930 | 47.973 | 148 | 70 | 6 | 21 | 162 | 27 | 173 | 1.41e-37 | 141 |
MS.gene034421.t1 | MTR_5g040420 | 40.230 | 174 | 82 | 5 | 18 | 174 | 14 | 182 | 2.98e-37 | 139 |
MS.gene034421.t1 | MTR_3g116070 | 47.020 | 151 | 74 | 4 | 20 | 165 | 25 | 174 | 3.91e-37 | 137 |
MS.gene034421.t1 | MTR_2g068880 | 45.312 | 128 | 66 | 1 | 19 | 142 | 23 | 150 | 6.58e-37 | 136 |
MS.gene034421.t1 | MTR_2g068920 | 45.312 | 128 | 66 | 1 | 19 | 142 | 22 | 149 | 7.90e-37 | 135 |
MS.gene034421.t1 | MTR_2g064470 | 42.675 | 157 | 79 | 4 | 9 | 157 | 2 | 155 | 1.05e-36 | 135 |
MS.gene034421.t1 | MTR_3g070040 | 49.587 | 121 | 57 | 1 | 22 | 142 | 12 | 128 | 1.44e-35 | 133 |
MS.gene034421.t1 | MTR_4g075980 | 41.096 | 146 | 80 | 3 | 19 | 159 | 16 | 160 | 1.34e-34 | 129 |
MS.gene034421.t1 | MTR_7g097090 | 45.270 | 148 | 75 | 4 | 15 | 157 | 7 | 153 | 1.46e-34 | 129 |
MS.gene034421.t1 | MTR_1g069805 | 43.624 | 149 | 78 | 4 | 14 | 157 | 6 | 153 | 5.32e-34 | 127 |
MS.gene034421.t1 | MTR_2g086690 | 48.062 | 129 | 61 | 4 | 20 | 142 | 6 | 134 | 8.83e-34 | 126 |
MS.gene034421.t1 | MTR_8g099750 | 45.038 | 131 | 67 | 2 | 14 | 142 | 10 | 137 | 1.59e-33 | 125 |
MS.gene034421.t1 | MTR_5g090970 | 44.531 | 128 | 67 | 2 | 18 | 142 | 18 | 144 | 5.01e-33 | 125 |
MS.gene034421.t1 | MTR_7g105170 | 47.727 | 132 | 63 | 3 | 17 | 142 | 3 | 134 | 6.13e-33 | 124 |
MS.gene034421.t1 | MTR_5g090970 | 43.750 | 128 | 67 | 2 | 18 | 142 | 18 | 143 | 1.70e-32 | 124 |
MS.gene034421.t1 | MTR_4g052620 | 48.438 | 128 | 61 | 4 | 20 | 142 | 7 | 134 | 5.01e-32 | 122 |
MS.gene034421.t1 | MTR_8g023880 | 39.326 | 178 | 87 | 6 | 14 | 173 | 3 | 177 | 4.60e-31 | 119 |
MS.gene034421.t1 | MTR_3g098810 | 39.850 | 133 | 73 | 2 | 14 | 142 | 10 | 139 | 4.76e-30 | 114 |
MS.gene034421.t1 | MTR_3g098810 | 39.850 | 133 | 73 | 2 | 14 | 142 | 10 | 139 | 1.83e-29 | 114 |
MS.gene034421.t1 | MTR_8g094580 | 35.233 | 193 | 105 | 7 | 69 | 242 | 3 | 194 | 1.26e-24 | 101 |
MS.gene034421.t1 | MTR_4g094302 | 37.600 | 125 | 67 | 3 | 20 | 142 | 13 | 128 | 2.52e-23 | 95.5 |
MS.gene034421.t1 | MTR_4g094302 | 33.544 | 158 | 81 | 4 | 20 | 162 | 13 | 161 | 2.68e-23 | 96.3 |
MS.gene034421.t1 | MTR_8g093790 | 36.111 | 144 | 66 | 8 | 20 | 157 | 12 | 135 | 1.66e-17 | 80.1 |
MS.gene034421.t1 | MTR_7g070140 | 47.945 | 73 | 36 | 1 | 72 | 142 | 17 | 89 | 1.67e-17 | 79.0 |
MS.gene034421.t1 | MTR_7g083360 | 33.333 | 126 | 79 | 5 | 21 | 144 | 13 | 135 | 2.97e-14 | 70.1 |
MS.gene034421.t1 | MTR_3g096400 | 31.496 | 127 | 78 | 3 | 20 | 144 | 9 | 128 | 3.09e-14 | 71.6 |
MS.gene034421.t1 | MTR_7g083330 | 32.540 | 126 | 80 | 5 | 21 | 144 | 21 | 143 | 2.71e-13 | 68.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene034421.t1 | AT2G27300 | 48.148 | 297 | 107 | 4 | 5 | 301 | 1 | 250 | 1.37e-91 | 278 |
MS.gene034421.t1 | AT3G44290 | 50.362 | 276 | 100 | 6 | 14 | 289 | 10 | 248 | 6.17e-84 | 259 |
MS.gene034421.t1 | AT5G22290 | 45.110 | 317 | 117 | 8 | 5 | 315 | 8 | 273 | 4.52e-82 | 254 |
MS.gene034421.t1 | AT3G44290 | 70.199 | 151 | 45 | 0 | 14 | 164 | 10 | 160 | 5.92e-79 | 242 |
MS.gene034421.t1 | AT4G35580 | 55.152 | 165 | 66 | 2 | 12 | 168 | 3 | 167 | 6.42e-57 | 194 |
MS.gene034421.t1 | AT4G35580 | 55.152 | 165 | 66 | 2 | 12 | 168 | 3 | 167 | 7.69e-57 | 194 |
MS.gene034421.t1 | AT4G35580 | 55.152 | 165 | 66 | 2 | 12 | 168 | 3 | 167 | 8.03e-57 | 194 |
MS.gene034421.t1 | AT1G65910 | 43.515 | 239 | 115 | 4 | 13 | 243 | 1 | 227 | 5.36e-56 | 194 |
MS.gene034421.t1 | AT1G33060 | 54.938 | 162 | 63 | 3 | 4 | 157 | 12 | 171 | 1.55e-55 | 193 |
MS.gene034421.t1 | AT1G33060 | 54.938 | 162 | 63 | 3 | 4 | 157 | 12 | 171 | 1.88e-55 | 193 |
MS.gene034421.t1 | AT5G24590 | 50.838 | 179 | 74 | 4 | 7 | 176 | 2 | 175 | 4.94e-55 | 187 |
MS.gene034421.t1 | AT3G49530 | 52.469 | 162 | 64 | 4 | 13 | 163 | 8 | 167 | 3.85e-54 | 184 |
MS.gene034421.t1 | AT3G49530 | 52.469 | 162 | 64 | 4 | 13 | 163 | 8 | 167 | 1.48e-53 | 184 |
MS.gene034421.t1 | AT5G17260 | 55.844 | 154 | 59 | 2 | 13 | 157 | 1 | 154 | 6.65e-53 | 182 |
MS.gene034421.t1 | AT3G17730 | 53.503 | 157 | 64 | 3 | 13 | 160 | 1 | 157 | 1.84e-52 | 175 |
MS.gene034421.t1 | AT3G03200 | 55.195 | 154 | 60 | 2 | 13 | 157 | 1 | 154 | 5.53e-52 | 180 |
MS.gene034421.t1 | AT5G46590 | 47.126 | 174 | 82 | 4 | 13 | 176 | 1 | 174 | 5.92e-49 | 167 |
MS.gene034421.t1 | AT4G17980 | 49.383 | 162 | 70 | 4 | 13 | 162 | 1 | 162 | 2.44e-48 | 165 |
MS.gene034421.t1 | AT4G17980 | 49.383 | 162 | 70 | 4 | 13 | 162 | 1 | 162 | 4.21e-48 | 165 |
MS.gene034421.t1 | AT1G54330 | 51.592 | 157 | 70 | 3 | 13 | 163 | 1 | 157 | 5.57e-48 | 165 |
MS.gene034421.t1 | AT4G27410 | 47.436 | 156 | 74 | 2 | 13 | 161 | 9 | 163 | 3.27e-47 | 163 |
MS.gene034421.t1 | AT1G33280 | 47.429 | 175 | 84 | 4 | 11 | 177 | 1 | 175 | 6.08e-47 | 162 |
MS.gene034421.t1 | AT5G46590 | 50.318 | 157 | 73 | 4 | 13 | 164 | 1 | 157 | 6.49e-47 | 162 |
MS.gene034421.t1 | AT4G10350 | 47.222 | 180 | 79 | 4 | 20 | 188 | 11 | 185 | 9.11e-47 | 163 |
MS.gene034421.t1 | AT3G10500 | 50.658 | 152 | 67 | 2 | 14 | 157 | 5 | 156 | 1.81e-46 | 167 |
MS.gene034421.t1 | AT3G15500 | 47.403 | 154 | 73 | 2 | 13 | 159 | 9 | 161 | 3.73e-46 | 160 |
MS.gene034421.t1 | AT5G04410 | 50.658 | 152 | 67 | 2 | 14 | 157 | 5 | 156 | 6.49e-46 | 166 |
MS.gene034421.t1 | AT5G09330 | 49.673 | 153 | 69 | 2 | 13 | 157 | 1 | 153 | 7.06e-46 | 164 |
MS.gene034421.t1 | AT5G09330 | 49.673 | 153 | 69 | 2 | 13 | 157 | 1 | 153 | 7.06e-46 | 164 |
MS.gene034421.t1 | AT5G09330 | 49.673 | 153 | 69 | 2 | 13 | 157 | 1 | 153 | 7.06e-46 | 164 |
MS.gene034421.t1 | AT5G09330 | 49.673 | 153 | 69 | 2 | 13 | 157 | 1 | 153 | 7.06e-46 | 164 |
MS.gene034421.t1 | AT5G09330 | 49.673 | 153 | 69 | 2 | 13 | 157 | 1 | 153 | 7.06e-46 | 164 |
MS.gene034421.t1 | AT3G10480 | 48.052 | 154 | 72 | 2 | 12 | 157 | 21 | 174 | 1.75e-45 | 162 |
MS.gene034421.t1 | AT3G10480 | 47.742 | 155 | 72 | 2 | 12 | 157 | 21 | 175 | 2.14e-45 | 162 |
MS.gene034421.t1 | AT1G71930 | 42.188 | 192 | 89 | 4 | 12 | 181 | 3 | 194 | 2.78e-45 | 159 |
MS.gene034421.t1 | AT1G71930 | 42.188 | 192 | 89 | 4 | 12 | 181 | 3 | 194 | 2.78e-45 | 159 |
MS.gene034421.t1 | AT1G69490 | 49.351 | 154 | 72 | 2 | 14 | 167 | 5 | 152 | 2.78e-45 | 157 |
MS.gene034421.t1 | AT3G10490 | 47.712 | 153 | 71 | 2 | 14 | 157 | 23 | 175 | 3.51e-45 | 155 |
MS.gene034421.t1 | AT1G52890 | 47.333 | 150 | 71 | 2 | 17 | 159 | 13 | 161 | 1.98e-44 | 156 |
MS.gene034421.t1 | AT4G27410 | 44.186 | 172 | 73 | 3 | 13 | 161 | 9 | 180 | 2.55e-44 | 155 |
MS.gene034421.t1 | AT5G64060 | 41.714 | 175 | 89 | 3 | 13 | 179 | 1 | 170 | 3.18e-44 | 157 |
MS.gene034421.t1 | AT2G24430 | 48.701 | 154 | 70 | 3 | 17 | 162 | 15 | 167 | 4.88e-44 | 155 |
MS.gene034421.t1 | AT2G24430 | 48.701 | 154 | 70 | 3 | 17 | 162 | 15 | 167 | 4.88e-44 | 155 |
MS.gene034421.t1 | AT3G15170 | 50.327 | 153 | 64 | 3 | 16 | 157 | 18 | 169 | 7.42e-44 | 154 |
MS.gene034421.t1 | AT1G32510 | 45.503 | 189 | 80 | 6 | 13 | 178 | 1 | 189 | 1.17e-43 | 153 |
MS.gene034421.t1 | AT3G18400 | 48.611 | 144 | 67 | 2 | 20 | 157 | 7 | 149 | 1.31e-43 | 154 |
MS.gene034421.t1 | AT3G10490 | 47.712 | 153 | 71 | 2 | 14 | 157 | 23 | 175 | 1.32e-43 | 157 |
MS.gene034421.t1 | AT5G07680 | 48.344 | 151 | 68 | 2 | 20 | 161 | 5 | 154 | 2.16e-43 | 153 |
MS.gene034421.t1 | AT5G07680 | 48.344 | 151 | 68 | 2 | 20 | 161 | 19 | 168 | 2.62e-43 | 154 |
MS.gene034421.t1 | AT5G39610 | 41.579 | 190 | 95 | 5 | 20 | 200 | 22 | 204 | 5.72e-43 | 151 |
MS.gene034421.t1 | AT3G29035 | 56.098 | 123 | 53 | 1 | 20 | 142 | 26 | 147 | 7.38e-43 | 152 |
MS.gene034421.t1 | AT5G61430 | 45.625 | 160 | 72 | 3 | 7 | 157 | 10 | 163 | 8.00e-43 | 152 |
MS.gene034421.t1 | AT1G34190 | 50.725 | 138 | 64 | 2 | 20 | 156 | 18 | 152 | 1.17e-42 | 157 |
MS.gene034421.t1 | AT1G79580 | 46.591 | 176 | 77 | 6 | 1 | 164 | 1 | 171 | 1.35e-42 | 152 |
MS.gene034421.t1 | AT1G79580 | 46.591 | 176 | 77 | 6 | 1 | 164 | 1 | 171 | 1.35e-42 | 152 |
MS.gene034421.t1 | AT1G79580 | 46.591 | 176 | 77 | 6 | 1 | 164 | 1 | 171 | 1.35e-42 | 152 |
MS.gene034421.t1 | AT1G79580 | 46.591 | 176 | 77 | 6 | 1 | 164 | 1 | 171 | 1.35e-42 | 152 |
MS.gene034421.t1 | AT1G79580 | 46.591 | 176 | 77 | 6 | 1 | 164 | 1 | 171 | 1.35e-42 | 152 |
MS.gene034421.t1 | AT3G04070 | 46.667 | 165 | 68 | 5 | 16 | 161 | 8 | 171 | 1.67e-42 | 152 |
MS.gene034421.t1 | AT1G61110 | 51.562 | 128 | 60 | 2 | 20 | 146 | 18 | 144 | 4.05e-42 | 150 |
MS.gene034421.t1 | AT4G36160 | 48.299 | 147 | 69 | 3 | 17 | 156 | 13 | 159 | 4.30e-42 | 152 |
MS.gene034421.t1 | AT4G36160 | 48.299 | 147 | 69 | 3 | 17 | 156 | 9 | 155 | 4.39e-42 | 151 |
MS.gene034421.t1 | AT4G36160 | 48.299 | 147 | 69 | 3 | 17 | 156 | 9 | 155 | 4.39e-42 | 151 |
MS.gene034421.t1 | AT3G04070 | 52.206 | 136 | 59 | 3 | 16 | 146 | 8 | 142 | 5.87e-42 | 150 |
MS.gene034421.t1 | AT1G34180 | 52.344 | 128 | 60 | 1 | 20 | 146 | 18 | 145 | 6.76e-42 | 152 |
MS.gene034421.t1 | AT2G18060 | 45.695 | 151 | 75 | 3 | 13 | 156 | 4 | 154 | 7.42e-42 | 150 |
MS.gene034421.t1 | AT2G18060 | 45.695 | 151 | 75 | 3 | 13 | 156 | 4 | 154 | 7.42e-42 | 150 |
MS.gene034421.t1 | AT2G02450 | 53.175 | 126 | 57 | 2 | 18 | 142 | 51 | 175 | 8.02e-42 | 151 |
MS.gene034421.t1 | AT2G02450 | 53.175 | 126 | 57 | 2 | 18 | 142 | 51 | 175 | 1.05e-41 | 151 |
MS.gene034421.t1 | AT1G01720 | 47.651 | 149 | 65 | 4 | 20 | 157 | 9 | 155 | 1.53e-41 | 148 |
MS.gene034421.t1 | AT1G34180 | 52.344 | 128 | 60 | 1 | 20 | 146 | 18 | 145 | 2.28e-41 | 153 |
MS.gene034421.t1 | AT2G46770 | 45.513 | 156 | 80 | 3 | 4 | 154 | 1 | 156 | 2.31e-41 | 149 |
MS.gene034421.t1 | AT5G66300 | 47.742 | 155 | 71 | 4 | 17 | 161 | 11 | 165 | 2.65e-41 | 147 |
MS.gene034421.t1 | AT5G08790 | 39.706 | 204 | 105 | 6 | 21 | 210 | 10 | 209 | 5.45e-41 | 146 |
MS.gene034421.t1 | AT5G53950 | 50.649 | 154 | 62 | 5 | 20 | 161 | 19 | 170 | 1.53e-40 | 147 |
MS.gene034421.t1 | AT2G33480 | 48.252 | 143 | 65 | 2 | 20 | 157 | 17 | 155 | 1.67e-40 | 144 |
MS.gene034421.t1 | AT2G33480 | 47.586 | 145 | 65 | 2 | 20 | 157 | 17 | 157 | 3.45e-40 | 144 |
MS.gene034421.t1 | AT3G61910 | 36.232 | 207 | 103 | 3 | 1 | 185 | 1 | 200 | 7.38e-40 | 144 |
MS.gene034421.t1 | AT2G17040 | 46.575 | 146 | 72 | 3 | 19 | 159 | 7 | 151 | 9.48e-40 | 142 |
MS.gene034421.t1 | AT3G15510 | 43.293 | 164 | 71 | 4 | 22 | 164 | 21 | 183 | 1.05e-39 | 145 |
MS.gene034421.t1 | AT1G77450 | 47.297 | 148 | 66 | 4 | 20 | 157 | 12 | 157 | 1.11e-39 | 142 |
MS.gene034421.t1 | AT1G12260 | 44.828 | 145 | 73 | 3 | 20 | 157 | 9 | 153 | 1.64e-39 | 144 |
MS.gene034421.t1 | AT1G32770 | 46.575 | 146 | 75 | 2 | 4 | 146 | 1 | 146 | 1.66e-39 | 144 |
MS.gene034421.t1 | AT3G10480 | 39.894 | 188 | 71 | 3 | 12 | 157 | 21 | 208 | 1.99e-39 | 147 |
MS.gene034421.t1 | AT1G12260 | 44.828 | 145 | 73 | 3 | 20 | 157 | 9 | 153 | 3.35e-39 | 144 |
MS.gene034421.t1 | AT5G18270 | 42.353 | 170 | 84 | 4 | 1 | 157 | 1 | 169 | 3.79e-39 | 142 |
MS.gene034421.t1 | AT1G76420 | 45.402 | 174 | 86 | 4 | 1 | 166 | 5 | 177 | 5.62e-39 | 142 |
MS.gene034421.t1 | AT1G26870 | 48.819 | 127 | 62 | 2 | 18 | 142 | 16 | 141 | 8.55e-39 | 144 |
MS.gene034421.t1 | AT1G34180 | 47.857 | 140 | 60 | 2 | 20 | 146 | 18 | 157 | 9.54e-39 | 144 |
MS.gene034421.t1 | AT5G18270 | 41.765 | 170 | 85 | 4 | 1 | 157 | 1 | 169 | 1.57e-38 | 141 |
MS.gene034421.t1 | AT1G62700 | 44.966 | 149 | 75 | 3 | 16 | 157 | 5 | 153 | 2.10e-38 | 142 |
MS.gene034421.t1 | AT1G62700 | 44.966 | 149 | 75 | 3 | 16 | 157 | 5 | 153 | 2.10e-38 | 142 |
MS.gene034421.t1 | AT1G34180 | 47.857 | 140 | 60 | 2 | 20 | 146 | 18 | 157 | 2.69e-38 | 145 |
MS.gene034421.t1 | AT3G04060 | 43.030 | 165 | 81 | 4 | 3 | 157 | 7 | 168 | 2.97e-38 | 140 |
MS.gene034421.t1 | AT5G63790 | 43.210 | 162 | 73 | 5 | 8 | 157 | 45 | 199 | 6.05e-38 | 139 |
MS.gene034421.t1 | AT5G62380 | 44.444 | 144 | 73 | 3 | 20 | 156 | 9 | 152 | 6.43e-38 | 140 |
MS.gene034421.t1 | AT5G62380 | 44.444 | 144 | 73 | 3 | 20 | 156 | 9 | 152 | 6.43e-38 | 140 |
MS.gene034421.t1 | AT5G63790 | 43.210 | 162 | 73 | 5 | 8 | 157 | 55 | 209 | 7.05e-38 | 139 |
MS.gene034421.t1 | AT5G04395 | 44.966 | 149 | 67 | 2 | 12 | 145 | 22 | 170 | 8.16e-38 | 135 |
MS.gene034421.t1 | AT1G32870 | 48.630 | 146 | 69 | 3 | 3 | 144 | 28 | 171 | 1.05e-37 | 143 |
MS.gene034421.t1 | AT1G52880 | 47.333 | 150 | 73 | 3 | 22 | 167 | 21 | 168 | 1.16e-37 | 138 |
MS.gene034421.t1 | AT2G43000 | 47.581 | 124 | 64 | 1 | 19 | 142 | 19 | 141 | 1.42e-37 | 137 |
MS.gene034421.t1 | AT1G32870 | 51.111 | 135 | 63 | 2 | 11 | 144 | 3 | 135 | 1.49e-37 | 142 |
MS.gene034421.t1 | AT1G32870 | 51.111 | 135 | 63 | 2 | 11 | 144 | 3 | 135 | 1.75e-37 | 142 |
MS.gene034421.t1 | AT3G12977 | 36.757 | 185 | 106 | 4 | 1 | 175 | 1 | 184 | 2.81e-37 | 136 |
MS.gene034421.t1 | AT5G13180 | 49.600 | 125 | 57 | 2 | 20 | 142 | 16 | 136 | 8.14e-37 | 134 |
MS.gene034421.t1 | AT1G56010 | 40.476 | 168 | 87 | 5 | 7 | 162 | 8 | 174 | 1.46e-36 | 135 |
MS.gene034421.t1 | AT5G39820 | 47.244 | 127 | 64 | 2 | 18 | 142 | 20 | 145 | 3.66e-36 | 135 |
MS.gene034421.t1 | AT5G22290 | 38.839 | 224 | 80 | 8 | 98 | 315 | 2 | 174 | 4.14e-34 | 127 |
MS.gene034421.t1 | AT1G02230 | 41.520 | 171 | 86 | 7 | 21 | 182 | 6 | 171 | 5.54e-34 | 129 |
MS.gene034421.t1 | AT3G12910 | 48.837 | 129 | 59 | 4 | 19 | 142 | 22 | 148 | 5.91e-33 | 125 |
MS.gene034421.t1 | AT4G01540 | 41.765 | 170 | 89 | 7 | 21 | 182 | 7 | 174 | 5.34e-30 | 119 |
MS.gene034421.t1 | AT4G01520 | 40.588 | 170 | 91 | 7 | 21 | 182 | 7 | 174 | 6.55e-30 | 117 |
MS.gene034421.t1 | AT4G01540 | 41.765 | 170 | 89 | 7 | 21 | 182 | 7 | 174 | 6.78e-30 | 119 |
MS.gene034421.t1 | AT4G01550 | 43.056 | 144 | 75 | 4 | 21 | 157 | 7 | 150 | 9.87e-30 | 119 |
MS.gene034421.t1 | AT4G01540 | 41.765 | 170 | 89 | 7 | 21 | 182 | 7 | 174 | 1.46e-29 | 119 |
MS.gene034421.t1 | AT4G01540 | 41.765 | 170 | 89 | 7 | 21 | 182 | 7 | 174 | 1.49e-29 | 118 |
MS.gene034421.t1 | AT5G22380 | 40.000 | 145 | 81 | 3 | 21 | 159 | 8 | 152 | 6.82e-29 | 112 |
MS.gene034421.t1 | AT4G28530 | 39.024 | 164 | 78 | 4 | 15 | 157 | 7 | 169 | 7.94e-29 | 115 |
MS.gene034421.t1 | AT4G10350 | 44.800 | 125 | 55 | 3 | 73 | 188 | 19 | 138 | 2.67e-27 | 110 |
MS.gene034421.t1 | AT3G04420 | 41.600 | 125 | 70 | 2 | 21 | 142 | 6 | 130 | 4.30e-26 | 106 |
MS.gene034421.t1 | AT3G04420 | 41.600 | 125 | 70 | 2 | 21 | 142 | 6 | 130 | 6.64e-26 | 107 |
MS.gene034421.t1 | AT1G02250 | 38.596 | 171 | 90 | 8 | 21 | 182 | 6 | 170 | 7.92e-26 | 107 |
MS.gene034421.t1 | AT3G44350 | 44.094 | 127 | 66 | 4 | 21 | 142 | 8 | 134 | 1.10e-25 | 102 |
MS.gene034421.t1 | AT5G61430 | 45.263 | 95 | 43 | 1 | 72 | 157 | 6 | 100 | 2.94e-25 | 103 |
MS.gene034421.t1 | AT3G44350 | 44.094 | 127 | 66 | 4 | 21 | 142 | 8 | 134 | 3.89e-25 | 102 |
MS.gene034421.t1 | AT3G12977 | 45.652 | 92 | 42 | 2 | 74 | 157 | 20 | 111 | 1.21e-23 | 98.2 |
MS.gene034421.t1 | AT1G02220 | 38.400 | 125 | 71 | 3 | 21 | 142 | 6 | 127 | 1.13e-22 | 99.0 |
MS.gene034421.t1 | AT1G01010 | 38.150 | 173 | 85 | 9 | 21 | 179 | 6 | 170 | 2.09e-22 | 98.6 |
MS.gene034421.t1 | AT2G33480 | 46.237 | 93 | 43 | 1 | 72 | 157 | 8 | 100 | 6.27e-22 | 93.2 |
MS.gene034421.t1 | AT1G56010 | 44.000 | 100 | 45 | 3 | 74 | 162 | 8 | 107 | 4.45e-21 | 92.0 |
MS.gene034421.t1 | AT5G64530 | 37.209 | 129 | 66 | 5 | 20 | 146 | 5 | 120 | 2.77e-20 | 87.0 |
MS.gene034421.t1 | AT5G64530 | 37.209 | 129 | 66 | 5 | 20 | 146 | 5 | 120 | 1.49e-19 | 85.9 |
MS.gene034421.t1 | AT4G28530 | 40.179 | 112 | 48 | 3 | 15 | 109 | 7 | 116 | 2.29e-17 | 82.4 |
MS.gene034421.t1 | AT3G55210 | 31.333 | 150 | 90 | 2 | 12 | 148 | 5 | 154 | 5.02e-17 | 80.9 |
MS.gene034421.t1 | AT3G04430 | 33.566 | 143 | 82 | 4 | 24 | 154 | 6 | 147 | 5.72e-17 | 79.0 |
MS.gene034421.t1 | AT3G56530 | 32.000 | 125 | 83 | 1 | 20 | 142 | 54 | 178 | 4.09e-16 | 79.0 |
MS.gene034421.t1 | AT3G10490 | 47.945 | 73 | 30 | 1 | 93 | 157 | 3 | 75 | 1.00e-15 | 78.2 |
MS.gene034421.t1 | AT3G10490 | 47.945 | 73 | 30 | 1 | 93 | 157 | 3 | 75 | 1.00e-15 | 78.2 |
MS.gene034421.t1 | AT2G43000 | 48.387 | 62 | 32 | 0 | 81 | 142 | 2 | 63 | 5.21e-14 | 70.5 |
MS.gene034421.t1 | AT2G18060 | 44.615 | 65 | 31 | 2 | 97 | 156 | 2 | 66 | 1.12e-12 | 68.2 |
MS.gene034421.t1 | AT5G50820 | 32.283 | 127 | 73 | 4 | 20 | 142 | 19 | 136 | 1.79e-12 | 66.2 |
MS.gene034421.t1 | AT5G14000 | 29.655 | 145 | 90 | 3 | 3 | 145 | 7 | 141 | 4.43e-12 | 63.9 |
MS.gene034421.t1 | AT5G14000 | 26.500 | 200 | 129 | 5 | 8 | 199 | 4 | 193 | 1.21e-11 | 63.9 |
Find 0 sgRNAs with CRISPR-Local
Find 156 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TGTTTTTAGTTTTAAATATT+TGG | - | 15252:7995-8014 | MS.gene034421:CDS | 10.0% |
!! | TTATTACCTTAGAAAAAAAT+TGG | - | 15252:7869-7888 | MS.gene034421:CDS | 15.0% |
!! | AAACAAGTTAGAAATATTGT+AGG | - | 15252:9959-9978 | MS.gene034421:CDS | 20.0% |
!! | AAATATTGTAGGAAAATTTC+AGG | - | 15252:9970-9989 | MS.gene034421:CDS | 20.0% |
!! | AACATTTCTCAAATTATTAC+CGG | + | 15252:8654-8673 | MS.gene034421:intergenic | 20.0% |
!! | CATAACAATATCATCATAAA+AGG | + | 15252:9621-9640 | MS.gene034421:intergenic | 20.0% |
!!! | ATACTTGGAATAGTTTTTTT+TGG | - | 15252:8075-8094 | MS.gene034421:CDS | 20.0% |
!!! | ATAGTTTTTTTTGGCATATT+TGG | - | 15252:8084-8103 | MS.gene034421:CDS | 20.0% |
!!! | ATATTATTTTGGTCTTCATT+TGG | - | 15252:9929-9948 | MS.gene034421:CDS | 20.0% |
!!! | CTTGTTTTTTAACATTCATA+GGG | + | 15252:9075-9094 | MS.gene034421:intergenic | 20.0% |
!!! | TCTTGTTTTTTAACATTCAT+AGG | + | 15252:9076-9095 | MS.gene034421:intergenic | 20.0% |
! | ATCTGATTGAATGAATGATT+TGG | + | 15252:8790-8809 | MS.gene034421:intergenic | 25.0% |
! | CATTGTATGAATTTCATGTA+GGG | - | 15252:8482-8501 | MS.gene034421:CDS | 25.0% |
! | TACCTTAGAAAAAAATTGGA+TGG | - | 15252:7873-7892 | MS.gene034421:CDS | 25.0% |
! | TGATGATATTGTTATGTAGA+TGG | - | 15252:9625-9644 | MS.gene034421:intron | 25.0% |
!! | AAATTTTCTGCTGAGTTAAT+TGG | + | 15252:8733-8752 | MS.gene034421:intergenic | 25.0% |
!! | ATAATAATGAGAGGCATAAA+TGG | + | 15252:8509-8528 | MS.gene034421:intergenic | 25.0% |
!! | ATCAATTTTATACCTTTAGC+TGG | + | 15252:9482-9501 | MS.gene034421:intergenic | 25.0% |
!!! | TGAGCATTGAAAATGTTATT+TGG | - | 15252:8344-8363 | MS.gene034421:CDS | 25.0% |
!!! | TTGTTTGTTATGTATGTTTC+AGG | - | 15252:9119-9138 | MS.gene034421:intron | 25.0% |
!!! | TTTTTTTTGGCATATTTGGA+AGG | - | 15252:8088-8107 | MS.gene034421:CDS | 25.0% |
AGCAAATATCATCAAACGAT+TGG | + | 15252:9885-9904 | MS.gene034421:intergenic | 30.0% | |
ATGTATGTTTCAGGATTCTT+TGG | - | 15252:9128-9147 | MS.gene034421:intron | 30.0% | |
ATTGTTATGCTGAGATACTA+AGG | - | 15252:9657-9676 | MS.gene034421:intron | 30.0% | |
CACTTTCATGTGAATTTACT+GGG | + | 15252:9272-9291 | MS.gene034421:intergenic | 30.0% | |
GCATTGTATGAATTTCATGT+AGG | - | 15252:8481-8500 | MS.gene034421:CDS | 30.0% | |
GCTTTGTAAATATGAACCTT+GGG | - | 15252:7932-7951 | MS.gene034421:CDS | 30.0% | |
TCACTTTCATGTGAATTTAC+TGG | + | 15252:9273-9292 | MS.gene034421:intergenic | 30.0% | |
! | ACATATGTGTAGGTTTTTCA+TGG | + | 15252:8541-8560 | MS.gene034421:intergenic | 30.0% |
! | AGCTTTGTAAATATGAACCT+TGG | - | 15252:7931-7950 | MS.gene034421:CDS | 30.0% |
! | ATATGTGTAGGTTTTTCATG+GGG | + | 15252:8539-8558 | MS.gene034421:intergenic | 30.0% |
! | ATTTGGATATTTTCTTCCAC+GGG | + | 15252:8835-8854 | MS.gene034421:intergenic | 30.0% |
! | CATATGTGTAGGTTTTTCAT+GGG | + | 15252:8540-8559 | MS.gene034421:intergenic | 30.0% |
! | CATTTGGATATTTTCTTCCA+CGG | + | 15252:8836-8855 | MS.gene034421:intergenic | 30.0% |
! | CTTTTACTTTGTGAACCATT+TGG | + | 15252:8852-8871 | MS.gene034421:intergenic | 30.0% |
! | TTTCTTCATTTTCACTCTCA+CGG | - | 15252:9904-9923 | MS.gene034421:CDS | 30.0% |
! | TTTTTAACATTCATAGGGAG+AGG | + | 15252:9070-9089 | MS.gene034421:intergenic | 30.0% |
!! | AAGTGTTCAAGTTATTTCTG+AGG | - | 15252:7905-7924 | MS.gene034421:CDS | 30.0% |
!! | CATCATTTTAATCACGCTTT+TGG | - | 15252:8193-8212 | MS.gene034421:intron | 30.0% |
!!! | GACCATCCAATTTTTTTCTA+AGG | + | 15252:7878-7897 | MS.gene034421:intergenic | 30.0% |
!!! | TTATTTTGGTCTTCATTTGG+TGG | - | 15252:9932-9951 | MS.gene034421:CDS | 30.0% |
ACAACGGAGAATACGATTAA+GGG | - | 15252:9775-9794 | MS.gene034421:intron | 35.0% | |
ACATTCAGATTATTACCCAC+CGG | + | 15252:9041-9060 | MS.gene034421:intergenic | 35.0% | |
ACCGAAAATATGTATGTTGG+TGG | - | 15252:8373-8392 | MS.gene034421:CDS | 35.0% | |
CAATGCAGTAATTAGATGCA+AGG | + | 15252:8467-8486 | MS.gene034421:intergenic | 35.0% | |
CACACCGAAAATATGTATGT+TGG | - | 15252:8370-8389 | MS.gene034421:CDS | 35.0% | |
CATATGTTGAAACTTAGCAC+AGG | + | 15252:8306-8325 | MS.gene034421:intergenic | 35.0% | |
CCGAAAATATGTATGTTGGT+GGG | - | 15252:8374-8393 | MS.gene034421:CDS | 35.0% | |
CGTGGAAGAAAATATCCAAA+TGG | - | 15252:8834-8853 | MS.gene034421:CDS | 35.0% | |
CGTGTAATGTACTCATTCTA+CGG | + | 15252:9535-9554 | MS.gene034421:intergenic | 35.0% | |
CTGTGATTATGACATATCCA+CGG | - | 15252:8270-8289 | MS.gene034421:intron | 35.0% | |
GAAATCAACTCTTCATCAGT+AGG | + | 15252:7849-7868 | MS.gene034421:intergenic | 35.0% | |
GATGAATCATCAATGTCTCA+AGG | - | 15252:9698-9717 | MS.gene034421:intron | 35.0% | |
GTGTGGGATTGTGAATTATT+GGG | - | 15252:8110-8129 | MS.gene034421:intron | 35.0% | |
TAGAAATAAGAATCATCCCC+AGG | + | 15252:8401-8420 | MS.gene034421:intergenic | 35.0% | |
TAGTGATAAGGAAACTACTC+AGG | + | 15252:8565-8584 | MS.gene034421:intergenic | 35.0% | |
TCACTTTCATGTGAATGTAC+AGG | + | 15252:9231-9250 | MS.gene034421:intergenic | 35.0% | |
TCATTCAATCAGATAACGAG+TGG | - | 15252:8796-8815 | MS.gene034421:CDS | 35.0% | |
TGAGAATGTGCAAGGTTATT+TGG | + | 15252:9737-9756 | MS.gene034421:intergenic | 35.0% | |
TGTTATGTAGATGGATGAAG+AGG | - | 15252:9634-9653 | MS.gene034421:intron | 35.0% | |
! | AAATCGGGTTCTAATGTCAT+AGG | - | 15252:8921-8940 | MS.gene034421:CDS | 35.0% |
! | ATTAGCTTAGCTGGAATTGT+TGG | - | 15252:8136-8155 | MS.gene034421:intron | 35.0% |
! | CAACATACATATTTTCGGTG+TGG | + | 15252:8372-8391 | MS.gene034421:intergenic | 35.0% |
! | CATTTTCAATGCTCAAAACG+TGG | + | 15252:8339-8358 | MS.gene034421:intergenic | 35.0% |
! | CCCACCAACATACATATTTT+CGG | + | 15252:8377-8396 | MS.gene034421:intergenic | 35.0% |
! | CTAGATTCAGCTTTTTGCAT+CGG | - | 15252:9567-9586 | MS.gene034421:intron | 35.0% |
! | CTCTCACGGCTATATTATTT+TGG | - | 15252:9918-9937 | MS.gene034421:CDS | 35.0% |
! | GATTGAATGAATGATTTGGC+TGG | + | 15252:8786-8805 | MS.gene034421:intergenic | 35.0% |
! | TAGGACAGAATCTAAAACCA+GGG | + | 15252:7830-7849 | MS.gene034421:intergenic | 35.0% |
! | TATGTGTAGGTTTTTCATGG+GGG | + | 15252:8538-8557 | MS.gene034421:intergenic | 35.0% |
! | TTTGGATATTTTCTTCCACG+GGG | + | 15252:8834-8853 | MS.gene034421:intergenic | 35.0% |
!! | GTCGTTGGTTCTTAAATACT+TGG | - | 15252:8060-8079 | MS.gene034421:CDS | 35.0% |
AAACCAACACATTCTCAACC+AGG | - | 15252:9803-9822 | MS.gene034421:intron | 40.0% | |
AAAGAAAGAGACACCTTACC+TGG | + | 15252:7963-7982 | MS.gene034421:intergenic | 40.0% | |
CACAACGGAGAATACGATTA+AGG | - | 15252:9774-9793 | MS.gene034421:intron | 40.0% | |
CAGTTATGGTTCAGCTTCAA+TGG | - | 15252:9386-9405 | MS.gene034421:intron | 40.0% | |
CATAGGTACAAAGCGAACTT+TGG | - | 15252:8938-8957 | MS.gene034421:CDS | 40.0% | |
CGATAGTCATACATTGACAC+CGG | - | 15252:8632-8651 | MS.gene034421:intron | 40.0% | |
GAACAAGAAAAGGAGGTTGA+TGG | - | 15252:9342-9361 | MS.gene034421:intron | 40.0% | |
GGGGTCAACATAATAATGAG+AGG | + | 15252:8518-8537 | MS.gene034421:intergenic | 40.0% | |
GGTGTGGGATTGTGAATTAT+TGG | - | 15252:8109-8128 | MS.gene034421:intron | 40.0% | |
GTCAAAAAACCGTCATTAGC+TGG | + | 15252:9447-9466 | MS.gene034421:intergenic | 40.0% | |
GTTGAAACTTAGCACAGGTT+TGG | + | 15252:8301-8320 | MS.gene034421:intergenic | 40.0% | |
TAACATTCATAGGGAGAGGA+AGG | + | 15252:9066-9085 | MS.gene034421:intergenic | 40.0% | |
TATGAACCTTGGGATTTACC+AGG | - | 15252:7942-7961 | MS.gene034421:CDS | 40.0% | |
TCACATGAAAGTGATTGTGC+TGG | - | 15252:9237-9256 | MS.gene034421:intron | 40.0% | |
TCGTGTCTATGTCAATGTGT+CGG | + | 15252:8615-8634 | MS.gene034421:intergenic | 40.0% | |
TTTCATGTGTTGTGTGTCGT+TGG | - | 15252:8045-8064 | MS.gene034421:CDS | 40.0% | |
TTTGGCATATTTGGAAGGTG+TGG | - | 15252:8093-8112 | MS.gene034421:CDS | 40.0% | |
! | AAAAGAGCGCAACGTGAAAT+CGG | - | 15252:8905-8924 | MS.gene034421:CDS | 40.0% |
! | AGTAAAAGAGCTACTGACTG+TGG | - | 15252:8864-8883 | MS.gene034421:CDS | 40.0% |
! | ATGTGTAGGTTTTTCATGGG+GGG | + | 15252:8537-8556 | MS.gene034421:intergenic | 40.0% |
! | CATCAAACGATTGGTCATTC+TGG | + | 15252:9876-9895 | MS.gene034421:intergenic | 40.0% |
! | GTAGGACAGAATCTAAAACC+AGG | + | 15252:7831-7850 | MS.gene034421:intergenic | 40.0% |
! | TGTTAACGCATTTAGGGTGA+GGG | + | 15252:8592-8611 | MS.gene034421:intergenic | 40.0% |
! | TTGGCATATTTGGAAGGTGT+GGG | - | 15252:8094-8113 | MS.gene034421:CDS | 40.0% |
!! | AGGTTGATGGTAGTTCCAAA+CGG | - | 15252:9355-9374 | MS.gene034421:intron | 40.0% |
!! | ATTGGGTTGATTAGCTTAGC+TGG | - | 15252:8127-8146 | MS.gene034421:intron | 40.0% |
!! | CGAACTTTGGTGTTTCACTT+AGG | - | 15252:8951-8970 | MS.gene034421:CDS | 40.0% |
!! | CGGTACTGATCATAGAGAAA+GGG | - | 15252:9311-9330 | MS.gene034421:intron | 40.0% |
!! | GGTACTGATCATAGAGAAAG+GGG | - | 15252:9312-9331 | MS.gene034421:intron | 40.0% |
!! | TGTCGGTGTTAACGCATTTA+GGG | + | 15252:8598-8617 | MS.gene034421:intergenic | 40.0% |
!!! | CGGTTTTTTGACAGACTCTT+CGG | - | 15252:9455-9474 | MS.gene034421:intron | 40.0% |
!!! | GGTTTTTTGACAGACTCTTC+GGG | - | 15252:9456-9475 | MS.gene034421:intron | 40.0% |
AATCAGCGACCAGCTAATGA+CGG | - | 15252:9435-9454 | MS.gene034421:intron | 45.0% | |
ACCTTACCTGGTAAATCCCA+AGG | + | 15252:7951-7970 | MS.gene034421:intergenic | 45.0% | |
ACCTTGGGATTTACCAGGTA+AGG | - | 15252:7947-7966 | MS.gene034421:CDS | 45.0% | |
AGTGACTGTGCTATCTCAGA+AGG | - | 15252:9288-9307 | MS.gene034421:intron | 45.0% | |
ATTGAAACCCTAGCCTCTGT+TGG | - | 15252:8218-8237 | MS.gene034421:intron | 45.0% | |
CAAAGAAGCTACTCTTGGAC+TGG | + | 15252:9853-9872 | MS.gene034421:intergenic | 45.0% | |
CATTCTGTCCTTTCACCCTT+AGG | + | 15252:8984-9003 | MS.gene034421:intergenic | 45.0% | |
CTAAGGGTGAAAGGACAGAA+TGG | - | 15252:8982-9001 | MS.gene034421:intron | 45.0% | |
CTACTCAGGCACATATGTGT+AGG | + | 15252:8551-8570 | MS.gene034421:intergenic | 45.0% | |
GGTGAGGGGATTTAGTGATA+AGG | + | 15252:8577-8596 | MS.gene034421:intergenic | 45.0% | |
TCTGGCAAAGAAGCTACTCT+TGG | + | 15252:9858-9877 | MS.gene034421:intergenic | 45.0% | |
TGGTTGTTTGTCGTCTCAAG+AGG | - | 15252:9148-9167 | MS.gene034421:intron | 45.0% | |
TGTCTGCGAACAAGAAAAGG+AGG | - | 15252:9335-9354 | MS.gene034421:intron | 45.0% | |
! | AAAGAGCGCAACGTGAAATC+GGG | - | 15252:8906-8925 | MS.gene034421:CDS | 45.0% |
! | ATATGTATGTTGGTGGGACC+TGG | - | 15252:8380-8399 | MS.gene034421:CDS | 45.0% |
! | GTGTTAACGCATTTAGGGTG+AGG | + | 15252:8593-8612 | MS.gene034421:intergenic | 45.0% |
! | GTTAACGCATTTAGGGTGAG+GGG | + | 15252:8591-8610 | MS.gene034421:intergenic | 45.0% |
! | TATGTATGTTGGTGGGACCT+GGG | - | 15252:8381-8400 | MS.gene034421:CDS | 45.0% |
!! | GCGGTACTGATCATAGAGAA+AGG | - | 15252:9310-9329 | MS.gene034421:intron | 45.0% |
!! | GGTTGATGGTAGTTCCAAAC+GGG | - | 15252:9356-9375 | MS.gene034421:intron | 45.0% |
!! | GTGTCGGTGTTAACGCATTT+AGG | + | 15252:8599-8618 | MS.gene034421:intergenic | 45.0% |
!! | GTTGATGGTAGTTCCAAACG+GGG | - | 15252:9357-9376 | MS.gene034421:intron | 45.0% |
!! | GTTTTTGAGAAACGAGCTCC+TGG | + | 15252:9824-9843 | MS.gene034421:intergenic | 45.0% |
AAACGGGGAAGCAGCAGTTA+TGG | - | 15252:9372-9391 | MS.gene034421:intron | 50.0% | |
CACTTAGGTCGTGCACCTAA+GGG | - | 15252:8966-8985 | MS.gene034421:intron | 50.0% | |
CCTAGCCTCTGTTGGTATCA+CGG | - | 15252:8226-8245 | MS.gene034421:intron | 50.0% | |
CGTGATACCAACAGAGGCTA+GGG | + | 15252:8228-8247 | MS.gene034421:intergenic | 50.0% | |
GACTGTGCTATCTCAGAAGG+CGG | - | 15252:9291-9310 | MS.gene034421:intron | 50.0% | |
GCACATTCTCATCCATGCCA+AGG | - | 15252:9746-9765 | MS.gene034421:intron | 50.0% | |
GCTCCTGGTTGAGAATGTGT+TGG | + | 15252:9809-9828 | MS.gene034421:intergenic | 50.0% | |
GGCATGGATGAGAATGTGCA+AGG | + | 15252:9745-9764 | MS.gene034421:intergenic | 50.0% | |
GGGTGTCTGCGAACAAGAAA+AGG | - | 15252:9332-9351 | MS.gene034421:intron | 50.0% | |
TCACACCGTGATACCAACAG+AGG | + | 15252:8234-8253 | MS.gene034421:intergenic | 50.0% | |
TCACTTAGGTCGTGCACCTA+AGG | - | 15252:8965-8984 | MS.gene034421:intron | 50.0% | |
TGTGGCTATTGGAAAGCCAC+TGG | - | 15252:8882-8901 | MS.gene034421:CDS | 50.0% | |
! | ACGAGTACTGTGTCAGTGAC+AGG | - | 15252:9012-9031 | MS.gene034421:intron | 50.0% |
! | ATAACTGCTGCTTCCCCGTT+TGG | + | 15252:9373-9392 | MS.gene034421:intergenic | 50.0% |
! | ATGTATGTTGGTGGGACCTG+GGG | - | 15252:8382-8401 | MS.gene034421:CDS | 50.0% |
! | GAGCTACTGACTGTGGCTAT+TGG | - | 15252:8871-8890 | MS.gene034421:CDS | 50.0% |
AGACTCTTCGGGCCAGCTAA+AGG | - | 15252:9467-9486 | MS.gene034421:intron | 55.0% | |
CCGTGATACCAACAGAGGCT+AGG | + | 15252:8229-8248 | MS.gene034421:intergenic | 55.0% | |
CTGTGTCAGTGACAGGTCTC+CGG | - | 15252:9019-9038 | MS.gene034421:intron | 55.0% | |
GCTGCTTCGTCTATGTTCCC+TGG | - | 15252:7810-7829 | MS.gene034421:CDS | 55.0% | |
GTCGTGCACCTAAGGGTGAA+AGG | - | 15252:8973-8992 | MS.gene034421:intron | 55.0% | |
TGGTTCTTCTTCTCTCCCCG+TGG | - | 15252:8816-8835 | MS.gene034421:CDS | 55.0% | |
TTCTCCGTTGTGCAGTGCCT+TGG | + | 15252:9766-9785 | MS.gene034421:intergenic | 55.0% | |
! | CACGTTGCGCTCTTTTCCAG+TGG | + | 15252:8901-8920 | MS.gene034421:intergenic | 55.0% |
! | GCACAGGTTTGGTATCACCG+TGG | + | 15252:8290-8309 | MS.gene034421:intergenic | 55.0% |
!! | CATGCCAAGGCACTGCACAA+CGG | - | 15252:9759-9778 | MS.gene034421:intron | 55.0% |
CGTTGTGCAGTGCCTTGGCA+TGG | + | 15252:9761-9780 | MS.gene034421:intergenic | 60.0% | |
GTCAGTGACAGGTCTCCGGT+GGG | - | 15252:9023-9042 | MS.gene034421:intron | 60.0% | |
TGTCAGTGACAGGTCTCCGG+TGG | - | 15252:9022-9041 | MS.gene034421:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
15252 | gene | 7771 | 9997 | 7771 | ID=MS.gene034421 |
15252 | mRNA | 7771 | 9997 | 7771 | ID=MS.gene034421.t1;Parent=MS.gene034421 |
15252 | exon | 9805 | 9997 | 9805 | ID=MS.gene034421.t1.exon1;Parent=MS.gene034421.t1 |
15252 | CDS | 9805 | 9997 | 9805 | ID=cds.MS.gene034421.t1;Parent=MS.gene034421.t1 |
15252 | exon | 8728 | 8981 | 8728 | ID=MS.gene034421.t1.exon2;Parent=MS.gene034421.t1 |
15252 | CDS | 8728 | 8981 | 8728 | ID=cds.MS.gene034421.t1;Parent=MS.gene034421.t1 |
15252 | exon | 8280 | 8627 | 8280 | ID=MS.gene034421.t1.exon3;Parent=MS.gene034421.t1 |
15252 | CDS | 8280 | 8627 | 8280 | ID=cds.MS.gene034421.t1;Parent=MS.gene034421.t1 |
15252 | exon | 7771 | 8124 | 7771 | ID=MS.gene034421.t1.exon4;Parent=MS.gene034421.t1 |
15252 | CDS | 7771 | 8124 | 7771 | ID=cds.MS.gene034421.t1;Parent=MS.gene034421.t1 |
Gene Sequence |
Protein sequence |