Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene03527.t1 | XP_013459262.1 | 95.2 | 334 | 16 | 0 | 1 | 334 | 1 | 334 | 1.70E-186 | 661.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene03527.t1 | P52839 | 50.8 | 319 | 151 | 2 | 8 | 326 | 4 | 316 | 5.6e-93 | 342.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene03527.t1 | A0A072UW61 | 95.2 | 334 | 16 | 0 | 1 | 334 | 1 | 334 | 1.2e-186 | 661.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene03527 | MS.gene55382 | PPI |
| MS.gene03527 | MS.gene99693 | PPI |
| MS.gene03527 | MS.gene53169 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene03527.t1 | MTR_3g435130 | 95.210 | 334 | 16 | 0 | 1 | 334 | 1 | 334 | 0.0 | 659 |
| MS.gene03527.t1 | MTR_0071s0010 | 73.636 | 330 | 87 | 0 | 5 | 334 | 4 | 333 | 0.0 | 516 |
| MS.gene03527.t1 | MTR_3g046670 | 73.636 | 330 | 87 | 0 | 5 | 334 | 4 | 333 | 0.0 | 516 |
| MS.gene03527.t1 | MTR_8g066220 | 71.856 | 334 | 93 | 1 | 1 | 334 | 1 | 333 | 0.0 | 510 |
| MS.gene03527.t1 | MTR_8g066210 | 70.659 | 334 | 82 | 2 | 1 | 334 | 1 | 318 | 5.21e-175 | 488 |
| MS.gene03527.t1 | MTR_3g013500 | 51.572 | 318 | 153 | 1 | 17 | 334 | 21 | 337 | 2.97e-117 | 342 |
| MS.gene03527.t1 | MTR_7g007710 | 48.910 | 321 | 158 | 3 | 18 | 334 | 14 | 332 | 3.31e-113 | 332 |
| MS.gene03527.t1 | MTR_7g007680 | 47.500 | 320 | 159 | 4 | 18 | 334 | 20 | 333 | 1.86e-108 | 321 |
| MS.gene03527.t1 | MTR_8g040820 | 48.077 | 312 | 157 | 4 | 27 | 334 | 34 | 344 | 1.75e-106 | 315 |
| MS.gene03527.t1 | MTR_8g035720 | 46.809 | 329 | 171 | 2 | 10 | 334 | 78 | 406 | 1.96e-105 | 315 |
| MS.gene03527.t1 | MTR_8g040490 | 45.016 | 311 | 167 | 3 | 27 | 334 | 34 | 343 | 1.42e-98 | 296 |
| MS.gene03527.t1 | MTR_8g066280 | 71.277 | 188 | 54 | 0 | 147 | 334 | 22 | 209 | 1.87e-97 | 287 |
| MS.gene03527.t1 | MTR_8g040430 | 42.136 | 337 | 179 | 5 | 3 | 334 | 20 | 345 | 2.58e-96 | 289 |
| MS.gene03527.t1 | MTR_8g040520 | 47.302 | 315 | 158 | 4 | 17 | 327 | 24 | 334 | 9.20e-96 | 288 |
| MS.gene03527.t1 | MTR_3g434790 | 67.188 | 192 | 63 | 0 | 143 | 334 | 43 | 234 | 1.01e-91 | 273 |
| MS.gene03527.t1 | MTR_3g434790 | 73.684 | 57 | 14 | 1 | 1 | 56 | 1 | 57 | 6.54e-22 | 92.8 |
| MS.gene03527.t1 | MTR_8g041790 | 43.533 | 317 | 155 | 6 | 23 | 334 | 28 | 325 | 5.95e-91 | 275 |
| MS.gene03527.t1 | MTR_8g014380 | 43.003 | 293 | 126 | 5 | 16 | 306 | 22 | 275 | 3.74e-80 | 246 |
| MS.gene03527.t1 | MTR_8g040250 | 40.909 | 308 | 144 | 5 | 24 | 327 | 15 | 288 | 1.04e-77 | 240 |
| MS.gene03527.t1 | MTR_8g040820 | 49.315 | 219 | 107 | 3 | 120 | 334 | 27 | 245 | 8.58e-74 | 228 |
| MS.gene03527.t1 | MTR_8g040430 | 44.292 | 219 | 118 | 2 | 120 | 334 | 27 | 245 | 2.15e-65 | 207 |
| MS.gene03527.t1 | MTR_8g040730 | 50.276 | 181 | 81 | 5 | 78 | 253 | 39 | 215 | 3.61e-46 | 164 |
| MS.gene03527.t1 | MTR_8g040730 | 42.945 | 163 | 87 | 3 | 17 | 177 | 338 | 496 | 2.74e-38 | 143 |
| MS.gene03527.t1 | MTR_8g040710 | 46.980 | 149 | 77 | 1 | 178 | 324 | 134 | 282 | 3.61e-40 | 142 |
| MS.gene03527.t1 | MTR_8g066190 | 55.140 | 107 | 30 | 1 | 228 | 334 | 4 | 92 | 3.49e-30 | 110 |
| MS.gene03527.t1 | MTR_8g040315 | 41.985 | 131 | 75 | 1 | 204 | 334 | 3 | 132 | 2.89e-26 | 102 |
| MS.gene03527.t1 | MTR_8g066200 | 80.556 | 36 | 7 | 0 | 152 | 187 | 25 | 60 | 7.78e-15 | 68.9 |
| MS.gene03527.t1 | MTR_8g040410 | 48.333 | 60 | 30 | 1 | 66 | 124 | 21 | 80 | 1.66e-12 | 64.7 |
| MS.gene03527.t1 | MTR_8g040410 | 33.708 | 89 | 41 | 1 | 218 | 306 | 75 | 145 | 1.43e-11 | 62.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene03527.t1 | AT3G45070 | 51.274 | 314 | 150 | 3 | 15 | 327 | 10 | 321 | 7.80e-112 | 328 |
| MS.gene03527.t1 | AT2G03760 | 50.313 | 320 | 153 | 2 | 8 | 327 | 4 | 317 | 1.31e-111 | 327 |
| MS.gene03527.t1 | AT3G45070 | 51.274 | 314 | 150 | 3 | 15 | 327 | 5 | 316 | 1.61e-111 | 327 |
| MS.gene03527.t1 | AT3G45070 | 51.274 | 314 | 150 | 3 | 15 | 327 | 37 | 348 | 1.75e-111 | 328 |
| MS.gene03527.t1 | AT5G07010 | 47.799 | 318 | 164 | 2 | 11 | 327 | 33 | 349 | 6.92e-110 | 324 |
| MS.gene03527.t1 | AT3G45080 | 49.689 | 322 | 158 | 4 | 15 | 334 | 10 | 329 | 6.81e-105 | 310 |
| MS.gene03527.t1 | AT5G07000 | 47.040 | 321 | 166 | 3 | 17 | 334 | 25 | 344 | 7.14e-104 | 308 |
| MS.gene03527.t1 | AT2G03770 | 47.826 | 322 | 159 | 2 | 13 | 334 | 10 | 322 | 8.60e-104 | 307 |
| MS.gene03527.t1 | AT1G13420 | 51.475 | 305 | 140 | 4 | 25 | 327 | 26 | 324 | 4.97e-103 | 306 |
| MS.gene03527.t1 | AT5G43690 | 46.364 | 330 | 170 | 5 | 9 | 334 | 5 | 331 | 1.24e-96 | 290 |
| MS.gene03527.t1 | AT2G03750 | 45.426 | 317 | 170 | 3 | 11 | 327 | 30 | 343 | 1.97e-96 | 290 |
| MS.gene03527.t1 | AT4G26280 | 47.619 | 315 | 144 | 3 | 15 | 327 | 7 | 302 | 7.66e-96 | 287 |
| MS.gene03527.t1 | AT1G28170 | 47.546 | 326 | 164 | 6 | 11 | 334 | 6 | 326 | 3.24e-95 | 286 |
| MS.gene03527.t1 | AT2G14920 | 46.429 | 308 | 157 | 4 | 25 | 327 | 22 | 326 | 4.58e-91 | 275 |
| MS.gene03527.t1 | AT1G18590 | 44.409 | 313 | 160 | 5 | 22 | 327 | 31 | 336 | 2.94e-89 | 271 |
| MS.gene03527.t1 | AT1G74100 | 44.089 | 313 | 161 | 5 | 22 | 327 | 23 | 328 | 3.24e-89 | 271 |
| MS.gene03527.t1 | AT1G13430 | 45.652 | 322 | 153 | 5 | 25 | 327 | 26 | 344 | 3.25e-84 | 258 |
| MS.gene03527.t1 | AT1G74090 | 45.367 | 313 | 157 | 6 | 22 | 327 | 35 | 340 | 4.91e-81 | 250 |
| MS.gene03527.t1 | AT2G27570 | 41.853 | 313 | 126 | 4 | 15 | 327 | 10 | 266 | 9.50e-80 | 244 |
Find 56 sgRNAs with CRISPR-Local
Find 74 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCATCAATATCAAGGATTT+TGG | 0.116605 | 3.1:-27521254 | MS.gene03527:CDS |
| TCATCTTCTCGCAAGTATTT+TGG | 0.165419 | 3.1:+27521345 | None:intergenic |
| CCCTTTAGATTCTTCATCTT+TGG | 0.199939 | 3.1:+27520609 | None:intergenic |
| CACTGTAATTGAAGAGAAAT+TGG | 0.219928 | 3.1:-27520419 | MS.gene03527:CDS |
| TGACTTTGTTTGGACCCTTT+TGG | 0.231735 | 3.1:-27520765 | MS.gene03527:CDS |
| ACTAGAGGGTTGACTTTGTT+TGG | 0.232668 | 3.1:-27520775 | MS.gene03527:CDS |
| CTAAGAGGATATCTGTATTA+AGG | 0.241661 | 3.1:+27521178 | None:intergenic |
| AGCCAAGTGGTACCTGATTT+AGG | 0.261740 | 3.1:+27521147 | None:intergenic |
| TTGGAGAGGATAATGAATTT+AGG | 0.273749 | 3.1:+27520980 | None:intergenic |
| GGGAGCATGTATTAGGTTAT+TGG | 0.275725 | 3.1:-27520744 | MS.gene03527:CDS |
| TGTTCTTGTTCCCTTCTTAG+AGG | 0.279880 | 3.1:-27521037 | MS.gene03527:CDS |
| ACCTACTACATGGCAAAATT+AGG | 0.307696 | 3.1:-27521387 | None:intergenic |
| CAAACCTTACCATTAGAAAA+AGG | 0.343026 | 3.1:-27521294 | MS.gene03527:CDS |
| TAAGAGGATATCTGTATTAA+GGG | 0.343458 | 3.1:+27521179 | None:intergenic |
| CCAAAGATGAAGAATCTAAA+GGG | 0.366499 | 3.1:-27520609 | MS.gene03527:CDS |
| GATTCTTCATCTTTGGTGAA+TGG | 0.376756 | 3.1:+27520616 | None:intergenic |
| AGTGAAGCAAAAGTGTCTTT+AGG | 0.383696 | 3.1:+27520871 | None:intergenic |
| GGATATCTGTATTAAGGGCT+TGG | 0.410976 | 3.1:+27521184 | None:intergenic |
| ACCTAATACATGCTCCCAAA+AGG | 0.431604 | 3.1:+27520750 | None:intergenic |
| AACTTGGAGGTTAATAAGAC+TGG | 0.431966 | 3.1:-27520541 | MS.gene03527:CDS |
| GAGGATAATGAATTTAGGTT+AGG | 0.436457 | 3.1:+27520985 | None:intergenic |
| ATCCTTGATATTGATGAAAG+TGG | 0.445115 | 3.1:+27521259 | None:intergenic |
| CGTCGTGGCCAAGTTGGAGA+TGG | 0.463676 | 3.1:-27520481 | MS.gene03527:CDS |
| GTAAAGGTCAACCTCTAAGA+AGG | 0.465168 | 3.1:+27521026 | None:intergenic |
| AGGTTATTGGAAGGAAAGCT+TGG | 0.478285 | 3.1:-27520731 | MS.gene03527:CDS |
| ACCCACTTTCATCAATATCA+AGG | 0.484275 | 3.1:-27521261 | MS.gene03527:CDS |
| TTAGTTACTACTCCTAAATC+AGG | 0.484354 | 3.1:-27521159 | MS.gene03527:CDS |
| ACCAAAGATGAAGAATCTAA+AGG | 0.486055 | 3.1:-27520610 | MS.gene03527:CDS |
| TGAGAAGCTGAGCAACTTGG+AGG | 0.486499 | 3.1:-27520554 | MS.gene03527:CDS |
| AAGACTGGGAAAGTGTCATT+TGG | 0.496808 | 3.1:-27520526 | MS.gene03527:CDS |
| GCTTCTCTCCATCTCCAACT+TGG | 0.504155 | 3.1:+27520473 | None:intergenic |
| AAAAGAGTCAAGTTGTAAAG+TGG | 0.513844 | 3.1:-27520911 | MS.gene03527:CDS |
| CCTAATACATGCTCCCAAAA+GGG | 0.524183 | 3.1:+27520751 | None:intergenic |
| CATAGTCTTTATCATAGTAA+AGG | 0.529457 | 3.1:+27521010 | None:intergenic |
| TCCTTGATATTGATGAAAGT+GGG | 0.537724 | 3.1:+27521260 | None:intergenic |
| TGAGGGTTTGTAGTGAGTAA+AGG | 0.538626 | 3.1:+27521060 | None:intergenic |
| CTCCTAAATCAGGTACCACT+TGG | 0.544104 | 3.1:-27521149 | MS.gene03527:CDS |
| ATATGTGTTGAAAAGAGTCT+TGG | 0.548931 | 3.1:+27520961 | None:intergenic |
| TTTGCGGTTTATCAAAGCAA+AGG | 0.554087 | 3.1:+27521113 | None:intergenic |
| ATTTAGGAGTAGTAACTAAG+AGG | 0.562406 | 3.1:+27521163 | None:intergenic |
| TAAAGGTCAACCTCTAAGAA+GGG | 0.586164 | 3.1:+27521027 | None:intergenic |
| AAGAAGGGAACAAGAACATG+AGG | 0.591246 | 3.1:+27521042 | None:intergenic |
| TGACTTAGGCAAAGAATGCA+AGG | 0.596486 | 3.1:-27521325 | MS.gene03527:CDS |
| ACTATGGCATTTCTCAAACA+AGG | 0.596868 | 3.1:-27520851 | MS.gene03527:CDS |
| GCATGTATTAGGTTATTGGA+AGG | 0.598201 | 3.1:-27520740 | MS.gene03527:CDS |
| ACTTGGAGGTTAATAAGACT+GGG | 0.607784 | 3.1:-27520540 | MS.gene03527:CDS |
| AAGGTAAGATCACAAAGTAG+TGG | 0.608348 | 3.1:-27520832 | MS.gene03527:CDS |
| TTTGACAAGATAAAACACCT+TGG | 0.614663 | 3.1:+27521214 | None:intergenic |
| CAAAGATGAAGAATCTAAAG+GGG | 0.634971 | 3.1:-27520608 | MS.gene03527:CDS |
| AAGCTTGGAAAGATCAAACA+AGG | 0.649373 | 3.1:-27520716 | MS.gene03527:CDS |
| AGATGAAGAATCTAAAGGGG+TGG | 0.649973 | 3.1:-27520605 | MS.gene03527:CDS |
| GGTTAATGCTTTGAGCCAAG+TGG | 0.653823 | 3.1:+27521134 | None:intergenic |
| TGTTGAAAAGAGTCTTGGAG+AGG | 0.663024 | 3.1:+27520966 | None:intergenic |
| AGAAGGGAACAAGAACATGA+GGG | 0.673571 | 3.1:+27521043 | None:intergenic |
| ATTGGCACAAGAATTCTCCA+AGG | 0.684458 | 3.1:-27521231 | MS.gene03527:CDS |
| TACTTGCGAGAAGATGACTT+AGG | 0.695332 | 3.1:-27521339 | MS.gene03527:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GAATATTTTGATATTTTTTG+CGG | + | chr3.1:27520680-27520699 | None:intergenic | 15.0% |
| !!! | AGCTTTTTCAAATGAAAATA+AGG | + | chr3.1:27521119-27521138 | None:intergenic | 20.0% |
| !!! | CTTTTGAAAATTTTACTAGA+GGG | - | chr3.1:27520985-27521004 | MS.gene03527:CDS | 20.0% |
| !!! | TCTTTTGAAAATTTTACTAG+AGG | - | chr3.1:27520984-27521003 | MS.gene03527:CDS | 20.0% |
| ! | CATAGTCTTTATCATAGTAA+AGG | + | chr3.1:27520767-27520786 | None:intergenic | 25.0% |
| ! | TAAGAGGATATCTGTATTAA+GGG | + | chr3.1:27520598-27520617 | None:intergenic | 25.0% |
| !! | TTCATCAATATCAAGGATTT+TGG | - | chr3.1:27520520-27520539 | MS.gene03527:CDS | 25.0% |
| !! | TTTTCAAAAGACTCTTCTAA+TGG | + | chr3.1:27520975-27520994 | None:intergenic | 25.0% |
| ACCAAAGATGAAGAATCTAA+AGG | - | chr3.1:27521164-27521183 | MS.gene03527:CDS | 30.0% | |
| ATATGTGTTGAAAAGAGTCT+TGG | + | chr3.1:27520816-27520835 | None:intergenic | 30.0% | |
| ATCCTTGATATTGATGAAAG+TGG | + | chr3.1:27520518-27520537 | None:intergenic | 30.0% | |
| ATTTAGGAGTAGTAACTAAG+AGG | + | chr3.1:27520614-27520633 | None:intergenic | 30.0% | |
| CAAACCTTACCATTAGAAAA+AGG | - | chr3.1:27520480-27520499 | MS.gene03527:CDS | 30.0% | |
| CAAAGATGAAGAATCTAAAG+GGG | - | chr3.1:27521166-27521185 | MS.gene03527:CDS | 30.0% | |
| CACTGTAATTGAAGAGAAAT+TGG | - | chr3.1:27521355-27521374 | MS.gene03527:CDS | 30.0% | |
| CCAAAGATGAAGAATCTAAA+GGG | - | chr3.1:27521165-27521184 | MS.gene03527:CDS | 30.0% | |
| CTAAGAGGATATCTGTATTA+AGG | + | chr3.1:27520599-27520618 | None:intergenic | 30.0% | |
| CTTACCATTAGAAAAAGGAT+GGG | - | chr3.1:27520485-27520504 | MS.gene03527:CDS | 30.0% | |
| TCCTTGATATTGATGAAAGT+GGG | + | chr3.1:27520517-27520536 | None:intergenic | 30.0% | |
| TTAGTTACTACTCCTAAATC+AGG | - | chr3.1:27520615-27520634 | MS.gene03527:CDS | 30.0% | |
| TTGGAGAGGATAATGAATTT+AGG | + | chr3.1:27520797-27520816 | None:intergenic | 30.0% | |
| TTTGACAAGATAAAACACCT+TGG | + | chr3.1:27520563-27520582 | None:intergenic | 30.0% | |
| ! | AAAAGAGTCAAGTTGTAAAG+TGG | - | chr3.1:27520863-27520882 | MS.gene03527:CDS | 30.0% |
| ! | CAATATCAAGGATTTTGGAT+TGG | - | chr3.1:27520525-27520544 | MS.gene03527:CDS | 30.0% |
| ! | CTTGACTCTTTTACAGATTT+TGG | + | chr3.1:27520855-27520874 | None:intergenic | 30.0% |
| ! | GAGGATAATGAATTTAGGTT+AGG | + | chr3.1:27520792-27520811 | None:intergenic | 30.0% |
| !! | GATTTTGGCAACATAACATA+TGG | + | chr3.1:27520840-27520859 | None:intergenic | 30.0% |
| !!! | GAAAAAGCTTGCTGAATTTT+TGG | - | chr3.1:27521130-27521149 | MS.gene03527:CDS | 30.0% |
| AACTTGGAGGTTAATAAGAC+TGG | - | chr3.1:27521233-27521252 | MS.gene03527:CDS | 35.0% | |
| AAGCTTGGAAAGATCAAACA+AGG | - | chr3.1:27521058-27521077 | MS.gene03527:CDS | 35.0% | |
| AAGGTAAGATCACAAAGTAG+TGG | - | chr3.1:27520942-27520961 | MS.gene03527:CDS | 35.0% | |
| ACCCACTTTCATCAATATCA+AGG | - | chr3.1:27520513-27520532 | MS.gene03527:CDS | 35.0% | |
| ACTATGGCATTTCTCAAACA+AGG | - | chr3.1:27520923-27520942 | MS.gene03527:CDS | 35.0% | |
| ACTTGGAGGTTAATAAGACT+GGG | - | chr3.1:27521234-27521253 | MS.gene03527:CDS | 35.0% | |
| CCCTTTAGATTCTTCATCTT+TGG | + | chr3.1:27521168-27521187 | None:intergenic | 35.0% | |
| CCTTACCATTAGAAAAAGGA+TGG | - | chr3.1:27520484-27520503 | MS.gene03527:CDS | 35.0% | |
| GATTCTTCATCTTTGGTGAA+TGG | + | chr3.1:27521161-27521180 | None:intergenic | 35.0% | |
| GCATGTATTAGGTTATTGGA+AGG | - | chr3.1:27521034-27521053 | MS.gene03527:CDS | 35.0% | |
| TTTGCGGTTTATCAAAGCAA+AGG | + | chr3.1:27520664-27520683 | None:intergenic | 35.0% | |
| ! | AAGACACTTTTGCTTCACTA+TGG | - | chr3.1:27520907-27520926 | MS.gene03527:CDS | 35.0% |
| ! | CCATCCTTTTTCTAATGGTA+AGG | + | chr3.1:27520487-27520506 | None:intergenic | 35.0% |
| ! | CTAACCCATCCTTTTTCTAA+TGG | + | chr3.1:27520492-27520511 | None:intergenic | 35.0% |
| ! | TAAAGGTCAACCTCTAAGAA+GGG | + | chr3.1:27520750-27520769 | None:intergenic | 35.0% |
| ! | TCATCTTCTCGCAAGTATTT+TGG | + | chr3.1:27520432-27520451 | None:intergenic | 35.0% |
| !! | AACAAAGCTTATTTTCGTCG+TGG | - | chr3.1:27521278-27521297 | MS.gene03527:CDS | 35.0% |
| !! | AGTGAAGCAAAAGTGTCTTT+AGG | + | chr3.1:27520906-27520925 | None:intergenic | 35.0% |
| AAGAAGGGAACAAGAACATG+AGG | + | chr3.1:27520735-27520754 | None:intergenic | 40.0% | |
| ACCTAATACATGCTCCCAAA+AGG | + | chr3.1:27521027-27521046 | None:intergenic | 40.0% | |
| AGAAGGGAACAAGAACATGA+GGG | + | chr3.1:27520734-27520753 | None:intergenic | 40.0% | |
| AGATGAAGAATCTAAAGGGG+TGG | - | chr3.1:27521169-27521188 | MS.gene03527:CDS | 40.0% | |
| AGGTTATTGGAAGGAAAGCT+TGG | - | chr3.1:27521043-27521062 | MS.gene03527:CDS | 40.0% | |
| ATTGGCACAAGAATTCTCCA+AGG | - | chr3.1:27520543-27520562 | MS.gene03527:CDS | 40.0% | |
| CCTAATACATGCTCCCAAAA+GGG | + | chr3.1:27521026-27521045 | None:intergenic | 40.0% | |
| GGATATCTGTATTAAGGGCT+TGG | + | chr3.1:27520593-27520612 | None:intergenic | 40.0% | |
| TACTTGCGAGAAGATGACTT+AGG | - | chr3.1:27520435-27520454 | MS.gene03527:CDS | 40.0% | |
| TGACTTAGGCAAAGAATGCA+AGG | - | chr3.1:27520449-27520468 | MS.gene03527:CDS | 40.0% | |
| TGAGGGTTTGTAGTGAGTAA+AGG | + | chr3.1:27520717-27520736 | None:intergenic | 40.0% | |
| TGTTCTTGTTCCCTTCTTAG+AGG | - | chr3.1:27520737-27520756 | MS.gene03527:CDS | 40.0% | |
| TGTTGAAAAGAGTCTTGGAG+AGG | + | chr3.1:27520811-27520830 | None:intergenic | 40.0% | |
| ! | ACTAGAGGGTTGACTTTGTT+TGG | - | chr3.1:27520999-27521018 | MS.gene03527:CDS | 40.0% |
| ! | GGGAGCATGTATTAGGTTAT+TGG | - | chr3.1:27521030-27521049 | MS.gene03527:CDS | 40.0% |
| ! | GTAAAGGTCAACCTCTAAGA+AGG | + | chr3.1:27520751-27520770 | None:intergenic | 40.0% |
| !! | AAGACTGGGAAAGTGTCATT+TGG | - | chr3.1:27521248-27521267 | MS.gene03527:CDS | 40.0% |
| !! | GACTTTGTTTGGACCCTTTT+GGG | - | chr3.1:27521010-27521029 | MS.gene03527:CDS | 40.0% |
| !! | TGACTTTGTTTGGACCCTTT+TGG | - | chr3.1:27521009-27521028 | MS.gene03527:CDS | 40.0% |
| !! | TTTTGAGAAGCTGAGCAACT+TGG | - | chr3.1:27521217-27521236 | MS.gene03527:CDS | 40.0% |
| AGCCAAGTGGTACCTGATTT+AGG | + | chr3.1:27520630-27520649 | None:intergenic | 45.0% | |
| CTCCTAAATCAGGTACCACT+TGG | - | chr3.1:27520625-27520644 | MS.gene03527:CDS | 45.0% | |
| ! | GGTTAATGCTTTGAGCCAAG+TGG | + | chr3.1:27520643-27520662 | None:intergenic | 45.0% |
| ! | TATTTTCGTCGTGGCCAAGT+TGG | - | chr3.1:27521287-27521306 | MS.gene03527:CDS | 45.0% |
| !! | CCCTTTTGGGAGCATGTATT+AGG | - | chr3.1:27521023-27521042 | MS.gene03527:CDS | 45.0% |
| GCTTCTCTCCATCTCCAACT+TGG | + | chr3.1:27521304-27521323 | None:intergenic | 50.0% | |
| TGAGAAGCTGAGCAACTTGG+AGG | - | chr3.1:27521220-27521239 | MS.gene03527:CDS | 50.0% | |
| ! | CGTCGTGGCCAAGTTGGAGA+TGG | - | chr3.1:27521293-27521312 | MS.gene03527:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 27520396 | 27521400 | 27520396 | ID=MS.gene03527 |
| chr3.1 | mRNA | 27520396 | 27521400 | 27520396 | ID=MS.gene03527.t1;Parent=MS.gene03527 |
| chr3.1 | exon | 27520396 | 27521400 | 27520396 | ID=MS.gene03527.t1.exon1;Parent=MS.gene03527.t1 |
| chr3.1 | CDS | 27520396 | 27521400 | 27520396 | ID=cds.MS.gene03527.t1;Parent=MS.gene03527.t1 |
| Gene Sequence |
| Protein sequence |
