Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034660.t1 | XP_013467777.1 | 96.9 | 419 | 12 | 1 | 1 | 418 | 1 | 419 | 3.30E-235 | 823.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034660.t1 | Q5IH14 | 70.0 | 414 | 119 | 2 | 1 | 410 | 1 | 413 | 3.5e-169 | 595.9 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034660.t1 | Q9FQ10 | 96.9 | 419 | 12 | 1 | 1 | 418 | 1 | 419 | 2.4e-235 | 823.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene46507 | MS.gene034660 | PPI |
| MS.gene034660 | MS.gene46507 | PPI |
| MS.gene034660 | MS.gene39234 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034660.t1 | MTR_1g054980 | 96.897 | 419 | 12 | 1 | 1 | 418 | 1 | 419 | 0.0 | 835 |
| MS.gene034660.t1 | MTR_1g040560 | 60.941 | 425 | 157 | 3 | 1 | 418 | 1 | 423 | 0.0 | 536 |
| MS.gene034660.t1 | MTR_1g040560 | 53.922 | 306 | 132 | 3 | 120 | 418 | 12 | 315 | 2.08e-115 | 340 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene034660.t1 | AT2G35840 | 69.267 | 423 | 124 | 3 | 1 | 418 | 1 | 422 | 0.0 | 602 |
| MS.gene034660.t1 | AT2G35840 | 69.267 | 423 | 124 | 3 | 1 | 418 | 1 | 422 | 0.0 | 602 |
| MS.gene034660.t1 | AT2G35840 | 69.267 | 423 | 124 | 3 | 1 | 418 | 1 | 422 | 0.0 | 602 |
| MS.gene034660.t1 | AT2G35840 | 69.267 | 423 | 124 | 3 | 1 | 418 | 1 | 422 | 0.0 | 602 |
| MS.gene034660.t1 | AT1G51420 | 62.972 | 424 | 150 | 4 | 1 | 418 | 2 | 424 | 0.0 | 531 |
| MS.gene034660.t1 | AT1G51420 | 62.972 | 424 | 150 | 4 | 1 | 418 | 2 | 424 | 0.0 | 531 |
| MS.gene034660.t1 | AT1G51420 | 62.972 | 424 | 150 | 4 | 1 | 418 | 1 | 423 | 0.0 | 531 |
| MS.gene034660.t1 | AT1G51420 | 62.972 | 424 | 150 | 4 | 1 | 418 | 2 | 424 | 0.0 | 531 |
| MS.gene034660.t1 | AT3G52340 | 58.354 | 413 | 170 | 2 | 1 | 412 | 1 | 412 | 1.11e-174 | 494 |
| MS.gene034660.t1 | AT3G52340 | 58.354 | 413 | 170 | 2 | 1 | 412 | 1 | 412 | 1.11e-174 | 494 |
| MS.gene034660.t1 | AT3G52340 | 58.354 | 413 | 170 | 2 | 1 | 412 | 1 | 412 | 1.11e-174 | 494 |
| MS.gene034660.t1 | AT3G52340 | 58.354 | 413 | 170 | 2 | 1 | 412 | 1 | 412 | 1.11e-174 | 494 |
| MS.gene034660.t1 | AT3G52340 | 58.354 | 413 | 170 | 2 | 1 | 412 | 13 | 424 | 1.17e-174 | 495 |
| MS.gene034660.t1 | AT3G52340 | 58.354 | 413 | 170 | 2 | 1 | 412 | 13 | 424 | 1.17e-174 | 495 |
| MS.gene034660.t1 | AT3G52340 | 58.354 | 413 | 170 | 2 | 1 | 412 | 42 | 453 | 2.71e-174 | 495 |
| MS.gene034660.t1 | AT3G54270 | 54.327 | 416 | 185 | 3 | 1 | 412 | 1 | 415 | 1.93e-166 | 474 |
Find 108 sgRNAs with CRISPR-Local
Find 248 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAATGTCCTTGTCCCATTTC+TGG | 0.095011 | 1.4:-45944790 | None:intergenic |
| GCCTCAGAGCGCTGTGCATC+TGG | 0.152598 | 1.4:+45945659 | MS.gene034660:CDS |
| AGAGGCTCTTTCTAAGATTT+TGG | 0.167196 | 1.4:+45945090 | MS.gene034660:CDS |
| TTCAGCATTCCAGGAGTTTA+TGG | 0.202008 | 1.4:+45945431 | MS.gene034660:CDS |
| TCTGAGGCATGCAGAATCTT+AGG | 0.238626 | 1.4:-45945644 | None:intergenic |
| GAATAGCTCGGCATCATTTC+CGG | 0.265204 | 1.4:-45945411 | None:intergenic |
| CACAGATAAGTTCGGATATA+TGG | 0.284176 | 1.4:+45946852 | MS.gene034660:CDS |
| CATCTCTTGGGGACAGGTTT+GGG | 0.285854 | 1.4:-45945715 | None:intergenic |
| TACTCATACCTTTCTTAGTA+TGG | 0.291521 | 1.4:-45947017 | None:intergenic |
| GGCTGGTGAAGTTTGATAAA+TGG | 0.304367 | 1.4:+45946873 | MS.gene034660:CDS |
| ACATCTCTTGGGGACAGGTT+TGG | 0.339450 | 1.4:-45945716 | None:intergenic |
| TTCAAGAATTGAACCAGAAA+TGG | 0.339783 | 1.4:+45944777 | MS.gene034660:CDS |
| ATATCGCCACGATTCTTTGC+TGG | 0.357504 | 1.4:+45944616 | MS.gene034660:CDS |
| GTGGGAACTGAGATTACTTA+TGG | 0.363501 | 1.4:+45944725 | MS.gene034660:CDS |
| TGGTGCTGACCATTCTCTTA+AGG | 0.366778 | 1.4:+45946748 | MS.gene034660:CDS |
| AGGGGAAACAGTTTAGGATA+TGG | 0.373276 | 1.4:+45946810 | MS.gene034660:CDS |
| ACAGACATGATGGTTATATC+TGG | 0.375892 | 1.4:-45944704 | None:intergenic |
| ACAAACAGGGGAAACAGTTT+AGG | 0.376401 | 1.4:+45946804 | MS.gene034660:CDS |
| GCTGTTTATTGCTGCTATAA+AGG | 0.379309 | 1.4:+45945850 | MS.gene034660:CDS |
| GTTATATCTGGAGTTATCAT+AGG | 0.393312 | 1.4:-45944692 | None:intergenic |
| TTTGAGGTTCAATGCCCTTT+GGG | 0.393753 | 1.4:+45944586 | MS.gene034660:CDS |
| GCCGAGCTATTCAGCATTCC+AGG | 0.396491 | 1.4:+45945422 | MS.gene034660:CDS |
| AAAGGTGTATGGTAACAAAC+AGG | 0.400977 | 1.4:+45946790 | MS.gene034660:CDS |
| CTCAGTTGTTTATAGAGTAA+AGG | 0.417968 | 1.4:-45944659 | None:intergenic |
| CAATGTCTGAAACATCTCTT+GGG | 0.420133 | 1.4:-45945727 | None:intergenic |
| CCAATGTCTGAAACATCTCT+TGG | 0.421240 | 1.4:-45945728 | None:intergenic |
| GCCACTGCAGTAATTCCTCT+TGG | 0.422000 | 1.4:-45945598 | None:intergenic |
| GGTGTGTATATCCACCCTTC+TGG | 0.427354 | 1.4:+45946728 | MS.gene034660:CDS |
| TTTAATATGCAGGATCCATC+TGG | 0.447565 | 1.4:+45946707 | MS.gene034660:intron |
| TTTGTCTGTTAAGTGAAAAG+TGG | 0.454824 | 1.4:+45945801 | MS.gene034660:CDS |
| GCTGGTGAAGTTTGATAAAT+GGG | 0.455050 | 1.4:+45946874 | MS.gene034660:CDS |
| TTATATACTCCTTAAGAGAA+TGG | 0.455416 | 1.4:-45946757 | None:intergenic |
| AAATCGATGGTTCCCGATGA+TGG | 0.472518 | 1.4:+45944749 | MS.gene034660:CDS |
| AGTACCTGAGGCTTAAGTTC+AGG | 0.473435 | 1.4:-45944836 | None:intergenic |
| GCAGGCAGAAACAGAACAAC+GGG | 0.475371 | 1.4:+45945018 | MS.gene034660:intron |
| CTGAAACATCTCTTGGGGAC+AGG | 0.480413 | 1.4:-45945721 | None:intergenic |
| TCCAGGAGTTTATGGTGTCA+TGG | 0.483135 | 1.4:+45945439 | MS.gene034660:CDS |
| CGATGGTTCCCGATGATGGA+TGG | 0.484939 | 1.4:+45944753 | MS.gene034660:CDS |
| CCTCAGAGCGCTGTGCATCT+GGG | 0.486786 | 1.4:+45945660 | MS.gene034660:CDS |
| CAAAGAATCGTGGCGATATG+AGG | 0.489310 | 1.4:-45944612 | None:intergenic |
| CCACTGCAGTAATTCCTCTT+GGG | 0.490113 | 1.4:-45945597 | None:intergenic |
| CCAAGAGATGTTTCAGACAT+TGG | 0.490731 | 1.4:+45945728 | MS.gene034660:CDS |
| GTTTCCTGAACTTAAGCCTC+AGG | 0.490979 | 1.4:+45944832 | MS.gene034660:CDS |
| TCAAGAATTGAACCAGAAAT+GGG | 0.492584 | 1.4:+45944778 | MS.gene034660:CDS |
| CTGAGGCATGCAGAATCTTA+GGG | 0.499882 | 1.4:-45945643 | None:intergenic |
| ACCATGACACCATAAACTCC+TGG | 0.503899 | 1.4:-45945440 | None:intergenic |
| GCCCAAGTTAAAATGACCTA+TGG | 0.506142 | 1.4:-45945693 | None:intergenic |
| CTCAGTTCCCACAGACATGA+TGG | 0.515217 | 1.4:-45944714 | None:intergenic |
| AGGATTCCGATTGGTTCACC+TGG | 0.515792 | 1.4:+45947832 | MS.gene034660:intron |
| TTCTTGAACCCATCCATCAT+CGG | 0.519768 | 1.4:-45944762 | None:intergenic |
| TCTTGAACCCATCCATCATC+GGG | 0.522162 | 1.4:-45944761 | None:intergenic |
| GAAACAGTTTAGGATATGGT+TGG | 0.522204 | 1.4:+45946814 | MS.gene034660:CDS |
| TGTCACTACCATACTAAGAA+AGG | 0.533747 | 1.4:+45947009 | MS.gene034660:CDS |
| GATATATTACCACAAGGTGC+TGG | 0.536423 | 1.4:+45945305 | MS.gene034660:CDS |
| TACCATTGTGTGATCGAGAT+CGG | 0.537477 | 1.4:-45944312 | None:intergenic |
| GTTGGCTACACAGATAAGTT+CGG | 0.538393 | 1.4:+45946844 | MS.gene034660:CDS |
| CAGATTGTTCCAACCATGAC+TGG | 0.550666 | 1.4:-45947866 | None:intergenic |
| ATGCATCCAGGTGAACCAAT+CGG | 0.552499 | 1.4:-45947838 | None:intergenic |
| ACGTGCAGAAGTTGAGAACT+CGG | 0.555017 | 1.4:+45945826 | MS.gene034660:CDS |
| TCCTGGAATGCTGAATAGCT+CGG | 0.559117 | 1.4:-45945423 | None:intergenic |
| GCGATATGAGGCTTCCCAAA+GGG | 0.561720 | 1.4:-45944600 | None:intergenic |
| AGATATAACCATCATGTCTG+TGG | 0.566248 | 1.4:+45944706 | MS.gene034660:CDS |
| GATAAGTTCGGATATATGGC+TGG | 0.566741 | 1.4:+45946856 | MS.gene034660:CDS |
| ATTACCAGGTAGCTTTCCCT+CGG | 0.568172 | 1.4:-45945369 | None:intergenic |
| CTGTCTATATTATCCACTCA+TGG | 0.568570 | 1.4:-45947890 | None:intergenic |
| GAGACCGAGGGAAAGCTACC+TGG | 0.568897 | 1.4:+45945365 | MS.gene034660:CDS |
| GATGGTTCCCGATGATGGAT+GGG | 0.569266 | 1.4:+45944754 | MS.gene034660:CDS |
| CCACATACTAGAGTATTACC+AGG | 0.571550 | 1.4:-45945383 | None:intergenic |
| TTGGGTTTCAGGATTCCGAT+TGG | 0.574395 | 1.4:+45947823 | MS.gene034660:intron |
| ACTCTAGTATGTGGTGACTC+CGG | 0.576428 | 1.4:+45945392 | MS.gene034660:CDS |
| GATATAACCATCATGTCTGT+GGG | 0.578577 | 1.4:+45944707 | MS.gene034660:CDS |
| AGAGAATGGTCAGCACCAGA+AGG | 0.588947 | 1.4:-45946743 | None:intergenic |
| GGACAAGGACATTGTCATTG+AGG | 0.590293 | 1.4:+45944799 | MS.gene034660:CDS |
| GGATGCATGTGCACCAGTCA+TGG | 0.590310 | 1.4:+45947853 | MS.gene034660:CDS |
| GATTACTTATGGAAAATCGA+TGG | 0.601557 | 1.4:+45944736 | MS.gene034660:CDS |
| TTACCACAAGGTGCTGGCAA+AGG | 0.605101 | 1.4:+45945311 | MS.gene034660:CDS |
| GATATGGTTGGACAATGTGT+TGG | 0.606614 | 1.4:+45946826 | MS.gene034660:CDS |
| TGACCTTTGCCAGCACCTTG+TGG | 0.606824 | 1.4:-45945314 | None:intergenic |
| CCTGGTAATACTCTAGTATG+TGG | 0.607257 | 1.4:+45945383 | MS.gene034660:CDS |
| GCGAGCTATTCTCTGTGTCA+TGG | 0.610204 | 1.4:-45944562 | None:intergenic |
| GATGTTAAAATAATATATAG+CGG | 0.612438 | 1.4:+45945269 | MS.gene034660:CDS |
| GCATGTGCACCAGTCATGGT+TGG | 0.613768 | 1.4:+45947857 | MS.gene034660:CDS |
| GGGTGGATATACACACCAGA+TGG | 0.615271 | 1.4:-45946722 | None:intergenic |
| TCTGGGATTATACAAGCCAT+AGG | 0.615679 | 1.4:+45945677 | MS.gene034660:CDS |
| TGGAACAATCTGACCATGAG+TGG | 0.618034 | 1.4:+45947877 | MS.gene034660:CDS |
| GGCGATATGAGGCTTCCCAA+AGG | 0.620433 | 1.4:-45944601 | None:intergenic |
| TGACTGGTGCACATGCATCC+AGG | 0.624058 | 1.4:-45947850 | None:intergenic |
| AATGGTCAGCACCAGAAGGG+TGG | 0.627460 | 1.4:-45946739 | None:intergenic |
| GCCAACTTGCAGATGAAGAG+CGG | 0.631632 | 1.4:+45946975 | MS.gene034660:intron |
| GAGAATGGTCAGCACCAGAA+GGG | 0.632538 | 1.4:-45946742 | None:intergenic |
| ATATAGCGGAGGAGTTGACA+TGG | 0.640245 | 1.4:+45945283 | MS.gene034660:CDS |
| CCCAGATGCACAGCGCTCTG+AGG | 0.646146 | 1.4:-45945660 | None:intergenic |
| TTTGATAAATGGGAGTTACA+CGG | 0.646192 | 1.4:+45946884 | MS.gene034660:CDS |
| CAATGCTAAGCAAGTGACAG+AGG | 0.647164 | 1.4:+45945072 | MS.gene034660:CDS |
| CTTGCAGATGAAGAGCGGCA+TGG | 0.655839 | 1.4:+45946980 | MS.gene034660:intron |
| GTTAAAATAATATATAGCGG+AGG | 0.662156 | 1.4:+45945272 | MS.gene034660:CDS |
| AGGTGTATGGTAACAAACAG+GGG | 0.662925 | 1.4:+45946792 | MS.gene034660:CDS |
| TTCCGATCTCGATCACACAA+TGG | 0.663470 | 1.4:+45944310 | MS.gene034660:CDS |
| GTAGGTAAGCAACGCCCAAG+AGG | 0.666196 | 1.4:+45945583 | MS.gene034660:intron |
| CCCAAGAGGAATTACTGCAG+TGG | 0.669784 | 1.4:+45945597 | MS.gene034660:CDS |
| AGAAAACCAGCAAAGAATCG+TGG | 0.672395 | 1.4:-45944622 | None:intergenic |
| TGCAGGCAGAAACAGAACAA+CGG | 0.681696 | 1.4:+45945017 | MS.gene034660:intron |
| CTTTACTCTATAAACAACTG+AGG | 0.684288 | 1.4:+45944660 | MS.gene034660:CDS |
| AAGGTGTATGGTAACAAACA+GGG | 0.688423 | 1.4:+45946791 | MS.gene034660:CDS |
| AATGTCTGAAACATCTCTTG+GGG | 0.696343 | 1.4:-45945726 | None:intergenic |
| ATTGAACCAGAAATGGGACA+AGG | 0.722798 | 1.4:+45944784 | MS.gene034660:CDS |
| GACATGGATATATTACCACA+AGG | 0.735098 | 1.4:+45945299 | MS.gene034660:CDS |
| ATAGACTCAAATCTTCTGCG+CGG | 0.750289 | 1.4:+45944276 | MS.gene034660:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAAATACTGAAAATA+TGG | - | chr1.4:45945489-45945508 | None:intergenic | 10.0% |
| !! | GATGTTAAAATAATATATAG+CGG | + | chr1.4:45945269-45945288 | MS.gene034660:CDS | 15.0% |
| !! | TTAAAAGACTTAAATTTCAT+AGG | - | chr1.4:45947485-45947504 | None:intergenic | 15.0% |
| !!! | ATCATTAGTTATTTTTTATG+TGG | + | chr1.4:45946418-45946437 | MS.gene034660:intron | 15.0% |
| !!! | GTATATAAATATTTTGAGAA+AGG | + | chr1.4:45946772-45946791 | MS.gene034660:CDS | 15.0% |
| !!! | TAGATTATTAGTCTAAAATT+GGG | + | chr1.4:45945524-45945543 | MS.gene034660:intron | 15.0% |
| !!! | TTAGATTATTAGTCTAAAAT+TGG | + | chr1.4:45945523-45945542 | MS.gene034660:intron | 15.0% |
| !! | AAAAAAAAAATGCACCAAAA+AGG | - | chr1.4:45945994-45946013 | None:intergenic | 20.0% |
| !! | AAAAATACTGAAAATATGGT+TGG | - | chr1.4:45945485-45945504 | None:intergenic | 20.0% |
| !! | CAAAAAATTACACAATGTTA+TGG | - | chr1.4:45945242-45945261 | None:intergenic | 20.0% |
| !! | CTAATATATCTATGAAATGT+AGG | - | chr1.4:45947566-45947585 | None:intergenic | 20.0% |
| !! | TCAATATATGTTTATCACTA+GGG | + | chr1.4:45947377-45947396 | MS.gene034660:intron | 20.0% |
| !! | TGCTAATAAGAATGAAATTT+GGG | + | chr1.4:45947805-45947824 | MS.gene034660:intron | 20.0% |
| !! | TTCAATATATGTTTATCACT+AGG | + | chr1.4:45947376-45947395 | MS.gene034660:intron | 20.0% |
| !! | TTGCTAATAAGAATGAAATT+TGG | + | chr1.4:45947804-45947823 | MS.gene034660:intron | 20.0% |
| !!! | ACTATTTTGTTTTAATATGC+AGG | + | chr1.4:45946697-45946716 | MS.gene034660:intron | 20.0% |
| !!! | ATATTATTTTAACATCCAAC+TGG | - | chr1.4:45945265-45945284 | None:intergenic | 20.0% |
| !!! | ATTTTCACTATATTTTTACG+CGG | + | chr1.4:45947771-45947790 | MS.gene034660:intron | 20.0% |
| !!! | GTAATGCATAAGTATTTTTA+TGG | + | chr1.4:45947037-45947056 | MS.gene034660:intron | 20.0% |
| !!! | TGATGAATATTATCTTGTTT+TGG | + | chr1.4:45946338-45946357 | MS.gene034660:intron | 20.0% |
| !!! | TGATTCATATTTTGAATGAT+CGG | + | chr1.4:45944991-45945010 | MS.gene034660:intron | 20.0% |
| !!! | TGCTTTAGTAAAAAGAATTT+TGG | - | chr1.4:45945969-45945988 | None:intergenic | 20.0% |
| !!! | TTTGGTAATATTTTCTACTT+TGG | + | chr1.4:45946301-45946320 | MS.gene034660:intron | 20.0% |
| ! | ATGCATAAAGAACATACAAT+AGG | - | chr1.4:45945916-45945935 | None:intergenic | 25.0% |
| ! | CGAGAAAAACATAATACTAA+TGG | - | chr1.4:45944368-45944387 | None:intergenic | 25.0% |
| ! | GAAATCATTTCTGAGTAAAA+TGG | - | chr1.4:45945149-45945168 | None:intergenic | 25.0% |
| ! | GGTAAATCTGAAAAAATAAC+TGG | + | chr1.4:45947249-45947268 | MS.gene034660:intron | 25.0% |
| ! | GTGAAAATGCAAATTAGTAA+CGG | - | chr1.4:45947759-45947778 | None:intergenic | 25.0% |
| ! | GTTAAAATAATATATAGCGG+AGG | + | chr1.4:45945272-45945291 | MS.gene034660:CDS | 25.0% |
| ! | GTTCAACCATTATAACAATT+CGG | + | chr1.4:45946515-45946534 | MS.gene034660:intron | 25.0% |
| ! | TCTATTCCGAATTGTTATAA+TGG | - | chr1.4:45946524-45946543 | None:intergenic | 25.0% |
| ! | TGACAAATTTATCCCTTAAA+TGG | + | chr1.4:45947540-45947559 | MS.gene034660:intron | 25.0% |
| ! | TTATATACTCCTTAAGAGAA+TGG | - | chr1.4:45946760-45946779 | None:intergenic | 25.0% |
| !! | ATGCATCTAAAGTTAAATCA+AGG | - | chr1.4:45946269-45946288 | None:intergenic | 25.0% |
| !! | ATTATTAGTTTGAGCAACAA+TGG | + | chr1.4:45944952-45944971 | MS.gene034660:intron | 25.0% |
| !! | TGATTTAACTTTAGATGCAT+TGG | + | chr1.4:45946269-45946288 | MS.gene034660:intron | 25.0% |
| !! | TTTTTATCTATATCTTCCGA+AGG | + | chr1.4:45946096-45946115 | MS.gene034660:intron | 25.0% |
| !!! | AATATTTTGAGAAAGGTGTA+TGG | + | chr1.4:45946779-45946798 | MS.gene034660:CDS | 25.0% |
| !!! | CTCAAACTTTTTAAGCAAAT+AGG | - | chr1.4:45945348-45945367 | None:intergenic | 25.0% |
| !!! | GGTTTTTAAGAAAACAATGA+AGG | - | chr1.4:45947169-45947188 | None:intergenic | 25.0% |
| !!! | TATTATCTTGTTTTGGCAAT+TGG | + | chr1.4:45946345-45946364 | MS.gene034660:intron | 25.0% |
| !!! | TTTACTAAAGCATTCCTTTT+TGG | + | chr1.4:45945977-45945996 | MS.gene034660:intron | 25.0% |
| !!! | TTTTTCATTTTCGAGTTTCA+TGG | + | chr1.4:45946010-45946029 | MS.gene034660:intron | 25.0% |
| AAATCAAACGGGAAAAAACA+CGG | + | chr1.4:45947208-45947227 | MS.gene034660:intron | 30.0% | |
| AAATTCTGAGTATACCAAAC+AGG | + | chr1.4:45946039-45946058 | MS.gene034660:intron | 30.0% | |
| AAGTTCGAGAGATATAAAAG+AGG | - | chr1.4:45946955-45946974 | None:intergenic | 30.0% | |
| AGTTCGAGAGATATAAAAGA+GGG | - | chr1.4:45946954-45946973 | None:intergenic | 30.0% | |
| ATAGGCAATCTGTAAAAGTA+AGG | - | chr1.4:45945898-45945917 | None:intergenic | 30.0% | |
| ATGAAATGTAGGCCATTTAA+GGG | - | chr1.4:45947555-45947574 | None:intergenic | 30.0% | |
| ATGTAAAAACTGCACAAATG+CGG | - | chr1.4:45946245-45946264 | None:intergenic | 30.0% | |
| CAAATCATGTGTATATACGT+TGG | + | chr1.4:45945172-45945191 | MS.gene034660:intron | 30.0% | |
| CTCAGTTGTTTATAGAGTAA+AGG | - | chr1.4:45944662-45944681 | None:intergenic | 30.0% | |
| CTTTACTCTATAAACAACTG+AGG | + | chr1.4:45944660-45944679 | MS.gene034660:CDS | 30.0% | |
| GATTACTTATGGAAAATCGA+TGG | + | chr1.4:45944736-45944755 | MS.gene034660:CDS | 30.0% | |
| GTGATCAAGAAAAGAGATTA+TGG | - | chr1.4:45946621-45946640 | None:intergenic | 30.0% | |
| TAACGACAAAAATTGACAGA+GGG | + | chr1.4:45947662-45947681 | MS.gene034660:intron | 30.0% | |
| TACTCATACCTTTCTTAGTA+TGG | - | chr1.4:45947020-45947039 | None:intergenic | 30.0% | |
| TAGGCAATCTGTAAAAGTAA+GGG | - | chr1.4:45945897-45945916 | None:intergenic | 30.0% | |
| TATGAAATGTAGGCCATTTA+AGG | - | chr1.4:45947556-45947575 | None:intergenic | 30.0% | |
| TATGGAGTGAATAAGCAAAT+TGG | + | chr1.4:45947055-45947074 | MS.gene034660:intron | 30.0% | |
| TCAAGAATTGAACCAGAAAT+GGG | + | chr1.4:45944778-45944797 | MS.gene034660:CDS | 30.0% | |
| TTAACGACAAAAATTGACAG+AGG | + | chr1.4:45947661-45947680 | MS.gene034660:intron | 30.0% | |
| TTCAAGAATTGAACCAGAAA+TGG | + | chr1.4:45944777-45944796 | MS.gene034660:CDS | 30.0% | |
| TTTCCGTTTGGTAAAAATGA+GGG | + | chr1.4:45947723-45947742 | MS.gene034660:intron | 30.0% | |
| TTTGATAAATGGGAGTTACA+CGG | + | chr1.4:45946884-45946903 | MS.gene034660:CDS | 30.0% | |
| TTTGTCTGTTAAGTGAAAAG+TGG | + | chr1.4:45945801-45945820 | MS.gene034660:CDS | 30.0% | |
| ! | AAGAATGAAATTTGGGTTTC+AGG | + | chr1.4:45947812-45947831 | MS.gene034660:intron | 30.0% |
| ! | AGGGTTATCTTTTGCATTTT+CGG | - | chr1.4:45945627-45945646 | None:intergenic | 30.0% |
| ! | CTGTCAATTTTTGTCGTTAA+AGG | - | chr1.4:45947661-45947680 | None:intergenic | 30.0% |
| ! | GTTATATCTGGAGTTATCAT+AGG | - | chr1.4:45944695-45944714 | None:intergenic | 30.0% |
| ! | TCTGTTGATGAAAGATATTC+TGG | - | chr1.4:45946387-45946406 | None:intergenic | 30.0% |
| ! | TTATTGTTTTCTGTGAACCA+TGG | + | chr1.4:45944889-45944908 | MS.gene034660:intron | 30.0% |
| ! | TTTTCCGTTTGGTAAAAATG+AGG | + | chr1.4:45947722-45947741 | MS.gene034660:intron | 30.0% |
| !! | AACTTGCTAAAGCTTAATCA+AGG | - | chr1.4:45946147-45946166 | None:intergenic | 30.0% |
| !! | CAAGTTCTGAGTTTACAAAA+AGG | + | chr1.4:45946161-45946180 | MS.gene034660:intron | 30.0% |
| !! | TTGCTTTTCAATTTCCTGTT+TGG | - | chr1.4:45946056-45946075 | None:intergenic | 30.0% |
| !!! | TTGTGTAATTTTTTGCCAGT+TGG | + | chr1.4:45945247-45945266 | MS.gene034660:intron | 30.0% |
| AACTCTTGCATAAAGACTCA+TGG | - | chr1.4:45946656-45946675 | None:intergenic | 35.0% | |
| AAGGGATATCAATCATACAG+TGG | - | chr1.4:45945879-45945898 | None:intergenic | 35.0% | |
| AAGGTGTATGGTAACAAACA+GGG | + | chr1.4:45946791-45946810 | MS.gene034660:CDS | 35.0% | |
| ACAGACATGATGGTTATATC+TGG | - | chr1.4:45944707-45944726 | None:intergenic | 35.0% | |
| AGATATAACCATCATGTCTG+TGG | + | chr1.4:45944706-45944725 | MS.gene034660:CDS | 35.0% | |
| ATATCAACCGTTCAAATCAC+AGG | - | chr1.4:45944520-45944539 | None:intergenic | 35.0% | |
| ATGCAAAAACTGCACAAATG+AGG | - | chr1.4:45946123-45946142 | None:intergenic | 35.0% | |
| ATTCGGAATAGACATTTCCA+TGG | + | chr1.4:45946532-45946551 | MS.gene034660:intron | 35.0% | |
| CACAGATAAGTTCGGATATA+TGG | + | chr1.4:45946852-45946871 | MS.gene034660:CDS | 35.0% | |
| GACATGGATATATTACCACA+AGG | + | chr1.4:45945299-45945318 | MS.gene034660:CDS | 35.0% | |
| GATATAACCATCATGTCTGT+GGG | + | chr1.4:45944707-45944726 | MS.gene034660:CDS | 35.0% | |
| GCTGGTGAAGTTTGATAAAT+GGG | + | chr1.4:45946874-45946893 | MS.gene034660:CDS | 35.0% | |
| GCTGTTTATTGCTGCTATAA+AGG | + | chr1.4:45945850-45945869 | MS.gene034660:CDS | 35.0% | |
| GGTATTCACTGTGATTTGAT+TGG | + | chr1.4:45944866-45944885 | MS.gene034660:intron | 35.0% | |
| GTTCGAGAGATATAAAAGAG+GGG | - | chr1.4:45946953-45946972 | None:intergenic | 35.0% | |
| TAGTGAACCTGTGATTTGAA+CGG | + | chr1.4:45944510-45944529 | MS.gene034660:intron | 35.0% | |
| TCAAGAAAAGAGATTATGGC+AGG | - | chr1.4:45946617-45946636 | None:intergenic | 35.0% | |
| TCCGGATTTACCAAATCAAA+CGG | + | chr1.4:45947196-45947215 | MS.gene034660:intron | 35.0% | |
| TGTCACTACCATACTAAGAA+AGG | + | chr1.4:45947009-45947028 | MS.gene034660:CDS | 35.0% | |
| TTCGAGAGATATAAAAGAGG+GGG | - | chr1.4:45946952-45946971 | None:intergenic | 35.0% | |
| TTCGGAATAGACATTTCCAT+GGG | + | chr1.4:45946533-45946552 | MS.gene034660:intron | 35.0% | |
| TTTAATATGCAGGATCCATC+TGG | + | chr1.4:45946707-45946726 | MS.gene034660:intron | 35.0% | |
| ! | AAACACGGCTTTTCTAATGT+TGG | + | chr1.4:45947223-45947242 | MS.gene034660:intron | 35.0% |
| ! | AAAGGTGTATGGTAACAAAC+AGG | + | chr1.4:45946790-45946809 | MS.gene034660:CDS | 35.0% |
| ! | AATGTCTGAAACATCTCTTG+GGG | - | chr1.4:45945729-45945748 | None:intergenic | 35.0% |
| ! | CAATGTCTGAAACATCTCTT+GGG | - | chr1.4:45945730-45945749 | None:intergenic | 35.0% |
| ! | CTTAAAAAGTTTGAGACCGA+GGG | + | chr1.4:45945353-45945372 | MS.gene034660:CDS | 35.0% |
| ! | GAAACAGTTTAGGATATGGT+TGG | + | chr1.4:45946814-45946833 | MS.gene034660:CDS | 35.0% |
| ! | GTTGATATGTTTCTGTTTGC+AGG | + | chr1.4:45944532-45944551 | MS.gene034660:intron | 35.0% |
| ! | TCGTGAATGTATTTTCCGTT+TGG | + | chr1.4:45947711-45947730 | MS.gene034660:intron | 35.0% |
| ! | TTTTCAGAACAACTGTGTGT+GGG | + | chr1.4:45947312-45947331 | MS.gene034660:intron | 35.0% |
| !! | AGTCCCTCATTTTTACCAAA+CGG | - | chr1.4:45947729-45947748 | None:intergenic | 35.0% |
| !! | TGCATCTGTTTCTGTTCATT+GGG | + | chr1.4:45945561-45945580 | MS.gene034660:intron | 35.0% |
| !! | TTTGATTTGGTAAATCCGGA+GGG | - | chr1.4:45947196-45947215 | None:intergenic | 35.0% |
| !! | TTTTTCAGAACAACTGTGTG+TGG | + | chr1.4:45947311-45947330 | MS.gene034660:intron | 35.0% |
| !!! | AGAGGCTCTTTCTAAGATTT+TGG | + | chr1.4:45945090-45945109 | MS.gene034660:CDS | 35.0% |
| !!! | AGCCATAGGTCATTTTAACT+TGG | + | chr1.4:45945691-45945710 | MS.gene034660:CDS | 35.0% |
| !!! | ATAGTCTGCTTTTTGCGAAT+TGG | + | chr1.4:45947105-45947124 | MS.gene034660:intron | 35.0% |
| !!! | GCCATAGGTCATTTTAACTT+GGG | + | chr1.4:45945692-45945711 | MS.gene034660:CDS | 35.0% |
| !!! | GTGTTTTTTCCCGTTTGATT+TGG | - | chr1.4:45947209-45947228 | None:intergenic | 35.0% |
| AATGATGTGGGACTAACATG+GGG | - | chr1.4:45947438-45947457 | None:intergenic | 40.0% | |
| ACAAACAGGGGAAACAGTTT+AGG | + | chr1.4:45946804-45946823 | MS.gene034660:CDS | 40.0% | |
| AGAAAACCAGCAAAGAATCG+TGG | - | chr1.4:45944625-45944644 | None:intergenic | 40.0% | |
| AGGTGTATGGTAACAAACAG+GGG | + | chr1.4:45946792-45946811 | MS.gene034660:CDS | 40.0% | |
| AGTCTCTAGTAAGCTAGCAT+TGG | + | chr1.4:45947584-45947603 | MS.gene034660:intron | 40.0% | |
| ATAGACTCAAATCTTCTGCG+CGG | + | chr1.4:45944276-45944295 | MS.gene034660:CDS | 40.0% | |
| ATTGAACCAGAAATGGGACA+AGG | + | chr1.4:45944784-45944803 | MS.gene034660:CDS | 40.0% | |
| CAACAATGGCTTCAATCAAG+TGG | + | chr1.4:45944966-45944985 | MS.gene034660:intron | 40.0% | |
| CAATGATGTGGGACTAACAT+GGG | - | chr1.4:45947439-45947458 | None:intergenic | 40.0% | |
| CCAAGAGATGTTTCAGACAT+TGG | + | chr1.4:45945728-45945747 | MS.gene034660:CDS | 40.0% | |
| CCGGATTTACCAAATCAAAC+GGG | + | chr1.4:45947197-45947216 | MS.gene034660:intron | 40.0% | |
| CCTGGTAATACTCTAGTATG+TGG | + | chr1.4:45945383-45945402 | MS.gene034660:CDS | 40.0% | |
| GAAAAGAGATTATGGCAGGA+AGG | - | chr1.4:45946613-45946632 | None:intergenic | 40.0% | |
| GATAAGTTCGGATATATGGC+TGG | + | chr1.4:45946856-45946875 | MS.gene034660:CDS | 40.0% | |
| GATATATTACCACAAGGTGC+TGG | + | chr1.4:45945305-45945324 | MS.gene034660:CDS | 40.0% | |
| GATATGGTTGGACAATGTGT+TGG | + | chr1.4:45946826-45946845 | MS.gene034660:CDS | 40.0% | |
| GCCCAAGTTAAAATGACCTA+TGG | - | chr1.4:45945696-45945715 | None:intergenic | 40.0% | |
| GGACTACATTTCAAATACGC+AGG | - | chr1.4:45945948-45945967 | None:intergenic | 40.0% | |
| GGCTGGTGAAGTTTGATAAA+TGG | + | chr1.4:45946873-45946892 | MS.gene034660:CDS | 40.0% | |
| GTCCTCAAAATTGTTAGCGT+AGG | + | chr1.4:45947077-45947096 | MS.gene034660:intron | 40.0% | |
| GTGGGAACTGAGATTACTTA+TGG | + | chr1.4:45944725-45944744 | MS.gene034660:CDS | 40.0% | |
| GTTGGCTACACAGATAAGTT+CGG | + | chr1.4:45946844-45946863 | MS.gene034660:CDS | 40.0% | |
| TACCATTGTGTGATCGAGAT+CGG | - | chr1.4:45944315-45944334 | None:intergenic | 40.0% | |
| TACGAAGTTCAGTGTTACAG+TGG | + | chr1.4:45944483-45944502 | MS.gene034660:intron | 40.0% | |
| TTCAGCATTCCAGGAGTTTA+TGG | + | chr1.4:45945431-45945450 | MS.gene034660:CDS | 40.0% | |
| TTCTTGAACCCATCCATCAT+CGG | - | chr1.4:45944765-45944784 | None:intergenic | 40.0% | |
| ! | ACGGCTTTTCTAATGTTGGA+TGG | + | chr1.4:45947227-45947246 | MS.gene034660:intron | 40.0% |
| ! | AGGGGAAACAGTTTAGGATA+TGG | + | chr1.4:45946810-45946829 | MS.gene034660:CDS | 40.0% |
| ! | ATAACTGGTGTTTTTCCGTC+TGG | + | chr1.4:45947264-45947283 | MS.gene034660:intron | 40.0% |
| ! | ATACCTACTCAAAGTACCTG+AGG | - | chr1.4:45944851-45944870 | None:intergenic | 40.0% |
| ! | ATGCATTGGTCACTTTGCTT+TGG | + | chr1.4:45946283-45946302 | MS.gene034660:intron | 40.0% |
| ! | CCAATGTCTGAAACATCTCT+TGG | - | chr1.4:45945731-45945750 | None:intergenic | 40.0% |
| ! | CCACATACTAGAGTATTACC+AGG | - | chr1.4:45945386-45945405 | None:intergenic | 40.0% |
| ! | CGGCTTTTCTAATGTTGGAT+GGG | + | chr1.4:45947228-45947247 | MS.gene034660:intron | 40.0% |
| ! | GACCTACGCTAACAATTTTG+AGG | - | chr1.4:45947082-45947101 | None:intergenic | 40.0% |
| ! | GCTTAAAAAGTTTGAGACCG+AGG | + | chr1.4:45945352-45945371 | MS.gene034660:CDS | 40.0% |
| ! | TCTGGGATTATACAAGCCAT+AGG | + | chr1.4:45945677-45945696 | MS.gene034660:CDS | 40.0% |
| ! | TTTGAGGTTCAATGCCCTTT+GGG | + | chr1.4:45944586-45944605 | MS.gene034660:CDS | 40.0% |
| ! | TTTTCTGTGAACCATGGTTC+AGG | + | chr1.4:45944895-45944914 | MS.gene034660:intron | 40.0% |
| ! | TTTTGAATGATCGGTACTGC+AGG | + | chr1.4:45945000-45945019 | MS.gene034660:intron | 40.0% |
| !! | CCCGTTTGATTTGGTAAATC+CGG | - | chr1.4:45947200-45947219 | None:intergenic | 40.0% |
| !! | CTGCATCTGTTTCTGTTCAT+TGG | + | chr1.4:45945560-45945579 | MS.gene034660:intron | 40.0% |
| !! | GTTTGATTTGGTAAATCCGG+AGG | - | chr1.4:45947197-45947216 | None:intergenic | 40.0% |
| !! | TCTGTTTCTGTTCATTGGGT+AGG | + | chr1.4:45945565-45945584 | MS.gene034660:intron | 40.0% |
| !! | TTGATTTGGTAAATCCGGAG+GGG | - | chr1.4:45947195-45947214 | None:intergenic | 40.0% |
| !!! | TCTAAGATTTTGGAACAGCG+CGG | + | chr1.4:45945100-45945119 | MS.gene034660:CDS | 40.0% |
| !!! | TCTTTGCTGGTTTTCTCAAC+TGG | + | chr1.4:45944629-45944648 | MS.gene034660:CDS | 40.0% |
| !!! | TTTTGAGGTTCAATGCCCTT+TGG | + | chr1.4:45944585-45944604 | MS.gene034660:CDS | 40.0% |
| AAATCGATGGTTCCCGATGA+TGG | + | chr1.4:45944749-45944768 | MS.gene034660:CDS | 45.0% | |
| AAGCCTCAGGTACTTTGAGT+AGG | + | chr1.4:45944845-45944864 | MS.gene034660:intron | 45.0% | |
| ACCATGACACCATAAACTCC+TGG | - | chr1.4:45945443-45945462 | None:intergenic | 45.0% | |
| ACGTGCAGAAGTTGAGAACT+CGG | + | chr1.4:45945826-45945845 | MS.gene034660:CDS | 45.0% | |
| ACTCTAGTATGTGGTGACTC+CGG | + | chr1.4:45945392-45945411 | MS.gene034660:CDS | 45.0% | |
| ACTGCACAAATGAGGTCCTT+CGG | - | chr1.4:45946115-45946134 | None:intergenic | 45.0% | |
| ACTTTAGTGCAGTTCTCCCA+TGG | - | chr1.4:45946552-45946571 | None:intergenic | 45.0% | |
| AGTACCTGAGGCTTAAGTTC+AGG | - | chr1.4:45944839-45944858 | None:intergenic | 45.0% | |
| ATATCGCCACGATTCTTTGC+TGG | + | chr1.4:45944616-45944635 | MS.gene034660:CDS | 45.0% | |
| ATGATGTGGGACTAACATGG+GGG | - | chr1.4:45947437-45947456 | None:intergenic | 45.0% | |
| ATGCATCCAGGTGAACCAAT+CGG | - | chr1.4:45947841-45947860 | None:intergenic | 45.0% | |
| ATTACCAGGTAGCTTTCCCT+CGG | - | chr1.4:45945372-45945391 | None:intergenic | 45.0% | |
| CAAAGAATCGTGGCGATATG+AGG | - | chr1.4:45944615-45944634 | None:intergenic | 45.0% | |
| CAATGCTAAGCAAGTGACAG+AGG | + | chr1.4:45945072-45945091 | MS.gene034660:CDS | 45.0% | |
| CAATGTCCTTGTCCCATTTC+TGG | - | chr1.4:45944793-45944812 | None:intergenic | 45.0% | |
| CAGATTGTTCCAACCATGAC+TGG | - | chr1.4:45947869-45947888 | None:intergenic | 45.0% | |
| CCACTGCAGTAATTCCTCTT+GGG | - | chr1.4:45945600-45945619 | None:intergenic | 45.0% | |
| CTGAGGCATGCAGAATCTTA+GGG | - | chr1.4:45945646-45945665 | None:intergenic | 45.0% | |
| GAATAGCTCGGCATCATTTC+CGG | - | chr1.4:45945414-45945433 | None:intergenic | 45.0% | |
| GCAATGATGTGGGACTAACA+TGG | - | chr1.4:45947440-45947459 | None:intergenic | 45.0% | |
| GGACAAGGACATTGTCATTG+AGG | + | chr1.4:45944799-45944818 | MS.gene034660:CDS | 45.0% | |
| GTGTCTATGTCAGTGCTTCA+TGG | - | chr1.4:45944419-45944438 | None:intergenic | 45.0% | |
| GTTTCCTGAACTTAAGCCTC+AGG | + | chr1.4:45944832-45944851 | MS.gene034660:CDS | 45.0% | |
| TAGCATGGTGGCAATGATGT+GGG | - | chr1.4:45947450-45947469 | None:intergenic | 45.0% | |
| TATCACTAGGGACTCTGATG+TGG | + | chr1.4:45947389-45947408 | MS.gene034660:intron | 45.0% | |
| TCCTGGAATGCTGAATAGCT+CGG | - | chr1.4:45945426-45945445 | None:intergenic | 45.0% | |
| TCTGAGTCTTCTAGTCCAGA+CGG | - | chr1.4:45947282-45947301 | None:intergenic | 45.0% | |
| TCTTAAAAACCACACCCCTC+CGG | + | chr1.4:45947178-45947197 | MS.gene034660:intron | 45.0% | |
| TCTTGAACCCATCCATCATC+GGG | - | chr1.4:45944764-45944783 | None:intergenic | 45.0% | |
| TGCAGGCAGAAACAGAACAA+CGG | + | chr1.4:45945017-45945036 | MS.gene034660:intron | 45.0% | |
| TGGAACAATCTGACCATGAG+TGG | + | chr1.4:45947877-45947896 | MS.gene034660:CDS | 45.0% | |
| TTCCGATCTCGATCACACAA+TGG | + | chr1.4:45944310-45944329 | MS.gene034660:CDS | 45.0% | |
| TTGGGTTTCAGGATTCCGAT+TGG | + | chr1.4:45947823-45947842 | MS.gene034660:intron | 45.0% | |
| ! | ATATAGCGGAGGAGTTGACA+TGG | + | chr1.4:45945283-45945302 | MS.gene034660:CDS | 45.0% |
| ! | TCCAGGAGTTTATGGTGTCA+TGG | + | chr1.4:45945439-45945458 | MS.gene034660:CDS | 45.0% |
| ! | TCTGAGGCATGCAGAATCTT+AGG | - | chr1.4:45945647-45945666 | None:intergenic | 45.0% |
| !! | CAGAGAATAGCTCGCTTTTG+AGG | + | chr1.4:45944570-45944589 | MS.gene034660:CDS | 45.0% |
| !! | GGAGTTTATGGTGTCATGGT+TGG | + | chr1.4:45945443-45945462 | MS.gene034660:intron | 45.0% |
| !! | TGGTGCTGACCATTCTCTTA+AGG | + | chr1.4:45946748-45946767 | MS.gene034660:CDS | 45.0% |
| !!! | CTAAGATTTTGGAACAGCGC+GGG | + | chr1.4:45945101-45945120 | MS.gene034660:CDS | 45.0% |
| !!! | TAAGATTTTGGAACAGCGCG+GGG | + | chr1.4:45945102-45945121 | MS.gene034660:CDS | 45.0% |
| ACATCTCTTGGGGACAGGTT+TGG | - | chr1.4:45945719-45945738 | None:intergenic | 50.0% | |
| AGAGAATGGTCAGCACCAGA+AGG | - | chr1.4:45946746-45946765 | None:intergenic | 50.0% | |
| AGGCAAACCAGTCTCTAGCA+TGG | - | chr1.4:45947465-45947484 | None:intergenic | 50.0% | |
| ATTGCCACCATGCTAGAGAC+TGG | + | chr1.4:45947455-45947474 | MS.gene034660:intron | 50.0% | |
| CAAACCAGTCTCTAGCATGG+TGG | - | chr1.4:45947462-45947481 | None:intergenic | 50.0% | |
| CATCTCTTGGGGACAGGTTT+GGG | - | chr1.4:45945718-45945737 | None:intergenic | 50.0% | |
| CCCAAGAGGAATTACTGCAG+TGG | + | chr1.4:45945597-45945616 | MS.gene034660:CDS | 50.0% | |
| CTAGCATGGTGGCAATGATG+TGG | - | chr1.4:45947451-45947470 | None:intergenic | 50.0% | |
| CTCAGTTCCCACAGACATGA+TGG | - | chr1.4:45944717-45944736 | None:intergenic | 50.0% | |
| CTGAAACATCTCTTGGGGAC+AGG | - | chr1.4:45945724-45945743 | None:intergenic | 50.0% | |
| GAGAATGGTCAGCACCAGAA+GGG | - | chr1.4:45946745-45946764 | None:intergenic | 50.0% | |
| GCAGGCAGAAACAGAACAAC+GGG | + | chr1.4:45945018-45945037 | MS.gene034660:intron | 50.0% | |
| GCCAACTTGCAGATGAAGAG+CGG | + | chr1.4:45946975-45946994 | MS.gene034660:intron | 50.0% | |
| GCCACTGCAGTAATTCCTCT+TGG | - | chr1.4:45945601-45945620 | None:intergenic | 50.0% | |
| GCGAGCTATTCTCTGTGTCA+TGG | - | chr1.4:45944565-45944584 | None:intergenic | 50.0% | |
| GCGATATGAGGCTTCCCAAA+GGG | - | chr1.4:45944603-45944622 | None:intergenic | 50.0% | |
| GGGTGGATATACACACCAGA+TGG | - | chr1.4:45946725-45946744 | None:intergenic | 50.0% | |
| GGTGTGTATATCCACCCTTC+TGG | + | chr1.4:45946728-45946747 | MS.gene034660:CDS | 50.0% | |
| TACCAACACGTCAGTGTGTC+TGG | - | chr1.4:45944447-45944466 | None:intergenic | 50.0% | |
| ! | AGGATTCCGATTGGTTCACC+TGG | + | chr1.4:45947832-45947851 | MS.gene034660:intron | 50.0% |
| ! | CTGGACTAGAAGACTCAGAC+AGG | + | chr1.4:45947283-45947302 | MS.gene034660:intron | 50.0% |
| !! | GATGGTTCCCGATGATGGAT+GGG | + | chr1.4:45944754-45944773 | MS.gene034660:CDS | 50.0% |
| !! | TTACCACAAGGTGCTGGCAA+AGG | + | chr1.4:45945311-45945330 | MS.gene034660:CDS | 50.0% |
| !!! | TGCTGGTTTTCTCAACTGGC+AGG | + | chr1.4:45944633-45944652 | MS.gene034660:CDS | 50.0% |
| AATGGTCAGCACCAGAAGGG+TGG | - | chr1.4:45946742-45946761 | None:intergenic | 55.0% | |
| CACCAGACACACTGACGTGT+TGG | + | chr1.4:45944442-45944461 | MS.gene034660:intron | 55.0% | |
| CTTGCAGATGAAGAGCGGCA+TGG | + | chr1.4:45946980-45946999 | MS.gene034660:intron | 55.0% | |
| GCATGTGCACCAGTCATGGT+TGG | + | chr1.4:45947857-45947876 | MS.gene034660:CDS | 55.0% | |
| GCCGAGCTATTCAGCATTCC+AGG | + | chr1.4:45945422-45945441 | MS.gene034660:CDS | 55.0% | |
| GCCGCTCTTCATCTGCAAGT+TGG | - | chr1.4:45946979-45946998 | None:intergenic | 55.0% | |
| GCTAGCGAGTTCCTGAACCA+TGG | - | chr1.4:45944909-45944928 | None:intergenic | 55.0% | |
| GGATGCATGTGCACCAGTCA+TGG | + | chr1.4:45947853-45947872 | MS.gene034660:CDS | 55.0% | |
| GGCGATATGAGGCTTCCCAA+AGG | - | chr1.4:45944604-45944623 | None:intergenic | 55.0% | |
| GTAGGTAAGCAACGCCCAAG+AGG | + | chr1.4:45945583-45945602 | MS.gene034660:intron | 55.0% | |
| TGACCTTTGCCAGCACCTTG+TGG | - | chr1.4:45945317-45945336 | None:intergenic | 55.0% | |
| TGACTGGTGCACATGCATCC+AGG | - | chr1.4:45947853-45947872 | None:intergenic | 55.0% | |
| TTGGTAAATCCGGAGGGGTG+TGG | - | chr1.4:45947190-45947209 | None:intergenic | 55.0% | |
| !! | CGATGGTTCCCGATGATGGA+TGG | + | chr1.4:45944753-45944772 | MS.gene034660:CDS | 55.0% |
| GAGACCGAGGGAAAGCTACC+TGG | + | chr1.4:45945365-45945384 | MS.gene034660:CDS | 60.0% | |
| !! | CCTCAGAGCGCTGTGCATCT+GGG | + | chr1.4:45945660-45945679 | MS.gene034660:CDS | 60.0% |
| CCCAGATGCACAGCGCTCTG+AGG | - | chr1.4:45945663-45945682 | None:intergenic | 65.0% | |
| !! | GCCTCAGAGCGCTGTGCATC+TGG | + | chr1.4:45945659-45945678 | MS.gene034660:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 45944272 | 45947908 | 45944272 | ID=MS.gene034660 |
| chr1.4 | mRNA | 45944272 | 45947908 | 45944272 | ID=MS.gene034660.t1;Parent=MS.gene034660 |
| chr1.4 | exon | 45944272 | 45944331 | 45944272 | ID=MS.gene034660.t1.exon1;Parent=MS.gene034660.t1 |
| chr1.4 | CDS | 45944272 | 45944331 | 45944272 | ID=cds.MS.gene034660.t1;Parent=MS.gene034660.t1 |
| chr1.4 | exon | 45944554 | 45944853 | 45944554 | ID=MS.gene034660.t1.exon2;Parent=MS.gene034660.t1 |
| chr1.4 | CDS | 45944554 | 45944853 | 45944554 | ID=cds.MS.gene034660.t1;Parent=MS.gene034660.t1 |
| chr1.4 | exon | 45945022 | 45945123 | 45945022 | ID=MS.gene034660.t1.exon3;Parent=MS.gene034660.t1 |
| chr1.4 | CDS | 45945022 | 45945123 | 45945022 | ID=cds.MS.gene034660.t1;Parent=MS.gene034660.t1 |
| chr1.4 | exon | 45945266 | 45945460 | 45945266 | ID=MS.gene034660.t1.exon4;Parent=MS.gene034660.t1 |
| chr1.4 | CDS | 45945266 | 45945460 | 45945266 | ID=cds.MS.gene034660.t1;Parent=MS.gene034660.t1 |
| chr1.4 | exon | 45945587 | 45945880 | 45945587 | ID=MS.gene034660.t1.exon5;Parent=MS.gene034660.t1 |
| chr1.4 | CDS | 45945587 | 45945880 | 45945587 | ID=cds.MS.gene034660.t1;Parent=MS.gene034660.t1 |
| chr1.4 | exon | 45946719 | 45946905 | 45946719 | ID=MS.gene034660.t1.exon6;Parent=MS.gene034660.t1 |
| chr1.4 | CDS | 45946719 | 45946905 | 45946719 | ID=cds.MS.gene034660.t1;Parent=MS.gene034660.t1 |
| chr1.4 | exon | 45946987 | 45947030 | 45946987 | ID=MS.gene034660.t1.exon7;Parent=MS.gene034660.t1 |
| chr1.4 | CDS | 45946987 | 45947030 | 45946987 | ID=cds.MS.gene034660.t1;Parent=MS.gene034660.t1 |
| chr1.4 | exon | 45947834 | 45947908 | 45947834 | ID=MS.gene034660.t1.exon8;Parent=MS.gene034660.t1 |
| chr1.4 | CDS | 45947834 | 45947908 | 45947834 | ID=cds.MS.gene034660.t1;Parent=MS.gene034660.t1 |
| Gene Sequence |
| Protein sequence |
