AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene66962


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene66962.t1 MTR_6g032770 93.085 376 17 1 2 368 4 379 0.0 712
MS.gene66962.t1 MTR_7g085260 59.102 401 109 15 1 364 1 383 2.93e-139 401
MS.gene66962.t1 MTR_4g108760 50.146 343 147 11 5 339 6 332 7.74e-100 300
MS.gene66962.t1 MTR_3g435150 61.792 212 75 5 1 211 1 207 2.37e-88 268
MS.gene66962.t1 MTR_6g012670 61.576 203 68 4 9 210 13 206 3.65e-84 258
MS.gene66962.t1 MTR_2g078700 72.258 155 43 0 16 170 23 177 3.37e-82 255
MS.gene66962.t1 MTR_3g070030 43.293 328 160 6 11 332 14 321 2.53e-77 242
MS.gene66962.t1 MTR_1g008740 62.573 171 60 2 16 185 13 180 4.60e-73 231
MS.gene66962.t1 MTR_1g008740 62.573 171 60 2 16 185 27 194 7.13e-73 231
MS.gene66962.t1 MTR_7g011130 47.761 268 113 6 11 255 14 277 7.70e-71 225
MS.gene66962.t1 MTR_6g084430 64.286 168 51 4 15 180 4 164 7.54e-70 222
MS.gene66962.t1 MTR_3g109340 46.559 247 108 4 16 253 22 253 4.57e-68 218
MS.gene66962.t1 MTR_3g109340 45.749 247 111 4 16 253 22 254 9.54e-68 218
MS.gene66962.t1 MTR_7g011120 60.479 167 57 2 11 170 3 167 5.02e-67 214
MS.gene66962.t1 MTR_3g116070 71.318 129 36 1 16 143 23 151 4.46e-64 208
MS.gene66962.t1 MTR_3g070040 38.268 358 192 9 11 364 3 335 3.46e-63 205
MS.gene66962.t1 MTR_2g064470 53.191 188 76 5 16 203 11 186 2.18e-60 197
MS.gene66962.t1 MTR_1g069805 53.503 157 67 2 16 172 10 160 4.34e-55 182
MS.gene66962.t1 MTR_2g062730 53.750 160 66 3 14 170 8 162 6.92e-54 181
MS.gene66962.t1 MTR_4g035590 54.375 160 61 4 16 171 8 159 7.24e-53 179
MS.gene66962.t1 MTR_7g097090 54.305 151 63 2 16 166 10 154 1.09e-52 176
MS.gene66962.t1 MTR_8g076110 51.220 164 71 4 16 176 6 163 1.34e-52 177
MS.gene66962.t1 MTR_8g059170 51.190 168 80 1 14 181 12 177 1.36e-52 177
MS.gene66962.t1 MTR_2g064090 50.299 167 77 4 13 177 3 165 1.86e-52 177
MS.gene66962.t1 MTR_4g101680 49.701 167 75 3 16 179 7 167 1.99e-52 178
MS.gene66962.t1 MTR_5g041940 50.000 160 76 2 14 171 1 158 2.38e-52 174
MS.gene66962.t1 MTR_2g080010 46.961 181 86 3 1 172 1 180 2.76e-52 177
MS.gene66962.t1 MTR_4g089135 47.727 176 71 2 16 170 15 190 5.39e-52 176
MS.gene66962.t1 MTR_7g085220 47.486 179 83 4 15 183 7 184 6.41e-52 176
MS.gene66962.t1 MTR_2157s0010 42.793 222 102 6 16 214 8 227 9.23e-52 173
MS.gene66962.t1 MTR_8g024480 50.303 165 70 4 16 170 15 177 5.53e-51 176
MS.gene66962.t1 MTR_6g477900 46.328 177 87 4 13 185 3 175 7.35e-51 170
MS.gene66962.t1 MTR_5g021710 48.795 166 76 4 16 178 8 167 8.29e-51 173
MS.gene66962.t1 MTR_3g064580 51.235 162 72 4 13 171 3 160 9.82e-51 180
MS.gene66962.t1 MTR_3g088110 50.581 172 76 4 14 181 5 171 1.11e-50 171
MS.gene66962.t1 MTR_8g467490 38.039 255 135 5 1 234 1 253 1.15e-50 174
MS.gene66962.t1 MTR_5g076850 49.398 166 78 3 13 176 3 164 2.43e-50 178
MS.gene66962.t1 MTR_4g036030 50.000 156 69 3 16 168 7 156 3.65e-50 171
MS.gene66962.t1 MTR_2g079990 46.829 205 91 5 14 206 14 212 6.71e-50 171
MS.gene66962.t1 MTR_5g012080 51.266 158 66 5 16 168 7 158 2.56e-49 169
MS.gene66962.t1 MTR_7g100990 51.299 154 73 2 14 165 9 162 7.03e-49 167
MS.gene66962.t1 MTR_8g094580 50.307 163 64 3 14 168 5 158 8.49e-49 166
MS.gene66962.t1 MTR_5g040420 45.161 186 94 3 1 180 1 184 1.48e-48 169
MS.gene66962.t1 MTR_4g081870 47.799 159 79 2 15 171 8 164 1.87e-48 165
MS.gene66962.t1 MTR_7g005280 47.619 168 80 4 1 168 1 160 1.01e-47 162
MS.gene66962.t1 MTR_3g096920 48.193 166 82 2 14 178 5 167 1.05e-47 164
MS.gene66962.t1 MTR_1g096430 48.718 156 71 4 16 168 7 156 2.45e-47 164
MS.gene66962.t1 MTR_6g011860 45.029 171 83 3 7 170 9 175 2.89e-47 165
MS.gene66962.t1 MTR_2g093810 50.000 152 74 2 16 165 14 165 5.05e-47 162
MS.gene66962.t1 MTR_2g079990 58.462 130 52 1 14 143 14 141 7.36e-47 164
MS.gene66962.t1 MTR_1g097300 44.175 206 102 7 19 217 22 221 1.10e-46 167
MS.gene66962.t1 MTR_3g096920 48.837 172 67 4 14 182 5 158 4.72e-45 157
MS.gene66962.t1 MTR_5g014300 48.684 152 63 3 16 152 6 157 3.13e-44 155
MS.gene66962.t1 MTR_5g069030 48.148 162 68 4 16 170 25 177 3.51e-44 161
MS.gene66962.t1 MTR_3g093050 47.753 178 69 5 16 178 22 190 5.46e-44 160
MS.gene66962.t1 MTR_3g093050 47.753 178 69 5 16 178 22 190 7.22e-44 160
MS.gene66962.t1 MTR_4g098630 49.286 140 68 2 12 148 2 141 6.92e-43 152
MS.gene66962.t1 MTR_3g096140 48.366 153 71 4 19 168 10 157 7.77e-43 150
MS.gene66962.t1 MTR_2g068920 42.268 194 97 6 1 182 9 199 3.35e-42 149
MS.gene66962.t1 MTR_2g068880 43.590 195 91 9 1 182 9 197 3.65e-42 149
MS.gene66962.t1 MTR_3g096140 48.366 153 71 4 19 168 10 157 4.45e-42 150
MS.gene66962.t1 MTR_5g090970 51.825 137 64 2 8 143 11 146 5.09e-42 149
MS.gene66962.t1 MTR_1g090723 49.682 157 66 6 19 169 11 160 6.18e-42 155
MS.gene66962.t1 MTR_8g063550 47.436 156 74 4 16 168 6 156 9.33e-42 149
MS.gene66962.t1 MTR_3g093040 45.732 164 73 4 14 170 106 260 2.15e-41 147
MS.gene66962.t1 MTR_8g063550 47.436 156 74 4 16 168 6 156 3.66e-41 150
MS.gene66962.t1 MTR_8g063550 47.436 156 74 4 16 168 6 156 3.81e-41 150
MS.gene66962.t1 MTR_4g134460 52.800 125 58 1 19 143 57 180 4.13e-41 150
MS.gene66962.t1 MTR_1g090723 49.045 157 66 6 19 169 11 159 4.44e-41 152
MS.gene66962.t1 MTR_1g090723 49.045 157 66 6 19 169 11 159 4.73e-41 152
MS.gene66962.t1 MTR_1g090720 40.191 209 108 5 16 214 42 243 5.84e-41 150
MS.gene66962.t1 MTR_5g090970 51.825 137 63 3 8 143 11 145 1.62e-40 145
MS.gene66962.t1 MTR_0036s0150 49.682 157 65 6 19 169 8 156 2.52e-40 149
MS.gene66962.t1 MTR_4g075980 44.172 163 82 4 7 168 7 161 5.24e-40 144
MS.gene66962.t1 MTR_8g093580 46.154 156 76 4 16 168 6 156 3.21e-39 145
MS.gene66962.t1 MTR_2g086880 43.558 163 79 5 5 157 3 162 8.19e-39 145
MS.gene66962.t1 MTR_2g086880 43.558 163 79 5 5 157 3 162 1.01e-38 145
MS.gene66962.t1 MTR_8g023840 48.092 131 64 3 15 142 10 139 3.28e-35 133
MS.gene66962.t1 MTR_3g096140 47.143 140 66 4 32 168 2 136 9.56e-35 130
MS.gene66962.t1 MTR_8g099750 37.821 156 92 2 16 168 14 167 1.60e-34 127
MS.gene66962.t1 MTR_3g098810 37.000 200 99 6 16 191 14 210 3.47e-34 126
MS.gene66962.t1 MTR_8g023860 46.154 130 66 3 16 142 12 140 1.91e-32 126
MS.gene66962.t1 MTR_3g098810 38.889 162 94 3 16 175 14 172 4.72e-32 119
MS.gene66962.t1 MTR_8g094580 52.679 112 36 3 65 168 2 104 8.00e-31 117
MS.gene66962.t1 MTR_8g023900 39.869 153 80 4 16 157 12 163 9.18e-30 119
MS.gene66962.t1 MTR_8g023900 39.855 138 78 4 13 147 190 325 1.53e-26 110
MS.gene66962.t1 MTR_4g052620 42.537 134 67 4 16 142 5 135 7.73e-29 113
MS.gene66962.t1 MTR_8g023930 38.816 152 81 5 16 157 24 173 2.24e-28 115
MS.gene66962.t1 MTR_2g086690 40.299 134 73 3 15 142 3 135 3.53e-28 110
MS.gene66962.t1 MTR_8g023880 34.762 210 103 8 16 203 7 204 7.87e-26 105
MS.gene66962.t1 MTR_4g094302 37.500 128 72 1 16 143 11 130 2.07e-24 98.2
MS.gene66962.t1 MTR_7g070140 51.282 78 38 0 69 146 17 94 3.54e-24 97.1
MS.gene66962.t1 MTR_4g094302 30.851 188 118 2 16 199 11 190 4.56e-24 98.2
MS.gene66962.t1 MTR_7g105170 38.060 134 76 4 15 142 3 135 5.26e-24 99.8
MS.gene66962.t1 MTR_7g083360 35.821 134 80 4 10 141 4 133 1.65e-19 84.7
MS.gene66962.t1 MTR_8g093790 34.591 159 80 5 10 168 4 138 9.45e-18 80.9
MS.gene66962.t1 MTR_7g083330 33.571 140 86 5 10 147 12 146 2.29e-17 79.7
MS.gene66962.t1 MTR_7g083370 34.109 129 79 4 15 141 9 133 5.25e-17 77.4
MS.gene66962.t1 MTR_4g088245 32.864 213 103 10 16 201 68 267 5.14e-16 78.6
MS.gene66962.t1 MTR_3g096400 30.337 178 103 7 16 181 7 175 3.97e-15 73.9
MS.gene66962.t1 MTR_7g070150 43.056 72 36 1 110 181 4 70 1.84e-14 68.9
MS.gene66962.t1 MTR_7g116460 28.977 176 106 7 22 189 11 175 1.49e-11 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene66962.t1 AT5G18270 51.420 352 112 11 1 338 5 311 3.77e-107 318
MS.gene66962.t1 AT5G18270 51.136 352 113 11 1 338 5 311 7.72e-107 317
MS.gene66962.t1 AT3G04060 46.900 371 157 8 2 368 4 338 4.56e-99 297
MS.gene66962.t1 AT5G07680 46.448 366 148 12 5 364 6 329 5.12e-92 279
MS.gene66962.t1 AT5G07680 47.059 357 141 12 14 364 1 315 6.75e-91 276
MS.gene66962.t1 AT5G61430 44.892 372 145 13 1 356 1 328 6.04e-89 271
MS.gene66962.t1 AT3G29035 49.495 297 121 7 12 290 20 305 9.25e-83 255
MS.gene66962.t1 AT5G39610 70.303 165 47 1 5 169 9 171 1.60e-81 251
MS.gene66962.t1 AT3G15170 55.660 212 86 2 11 215 16 226 2.26e-77 241
MS.gene66962.t1 AT5G53950 67.949 156 50 0 16 171 17 172 2.45e-77 243
MS.gene66962.t1 AT1G76420 64.103 156 47 2 16 168 22 171 2.18e-69 221
MS.gene66962.t1 AT3G18400 63.750 160 53 2 15 174 4 158 3.34e-69 220
MS.gene66962.t1 AT2G24430 58.333 168 67 1 1 168 1 165 1.26e-67 216
MS.gene66962.t1 AT2G24430 58.333 168 67 1 1 168 1 165 1.26e-67 216
MS.gene66962.t1 AT1G56010 49.761 209 88 5 16 216 19 218 1.51e-62 203
MS.gene66962.t1 AT3G12977 54.487 156 68 2 15 170 17 169 2.88e-61 198
MS.gene66962.t1 AT5G61430 41.883 308 119 13 65 356 2 265 5.23e-59 192
MS.gene66962.t1 AT4G10350 52.830 159 68 3 16 171 9 163 4.82e-54 181
MS.gene66962.t1 AT1G33280 52.830 159 65 3 16 171 8 159 2.03e-53 179
MS.gene66962.t1 AT3G17730 50.932 161 73 3 13 171 3 159 9.71e-53 175
MS.gene66962.t1 AT4G27410 40.741 243 116 5 14 234 12 248 4.63e-52 175
MS.gene66962.t1 AT1G12260 49.701 167 75 3 16 179 7 167 9.02e-52 176
MS.gene66962.t1 AT1G12260 49.701 167 75 3 16 179 7 167 1.11e-51 177
MS.gene66962.t1 AT5G08790 50.602 166 64 3 14 170 5 161 1.19e-51 174
MS.gene66962.t1 AT3G61910 47.953 171 71 4 16 171 11 178 1.81e-51 174
MS.gene66962.t1 AT3G03200 51.829 164 74 3 13 174 3 163 2.67e-51 178
MS.gene66962.t1 AT4G36160 46.409 181 86 5 6 181 4 178 3.37e-51 175
MS.gene66962.t1 AT1G61110 50.909 165 70 3 16 170 16 179 3.54e-51 174
MS.gene66962.t1 AT2G46770 47.368 171 74 4 16 172 16 184 5.76e-51 174
MS.gene66962.t1 AT4G36160 47.727 176 81 5 11 181 5 174 5.77e-51 174
MS.gene66962.t1 AT4G36160 47.727 176 81 5 11 181 5 174 5.77e-51 174
MS.gene66962.t1 AT1G77450 48.603 179 84 3 9 184 3 176 6.99e-51 171
MS.gene66962.t1 AT4G28530 44.240 217 90 6 16 209 10 218 9.76e-51 173
MS.gene66962.t1 AT3G04070 50.000 166 75 4 16 173 10 175 1.62e-50 172
MS.gene66962.t1 AT1G79580 50.625 160 70 3 14 170 15 168 2.44e-50 173
MS.gene66962.t1 AT1G79580 50.625 160 70 3 14 170 15 168 2.44e-50 173
MS.gene66962.t1 AT1G79580 50.625 160 70 3 14 170 15 168 2.44e-50 173
MS.gene66962.t1 AT1G79580 50.625 160 70 3 14 170 15 168 2.44e-50 173
MS.gene66962.t1 AT1G79580 50.625 160 70 3 14 170 15 168 2.44e-50 173
MS.gene66962.t1 AT2G18060 47.929 169 79 4 12 177 5 167 2.87e-50 172
MS.gene66962.t1 AT2G18060 47.929 169 79 4 12 177 5 167 2.87e-50 172
MS.gene66962.t1 AT5G63790 51.266 158 71 2 14 168 48 202 3.51e-50 171
MS.gene66962.t1 AT5G63790 51.266 158 71 2 14 168 58 212 3.97e-50 171
MS.gene66962.t1 AT5G04410 53.503 157 65 4 16 169 9 160 6.06e-50 176
MS.gene66962.t1 AT5G17260 50.610 164 76 3 13 174 3 163 6.06e-50 174
MS.gene66962.t1 AT1G62700 51.282 156 67 3 16 168 7 156 9.70e-50 172
MS.gene66962.t1 AT1G62700 51.282 156 67 3 16 168 7 156 9.70e-50 172
MS.gene66962.t1 AT1G01720 48.193 166 81 2 12 175 3 165 1.51e-49 168
MS.gene66962.t1 AT1G65910 48.447 161 77 3 13 171 3 159 3.80e-49 175
MS.gene66962.t1 AT1G71930 49.682 157 68 5 16 168 9 158 4.74e-49 168
MS.gene66962.t1 AT1G71930 49.682 157 68 5 16 168 9 158 4.74e-49 168
MS.gene66962.t1 AT1G32770 47.619 168 75 3 16 172 16 181 6.28e-49 169
MS.gene66962.t1 AT1G26870 45.349 172 87 1 16 180 16 187 1.19e-48 169
MS.gene66962.t1 AT1G69490 50.000 156 74 3 16 169 9 162 1.34e-48 165
MS.gene66962.t1 AT3G10500 52.229 157 67 4 16 169 9 160 1.48e-48 172
MS.gene66962.t1 AT3G04070 45.604 182 75 4 16 173 10 191 1.72e-48 167
MS.gene66962.t1 AT5G39820 53.521 142 64 2 2 143 8 147 1.91e-48 167
MS.gene66962.t1 AT5G62380 50.641 156 68 4 16 168 7 156 2.56e-48 167
MS.gene66962.t1 AT5G62380 50.641 156 68 4 16 168 7 156 2.56e-48 167
MS.gene66962.t1 AT3G15500 48.538 171 80 4 14 183 12 175 3.74e-48 166
MS.gene66962.t1 AT5G13180 50.323 155 71 2 14 168 12 160 4.22e-48 163
MS.gene66962.t1 AT3G15510 46.875 160 76 2 20 170 21 180 5.26e-48 166
MS.gene66962.t1 AT5G66300 46.012 163 80 3 11 170 7 164 6.06e-48 164
MS.gene66962.t1 AT1G52890 50.000 164 76 3 14 176 12 170 8.02e-48 164
MS.gene66962.t1 AT4G27410 38.077 260 116 6 14 234 12 265 9.18e-48 164
MS.gene66962.t1 AT5G46590 49.080 163 73 4 16 173 6 163 1.73e-47 163
MS.gene66962.t1 AT3G10480 53.125 160 66 4 16 171 27 181 1.77e-47 167
MS.gene66962.t1 AT3G10480 52.532 158 69 3 16 171 27 180 3.57e-47 166
MS.gene66962.t1 AT3G10490 51.875 160 68 4 16 171 27 181 5.13e-47 160
MS.gene66962.t1 AT5G46590 49.032 155 73 3 16 165 6 159 1.44e-46 160
MS.gene66962.t1 AT1G54330 48.485 165 75 4 13 175 3 159 2.97e-46 160
MS.gene66962.t1 AT3G10490 51.875 160 68 4 16 171 27 181 5.35e-46 163
MS.gene66962.t1 AT1G33060 55.797 138 52 3 16 146 24 159 1.15e-45 166
MS.gene66962.t1 AT1G33060 55.797 138 52 3 16 146 24 159 1.15e-45 166
MS.gene66962.t1 AT4G35580 55.072 138 53 3 16 146 9 144 4.00e-45 162
MS.gene66962.t1 AT4G35580 55.072 138 53 3 16 146 9 144 5.62e-45 162
MS.gene66962.t1 AT4G35580 55.072 138 53 3 16 146 9 144 5.95e-45 162
MS.gene66962.t1 AT4G17980 53.077 130 59 1 16 143 6 135 7.10e-45 155
MS.gene66962.t1 AT5G24590 38.961 231 117 7 16 232 13 233 1.15e-44 160
MS.gene66962.t1 AT4G17980 53.077 130 59 1 16 143 6 135 1.23e-44 155
MS.gene66962.t1 AT3G49530 45.238 168 87 3 16 181 13 177 3.85e-44 157
MS.gene66962.t1 AT2G27300 48.252 143 67 3 19 156 17 157 6.84e-44 155
MS.gene66962.t1 AT2G33480 49.068 161 61 4 14 168 13 158 7.56e-44 153
MS.gene66962.t1 AT5G64060 42.262 168 89 4 16 180 6 168 8.46e-44 155
MS.gene66962.t1 AT2G33480 49.686 159 65 4 14 168 13 160 8.77e-44 152
MS.gene66962.t1 AT2G17040 46.795 156 74 4 14 168 5 152 1.18e-43 152
MS.gene66962.t1 AT3G49530 53.488 129 57 2 16 142 13 140 1.44e-43 157
MS.gene66962.t1 AT2G02450 53.600 125 57 1 19 143 54 177 3.27e-43 154
MS.gene66962.t1 AT2G43000 37.768 233 133 4 19 245 21 247 3.87e-43 151
MS.gene66962.t1 AT2G02450 53.600 125 57 1 19 143 54 177 4.36e-43 155
MS.gene66962.t1 AT1G56010 50.314 159 63 4 65 216 2 151 6.24e-42 147
MS.gene66962.t1 AT3G10480 42.424 198 62 4 16 171 27 214 3.23e-41 152
MS.gene66962.t1 AT5G09330 45.860 157 77 4 16 169 6 157 5.11e-41 150
MS.gene66962.t1 AT5G09330 45.860 157 77 4 16 169 6 157 5.11e-41 150
MS.gene66962.t1 AT5G09330 45.860 157 77 4 16 169 6 157 5.11e-41 150
MS.gene66962.t1 AT5G09330 45.860 157 77 4 16 169 6 157 5.11e-41 150
MS.gene66962.t1 AT5G09330 45.860 157 77 4 16 169 6 157 5.11e-41 150
MS.gene66962.t1 AT1G32510 41.053 190 98 4 16 195 6 191 1.17e-40 145
MS.gene66962.t1 AT1G34180 45.806 155 74 5 19 169 19 167 1.77e-40 148
MS.gene66962.t1 AT1G34190 45.806 155 74 5 19 169 19 167 2.57e-40 150
MS.gene66962.t1 AT1G52880 46.541 159 77 3 20 170 21 179 3.94e-40 144
MS.gene66962.t1 AT1G34180 45.806 155 74 5 19 169 19 167 6.21e-40 149
MS.gene66962.t1 AT3G12910 51.471 136 61 4 11 143 17 150 3.10e-39 142
MS.gene66962.t1 AT3G12977 46.980 149 72 4 65 209 14 159 4.21e-39 139
MS.gene66962.t1 AT1G34180 42.515 167 74 5 19 169 19 179 1.33e-38 144
MS.gene66962.t1 AT1G34180 42.515 167 74 5 19 169 19 179 4.58e-38 144
MS.gene66962.t1 AT1G32870 47.059 170 82 5 3 169 33 197 6.01e-38 143
MS.gene66962.t1 AT1G32870 48.408 157 73 5 16 169 10 161 1.05e-37 142
MS.gene66962.t1 AT1G32870 48.408 157 73 5 16 169 10 161 1.11e-37 142
MS.gene66962.t1 AT5G22290 42.657 143 74 3 19 155 24 164 2.04e-37 138
MS.gene66962.t1 AT3G44290 43.056 144 75 3 19 157 17 158 6.14e-37 133
MS.gene66962.t1 AT3G44290 43.056 144 75 3 19 157 17 158 2.40e-36 135
MS.gene66962.t1 AT5G04395 44.366 142 65 2 16 143 28 169 1.40e-34 126
MS.gene66962.t1 AT4G10350 53.509 114 46 3 61 171 7 116 1.89e-34 129
MS.gene66962.t1 AT4G28530 46.094 128 53 1 16 127 10 137 3.35e-30 118
MS.gene66962.t1 AT2G33480 53.000 100 43 2 69 168 8 103 1.52e-27 108
MS.gene66962.t1 AT1G02230 38.542 192 95 9 17 203 4 177 1.65e-27 111
MS.gene66962.t1 AT4G01550 40.000 155 82 6 18 168 6 153 3.45e-27 112
MS.gene66962.t1 AT3G44350 33.540 161 100 4 15 170 4 162 5.49e-26 104
MS.gene66962.t1 AT3G44350 36.025 161 92 5 15 168 4 160 2.29e-25 100
MS.gene66962.t1 AT5G22380 33.750 160 97 5 15 167 4 161 2.51e-25 102
MS.gene66962.t1 AT1G02250 40.458 131 70 4 17 142 4 131 3.47e-24 102
MS.gene66962.t1 AT3G04420 39.535 129 72 3 17 141 4 130 1.28e-23 99.8
MS.gene66962.t1 AT4G01520 38.961 154 82 7 17 165 5 151 1.76e-23 99.4
MS.gene66962.t1 AT3G04420 39.535 129 72 3 17 141 4 130 5.37e-23 99.0
MS.gene66962.t1 AT4G01540 39.355 155 82 7 19 168 7 154 1.23e-22 98.6
MS.gene66962.t1 AT4G01540 39.355 155 82 7 19 168 7 154 1.31e-22 98.6
MS.gene66962.t1 AT5G64530 36.154 130 71 2 14 143 1 118 1.47e-22 93.2
MS.gene66962.t1 AT4G01540 39.355 155 82 7 19 168 7 154 1.69e-22 99.0
MS.gene66962.t1 AT4G01540 39.474 152 80 7 19 165 7 151 1.73e-22 98.6
MS.gene66962.t1 AT5G64530 36.154 130 71 2 14 143 1 118 2.81e-22 93.2
MS.gene66962.t1 AT1G01010 32.941 170 88 6 18 167 5 168 2.51e-21 95.1
MS.gene66962.t1 AT3G10490 58.824 85 28 3 89 171 2 81 1.13e-20 92.4
MS.gene66962.t1 AT3G10490 58.824 85 28 3 89 171 2 81 1.13e-20 92.4
MS.gene66962.t1 AT5G50820 34.731 167 87 7 14 170 15 169 4.10e-20 87.4
MS.gene66962.t1 AT1G02220 36.364 132 75 4 14 141 1 127 4.75e-20 90.9
MS.gene66962.t1 AT2G43000 40.496 121 69 2 78 198 2 119 8.31e-19 84.0
MS.gene66962.t1 AT2G18060 47.619 84 38 3 94 177 2 79 8.91e-18 82.8
MS.gene66962.t1 AT5G14000 34.694 147 87 4 1 145 3 142 1.57e-17 79.3
MS.gene66962.t1 AT5G14000 31.073 177 108 5 1 175 3 167 3.73e-17 79.7
MS.gene66962.t1 AT5G22290 45.455 66 29 2 95 155 2 65 5.29e-15 74.3
MS.gene66962.t1 AT1G28470 34.682 173 84 9 16 170 77 238 9.13e-14 71.6
MS.gene66962.t1 AT3G56530 28.846 156 100 5 16 167 52 200 1.03e-12 68.6
MS.gene66962.t1 AT3G04430 32.576 132 77 3 22 142 6 136 1.40e-12 66.6
MS.gene66962.t1 AT4G29230 32.597 181 85 10 14 168 46 215 3.46e-12 68.2
MS.gene66962.t1 AT4G29230 32.597 181 85 10 14 168 45 214 3.51e-12 67.8
MS.gene66962.t1 AT4G29230 32.961 179 83 10 14 166 46 213 3.76e-12 67.8
MS.gene66962.t1 AT4G28500 32.948 173 88 8 16 170 59 221 4.31e-12 66.6
MS.gene66962.t1 AT3G55210 27.545 167 97 6 16 167 11 168 8.24e-12 65.5
MS.gene66962.t1 AT1G25580 30.732 205 106 11 16 204 58 242 2.36e-11 65.5

Find 74 sgRNAs with CRISPR-Local

Find 113 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AATAGCAATGGTTACATTTA+TGG 0.087192 6.4:-4192144 MS.gene66962:CDS
TCAAGGGTGTGTTTGGAATT+TGG 0.153879 6.4:+4192211 None:intergenic
CTCAATAGGTGATGATTTAT+TGG 0.165403 6.4:-4192445 MS.gene66962:CDS
AATGTGCTTCTTTGCATTAA+TGG 0.210014 6.4:+4192261 None:intergenic
CATTAATGGACCATTGAAAT+TGG 0.275416 6.4:+4192275 None:intergenic
GTTGTTTCAAAGCAAGAAAT+TGG 0.286514 6.4:-4192012 MS.gene66962:CDS
GTAATGATTTCATCATCATT+AGG 0.301951 6.4:+4193687 None:intergenic
TTCTCATTCAAGGGTGTGTT+TGG 0.320860 6.4:+4192204 None:intergenic
TGAGTTCACCCTTAAAAGAT+TGG 0.333752 6.4:+4192464 None:intergenic
TCAATGGTATTGTTGCTAAA+AGG 0.335190 6.4:+4192390 None:intergenic
AAAACTCTTGTGTTCTATAA+AGG 0.349650 6.4:-4193227 MS.gene66962:CDS
GAACCTCTTGATTTGCCTGC+TGG 0.358232 6.4:-4193723 MS.gene66962:CDS
ACTAATAGAGCAACTGAATC+AGG 0.363531 6.4:-4193320 MS.gene66962:CDS
GAGCAACTGAATCAGGCTAT+TGG 0.368357 6.4:-4193313 MS.gene66962:CDS
ATTCTCTACCAACAATTCTA+TGG 0.370549 6.4:-4192091 MS.gene66962:CDS
ATATATAATTGCAGGATGAT+TGG 0.372396 6.4:-4192545 MS.gene66962:intron
TAATGATTTCATCATCATTA+GGG 0.381801 6.4:+4193688 None:intergenic
TAGCAACTTGCAATCTTCCT+AGG 0.387999 6.4:-4193142 MS.gene66962:CDS
TGATAACATGTTCTCATTCA+AGG 0.390664 6.4:+4192194 None:intergenic
TTCTTCACTTCCACCTCTTG+TGG 0.398001 6.4:-4192418 MS.gene66962:CDS
CAATGGTTACATTTATGGAT+TGG 0.400827 6.4:-4192139 MS.gene66962:CDS
GGTCATGCATGAATTTAGAT+TGG 0.403946 6.4:-4193174 MS.gene66962:CDS
CTATTAGTTCTTGTTCCAGT+TGG 0.407304 6.4:+4193335 None:intergenic
CTAAGATGGGAGAGAAAGAT+TGG 0.407819 6.4:-4193388 MS.gene66962:CDS
CCCTCTCAAATCTTGAATCA+TGG 0.416301 6.4:-4191939 MS.gene66962:CDS
CTTGAGGGACCTTCATCAAT+TGG 0.427017 6.4:-4191964 MS.gene66962:CDS
GGAATTTGGATTTGAGTTTG+AGG 0.428910 6.4:+4192225 None:intergenic
TCAGGCTATTGGAAAGCAAC+TGG 0.434898 6.4:-4193302 MS.gene66962:CDS
AAATTCATGCATGACCCAAT+TGG 0.452348 6.4:+4193181 None:intergenic
TTTGAATAGGTGTGAGCCTT+GGG 0.455631 6.4:-4193601 MS.gene66962:CDS
AATTATTCATACATGAATCA+AGG 0.456946 6.4:-4192171 MS.gene66962:CDS
AATGCTCACCATAGAATTGT+TGG 0.464393 6.4:+4192083 None:intergenic
TTTGAAGTCATGATCATCAA+TGG 0.465809 6.4:+4192374 None:intergenic
TTGGTGAAGCTGATTTGAAT+AGG 0.466419 6.4:-4193614 MS.gene66962:CDS
ATGCATGAATTTAGATTGGA+TGG 0.466731 6.4:-4193170 MS.gene66962:CDS
TATATAATTGCAGGATGATT+GGG 0.467236 6.4:-4192544 MS.gene66962:intron
CAAGAGGAGAGAAAACCAAT+TGG 0.473553 6.4:-4193196 MS.gene66962:CDS
CCATCACCTTCATCATCAAA+TGG 0.475218 6.4:-4192342 MS.gene66962:CDS
TCATTGTTCATTAAGTAGCT+TGG 0.477838 6.4:+4192309 None:intergenic
CAATATCCATTTGATGATGA+AGG 0.479530 6.4:+4192336 None:intergenic
CCTCTCAAATCTTGAATCAT+GGG 0.480354 6.4:-4191938 MS.gene66962:CDS
GATAACATGTTCTCATTCAA+GGG 0.484003 6.4:+4192195 None:intergenic
ATTTGAATAGGTGTGAGCCT+TGG 0.489701 6.4:-4193602 MS.gene66962:CDS
GGGAAAAGTAACCAACTTGT+TGG 0.500121 6.4:-4193257 MS.gene66962:CDS
ACTAATCTCACCAATTTCAA+TGG 0.503686 6.4:-4192285 MS.gene66962:CDS
TTTCAAAGCAAGAAATTGGA+AGG 0.507485 6.4:-4192008 MS.gene66962:CDS
CCATGATTCAAGATTTGAGA+GGG 0.508069 6.4:+4191939 None:intergenic
AGAGATAGGAAATATCCAAC+TGG 0.508548 6.4:-4193350 MS.gene66962:CDS
GGATGATTGGGTTGTGTCAA+AGG 0.512395 6.4:-4192532 MS.gene66962:CDS
GAGAGGGGACCAATTGATGA+AGG 0.528326 6.4:+4191955 None:intergenic
AGCAACTTGCAATCTTCCTA+GGG 0.533847 6.4:-4193141 MS.gene66962:CDS
AAGAGGAGAGAAAACCAATT+GGG 0.538998 6.4:-4193195 MS.gene66962:CDS
CAAATCTTGAATCATGGGAA+TGG 0.541002 6.4:-4191933 MS.gene66962:CDS
GAGGGTACCTTTGCATCCCT+AGG 0.549703 6.4:+4193125 None:intergenic
TTTGTAGTGAAAGCTAAGAT+GGG 0.554108 6.4:-4193401 MS.gene66962:intron
GGAAAATAAAGAGTGCAAGA+TGG 0.554428 6.4:-4192118 MS.gene66962:CDS
CCATTTGATGATGAAGGTGA+TGG 0.556150 6.4:+4192342 None:intergenic
ATTATTCATACATGAATCAA+GGG 0.558255 6.4:-4192170 MS.gene66962:CDS
CCCATGATTCAAGATTTGAG+AGG 0.558765 6.4:+4191938 None:intergenic
AACATTGTATGAAGAACTTG+AGG 0.560044 6.4:-4191980 MS.gene66962:CDS
AAAGATAAAGAGATCTACAA+AGG 0.563281 6.4:-4193278 MS.gene66962:CDS
AAGATAAAGAGATCTACAAA+GGG 0.564009 6.4:-4193277 MS.gene66962:CDS
GGGTGAAATCTGAAACCAGC+AGG 0.566266 6.4:+4193708 None:intergenic
ATTGATGATCATGACTTCAA+AGG 0.574039 6.4:-4192372 MS.gene66962:CDS
CAATCTTCCTAGGGATGCAA+AGG 0.581965 6.4:-4193132 MS.gene66962:intron
TACTTACTTGGTAAATCCCA+AGG 0.598796 6.4:+4193585 None:intergenic
AAAGGAGGATCCACAAGAGG+TGG 0.605804 6.4:+4192408 None:intergenic
AATCAAGGGAATAATAGCAA+TGG 0.606407 6.4:-4192156 MS.gene66962:CDS
ATGGTATTGTTGCTAAAAGG+AGG 0.620808 6.4:+4192393 None:intergenic
AAACCAGCAGGCAAATCAAG+AGG 0.637474 6.4:+4193720 None:intergenic
CATGATTCAAGATTTGAGAG+GGG 0.641900 6.4:+4191940 None:intergenic
ACATTGTATGAAGAACTTGA+GGG 0.644551 6.4:-4191979 MS.gene66962:CDS
CTAAAAGGAGGATCCACAAG+AGG 0.668774 6.4:+4192405 None:intergenic
TATAAAGGTAGAGCTCCAAG+AGG 0.710079 6.4:-4193212 MS.gene66962:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAAGAAAAAAAAATTAAGA+GGG + chr6.4:4192570-4192589 None:intergenic 10.0%
!! AAAAGAAAATAATACTTACT+TGG + chr6.4:4192104-4192123 None:intergenic 15.0%
!! CAAAAGAAAAAAAAATTAAG+AGG + chr6.4:4192571-4192590 None:intergenic 15.0%
!! CAATATAAAAATTAATGCAA+AGG - chr6.4:4192651-4192670 MS.gene66962:intron 15.0%
!!! ATAAAAAGAACTCATAATTT+TGG + chr6.4:4192913-4192932 None:intergenic 15.0%
!!! ATTTTCTTTTGATTTAGAAA+AGG - chr6.4:4192596-4192615 MS.gene66962:intron 15.0%
!!! TTTTCTAAATCAAAAGAAAA+TGG + chr6.4:4192597-4192616 None:intergenic 15.0%
!! AATTATTCATACATGAATCA+AGG - chr6.4:4193503-4193522 MS.gene66962:intron 20.0%
!! ATTATTCATACATGAATCAA+GGG - chr6.4:4193504-4193523 MS.gene66962:intron 20.0%
!! TAATGATTTCATCATCATTA+GGG + chr6.4:4191989-4192008 None:intergenic 20.0%
!! TTGATATGATATATAATTGC+AGG - chr6.4:4193121-4193140 MS.gene66962:intron 20.0%
!!! ATTTTGTCGTAATTCTTAAT+TGG + chr6.4:4192855-4192874 None:intergenic 20.0%
!!! TACTTTTTATTTGCTTAAGA+AGG - chr6.4:4192007-4192026 MS.gene66962:CDS 20.0%
!!! TTCATTTTCCAATCTTTTAA+GGG - chr6.4:4193202-4193221 MS.gene66962:CDS 20.0%
! AAAACTCTTGTGTTCTATAA+AGG - chr6.4:4192447-4192466 MS.gene66962:CDS 25.0%
! AAAGATAAAGAGATCTACAA+AGG - chr6.4:4192396-4192415 MS.gene66962:CDS 25.0%
! AAGATAAAGAGATCTACAAA+GGG - chr6.4:4192397-4192416 MS.gene66962:CDS 25.0%
! AATAGCAATGGTTACATTTA+TGG - chr6.4:4193530-4193549 MS.gene66962:intron 25.0%
! AGTTTCAATTCAAGTACAAT+GGG + chr6.4:4192761-4192780 None:intergenic 25.0%
! ATATATAATTGCAGGATGAT+TGG - chr6.4:4193129-4193148 MS.gene66962:intron 25.0%
! CAATCATATATAACTAACTC+CGG + chr6.4:4192212-4192231 None:intergenic 25.0%
! GTAATGATTTCATCATCATT+AGG + chr6.4:4191990-4192009 None:intergenic 25.0%
! TATATAATTGCAGGATGATT+GGG - chr6.4:4193130-4193149 MS.gene66962:intron 25.0%
! TTCTTTCTTTCTTTCTTTCT+TGG - chr6.4:4193082-4193101 MS.gene66962:intron 25.0%
!! AGAAAGAAAGAAAAAGTGTA+AGG + chr6.4:4193074-4193093 None:intergenic 25.0%
!! ATTTCTTTTGTCAAAGAGAT+AGG - chr6.4:4192310-4192329 MS.gene66962:CDS 25.0%
!! CTTCATTTTCCAATCTTTTA+AGG - chr6.4:4193201-4193220 MS.gene66962:CDS 25.0%
!! TCTAATTCATCTAATTTGCA+AGG + chr6.4:4192718-4192737 None:intergenic 25.0%
!!! AAAGAACTCATAATTTTGGT+CGG + chr6.4:4192909-4192928 None:intergenic 25.0%
!!! AATTTTAGTGCAATTGCAAT+TGG - chr6.4:4192041-4192060 MS.gene66962:CDS 25.0%
!!! TTAATGCAAAGGTTTTATTG+TGG - chr6.4:4192662-4192681 MS.gene66962:intron 25.0%
AACATTGTATGAAGAACTTG+AGG - chr6.4:4193694-4193713 MS.gene66962:CDS 30.0%
AATCAAGGGAATAATAGCAA+TGG - chr6.4:4193518-4193537 MS.gene66962:intron 30.0%
AATGTGCTTCTTTGCATTAA+TGG + chr6.4:4193416-4193435 None:intergenic 30.0%
ACATTGTATGAAGAACTTGA+GGG - chr6.4:4193695-4193714 MS.gene66962:CDS 30.0%
ACTAATCTCACCAATTTCAA+TGG - chr6.4:4193389-4193408 MS.gene66962:CDS 30.0%
ATATGAGTTTCTTTCTCATG+TGG - chr6.4:4192989-4193008 MS.gene66962:intron 30.0%
ATGCATGAATTTAGATTGGA+TGG - chr6.4:4192504-4192523 MS.gene66962:CDS 30.0%
ATTATCCGGATAAAGAGTTA+TGG - chr6.4:4192182-4192201 MS.gene66962:CDS 30.0%
ATTCTCTACCAACAATTCTA+TGG - chr6.4:4193583-4193602 MS.gene66962:intron 30.0%
CAATGGTTACATTTATGGAT+TGG - chr6.4:4193535-4193554 MS.gene66962:intron 30.0%
CAGTTTCAATTCAAGTACAA+TGG + chr6.4:4192762-4192781 None:intergenic 30.0%
CTCAATAGGTGATGATTTAT+TGG - chr6.4:4193229-4193248 MS.gene66962:CDS 30.0%
GATAAAGAGTTATGGTAATC+CGG - chr6.4:4192190-4192209 MS.gene66962:CDS 30.0%
GATAACATGTTCTCATTCAA+GGG + chr6.4:4193482-4193501 None:intergenic 30.0%
GATTACCATAACTCTTTATC+CGG + chr6.4:4192190-4192209 None:intergenic 30.0%
TAACTCTTTATCCGGATAAT+CGG + chr6.4:4192182-4192201 None:intergenic 30.0%
TCAATGGTATTGTTGCTAAA+AGG + chr6.4:4193287-4193306 None:intergenic 30.0%
TCATTGTTCATTAAGTAGCT+TGG + chr6.4:4193368-4193387 None:intergenic 30.0%
TGAACTCTATAGAAAGCAAA+AGG + chr6.4:4193035-4193054 None:intergenic 30.0%
TGATAACATGTTCTCATTCA+AGG + chr6.4:4193483-4193502 None:intergenic 30.0%
TTTCAAAGCAAGAAATTGGA+AGG - chr6.4:4193666-4193685 MS.gene66962:CDS 30.0%
TTTGTAGTGAAAGCTAAGAT+GGG - chr6.4:4192273-4192292 MS.gene66962:CDS 30.0%
! ATTGATGATCATGACTTCAA+AGG - chr6.4:4193302-4193321 MS.gene66962:CDS 30.0%
! CATTAATGGACCATTGAAAT+TGG + chr6.4:4193402-4193421 None:intergenic 30.0%
! GTTGTTTCAAAGCAAGAAAT+TGG - chr6.4:4193662-4193681 MS.gene66962:CDS 30.0%
! TTTGAAGTCATGATCATCAA+TGG + chr6.4:4193303-4193322 None:intergenic 30.0%
! TTTTCTTCATACCAACAAGT+TGG + chr6.4:4192431-4192450 None:intergenic 30.0%
! TTTTGTAGTGAAAGCTAAGA+TGG - chr6.4:4192272-4192291 MS.gene66962:CDS 30.0%
!! AAGAACTCATAATTTTGGTC+GGG + chr6.4:4192908-4192927 None:intergenic 30.0%
!! CAATATCCATTTGATGATGA+AGG + chr6.4:4193341-4193360 None:intergenic 30.0%
!! TCACTTTTGTTCACAACAAT+AGG + chr6.4:4191930-4191949 None:intergenic 30.0%
AAATTCATGCATGACCCAAT+TGG + chr6.4:4192496-4192515 None:intergenic 35.0%
AAGAGGAGAGAAAACCAATT+GGG - chr6.4:4192479-4192498 MS.gene66962:CDS 35.0%
AATGCTCACCATAGAATTGT+TGG + chr6.4:4193594-4193613 None:intergenic 35.0%
AATTACAGTTGCAGTCGAAA+TGG + chr6.4:4192880-4192899 None:intergenic 35.0%
ACTAATAGAGCAACTGAATC+AGG - chr6.4:4192354-4192373 MS.gene66962:CDS 35.0%
AGAGATAGGAAATATCCAAC+TGG - chr6.4:4192324-4192343 MS.gene66962:CDS 35.0%
ATCTTAACTCTCCGATTATC+CGG - chr6.4:4192168-4192187 MS.gene66962:CDS 35.0%
ATGGTATTGTTGCTAAAAGG+AGG + chr6.4:4193284-4193303 None:intergenic 35.0%
CAAATCTTGAATCATGGGAA+TGG - chr6.4:4193741-4193760 MS.gene66962:CDS 35.0%
CATGATTCAAGATTTGAGAG+GGG + chr6.4:4193737-4193756 None:intergenic 35.0%
CCATGATTCAAGATTTGAGA+GGG + chr6.4:4193738-4193757 None:intergenic 35.0%
CCTCTCAAATCTTGAATCAT+GGG - chr6.4:4193736-4193755 MS.gene66962:CDS 35.0%
GGTCATGCATGAATTTAGAT+TGG - chr6.4:4192500-4192519 MS.gene66962:CDS 35.0%
TACTTACTTGGTAAATCCCA+AGG + chr6.4:4192092-4192111 None:intergenic 35.0%
TGAGTTCACCCTTAAAAGAT+TGG + chr6.4:4193213-4193232 None:intergenic 35.0%
! AAAGCAAAAGGTGTGATGAA+GGG + chr6.4:4193023-4193042 None:intergenic 35.0%
! CTATTAGTTCTTGTTCCAGT+TGG + chr6.4:4192342-4192361 None:intergenic 35.0%
! GGAAAATAAAGAGTGCAAGA+TGG - chr6.4:4193556-4193575 MS.gene66962:intron 35.0%
! GGAATTTGGATTTGAGTTTG+AGG + chr6.4:4193452-4193471 None:intergenic 35.0%
!! CTTTTAAGGGTGAACTCAAT+AGG - chr6.4:4193215-4193234 MS.gene66962:CDS 35.0%
!! TTGGTGAAGCTGATTTGAAT+AGG - chr6.4:4192060-4192079 MS.gene66962:CDS 35.0%
AGCAACTTGCAATCTTCCTA+GGG - chr6.4:4192533-4192552 MS.gene66962:CDS 40.0%
ATTTGAATAGGTGTGAGCCT+TGG - chr6.4:4192072-4192091 MS.gene66962:CDS 40.0%
CAAGAGGAGAGAAAACCAAT+TGG - chr6.4:4192478-4192497 MS.gene66962:CDS 40.0%
CCATCACCTTCATCATCAAA+TGG - chr6.4:4193332-4193351 MS.gene66962:CDS 40.0%
CCCATGATTCAAGATTTGAG+AGG + chr6.4:4193739-4193758 None:intergenic 40.0%
CCCTCTCAAATCTTGAATCA+TGG - chr6.4:4193735-4193754 MS.gene66962:CDS 40.0%
CTAAGATGGGAGAGAAAGAT+TGG - chr6.4:4192286-4192305 MS.gene66962:CDS 40.0%
GGGAAAAGTAACCAACTTGT+TGG - chr6.4:4192417-4192436 MS.gene66962:CDS 40.0%
TAGCAACTTGCAATCTTCCT+AGG - chr6.4:4192532-4192551 MS.gene66962:CDS 40.0%
TATAAAGGTAGAGCTCCAAG+AGG - chr6.4:4192462-4192481 MS.gene66962:CDS 40.0%
TTTGAATAGGTGTGAGCCTT+GGG - chr6.4:4192073-4192092 MS.gene66962:CDS 40.0%
! GAAAGCAAAAGGTGTGATGA+AGG + chr6.4:4193024-4193043 None:intergenic 40.0%
! TCAAGGGTGTGTTTGGAATT+TGG + chr6.4:4193466-4193485 None:intergenic 40.0%
! TTCTCATTCAAGGGTGTGTT+TGG + chr6.4:4193473-4193492 None:intergenic 40.0%
!! CCATTTGATGATGAAGGTGA+TGG + chr6.4:4193335-4193354 None:intergenic 40.0%
!!! CAATTGGTTTTCTCTCCTCT+TGG + chr6.4:4192480-4192499 None:intergenic 40.0%
AAACCAGCAGGCAAATCAAG+AGG + chr6.4:4191957-4191976 None:intergenic 45.0%
AAGGTGTGATGAAGGGAGAA+AGG + chr6.4:4193016-4193035 None:intergenic 45.0%
CAATCTTCCTAGGGATGCAA+AGG - chr6.4:4192542-4192561 MS.gene66962:intron 45.0%
CTAAAAGGAGGATCCACAAG+AGG + chr6.4:4193272-4193291 None:intergenic 45.0%
CTTGAGGGACCTTCATCAAT+TGG - chr6.4:4193710-4193729 MS.gene66962:CDS 45.0%
GAGCAACTGAATCAGGCTAT+TGG - chr6.4:4192361-4192380 MS.gene66962:CDS 45.0%
TCAGGCTATTGGAAAGCAAC+TGG - chr6.4:4192372-4192391 MS.gene66962:CDS 45.0%
TTCTTCACTTCCACCTCTTG+TGG - chr6.4:4193256-4193275 MS.gene66962:CDS 45.0%
! GGATGATTGGGTTGTGTCAA+AGG - chr6.4:4193142-4193161 MS.gene66962:CDS 45.0%
AAAGGAGGATCCACAAGAGG+TGG + chr6.4:4193269-4193288 None:intergenic 50.0%
GAGAGGGGACCAATTGATGA+AGG + chr6.4:4193722-4193741 None:intergenic 50.0%
! GGGTGAAATCTGAAACCAGC+AGG + chr6.4:4191969-4191988 None:intergenic 50.0%
!! GAACCTCTTGATTTGCCTGC+TGG - chr6.4:4191951-4191970 MS.gene66962:CDS 50.0%
!! GAGGGTACCTTTGCATCCCT+AGG + chr6.4:4192552-4192571 None:intergenic 55.0%


Chromosome Type Strat End Strand Name
chr6.4 gene 4191918 4193778 4191918 ID=MS.gene66962
chr6.4 mRNA 4191918 4193778 4191918 ID=MS.gene66962.t1;Parent=MS.gene66962
chr6.4 exon 4193592 4193778 4193592 ID=MS.gene66962.t1.exon1;Parent=MS.gene66962.t1
chr6.4 CDS 4193592 4193778 4193592 ID=cds.MS.gene66962.t1;Parent=MS.gene66962.t1
chr6.4 exon 4193133 4193416 4193133 ID=MS.gene66962.t1.exon2;Parent=MS.gene66962.t1
chr6.4 CDS 4193133 4193416 4193133 ID=cds.MS.gene66962.t1;Parent=MS.gene66962.t1
chr6.4 exon 4191918 4192553 4191918 ID=MS.gene66962.t1.exon3;Parent=MS.gene66962.t1
chr6.4 CDS 4191918 4192553 4191918 ID=cds.MS.gene66962.t1;Parent=MS.gene66962.t1
Gene Sequence

>MS.gene66962

ATGGAAGAACCTATTGTTGTGAACAAAAGTGATGAACCTCTTGATTTGCCTGCTGGTTTCAGATTTCACCCTAATGATGATGAAATCATTACTTTTTATTTGCTTAAGAAGGTATTGAATAGTAATTTTAGTGCAATTGCAATTGGTGAAGCTGATTTGAATAGGTGTGAGCCTTGGGATTTACCAAGTAAGTATTATTTTCTTTTTTAGTTTTCATTTGTTTATATGAAATTATGATTATTATGTTTTGATCTTAACTCTCCGATTATCCGGATAAAGAGTTATGGTAATCCGGAGTTAGTTATATATGATTGTTTGTTCATAATTTTTAACAATATGAATATGATTATGATATTTTGTAGTGAAAGCTAAGATGGGAGAGAAAGATTGGTATTTCTTTTGTCAAAGAGATAGGAAATATCCAACTGGAACAAGAACTAATAGAGCAACTGAATCAGGCTATTGGAAAGCAACTGGAAAAGATAAAGAGATCTACAAAGGGAAAAGTAACCAACTTGTTGGTATGAAGAAAACTCTTGTGTTCTATAAAGGTAGAGCTCCAAGAGGAGAGAAAACCAATTGGGTCATGCATGAATTTAGATTGGATGGAACATTAGCAACTTGCAATCTTCCTAGGGATGCAAAGGTACCCTCTTAATTTTTTTTTCTTTTGTTACCATTTTCTTTTGATTTAGAAAAGGAAATGATCAAGCTTTTAAATAGTTTATAATTTCAATATAAAAATTAATGCAAAGGTTTTATTGTGGTTAGTTCATTAGTCTAAAATGTTTAATCTTCCTTGCAAATTAGATGAATTAGAGAGACATTACTTGTGATCGACCCATTGTACTTGAATTGAAACTGATCGCAATTTTCGCTTCATCAGTTTTATTTATCTGCAATTTTTTAAAATATCGCGAATTACGACAAAATTCCAATTAAGAATTACGACAAAATTTCCATTTCGACTGCAACTGTAATTTAAAACCCGACCAAAATTATGAGTTCTTTTTATCTAAATTTTGCTATAATTTTGTTTATGCTTTTTTATAAAGTGACTTTTGTGATGTTATATGAGTTTCTTTCTCATGTGGTCCTTTCTCCCTTCATCACACCTTTTGCTTTCTATAGAGTTCAATTGTCAAAGATTCTACCTTACACTTTTTCTTTCTTTCTTTCTTTCTTTCTTGGAAATGCATGATATTGATATGATATATAATTGCAGGATGATTGGGTTGTGTCAAAGGTTTTCATCAAGAACAACATTGAAGTTAAAAAAACTACTTCATTTTCCAATCTTTTAAGGGTGAACTCAATAGGTGATGATTTATTGGATTTTTCTTCACTTCCACCTCTTGTGGATCCTCCTTTTAGCAACAATACCATTGATGATCATGACTTCAAAGGAATCAATCCATCACCTTCATCATCAAATGGATATTGTTTTCCAAGCTACTTAATGAACAATGAAACTAATCTCACCAATTTCAATGGTCCATTAATGCAAAGAAGCACATTTTCATCACATCAACCTCAAACTCAAATCCAAATTCCAAACACACCCTTGAATGAGAACATGTTATCAAATTATTCATACATGAATCAAGGGAATAATAGCAATGGTTACATTTATGGATTGGAAAATAAAGAGTGCAAGATGGAGCAATTCTCTACCAACAATTCTATGGTGAGCATTTCACAAGACACATGTTTGAGCAATGACATAAACAATGAGACATCATCTGTTGTTTCAAAGCAAGAAATTGGAAGGAATGCAACATTGTATGAAGAACTTGAGGGACCTTCATCAATTGGTCCCCTCTCAAATCTTGAATCATGGGAATGGCTATTGAAGAGTTAA

Protein sequence

>MS.gene66962.t1

MEEPIVVNKSDEPLDLPAGFRFHPNDDEIITFYLLKKVLNSNFSAIAIGEADLNRCEPWDLPMKAKMGEKDWYFFCQRDRKYPTGTRTNRATESGYWKATGKDKEIYKGKSNQLVGMKKTLVFYKGRAPRGEKTNWVMHEFRLDGTLATCNLPRDAKDDWVVSKVFIKNNIEVKKTTSFSNLLRVNSIGDDLLDFSSLPPLVDPPFSNNTIDDHDFKGINPSPSSSNGYCFPSYLMNNETNLTNFNGPLMQRSTFSSHQPQTQIQIPNTPLNENMLSNYSYMNQGNNSNGYIYGLENKECKMEQFSTNNSMVSISQDTCLSNDINNETSSVVSKQEIGRNATLYEELEGPSSIGPLSNLESWEWLLKS