AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene035877

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene035877.t1 MTR_5g064080 98.817 676 6 2 1 675 1 675 0.0 1375
MS.gene035877.t1 MTR_3g074780 76.623 693 142 4 1 674 1 692 0.0 1118
MS.gene035877.t1 MTR_4g083030 52.273 616 253 10 74 672 15 606 0.0 665
MS.gene035877.t1 MTR_1g075900 37.591 548 299 10 144 670 89 614 3.31e-119 369
MS.gene035877.t1 MTR_1g442840 39.069 494 273 9 160 648 5 475 3.51e-116 358
MS.gene035877.t1 MTR_1g442840 37.739 522 285 10 144 648 90 588 2.36e-115 359
MS.gene035877.t1 MTR_1g069785 34.206 611 351 13 72 667 8 582 7.40e-113 352
MS.gene035877.t1 MTR_5g080720 34.137 539 316 12 144 667 123 637 1.66e-106 337
MS.gene035877.t1 MTR_3g068990 33.886 543 320 12 144 671 151 669 8.10e-105 333
MS.gene035877.t1 MTR_1g029730 35.484 527 310 14 151 669 154 658 7.99e-97 312
MS.gene035877.t1 MTR_7g076150 33.032 554 323 13 136 671 65 588 2.41e-96 309
MS.gene035877.t1 MTR_5g080720 35.319 470 270 10 144 600 123 571 9.89e-95 304
MS.gene035877.t1 MTR_1g051055 35.036 548 303 13 146 670 86 603 8.18e-94 303
MS.gene035877.t1 MTR_1g101370 31.811 635 348 21 81 670 23 617 1.24e-93 303
MS.gene035877.t1 MTR_5g083150 32.630 521 295 13 169 675 125 603 1.48e-93 302
MS.gene035877.t1 MTR_8g432620 32.044 543 325 10 144 670 86 600 5.19e-93 300
MS.gene035877.t1 MTR_8g432680 32.155 566 315 16 140 670 99 630 1.28e-92 300
MS.gene035877.t1 MTR_0019s0120 32.973 555 311 17 149 674 108 630 2.20e-92 300
MS.gene035877.t1 MTR_8g100075 31.551 561 322 17 144 674 96 624 3.22e-91 296
MS.gene035877.t1 MTR_8g071280 31.365 542 320 13 149 667 73 585 1.69e-90 293
MS.gene035877.t1 MTR_5g026930 32.541 547 315 14 149 671 75 591 2.02e-90 293
MS.gene035877.t1 MTR_3g096480 33.100 571 311 18 132 671 247 777 3.37e-90 298
MS.gene035877.t1 MTR_3g088790 33.273 550 293 17 156 671 234 743 8.54e-90 296
MS.gene035877.t1 MTR_5g021100 32.950 522 299 14 169 675 353 838 3.57e-87 291
MS.gene035877.t1 MTR_3g071530 31.881 505 297 12 175 671 182 647 9.31e-87 285
MS.gene035877.t1 MTR_7g076170 32.246 552 314 18 149 670 104 625 3.41e-86 283
MS.gene035877.t1 MTR_7g006060 32.246 552 311 14 140 660 37 556 4.67e-86 281
MS.gene035877.t1 MTR_7g076150 34.649 456 264 10 224 671 16 445 1.73e-85 276
MS.gene035877.t1 MTR_8g093880 32.824 524 296 14 151 652 301 790 1.67e-84 283
MS.gene035877.t1 MTR_5g040360 30.212 566 332 16 132 670 70 599 1.54e-83 275
MS.gene035877.t1 MTR_8g055840 30.212 566 333 14 132 670 70 600 3.43e-83 275
MS.gene035877.t1 MTR_3g040370 30.505 554 319 17 144 670 83 597 6.85e-82 271
MS.gene035877.t1 MTR_4g098890 31.495 562 318 19 136 667 76 600 5.09e-81 281
MS.gene035877.t1 MTR_8g076650 32.108 517 302 13 169 671 410 891 6.17e-80 272
MS.gene035877.t1 MTR_1g022255 31.227 554 306 19 142 671 198 700 4.98e-78 263
MS.gene035877.t1 MTR_5g026930 30.905 453 261 13 149 577 75 499 1.77e-64 222
MS.gene035877.t1 MTR_0019s0120 31.087 460 261 15 145 577 104 534 2.15e-64 222
MS.gene035877.t1 MTR_1g022255 27.990 418 234 15 142 536 198 571 3.24e-41 159
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene035877.t1 AT1G78240 67.435 694 197 8 1 675 1 684 0.0 954
MS.gene035877.t1 AT1G78240 67.435 694 197 8 1 675 1 684 0.0 954
MS.gene035877.t1 AT1G13860 51.888 609 277 8 70 672 5 603 0.0 658
MS.gene035877.t1 AT1G13860 51.888 609 277 8 70 672 5 603 0.0 658
MS.gene035877.t1 AT1G13860 51.888 609 277 8 70 672 5 603 0.0 658
MS.gene035877.t1 AT1G13860 51.888 609 277 8 70 672 5 603 0.0 658
MS.gene035877.t1 AT2G03480 51.216 617 266 10 70 672 11 606 0.0 632
MS.gene035877.t1 AT2G03480 50.405 617 260 9 70 672 11 595 0.0 622
MS.gene035877.t1 AT1G13860 56.388 454 186 6 224 672 1 447 0.0 547
MS.gene035877.t1 AT2G03480 47.743 421 200 8 70 476 11 425 4.20e-127 383
MS.gene035877.t1 AT1G04430 36.903 607 329 12 84 660 10 592 9.07e-117 363
MS.gene035877.t1 AT1G04430 36.903 607 329 12 84 660 10 592 9.07e-117 363
MS.gene035877.t1 AT1G04430 36.903 607 329 12 84 660 10 592 9.07e-117 363
MS.gene035877.t1 AT3G23300 36.765 544 298 11 149 670 82 601 1.69e-115 359
MS.gene035877.t1 AT3G23300 36.765 544 298 11 149 670 82 601 1.69e-115 359
MS.gene035877.t1 AT5G14430 36.804 557 302 11 144 675 78 609 1.43e-112 352
MS.gene035877.t1 AT4G14360 37.016 516 287 9 149 648 79 572 8.86e-112 350
MS.gene035877.t1 AT4G14360 37.016 516 287 9 149 648 79 572 8.86e-112 350
MS.gene035877.t1 AT5G14430 36.445 557 304 11 144 675 78 609 3.41e-111 348
MS.gene035877.t1 AT5G06050 35.714 546 302 13 144 669 147 663 6.43e-110 347
MS.gene035877.t1 AT1G77260 34.438 543 307 11 144 667 141 653 4.76e-103 328
MS.gene035877.t1 AT2G39750 32.545 550 332 12 137 671 168 693 1.54e-102 328
MS.gene035877.t1 AT3G10200 35.390 551 296 15 146 670 72 588 1.31e-98 315
MS.gene035877.t1 AT5G04060 34.156 527 307 11 153 670 102 597 1.57e-98 315
MS.gene035877.t1 AT4G19120 32.982 570 318 16 127 670 59 590 9.39e-96 308
MS.gene035877.t1 AT4G19120 32.982 570 318 16 127 670 59 590 9.39e-96 308
MS.gene035877.t1 AT1G31850 32.844 545 310 16 149 667 79 593 3.18e-95 306
MS.gene035877.t1 AT1G31850 32.844 545 310 16 149 667 79 593 3.18e-95 306
MS.gene035877.t1 AT1G31850 32.844 545 310 16 149 667 79 593 3.18e-95 306
MS.gene035877.t1 AT1G31850 32.844 545 310 16 149 667 79 593 3.18e-95 306
MS.gene035877.t1 AT4G00740 32.410 614 332 16 89 671 33 594 1.52e-94 304
MS.gene035877.t1 AT4G00740 32.410 614 332 16 89 671 33 594 1.52e-94 304
MS.gene035877.t1 AT1G33170 32.258 558 316 17 144 670 108 634 3.22e-92 299
MS.gene035877.t1 AT4G10440 31.598 557 320 16 144 670 91 616 1.01e-91 298
MS.gene035877.t1 AT2G43200 34.457 534 295 15 149 658 94 596 1.43e-90 294
MS.gene035877.t1 AT2G43200 34.457 534 295 15 149 658 94 596 1.43e-90 294
MS.gene035877.t1 AT4G00750 32.865 569 314 19 141 674 91 626 2.44e-90 294
MS.gene035877.t1 AT2G45750 33.273 550 297 15 148 661 89 604 4.01e-90 293
MS.gene035877.t1 AT2G34300 32.061 524 296 14 169 671 274 758 6.93e-88 291
MS.gene035877.t1 AT2G34300 32.061 524 296 14 169 671 274 758 6.93e-88 291
MS.gene035877.t1 AT2G34300 32.061 524 296 14 169 671 274 758 6.93e-88 291
MS.gene035877.t1 AT2G40280 30.605 562 333 16 123 671 65 582 1.21e-87 286
MS.gene035877.t1 AT1G26850 31.306 559 326 14 140 670 80 608 1.90e-87 286
MS.gene035877.t1 AT1G26850 31.306 559 326 14 140 670 80 608 1.90e-87 286
MS.gene035877.t1 AT3G10200 35.329 501 267 14 146 623 72 538 2.52e-87 285
MS.gene035877.t1 AT5G64030 32.051 546 314 16 155 675 308 821 4.77e-87 290
MS.gene035877.t1 AT1G29470 33.333 519 296 14 169 671 274 758 2.89e-86 287
MS.gene035877.t1 AT1G29470 33.333 519 296 14 169 671 274 758 2.89e-86 287
MS.gene035877.t1 AT3G56080 31.471 537 292 15 143 651 107 595 3.61e-86 283
MS.gene035877.t1 AT4G18030 31.341 552 319 16 146 670 85 603 8.10e-86 282
MS.gene035877.t1 AT3G51070 32.051 546 306 15 155 671 381 890 6.83e-85 286
MS.gene035877.t1 AT1G19430 31.481 540 300 17 155 671 231 723 6.00e-76 258
MS.gene035877.t1 AT1G19430 31.481 540 300 17 155 671 231 723 6.00e-76 258
MS.gene035877.t1 AT3G56080 31.612 484 258 13 143 598 107 545 1.34e-74 250
MS.gene035877.t1 AT3G51070 32.981 473 257 14 155 598 381 822 7.20e-74 254
MS.gene035877.t1 AT4G19120 30.635 457 265 13 146 577 70 499 3.84e-66 226
MS.gene035877.t1 AT1G26850 29.025 441 261 11 140 555 80 493 7.47e-54 193
MS.gene035877.t1 AT1G19430 28.780 410 220 14 155 537 231 595 1.76e-38 151

Find 148 sgRNAs with CRISPR-Local

Find 333 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CTACTGGAAAAGATGTTATT+TGG 0.156678 5.2:-53553580 MS.gene035877:CDS
ACTCTAGCTGATTCTATTAA+AGG 0.186941 5.2:+53550134 None:intergenic
CCTAAACTCAAATACCTTTC+TGG 0.213244 5.2:+53552383 None:intergenic
GTTTCTTGAAGAAAGGTTTC+TGG 0.232166 5.2:+53550036 None:intergenic
GCACAAGAGGTTCTTTCTTC+TGG 0.244322 5.2:-53553536 MS.gene035877:CDS
TGGATATTGGTGAGATTTCT+AGG 0.258788 5.2:-53553772 MS.gene035877:CDS
CTCTTGCTTCCCATTTCAGC+TGG 0.280333 5.2:+53550102 None:intergenic
CCTCTGCATCGAGGTGTTTC+CGG 0.287071 5.2:-53554154 MS.gene035877:CDS
ATCAACTTAAAACGGCTTCT+TGG 0.300302 5.2:+53553944 None:intergenic
GACCGGGCGGATACTTTGTT+TGG 0.300878 5.2:-53552237 MS.gene035877:CDS
TCCTCGTCACCGGGCCTCTT+CGG 0.310023 5.2:+53551612 None:intergenic
AGAGGAACTTTGTAATTAAC+TGG 0.318130 5.2:+53553611 None:intergenic
AGAAAGGTTTCTGGCATATC+AGG 0.322309 5.2:+53550045 None:intergenic
GTTTCAGATTTGTTGGATAT+TGG 0.327113 5.2:-53553785 MS.gene035877:CDS
GAAACTTGTTTCAGATTTGT+TGG 0.328549 5.2:-53553792 MS.gene035877:CDS
TCTTAGCAGCCCAGCTGAAA+TGG 0.337346 5.2:-53550112 MS.gene035877:CDS
ATTACAAAGTTCCTCTTAGA+TGG 0.341609 5.2:-53553604 MS.gene035877:CDS
AGATAGTTAGGTCCAGTTCT+TGG 0.345037 5.2:+53551474 None:intergenic
TACTGGAAAAGATGTTATTT+GGG 0.346347 5.2:-53553579 MS.gene035877:CDS
TCAGCCTCTCATATGTTTGA+TGG 0.353415 5.2:-53553256 MS.gene035877:CDS
CATCAGATTGCTGAAATGAT+TGG 0.365226 5.2:-53553217 MS.gene035877:CDS
CTTGGTGAGCCAACACTGAT+TGG 0.369399 5.2:+53553962 None:intergenic
GGTTGTGGCTATGGTAGCTT+TGG 0.380939 5.2:-53552595 MS.gene035877:CDS
AAGCAGCAGTTCAAAATTAC+TGG 0.382001 5.2:-53551668 MS.gene035877:CDS
TGAGCAGAGTCAAAATTGTT+TGG 0.393888 5.2:-53553642 MS.gene035877:CDS
ATCTGTTCATTGAAATTGAC+AGG 0.398613 5.2:-53551118 MS.gene035877:CDS
GATAGTTAGGTCCAGTTCTT+GGG 0.401757 5.2:+53551475 None:intergenic
AAGGAGACCTCAATGCTAAA+GGG 0.408924 5.2:+53554029 None:intergenic
TGGATCAAGGGAAGATAGTT+AGG 0.412196 5.2:+53551462 None:intergenic
TCAAAAGACAGAGATGGATA+TGG 0.414142 5.2:+53552442 None:intergenic
GTGCAAGATGTGGCATTGAT+TGG 0.420971 5.2:-53552408 MS.gene035877:CDS
TGCTTCAAGGTGGAAAGAAT+TGG 0.422058 5.2:-53553747 MS.gene035877:CDS
GGATGATCAGAAAATATTAC+AGG 0.422300 5.2:+53551633 None:intergenic
ATGAACGTGGTCCCAAGAAC+TGG 0.422464 5.2:-53551486 MS.gene035877:CDS
GGATATTGGTGAGATTTCTA+GGG 0.429174 5.2:-53553771 MS.gene035877:CDS
ATTGCATGTTTCTTGAAGAA+AGG 0.436409 5.2:+53550029 None:intergenic
CGGAGAAGGGTCCTCGTCAC+CGG 0.441507 5.2:+53551602 None:intergenic
GGAATCTTGTTCTCCTGAGT+TGG 0.443168 5.2:-53553726 MS.gene035877:CDS
TATGACTTGGTGCATGCAGC+AGG 0.446091 5.2:-53551188 MS.gene035877:CDS
GTCGTGTTTACCATGGTTAT+AGG 0.449066 5.2:-53553826 MS.gene035877:CDS
ACATTTCTGAACATGTTGTA+AGG 0.452439 5.2:+53551579 None:intergenic
GTTCCTCTTAGATGGCCTAC+TGG 0.452619 5.2:-53553596 MS.gene035877:CDS
GAGTCCTCACCAAGTTCATC+AGG 0.457244 5.2:+53551702 None:intergenic
CTTAGCAGCCCAGCTGAAAT+GGG 0.459246 5.2:-53550111 MS.gene035877:CDS
TTACCAGAAAGAAAGGTTCT+CGG 0.459715 5.2:-53551978 MS.gene035877:intron
TAAGTGGCTGGGAAAATTCA+AGG 0.460048 5.2:+53551156 None:intergenic
CGCCGACAAAACCACGGTCC+TGG 0.460264 5.2:+53551442 None:intergenic
GCATGGTGCACCTAAGTGGC+TGG 0.460368 5.2:+53551144 None:intergenic
TGCTGCATGCACCAAGTCAT+AGG 0.464175 5.2:+53551190 None:intergenic
TTACATAACAATACCATGTA+TGG 0.469640 5.2:+53551807 None:intergenic
TTCAATTGAAAGCCAGCGGC+GGG 0.475046 5.2:+53551879 None:intergenic
TCTTGCTTCCCATTTCAGCT+GGG 0.475890 5.2:+53550103 None:intergenic
AAAACATCATCAACTTAAAA+CGG 0.476140 5.2:+53553936 None:intergenic
AAAACCACGGTCCTGGATCA+AGG 0.477042 5.2:+53551449 None:intergenic
CTAGACATAGGTTGTGGCTA+TGG 0.482030 5.2:-53552604 MS.gene035877:CDS
CCGATGGAAATGAGTTTGAA+AGG 0.483849 5.2:-53553676 MS.gene035877:CDS
GACATGAATGCTAACTTTGG+TGG 0.484582 5.2:-53551552 MS.gene035877:CDS
AAAGGAGACCTCAATGCTAA+AGG 0.488766 5.2:+53554028 None:intergenic
GTGAAAGAAGCAATCATAGC+AGG 0.489787 5.2:+53552478 None:intergenic
ACTTTACCGAAAATCTGTGC+TGG 0.491547 5.2:-53552153 MS.gene035877:CDS
GCATCTGATCCAATCAGTGT+TGG 0.492382 5.2:-53553971 MS.gene035877:CDS
AGATTTCTAGGGGTGCTTCA+AGG 0.496300 5.2:-53553760 MS.gene035877:CDS
ATTGCAAACTATGAGCCTTC+TGG 0.503664 5.2:-53552535 MS.gene035877:CDS
CTTGAAGTCTCCTATAACCA+TGG 0.505745 5.2:+53553816 None:intergenic
AAAAGAATTGTTATACATCA+AGG 0.506775 5.2:-53552081 MS.gene035877:intron
TGCAAGATGTGGCATTGATT+GGG 0.507894 5.2:-53552407 MS.gene035877:CDS
TCTCGGCCTCTGTGTGGTAG+AGG 0.509075 5.2:-53551961 MS.gene035877:CDS
CCTTGCTTTAATGTTTCCGA+TGG 0.509748 5.2:-53553692 MS.gene035877:CDS
TGCACCAAGTCATAGGTTCT+CGG 0.510253 5.2:+53551197 None:intergenic
TCTGAAAACAACAACTTCAA+AGG 0.510267 5.2:+53554010 None:intergenic
GCACCAAGTCATAGGTTCTC+GGG 0.511240 5.2:+53551198 None:intergenic
AACATGTTGTAAGGCGGAGA+AGG 0.511703 5.2:+53551588 None:intergenic
ATCACACCCCTTTAGCATTG+AGG 0.514349 5.2:-53554036 MS.gene035877:CDS
TCTGATCATCCGAAGAGGCC+CGG 0.518115 5.2:-53551621 MS.gene035877:CDS
TCATAGGTTCTCGGGTATGT+TGG 0.521533 5.2:+53551206 None:intergenic
CCTTTCAAACTCATTTCCAT+CGG 0.521679 5.2:+53553676 None:intergenic
CAATTGCAGGATGATGATGT+TGG 0.529476 5.2:-53553302 MS.gene035877:intron
AAAACATCAATGATGATACA+TGG 0.529523 5.2:-53554117 MS.gene035877:CDS
TTGTTCAAATTTGCCCGAGA+AGG 0.530466 5.2:+53551841 None:intergenic
TCAAAATTTGACTGTCAAAG+AGG 0.532274 5.2:+53552566 None:intergenic
GAGGAACACAGACCCGCCGC+TGG 0.534244 5.2:-53551891 MS.gene035877:CDS
TTGGTGAGGACTCTGACAGC+TGG 0.536321 5.2:-53551692 MS.gene035877:CDS
GAATCTTCCTTCATACAAGC+TGG 0.538007 5.2:-53553184 MS.gene035877:CDS
GGATTGCTGCCTGATGAACT+TGG 0.541826 5.2:-53551711 MS.gene035877:CDS
AAGAATGAGTTAGCCATACA+TGG 0.548907 5.2:-53551820 MS.gene035877:intron
AATTTGTCATCTTCGTCAAG+AGG 0.549850 5.2:-53553848 MS.gene035877:CDS
TAACTATCTTCCCTTGATCC+AGG 0.552006 5.2:-53551460 MS.gene035877:CDS
TGTGTTGAAAGAGTATGTCT+AGG 0.552077 5.2:-53554177 None:intergenic
TTTCCAGTAGGCCATCTAAG+AGG 0.554429 5.2:+53553593 None:intergenic
TGTTTCCGGTACTCGTGTAC+CGG 0.556249 5.2:-53554140 MS.gene035877:CDS
CTTTACCGAAAATCTGTGCT+GGG 0.556623 5.2:-53552152 MS.gene035877:CDS
CATATGAGAGGCTGAACGAA+AGG 0.563007 5.2:+53553264 None:intergenic
TCCGAAGAGGCCCGGTGACG+AGG 0.564321 5.2:-53551613 MS.gene035877:CDS
TTAGACATGAATGCTAACTT+TGG 0.569291 5.2:-53551555 MS.gene035877:CDS
GGAGAAGGGTCCTCGTCACC+GGG 0.572769 5.2:+53551603 None:intergenic
TTCTGTGGCCTCTAGGTGCG+AGG 0.574799 5.2:-53551234 MS.gene035877:intron
TTCAATGAACAGATCAAGCA+TGG 0.580708 5.2:+53551127 None:intergenic
CATGGTGCACCTAAGTGGCT+GGG 0.582332 5.2:+53551145 None:intergenic
AAACCACGGTCCTGGATCAA+GGG 0.584929 5.2:+53551450 None:intergenic
CTTCTGGAAGCTTGACCAAG+AGG 0.586011 5.2:-53553520 MS.gene035877:intron
GCCACAACCTATGTCTAGTA+CGG 0.587892 5.2:+53552609 None:intergenic
ACAAGGAGAATCAGAAAAGG+TGG 0.588315 5.2:-53552189 MS.gene035877:CDS
ACTTACACCAGCTTGTATGA+AGG 0.590478 5.2:+53553177 None:intergenic
GGTTCTCGGGTATGTTGGAA+AGG 0.590576 5.2:+53551211 None:intergenic
CCATCGGAAACATTAAAGCA+AGG 0.593228 5.2:+53553692 None:intergenic
ATTCGAACCGTACTAGACAT+AGG 0.593344 5.2:-53552616 MS.gene035877:CDS
GTCCAAACAAAGTATCCGCC+CGG 0.594558 5.2:+53552235 None:intergenic
TCAAGCATGGTGCACCTAAG+TGG 0.595533 5.2:+53551140 None:intergenic
AACATATCAAAAGACAGAGA+TGG 0.597981 5.2:+53552436 None:intergenic
GATATTGGTGAGATTTCTAG+GGG 0.598200 5.2:-53553770 MS.gene035877:CDS
TGTGAAAATCACTGCACAAG+AGG 0.598848 5.2:-53553549 MS.gene035877:CDS
GAACTGCAAAACTGCATAGG+AGG 0.600256 5.2:-53551910 MS.gene035877:CDS
GTAACAAGGAGAATCAGAAA+AGG 0.601806 5.2:-53552192 MS.gene035877:CDS
TTGTTACGAGCATTTGTAAG+CGG 0.602642 5.2:+53552208 None:intergenic
GGCATTGATTGGGACCAGAA+AGG 0.607628 5.2:-53552397 MS.gene035877:intron
TTTCAATTGAAAGCCAGCGG+CGG 0.609031 5.2:+53551878 None:intergenic
GCTTACAAATGCTCGTAACA+AGG 0.610328 5.2:-53552206 MS.gene035877:CDS
AAACATCAATGATGATACAT+GGG 0.612157 5.2:-53554116 MS.gene035877:CDS
TCAAGAGGTCGTGTTTACCA+TGG 0.613690 5.2:-53553833 MS.gene035877:CDS
CGCGAACTGCAAAACTGCAT+AGG 0.617218 5.2:-53551913 MS.gene035877:CDS
ACATGTTGTAAGGCGGAGAA+GGG 0.618483 5.2:+53551589 None:intergenic
AGCTGAACTTGATTACCAGA+AGG 0.619211 5.2:+53552520 None:intergenic
GGAACTTTGTAATTAACTGG+TGG 0.627180 5.2:+53553614 None:intergenic
CCGGAAACACCTCGATGCAG+AGG 0.627852 5.2:+53554154 None:intergenic
AGGAGACCTCAATGCTAAAG+GGG 0.629846 5.2:+53554030 None:intergenic
AACTCCATCAAACATATGAG+AGG 0.634768 5.2:+53553252 None:intergenic
ATACCCGAGAACCTATGACT+TGG 0.638261 5.2:-53551201 MS.gene035877:CDS
TTTCTAGGGGTGCTTCAAGG+TGG 0.639200 5.2:-53553757 MS.gene035877:CDS
CTTCCCTTGATCCAGGACCG+TGG 0.639212 5.2:-53551453 MS.gene035877:CDS
AAGTGGCTGGGAAAATTCAA+GGG 0.642516 5.2:+53551157 None:intergenic
GCTGCCTGATGAACTTGGTG+AGG 0.645687 5.2:-53551706 MS.gene035877:CDS
ACCGTACTAGACATAGGTTG+TGG 0.648823 5.2:-53552610 MS.gene035877:CDS
ATGACTTGGTGCATGCAGCA+GGG 0.652344 5.2:-53551187 MS.gene035877:CDS
GTTCAGCTTACTCTTGAGCG+AGG 0.669560 5.2:-53552505 MS.gene035877:CDS
CAGAAAATATTACAGGCGAG+AGG 0.671589 5.2:+53551640 None:intergenic
ATGTTACATTGTGCAAGATG+TGG 0.674130 5.2:-53552418 MS.gene035877:CDS
TGACAGGTTACTTCGCCCAG+AGG 0.677454 5.2:-53551102 MS.gene035877:intron
TTTCTGAACATGTTGTAAGG+CGG 0.677618 5.2:+53551582 None:intergenic
ACGAGCATTTGTAAGCGGTG+AGG 0.680282 5.2:+53552213 None:intergenic
GTGTGGTAGAGGTCTCGATG+TGG 0.680404 5.2:-53551950 MS.gene035877:CDS
AAAGGTTCTCGGCCTCTGTG+TGG 0.681665 5.2:-53551967 MS.gene035877:CDS
GCAAAACGCCGACAAAACCA+CGG 0.693581 5.2:+53551436 None:intergenic
GCAAGCTAGAAAGTCTGTGT+GGG 0.695074 5.2:-53551511 MS.gene035877:CDS
TGCAAGCTAGAAAGTCTGTG+TGG 0.704131 5.2:-53551512 MS.gene035877:CDS
ATGTCTAGGCCTCTGCATCG+AGG 0.707696 5.2:-53554163 MS.gene035877:CDS
CGAAATCGAAAGTAACAGCG+AGG 0.717535 5.2:-53550075 MS.gene035877:CDS
GTCTGTGTGGGTAATGAACG+TGG 0.718175 5.2:-53551499 MS.gene035877:CDS
TCGAGACCTCTACCACACAG+AGG 0.789724 5.2:+53551955 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATATAAATAAATAAAAGGAA+AGG + chr5.2:53553152-53553171 None:intergenic 10.0%
!!! CATGATATTTTATAAAATTT+TGG + chr5.2:53553661-53553680 None:intergenic 10.0%
! GGGGGGGGGGGGGGGGGGGG+GGG - chr5.2:53551170-53551189 MS.gene035877:CDS 100.0%
!! ATTATATAGTTATTATCTAC+AGG + chr5.2:53551347-53551366 None:intergenic 15.0%
!! TTATATAGTTATTATCTACA+GGG + chr5.2:53551346-53551365 None:intergenic 15.0%
!!! AAAGTTACTTTAAATAATTG+AGG - chr5.2:53553191-53553210 MS.gene035877:CDS 15.0%
!!! AAATTTTTCTTATTGCTATT+AGG - chr5.2:53552456-53552475 MS.gene035877:CDS 15.0%
!!! AAGTTACTTTAAATAATTGA+GGG - chr5.2:53553192-53553211 MS.gene035877:CDS 15.0%
!!! AATTAACATTTTTATCTAAG+TGG - chr5.2:53553895-53553914 MS.gene035877:CDS 15.0%
!!! ATAAAATTTTGGTAAAAGTA+AGG + chr5.2:53553650-53553669 None:intergenic 15.0%
!!! ATTAACATTTTTATCTAAGT+GGG - chr5.2:53553896-53553915 MS.gene035877:CDS 15.0%
!!! TAAAATTTTGGTAAAAGTAA+GGG + chr5.2:53553649-53553668 None:intergenic 15.0%
!! AAAACATCATCAACTTAAAA+CGG + chr5.2:53550255-53550274 None:intergenic 20.0%
!! AAAAGAATTGTTATACATCA+AGG - chr5.2:53552107-53552126 MS.gene035877:CDS 20.0%
!! AATAAAACATTAAATCACCA+AGG + chr5.2:53552848-53552867 None:intergenic 20.0%
!! AATAAATAAAAGGAAAGGAA+TGG + chr5.2:53553147-53553166 None:intergenic 20.0%
!! ACACTAAATATCTAATTTCA+GGG + chr5.2:53553800-53553819 None:intergenic 20.0%
!! ATAAAACATTAAATCACCAA+GGG + chr5.2:53552847-53552866 None:intergenic 20.0%
!! TATCAATCAAACAACATTTA+AGG + chr5.2:53551527-53551546 None:intergenic 20.0%
!! TATGTGATCTTAATTGAAAT+TGG - chr5.2:53551039-53551058 MS.gene035877:intron 20.0%
!! TATTAAATTTACATACCTCT+GGG + chr5.2:53553104-53553123 None:intergenic 20.0%
!! TTAGATATTTAGTGTCTATT+TGG - chr5.2:53553805-53553824 MS.gene035877:CDS 20.0%
!! TTATTAAATTTACATACCTC+TGG + chr5.2:53553105-53553124 None:intergenic 20.0%
!! TTGAAACATTTCAAAATGTT+TGG - chr5.2:53553320-53553339 MS.gene035877:intron 20.0%
!!! AAAAAGATGATTTTGATAGA+AGG - chr5.2:53550119-53550138 MS.gene035877:CDS 20.0%
!!! AAAAGATGATTTTGATAGAA+GGG - chr5.2:53550120-53550139 MS.gene035877:CDS 20.0%
!!! AGGATCTAAATTTTTTTATC+TGG - chr5.2:53551825-53551844 MS.gene035877:CDS 20.0%
!!! ATCTTTTTCTGATTTATCTT+TGG + chr5.2:53550107-53550126 None:intergenic 20.0%
!!! CAATTATAATCATTTTTCTG+TGG - chr5.2:53552939-53552958 MS.gene035877:intron 20.0%
!!! CTTCTGAAGTTTTTTATTTT+AGG - chr5.2:53553550-53553569 MS.gene035877:CDS 20.0%
!!! TATTTAAAGTAACTTTTCTC+AGG + chr5.2:53553187-53553206 None:intergenic 20.0%
!!! TGCGTTAATTTTTTTTTTTC+CGG - chr5.2:53551078-53551097 MS.gene035877:intron 20.0%
!!! TGTGATAGTGAATTTATTTT+AGG + chr5.2:53553442-53553461 None:intergenic 20.0%
!!! TTAACATTTTTATCTAAGTG+GGG - chr5.2:53553897-53553916 MS.gene035877:CDS 20.0%
!!! TTACTCTTGATTTTATCATT+TGG - chr5.2:53553966-53553985 MS.gene035877:CDS 20.0%
!!! TTTTAAGTTGATGATGTTTT+TGG - chr5.2:53550255-53550274 MS.gene035877:intron 20.0%
!!! TTTTGACTTTTGATAGATTT+TGG - chr5.2:53551455-53551474 MS.gene035877:CDS 20.0%
! AAAACATCAATGATGATACA+TGG - chr5.2:53550071-53550090 MS.gene035877:CDS 25.0%
! AAACATCAATGATGATACAT+GGG - chr5.2:53550072-53550091 MS.gene035877:CDS 25.0%
! AACAGGTAATACTAAGAATT+AGG + chr5.2:53552186-53552205 None:intergenic 25.0%
! ACAGGTAATACTAAGAATTA+GGG + chr5.2:53552185-53552204 None:intergenic 25.0%
! AGTTTGTCAAATAAATCTCA+TGG + chr5.2:53553855-53553874 None:intergenic 25.0%
! CAATTGAAAAAAGGGAAAAA+TGG - chr5.2:53552324-53552343 MS.gene035877:intron 25.0%
! GACACTAAATATCTAATTTC+AGG + chr5.2:53553801-53553820 None:intergenic 25.0%
! GATTTAACACAGCAAAATTA+TGG + chr5.2:53551859-53551878 None:intergenic 25.0%
! GTATTTATACTTCACGTATT+TGG - chr5.2:53551116-53551135 MS.gene035877:CDS 25.0%
! TACGTGAAGTATAAATACAA+CGG + chr5.2:53551114-53551133 None:intergenic 25.0%
! TATGTAACTTCTGTTCTTTA+TGG - chr5.2:53552397-53552416 MS.gene035877:intron 25.0%
! TCCTTACACTTAACAAATTT+AGG - chr5.2:53553828-53553847 MS.gene035877:CDS 25.0%
! TTACATAACAATACCATGTA+TGG + chr5.2:53552384-53552403 None:intergenic 25.0%
!! ATCAAACAACATTTAAGGTA+AGG + chr5.2:53551522-53551541 None:intergenic 25.0%
!! GTTTTTATTACCAGAAAGAA+AGG - chr5.2:53552203-53552222 MS.gene035877:CDS 25.0%
!! TAACATTTTTATCTAAGTGG+GGG - chr5.2:53553898-53553917 MS.gene035877:CDS 25.0%
!! TACTGGAAAAGATGTTATTT+GGG - chr5.2:53550609-53550628 MS.gene035877:intron 25.0%
!! TCTTGATTTTATCATTTGGA+AGG - chr5.2:53553970-53553989 MS.gene035877:CDS 25.0%
!! TGCAAAGATGTATTGATATA+AGG - chr5.2:53553217-53553236 MS.gene035877:CDS 25.0%
!! TTCTTTCTGGTAATAAAAAC+AGG + chr5.2:53552203-53552222 None:intergenic 25.0%
!! TTGTTTTCAGATAAAGAGAA+TGG - chr5.2:53550190-53550209 MS.gene035877:intron 25.0%
!!! AAAGATGATTTTGATAGAAG+GGG - chr5.2:53550121-53550140 MS.gene035877:CDS 25.0%
!!! ACTATCACATCAGATTTTTT+GGG - chr5.2:53553453-53553472 MS.gene035877:intron 25.0%
!!! GTTAATTTTTTTTTTTCCGG+TGG - chr5.2:53551081-53551100 MS.gene035877:intron 25.0%
!!! TCCTAAATTTGTTAAGTGTA+AGG + chr5.2:53553832-53553851 None:intergenic 25.0%
!!! TTTATTTTTCCACTTACCTT+TGG - chr5.2:53552862-53552881 MS.gene035877:intron 25.0%
!!! TTTTGTTTTATCCAAGAAAC+AGG + chr5.2:53553299-53553318 None:intergenic 25.0%
!!! TTTTTTTTCCTTTCAATTGC+AGG - chr5.2:53550873-53550892 MS.gene035877:intron 25.0%
AACATATCAAAAGACAGAGA+TGG + chr5.2:53551755-53551774 None:intergenic 30.0%
AAGAATTAGGGTTACACAAA+AGG + chr5.2:53552173-53552192 None:intergenic 30.0%
ACATTTCTGAACATGTTGTA+AGG + chr5.2:53552612-53552631 None:intergenic 30.0%
ACTTTCTGATAACATAACAG+AGG + chr5.2:53553727-53553746 None:intergenic 30.0%
AGAATTAGGGTTACACAAAA+GGG + chr5.2:53552172-53552191 None:intergenic 30.0%
AGAGGAACTTTGTAATTAAC+TGG + chr5.2:53550580-53550599 None:intergenic 30.0%
ATAAGTACATCATGTAAAGC+AGG + chr5.2:53552137-53552156 None:intergenic 30.0%
ATCTGTTCATTGAAATTGAC+AGG - chr5.2:53553070-53553089 MS.gene035877:intron 30.0%
ATTACAAAGTTCCTCTTAGA+TGG - chr5.2:53550584-53550603 MS.gene035877:intron 30.0%
ATTGCATGTTTCTTGAAGAA+AGG + chr5.2:53554162-53554181 None:intergenic 30.0%
CAATTTAGCCTCTAAATTAC+AGG + chr5.2:53553595-53553614 None:intergenic 30.0%
CTACTGGAAAAGATGTTATT+TGG - chr5.2:53550608-53550627 MS.gene035877:intron 30.0%
CTGTAATTTAGAGGCTAAAT+TGG - chr5.2:53553593-53553612 MS.gene035877:CDS 30.0%
CTTTCTGATAACATAACAGA+GGG + chr5.2:53553726-53553745 None:intergenic 30.0%
GGATGATCAGAAAATATTAC+AGG + chr5.2:53552558-53552577 None:intergenic 30.0%
TAATTGACAACCACATTATG+TGG - chr5.2:53551887-53551906 MS.gene035877:CDS 30.0%
TCAAAATTTGACTGTCAAAG+AGG + chr5.2:53551625-53551644 None:intergenic 30.0%
TCAAGAAACATGCAATCTAA+AGG - chr5.2:53554166-53554185 MS.gene035877:CDS 30.0%
TCTGAAAACAACAACTTCAA+AGG + chr5.2:53550181-53550200 None:intergenic 30.0%
TTAGACATGAATGCTAACTT+TGG - chr5.2:53552633-53552652 MS.gene035877:intron 30.0%
! AATTTTGTACTCGAAATCGT+AGG - chr5.2:53553370-53553389 MS.gene035877:intron 30.0%
! ACAAACTTTCTGAAAAGTGA+GGG - chr5.2:53553868-53553887 MS.gene035877:CDS 30.0%
! ACTCTAGCTGATTCTATTAA+AGG + chr5.2:53554057-53554076 None:intergenic 30.0%
! CAAATAACATCTTTTCCAGT+AGG + chr5.2:53550610-53550629 None:intergenic 30.0%
! CTGGCTTTCAATTGAAAAAA+GGG - chr5.2:53552316-53552335 MS.gene035877:intron 30.0%
! GAAACTTGTTTCAGATTTGT+TGG - chr5.2:53550396-53550415 MS.gene035877:intron 30.0%
! GTATCATCATTGATGTTTTC+CGG + chr5.2:53550070-53550089 None:intergenic 30.0%
!! GTTTCAGATTTGTTGGATAT+TGG - chr5.2:53550403-53550422 MS.gene035877:intron 30.0%
!!! ATAGTTGTTTTTGCTCTTGT+TGG - chr5.2:53550298-53550317 MS.gene035877:intron 30.0%
!!! ATGAACTTTTTTGCTAAGTG+AGG + chr5.2:53553694-53553713 None:intergenic 30.0%
!!! CACTATCACATCAGATTTTT+TGG - chr5.2:53553452-53553471 MS.gene035877:intron 30.0%
!!! TGAACTTTTTTGCTAAGTGA+GGG + chr5.2:53553693-53553712 None:intergenic 30.0%
!!! TTTTAGCTTGTACTTTGTTC+TGG - chr5.2:53551395-53551414 MS.gene035877:intron 30.0%
!!! TTTTTTCAATTGAAAGCCAG+CGG + chr5.2:53552316-53552335 None:intergenic 30.0%
AACTCCATCAAACATATGAG+AGG + chr5.2:53550939-53550958 None:intergenic 35.0%
AAGAATGAGTTAGCCATACA+TGG - chr5.2:53552368-53552387 MS.gene035877:intron 35.0%
AAGCAGCAGTTCAAAATTAC+TGG - chr5.2:53552520-53552539 MS.gene035877:CDS 35.0%
AATTTGTCATCTTCGTCAAG+AGG - chr5.2:53550340-53550359 MS.gene035877:intron 35.0%
ACCACATTATGTGGAATAGA+TGG - chr5.2:53551896-53551915 MS.gene035877:CDS 35.0%
ATCAACTTAAAACGGCTTCT+TGG + chr5.2:53550247-53550266 None:intergenic 35.0%
ATCATCATCCTGCAATTGAA+AGG + chr5.2:53550884-53550903 None:intergenic 35.0%
ATGTTACATTGTGCAAGATG+TGG - chr5.2:53551770-53551789 MS.gene035877:intron 35.0%
ATGTTGGGTTCAACGTATAT+AGG - chr5.2:53551149-53551168 MS.gene035877:CDS 35.0%
CACATATTCCAGCAATATAC+AGG + chr5.2:53550751-53550770 None:intergenic 35.0%
CATCAGATTGCTGAAATGAT+TGG - chr5.2:53550971-53550990 MS.gene035877:intron 35.0%
CCTAAACTCAAATACCTTTC+TGG + chr5.2:53551808-53551827 None:intergenic 35.0%
CCTTTCAAACTCATTTCCAT+CGG + chr5.2:53550515-53550534 None:intergenic 35.0%
CTGTATATTGCTGGAATATG+TGG - chr5.2:53550749-53550768 MS.gene035877:intron 35.0%
GAAAGTTTGTCATGTCAGAT+TGG - chr5.2:53553741-53553760 MS.gene035877:CDS 35.0%
GGAACTTTGTAATTAACTGG+TGG + chr5.2:53550577-53550596 None:intergenic 35.0%
GGATATTGGTGAGATTTCTA+GGG - chr5.2:53550417-53550436 MS.gene035877:intron 35.0%
GTAACAAGGAGAATCAGAAA+AGG - chr5.2:53551996-53552015 MS.gene035877:intron 35.0%
GTTTCTTGAAGAAAGGTTTC+TGG + chr5.2:53554155-53554174 None:intergenic 35.0%
TAAAAGTAAGGGACCAAGTT+GGG + chr5.2:53553638-53553657 None:intergenic 35.0%
TACCACCTAAAATTGTGTCT+GGG - chr5.2:53553486-53553505 MS.gene035877:intron 35.0%
TCAAAAGACAGAGATGGATA+TGG + chr5.2:53551749-53551768 None:intergenic 35.0%
TGAGCAGAGTCAAAATTGTT+TGG - chr5.2:53550546-53550565 MS.gene035877:intron 35.0%
TGGATATTGGTGAGATTTCT+AGG - chr5.2:53550416-53550435 MS.gene035877:intron 35.0%
TGTTGGGTTCAACGTATATA+GGG - chr5.2:53551150-53551169 MS.gene035877:CDS 35.0%
TTACCACCTAAAATTGTGTC+TGG - chr5.2:53553485-53553504 MS.gene035877:intron 35.0%
TTACCAGAAAGAAAGGTTCT+CGG - chr5.2:53552210-53552229 MS.gene035877:CDS 35.0%
TTCAATGAACAGATCAAGCA+TGG + chr5.2:53553064-53553083 None:intergenic 35.0%
TTGTTACGAGCATTTGTAAG+CGG + chr5.2:53551983-53552002 None:intergenic 35.0%
TTTCTGAACATGTTGTAAGG+CGG + chr5.2:53552609-53552628 None:intergenic 35.0%
! AGTAACTTTTCTCAGGAAAC+AGG + chr5.2:53553180-53553199 None:intergenic 35.0%
! GACAAACTTTCTGAAAAGTG+AGG - chr5.2:53553867-53553886 MS.gene035877:CDS 35.0%
! GATATTGGTGAGATTTCTAG+GGG - chr5.2:53550418-53550437 MS.gene035877:intron 35.0%
! GGAACAAAATTTTCCAACTC+AGG + chr5.2:53550478-53550497 None:intergenic 35.0%
! TATTTTCTGATCATCCGAAG+AGG - chr5.2:53552562-53552581 MS.gene035877:CDS 35.0%
! TTTTGCAGTTCGCGATAATA+TGG + chr5.2:53552269-53552288 None:intergenic 35.0%
!! CCAGAAAGGTATTTGAGTTT+AGG - chr5.2:53551805-53551824 MS.gene035877:intron 35.0%
!! GCTGGCTTTCAATTGAAAAA+AGG - chr5.2:53552315-53552334 MS.gene035877:intron 35.0%
!!! AGCTGATAGACTTTTAAGAC+CGG - chr5.2:53551934-53551953 MS.gene035877:CDS 35.0%
!!! CTCTTGTTGGATCTTTTTTG+TGG - chr5.2:53550311-53550330 MS.gene035877:intron 35.0%
AAAGGAGACCTCAATGCTAA+AGG + chr5.2:53550163-53550182 None:intergenic 40.0%
AAAGGGAAAAATGGCCTTCT+CGG - chr5.2:53552333-53552352 MS.gene035877:intron 40.0%
AAGGAGACCTCAATGCTAAA+GGG + chr5.2:53550162-53550181 None:intergenic 40.0%
AAGTGGCTGGGAAAATTCAA+GGG + chr5.2:53553034-53553053 None:intergenic 40.0%
AATACCCACAATTACGGTTG+CGG - chr5.2:53550809-53550828 MS.gene035877:intron 40.0%
AATATCCGCAACCGTAATTG+TGG + chr5.2:53550817-53550836 None:intergenic 40.0%
AATCTTGTCTAGCATATGCC+AGG + chr5.2:53552823-53552842 None:intergenic 40.0%
ACAAGGAGAATCAGAAAAGG+TGG - chr5.2:53551999-53552018 MS.gene035877:intron 40.0%
ACTCTTTGAATTGCCCAACT+TGG - chr5.2:53553622-53553641 MS.gene035877:CDS 40.0%
ACTTACACCAGCTTGTATGA+AGG + chr5.2:53551014-53551033 None:intergenic 40.0%
ACTTTACCGAAAATCTGTGC+TGG - chr5.2:53552035-53552054 MS.gene035877:intron 40.0%
AGATAGTTAGGTCCAGTTCT+TGG + chr5.2:53552717-53552736 None:intergenic 40.0%
AGCTGAACTTGATTACCAGA+AGG + chr5.2:53551671-53551690 None:intergenic 40.0%
ATACTCCGTGTGTAATTCCA+GGG + chr5.2:53553768-53553787 None:intergenic 40.0%
ATATCCGCAACCGTAATTGT+GGG + chr5.2:53550816-53550835 None:intergenic 40.0%
ATCTTGTCTAGCATATGCCA+GGG + chr5.2:53552822-53552841 None:intergenic 40.0%
ATGCTAGACAAGATTTCCCT+TGG - chr5.2:53552828-53552847 MS.gene035877:intron 40.0%
ATTCGAACCGTACTAGACAT+AGG - chr5.2:53551572-53551591 MS.gene035877:CDS 40.0%
ATTGCAAACTATGAGCCTTC+TGG - chr5.2:53551653-53551672 MS.gene035877:CDS 40.0%
ATTTGGTACACACTGGATGT+TGG - chr5.2:53551133-53551152 MS.gene035877:CDS 40.0%
CAATATGGACCAAGACATGA+CGG + chr5.2:53551312-53551331 None:intergenic 40.0%
CAGAAAATATTACAGGCGAG+AGG + chr5.2:53552551-53552570 None:intergenic 40.0%
CATCAAAAACCGTCATGTCT+TGG - chr5.2:53551300-53551319 MS.gene035877:intron 40.0%
CCATCGGAAACATTAAAGCA+AGG + chr5.2:53550499-53550518 None:intergenic 40.0%
CCGATGGAAATGAGTTTGAA+AGG - chr5.2:53550512-53550531 MS.gene035877:intron 40.0%
CCTTGCTTTAATGTTTCCGA+TGG - chr5.2:53550496-53550515 MS.gene035877:intron 40.0%
CTTGAAGTCTCCTATAACCA+TGG + chr5.2:53550375-53550394 None:intergenic 40.0%
CTTTACCGAAAATCTGTGCT+GGG - chr5.2:53552036-53552055 MS.gene035877:intron 40.0%
GAATCTTCCTTCATACAAGC+TGG - chr5.2:53551004-53551023 MS.gene035877:intron 40.0%
GACACATGTTAGTTACCTCT+TGG + chr5.2:53550686-53550705 None:intergenic 40.0%
GACATGAATGCTAACTTTGG+TGG - chr5.2:53552636-53552655 MS.gene035877:intron 40.0%
GATAGTTAGGTCCAGTTCTT+GGG + chr5.2:53552716-53552735 None:intergenic 40.0%
GCCATCTATTCCACATAATG+TGG + chr5.2:53551900-53551919 None:intergenic 40.0%
GCTTACAAATGCTCGTAACA+AGG - chr5.2:53551982-53552001 MS.gene035877:intron 40.0%
GGAATCCATATAAGGACAAG+AGG + chr5.2:53552801-53552820 None:intergenic 40.0%
GGTTCGAATCTGGAAATTTC+AGG + chr5.2:53551561-53551580 None:intergenic 40.0%
GTAAAAGTAAGGGACCAAGT+TGG + chr5.2:53553639-53553658 None:intergenic 40.0%
GTCGTGTTTACCATGGTTAT+AGG - chr5.2:53550362-53550381 MS.gene035877:intron 40.0%
GTGAAAGAAGCAATCATAGC+AGG + chr5.2:53551713-53551732 None:intergenic 40.0%
GTTGCCAATACCCACAATTA+CGG - chr5.2:53550803-53550822 MS.gene035877:intron 40.0%
GTTGGGTTCAACGTATATAG+GGG - chr5.2:53551151-53551170 MS.gene035877:CDS 40.0%
TAACTATCTTCCCTTGATCC+AGG - chr5.2:53552728-53552747 MS.gene035877:intron 40.0%
TAAGTGGCTGGGAAAATTCA+AGG + chr5.2:53553035-53553054 None:intergenic 40.0%
TAGTAGTCGCAGTTACAGTT+TGG - chr5.2:53551217-53551236 MS.gene035877:CDS 40.0%
TATGCCAGGGAATCCATATA+AGG + chr5.2:53552809-53552828 None:intergenic 40.0%
TCAGCCTCTCATATGTTTGA+TGG - chr5.2:53550932-53550951 MS.gene035877:intron 40.0%
TCATGTCTTGGTCCATATTG+TGG - chr5.2:53551312-53551331 MS.gene035877:intron 40.0%
TCCATATAAGGACAAGAGGA+AGG + chr5.2:53552797-53552816 None:intergenic 40.0%
TCCTTCCTCTTGTCCTTATA+TGG - chr5.2:53552793-53552812 MS.gene035877:intron 40.0%
TCTTCAAGACTCTAAGCCAA+AGG + chr5.2:53552881-53552900 None:intergenic 40.0%
TGCTGTAAATGTGGTCTGTA+TGG - chr5.2:53553263-53553282 MS.gene035877:CDS 40.0%
TGCTTCAAGGTGGAAAGAAT+TGG - chr5.2:53550441-53550460 MS.gene035877:intron 40.0%
TGGATCAAGGGAAGATAGTT+AGG + chr5.2:53552729-53552748 None:intergenic 40.0%
TGTGAAAATCACTGCACAAG+AGG - chr5.2:53550639-53550658 MS.gene035877:intron 40.0%
TTACACACGGAGTATGAAGT+TGG - chr5.2:53553773-53553792 MS.gene035877:CDS 40.0%
TTCACGTATTTGGTACACAC+TGG - chr5.2:53551126-53551145 MS.gene035877:CDS 40.0%
TTGGGTTCAACGTATATAGG+GGG - chr5.2:53551152-53551171 MS.gene035877:CDS 40.0%
TTGTCCTTATATGGATTCCC+TGG - chr5.2:53552802-53552821 MS.gene035877:intron 40.0%
TTGTTCAAATTTGCCCGAGA+AGG + chr5.2:53552350-53552369 None:intergenic 40.0%
TTTGCCAGCATGTGTCAATT+TGG + chr5.2:53553925-53553944 None:intergenic 40.0%
TTTGGTACACACTGGATGTT+GGG - chr5.2:53551134-53551153 MS.gene035877:CDS 40.0%
! AGTCTCCCAGACACAATTTT+AGG + chr5.2:53553494-53553513 None:intergenic 40.0%
! CAATTGCAGGATGATGATGT+TGG - chr5.2:53550886-53550905 MS.gene035877:intron 40.0%
! TTGAATTTTCCCAGCCACTT+AGG - chr5.2:53553034-53553053 MS.gene035877:intron 40.0%
!! AGAAAGGTTTCTGGCATATC+AGG + chr5.2:53554146-53554165 None:intergenic 40.0%
!! ATCATTTTTCTGTGGCCTCT+AGG - chr5.2:53552947-53552966 MS.gene035877:intron 40.0%
!! TGCAAGATGTGGCATTGATT+GGG - chr5.2:53551781-53551800 MS.gene035877:intron 40.0%
!!! GCTGATAGACTTTTAAGACC+GGG - chr5.2:53551935-53551954 MS.gene035877:CDS 40.0%
AACATGTTGTAAGGCGGAGA+AGG + chr5.2:53552603-53552622 None:intergenic 45.0%
AACTTCGTAACTGCGTTACG+CGG - chr5.2:53550721-53550740 MS.gene035877:intron 45.0%
AAGGGAAAAATGGCCTTCTC+GGG - chr5.2:53552334-53552353 MS.gene035877:intron 45.0%
ACATGTTGTAAGGCGGAGAA+GGG + chr5.2:53552602-53552621 None:intergenic 45.0%
ACCGTACTAGACATAGGTTG+TGG - chr5.2:53551578-53551597 MS.gene035877:CDS 45.0%
AGGAGACCTCAATGCTAAAG+GGG + chr5.2:53550161-53550180 None:intergenic 45.0%
AGGGTTTGCCAACCACAATA+TGG + chr5.2:53551327-53551346 None:intergenic 45.0%
ATACAACGGAGAAAGACCAC+CGG + chr5.2:53551100-53551119 None:intergenic 45.0%
ATACCCGAGAACCTATGACT+TGG - chr5.2:53552987-53553006 MS.gene035877:intron 45.0%
ATCACACCCCTTTAGCATTG+AGG - chr5.2:53550152-53550171 MS.gene035877:CDS 45.0%
CAGACCACATTTACAGCAGT+CGG + chr5.2:53553261-53553280 None:intergenic 45.0%
CATACTCCGTGTGTAATTCC+AGG + chr5.2:53553769-53553788 None:intergenic 45.0%
CATATGAGAGGCTGAACGAA+AGG + chr5.2:53550927-53550946 None:intergenic 45.0%
CGAAATCGAAAGTAACAGCG+AGG - chr5.2:53554113-53554132 MS.gene035877:CDS 45.0%
CTAGACATAGGTTGTGGCTA+TGG - chr5.2:53551584-53551603 MS.gene035877:CDS 45.0%
GAACTGCAAAACTGCATAGG+AGG - chr5.2:53552278-53552297 MS.gene035877:intron 45.0%
GACTCTAAGCCAAAGGTAAG+TGG + chr5.2:53552874-53552893 None:intergenic 45.0%
GCAACCGTAATTGTGGGTAT+TGG + chr5.2:53550810-53550829 None:intergenic 45.0%
GCAAGCTAGAAAGTCTGTGT+GGG - chr5.2:53552677-53552696 MS.gene035877:intron 45.0%
GCACAAGAGGTTCTTTCTTC+TGG - chr5.2:53550652-53550671 MS.gene035877:intron 45.0%
GCATCTGATCCAATCAGTGT+TGG - chr5.2:53550217-53550236 MS.gene035877:intron 45.0%
GCCACAACCTATGTCTAGTA+CGG + chr5.2:53551582-53551601 None:intergenic 45.0%
GGAATCTTGTTCTCCTGAGT+TGG - chr5.2:53550462-53550481 MS.gene035877:intron 45.0%
GTCTTGGTCCATATTGTGGT+TGG - chr5.2:53551316-53551335 MS.gene035877:intron 45.0%
GTGCGACTCCTGTAATTTAG+AGG - chr5.2:53553584-53553603 MS.gene035877:CDS 45.0%
TCAAGAGGTCGTGTTTACCA+TGG - chr5.2:53550355-53550374 MS.gene035877:intron 45.0%
TCATAGGTTCTCGGGTATGT+TGG + chr5.2:53552985-53553004 None:intergenic 45.0%
TCTTGCTTCCCATTTCAGCT+GGG + chr5.2:53554088-53554107 None:intergenic 45.0%
TGCAAGCTAGAAAGTCTGTG+TGG - chr5.2:53552676-53552695 MS.gene035877:intron 45.0%
TGCACCAAGTCATAGGTTCT+CGG + chr5.2:53552994-53553013 None:intergenic 45.0%
TGGGTTCAACGTATATAGGG+GGG - chr5.2:53551153-53551172 MS.gene035877:CDS 45.0%
TGTCTAGTACGGTTCGAATC+TGG + chr5.2:53551571-53551590 None:intergenic 45.0%
TTGGTCCCTGGAATTACACA+CGG - chr5.2:53553760-53553779 MS.gene035877:CDS 45.0%
TTTCAATTGAAAGCCAGCGG+CGG + chr5.2:53552313-53552332 None:intergenic 45.0%
TTTCCAGTAGGCCATCTAAG+AGG + chr5.2:53550598-53550617 None:intergenic 45.0%
! AACTCAATCGCTGTTGCTTG+CGG - chr5.2:53551268-53551287 MS.gene035877:intron 45.0%
! CATGTCCCAGCACAGATTTT+CGG + chr5.2:53552044-53552063 None:intergenic 45.0%
! CTCCCAGACACAATTTTAGG+TGG + chr5.2:53553491-53553510 None:intergenic 45.0%
! TGTGGTCTGTATGGTGATGT+CGG - chr5.2:53553272-53553291 MS.gene035877:CDS 45.0%
! TTGTCGGCGTTTTGCATGAT+TGG - chr5.2:53552760-53552779 MS.gene035877:intron 45.0%
!! AGATTTCTAGGGGTGCTTCA+AGG - chr5.2:53550428-53550447 MS.gene035877:intron 45.0%
!! GTGCAAGATGTGGCATTGAT+TGG - chr5.2:53551780-53551799 MS.gene035877:intron 45.0%
!! TGTACCGACTGCTGTAAATG+TGG - chr5.2:53553254-53553273 MS.gene035877:CDS 45.0%
!!! GATAGACTTTTAAGACCGGG+CGG - chr5.2:53551938-53551957 MS.gene035877:CDS 45.0%
!! TGAATATATAAATAAATAAA+AGG + chr5.2:53553157-53553176 None:intergenic 5.0%
AAAACCACGGTCCTGGATCA+AGG + chr5.2:53552742-53552761 None:intergenic 50.0%
AAACCACGGTCCTGGATCAA+GGG + chr5.2:53552741-53552760 None:intergenic 50.0%
ACGAGCATTTGTAAGCGGTG+AGG + chr5.2:53551978-53551997 None:intergenic 50.0%
AGCAGTCGGTACACAACAGA+AGG + chr5.2:53553247-53553266 None:intergenic 50.0%
AGGCCGAGAACCTTTCTTTC+TGG + chr5.2:53552216-53552235 None:intergenic 50.0%
ATGAACGTGGTCCCAAGAAC+TGG - chr5.2:53552702-53552721 MS.gene035877:intron 50.0%
CGCGAACTGCAAAACTGCAT+AGG - chr5.2:53552275-53552294 MS.gene035877:CDS 50.0%
CTCTTGCTTCCCATTTCAGC+TGG + chr5.2:53554089-53554108 None:intergenic 50.0%
CTGGAATATGTGGCTGATGC+AGG - chr5.2:53550759-53550778 MS.gene035877:intron 50.0%
CTTAGCAGCCCAGCTGAAAT+GGG - chr5.2:53554077-53554096 MS.gene035877:CDS 50.0%
CTTGGTGAGCCAACACTGAT+TGG + chr5.2:53550229-53550248 None:intergenic 50.0%
GACACATGCTGGCAAAGTGA+GGG - chr5.2:53553929-53553948 MS.gene035877:CDS 50.0%
GAGTCCTCACCAAGTTCATC+AGG + chr5.2:53552489-53552508 None:intergenic 50.0%
GCAAAACGCCGACAAAACCA+CGG + chr5.2:53552755-53552774 None:intergenic 50.0%
GCACCAAGTCATAGGTTCTC+GGG + chr5.2:53552993-53553012 None:intergenic 50.0%
GCAGTCGGTACACAACAGAA+GGG + chr5.2:53553246-53553265 None:intergenic 50.0%
GCGGAGAACCTGTATATTGC+TGG - chr5.2:53550740-53550759 MS.gene035877:intron 50.0%
GGATTGCTGCCTGATGAACT+TGG - chr5.2:53552477-53552496 MS.gene035877:CDS 50.0%
GGCAAAGTGAGGGACTAAGT+TGG - chr5.2:53553939-53553958 MS.gene035877:CDS 50.0%
GGGACCAAATTGACACATGC+TGG - chr5.2:53553918-53553937 MS.gene035877:CDS 50.0%
GGGTTCAACGTATATAGGGG+GGG - chr5.2:53551154-53551173 MS.gene035877:CDS 50.0%
GGTTCAACGTATATAGGGGG+GGG - chr5.2:53551155-53551174 MS.gene035877:CDS 50.0%
GGTTCTCGGGTATGTTGGAA+AGG + chr5.2:53552980-53552999 None:intergenic 50.0%
GGTTGTGGCTATGGTAGCTT+TGG - chr5.2:53551593-53551612 MS.gene035877:CDS 50.0%
GTCTGTGTGGGTAATGAACG+TGG - chr5.2:53552689-53552708 MS.gene035877:intron 50.0%
GTTCAACGTATATAGGGGGG+GGG - chr5.2:53551156-53551175 MS.gene035877:CDS 50.0%
GTTCAGCTTACTCTTGAGCG+AGG - chr5.2:53551683-53551702 MS.gene035877:CDS 50.0%
GTTCCTCTTAGATGGCCTAC+TGG - chr5.2:53550592-53550611 MS.gene035877:intron 50.0%
TCAAGCATGGTGCACCTAAG+TGG + chr5.2:53553051-53553070 None:intergenic 50.0%
TCTTAGCAGCCCAGCTGAAA+TGG - chr5.2:53554076-53554095 MS.gene035877:CDS 50.0%
TGACACATGCTGGCAAAGTG+AGG - chr5.2:53553928-53553947 MS.gene035877:CDS 50.0%
TGCTGCATGCACCAAGTCAT+AGG + chr5.2:53553001-53553020 None:intergenic 50.0%
TGTTTCCGGTACTCGTGTAC+CGG - chr5.2:53550048-53550067 MS.gene035877:CDS 50.0%
TTCAACGTATATAGGGGGGG+GGG - chr5.2:53551157-53551176 MS.gene035877:CDS 50.0%
TTCAATTGAAAGCCAGCGGC+GGG + chr5.2:53552312-53552331 None:intergenic 50.0%
! ATCGCTGTTGCTTGCGGTTT+CGG - chr5.2:53551274-53551293 MS.gene035877:intron 50.0%
! CTTCTGGAAGCTTGACCAAG+AGG - chr5.2:53550668-53550687 MS.gene035877:intron 50.0%
! GTCCAAACAAAGTATCCGCC+CGG + chr5.2:53551956-53551975 None:intergenic 50.0%
! GTGATGTCGGTCCTGTTTCT+TGG - chr5.2:53553285-53553304 MS.gene035877:CDS 50.0%
! GTTTTCCGGTACACGAGTAC+CGG + chr5.2:53550056-53550075 None:intergenic 50.0%
! TGTCATGTCAGATTGGTCCC+TGG - chr5.2:53553748-53553767 MS.gene035877:CDS 50.0%
!! ATGACTTGGTGCATGCAGCA+GGG - chr5.2:53553001-53553020 MS.gene035877:intron 50.0%
!! GGCATTGATTGGGACCAGAA+AGG - chr5.2:53551791-53551810 MS.gene035877:intron 50.0%
!! TATGACTTGGTGCATGCAGC+AGG - chr5.2:53553000-53553019 MS.gene035877:intron 50.0%
!! TTTCTAGGGGTGCTTCAAGG+TGG - chr5.2:53550431-53550450 MS.gene035877:intron 50.0%
!!! ATCCAGGACCGTGGTTTTGT+CGG - chr5.2:53552744-53552763 MS.gene035877:intron 50.0%
AAAGGTTCTCGGCCTCTGTG+TGG - chr5.2:53552221-53552240 MS.gene035877:CDS 55.0%
ATGTCTAGGCCTCTGCATCG+AGG - chr5.2:53550025-53550044 MS.gene035877:CDS 55.0%
CATGGTGCACCTAAGTGGCT+GGG + chr5.2:53553046-53553065 None:intergenic 55.0%
GACCGGGCGGATACTTTGTT+TGG - chr5.2:53551951-53551970 MS.gene035877:CDS 55.0%
GTGTGGTAGAGGTCTCGATG+TGG - chr5.2:53552238-53552257 MS.gene035877:CDS 55.0%
TCAACGTATATAGGGGGGGG+GGG - chr5.2:53551158-53551177 MS.gene035877:CDS 55.0%
TCGAGACCTCTACCACACAG+AGG + chr5.2:53552236-53552255 None:intergenic 55.0%
TCTGATCATCCGAAGAGGCC+CGG - chr5.2:53552567-53552586 MS.gene035877:CDS 55.0%
TGACAGGTTACTTCGCCCAG+AGG - chr5.2:53553086-53553105 MS.gene035877:intron 55.0%
TTGGTGAGGACTCTGACAGC+TGG - chr5.2:53552496-53552515 MS.gene035877:CDS 55.0%
! CCTCTGCATCGAGGTGTTTC+CGG - chr5.2:53550034-53550053 MS.gene035877:CDS 55.0%
! GCTGCCTGATGAACTTGGTG+AGG - chr5.2:53552482-53552501 MS.gene035877:CDS 55.0%
AACGTATATAGGGGGGGGGG+GGG - chr5.2:53551160-53551179 MS.gene035877:CDS 60.0%
CAACGTATATAGGGGGGGGG+GGG - chr5.2:53551159-53551178 MS.gene035877:CDS 60.0%
CCGGAAACACCTCGATGCAG+AGG + chr5.2:53550037-53550056 None:intergenic 60.0%
CTTCCCTTGATCCAGGACCG+TGG - chr5.2:53552735-53552754 MS.gene035877:intron 60.0%
GCATGGTGCACCTAAGTGGC+TGG + chr5.2:53553047-53553066 None:intergenic 60.0%
TCTCGGCCTCTGTGTGGTAG+AGG - chr5.2:53552227-53552246 MS.gene035877:CDS 60.0%
TGGAAAGGCCTCGCACCTAG+AGG + chr5.2:53552965-53552984 None:intergenic 60.0%
TTCTGTGGCCTCTAGGTGCG+AGG - chr5.2:53552954-53552973 MS.gene035877:intron 60.0%
ACGTATATAGGGGGGGGGGG+GGG - chr5.2:53551161-53551180 MS.gene035877:CDS 65.0%
CGCCGACAAAACCACGGTCC+TGG + chr5.2:53552749-53552768 None:intergenic 65.0%
CGGAGAAGGGTCCTCGTCAC+CGG + chr5.2:53552589-53552608 None:intergenic 65.0%
GGAGAAGGGTCCTCGTCACC+GGG + chr5.2:53552588-53552607 None:intergenic 65.0%
TCCTCGTCACCGGGCCTCTT+CGG + chr5.2:53552579-53552598 None:intergenic 65.0%
CGTATATAGGGGGGGGGGGG+GGG - chr5.2:53551162-53551181 MS.gene035877:CDS 70.0%
GAGGAACACAGACCCGCCGC+TGG - chr5.2:53552297-53552316 MS.gene035877:intron 70.0%
GTATATAGGGGGGGGGGGGG+GGG - chr5.2:53551163-53551182 MS.gene035877:CDS 70.0%
TATATAGGGGGGGGGGGGGG+GGG - chr5.2:53551164-53551183 MS.gene035877:CDS 70.0%
TCCGAAGAGGCCCGGTGACG+AGG - chr5.2:53552575-53552594 MS.gene035877:CDS 70.0%
ATATAGGGGGGGGGGGGGGG+GGG - chr5.2:53551165-53551184 MS.gene035877:CDS 75.0%
! TATAGGGGGGGGGGGGGGGG+GGG - chr5.2:53551166-53551185 MS.gene035877:CDS 80.0%
! ATAGGGGGGGGGGGGGGGGG+GGG - chr5.2:53551167-53551186 MS.gene035877:CDS 85.0%
! TAGGGGGGGGGGGGGGGGGG+GGG - chr5.2:53551168-53551187 MS.gene035877:CDS 90.0%
! AGGGGGGGGGGGGGGGGGGG+GGG - chr5.2:53551169-53551188 MS.gene035877:CDS 95.0%


Chromosome Type Strat End Strand Name
chr5.2 gene 53550025 53554185 53550025 ID=MS.gene035877
chr5.2 mRNA 53550025 53554185 53550025 ID=MS.gene035877.t1;Parent=MS.gene035877
chr5.2 exon 53553521 53554185 53553521 ID=MS.gene035877.t1.exon1;Parent=MS.gene035877.t1
chr5.2 CDS 53553521 53554185 53553521 ID=cds.MS.gene035877.t1;Parent=MS.gene035877.t1
chr5.2 exon 53553183 53553315 53553183 ID=MS.gene035877.t1.exon2;Parent=MS.gene035877.t1
chr5.2 CDS 53553183 53553315 53553183 ID=cds.MS.gene035877.t1;Parent=MS.gene035877.t1
chr5.2 exon 53552398 53552638 53552398 ID=MS.gene035877.t1.exon3;Parent=MS.gene035877.t1
chr5.2 CDS 53552398 53552638 53552398 ID=cds.MS.gene035877.t1;Parent=MS.gene035877.t1
chr5.2 exon 53552082 53552295 53552082 ID=MS.gene035877.t1.exon4;Parent=MS.gene035877.t1
chr5.2 CDS 53552082 53552295 53552082 ID=cds.MS.gene035877.t1;Parent=MS.gene035877.t1
chr5.2 exon 53551821 53551993 53551821 ID=MS.gene035877.t1.exon5;Parent=MS.gene035877.t1
chr5.2 CDS 53551821 53551993 53551821 ID=cds.MS.gene035877.t1;Parent=MS.gene035877.t1
chr5.2 exon 53551429 53551732 53551429 ID=MS.gene035877.t1.exon6;Parent=MS.gene035877.t1
chr5.2 CDS 53551429 53551732 53551429 ID=cds.MS.gene035877.t1;Parent=MS.gene035877.t1
chr5.2 exon 53551103 53551241 53551103 ID=MS.gene035877.t1.exon7;Parent=MS.gene035877.t1
chr5.2 CDS 53551103 53551241 53551103 ID=cds.MS.gene035877.t1;Parent=MS.gene035877.t1
chr5.2 exon 53550025 53550183 53550025 ID=MS.gene035877.t1.exon8;Parent=MS.gene035877.t1
chr5.2 CDS 53550025 53550183 53550025 ID=cds.MS.gene035877.t1;Parent=MS.gene035877.t1
Gene Sequence

>MS.gene035877

ATGTCTAGGCCTCTGCATCGAGGTGTTTCCGGTACTCGTGTACCGGAAAACATCAATGATGATACATGGGACTCACAATCCAAAGATAAATCAGAAAAAGATGATTTTGATAGAAGGGGTTCTTCAGATCACACCCCTTTAGCATTGAGGTCTCCTTTGAAGTTGTTGTTTTCAGATAAAGAGAATGGTTTTGCATCTGATCCAATCAGTGTTGGCTCACCAAGAAGCCGTTTTAAGTTGATGATGTTTTTGGTGAAATTTAGTTTAGTTTTTATAGTTGTTTTTGCTCTTGTTGGATCTTTTTTGTGGACTTTGAATTTGTCATCTTCGTCAAGAGGTCGTGTTTACCATGGTTATAGGAGACTTCAAGAGAAACTTGTTTCAGATTTGTTGGATATTGGTGAGATTTCTAGGGGTGCTTCAAGGTGGAAAGAATTGGAATCTTGTTCTCCTGAGTTGGAAAATTTTGTTCCTTGCTTTAATGTTTCCGATGGAAATGAGTTTGAAAGGAAATGTGAATATGAGCAGAGTCAAAATTGTTTGGTTCTGCCACCAGTTAATTACAAAGTTCCTCTTAGATGGCCTACTGGAAAAGATGTTATTTGGGTTGCTAATGTGAAAATCACTGCACAAGAGGTTCTTTCTTCTGGAAGCTTGACCAAGAGGTAACTAACATGTGTCTTTTCACTGTCAAGTAACTTCGTAACTGCGTTACGCGGAGAACCTGTATATTGCTGGAATATGTGGCTGATGCAGGCGAAATTACTGTTTCGATGCTGTTGCCAATACCCACAATTACGGTTGCGGATATTCATATCTATCACACTTTTTGCTAGTGAAGTTATAACTTTTTTTTCCTTTCAATTGCAGGATGATGATGTTGGATGAAGAACAAATTTCCTTTCGTTCAGCCTCTCATATGTTTGATGGAGTTGAAGACTATTCACATCAGATTGCTGAAATGATTGGACTTAGAAATGAATCTTCCTTCATACAAGCTGGTGTAAGTACATATATGTGATCTTAATTGAAATTGGTAAATTGAGTTTTTGTTGCGTTAATTTTTTTTTTTCCGGTGGTCTTTCTCCGTTGTATTTATACTTCACGTATTTGGTACACACTGGATGTTGGGTTCAACGTATATAGGGGGGGGGGGGGGGGGGGGGGGGGGGGGATTTTCTGTTGACTTAAATAGTAGTCGCAGTTACAGTTTGGAGAGTCTCAGTCAAACGCAGCTTTTGCGAACTCAATCGCTGTTGCTTGCGGTTTCGGCAACATCAAAAACCGTCATGTCTTGGTCCATATTGTGGTTGGCAAACCCTGTAGATAATAACTATATAATATAAATGATCATATGTATATCGTAATGCTTTTAGCTTGTACTTTGTTCTGGAATTGTTTGTTCTAAGCTATGTTGAGAGTGACTTGAGTTTTGACTTTTGATAGATTTTGGTGACTTTGAAATCGAGTTGATTTAAGTTTGACTATGATATTCCTTACCTTAAATGTTGTTTGATTGATAAATGTTTGCATCCTGAAATTTCCAGATTCGAACCGTACTAGACATAGGTTGTGGCTATGGTAGCTTTGGAGCACACCTCTTTGACAGTCAAATTTTGACTTTGTGCATTGCAAACTATGAGCCTTCTGGTAATCAAGTTCAGCTTACTCTTGAGCGAGGTCTTCCTGCTATGATTGCTTCTTTCACTTCAAAACAGTTGCCATATCCATCTCTGTCTTTTGATATGTTACATTGTGCAAGATGTGGCATTGATTGGGACCAGAAAGGTATTTGAGTTTAGGATCTAAATTTTTTTATCTGGCTTCAGAACCATAATTTTGCTGTGTTAAATCTTGTGTTCTAATTGACAACCACATTATGTGGAATAGATGGCGATCTCTTGATTGAAGCTGATAGACTTTTAAGACCGGGCGGATACTTTGTTTGGACCTCACCGCTTACAAATGCTCGTAACAAGGAGAATCAGAAAAGGTGGAAGATTGTGCACGACTTTACCGAAAATCTGTGCTGGGACATGTTATCACAGCAAGATGAAACTGTTGTATTTAAGAAAGCAAGCAAAAAGAATTGTTATACATCAAGGTAATCCTGCTTTACATGATGTACTTATGATAAATTATTTCCCTTTTGTGTAACCCTAATTCTTAGTATTACCTGTTTTTATTACCAGAAAGAAAGGTTCTCGGCCTCTGTGTGGTAGAGGTCTCGATGTGGAGTCTCCATATTATCGCGAACTGCAAAACTGCATAGGAGGAACACAGACCCGCCGCTGGCTTTCAATTGAAAAAAGGGAAAAATGGCCTTCTCGGGCAAATTTGAACAAGAATGAGTTAGCCATACATGGTATTGTTATGTAACTTCTGTTCTTTATGGAAGTGACTGTACTGTAATTGTACTTTCTTAGTGAATAAATTTTTCTTATTGCTATTAGGATTGCTGCCTGATGAACTTGGTGAGGACTCTGACAGCTGGAAAGCAGCAGTTCAAAATTACTGGTCACTCCTCTCGCCTGTAATATTTTCTGATCATCCGAAGAGGCCCGGTGACGAGGACCCTTCTCCGCCTTACAACATGTTCAGAAATGTGTTAGACATGAATGCTAACTTTGGTGGCTTTAATTCAGCTTTGTTGCAAGCTAGAAAGTCTGTGTGGGTAATGAACGTGGTCCCAAGAACTGGACCTAACTATCTTCCCTTGATCCAGGACCGTGGTTTTGTCGGCGTTTTGCATGATTGGTACTTTAATCTCCTTCCTCTTGTCCTTATATGGATTCCCTGGCATATGCTAGACAAGATTTCCCTTGGTGATTTAATGTTTTATTTTTCCACTTACCTTTGGCTTAGAGTCTTGAAGATTTGTTTCTAACTGCTAGACAAGATTGCAGCTTTCTAACAATTATAATCATTTTTCTGTGGCCTCTAGGTGCGAGGCCTTTCCAACATACCCGAGAACCTATGACTTGGTGCATGCAGCAGGGATTCTATCCCTTGAATTTTCCCAGCCACTTAGGTGCACCATGCTTGATCTGTTCATTGAAATTGACAGGTTACTTCGCCCAGAGGTATGTAAATTTAATAATGTGAACTTTACTCTATCTCCATTCCTTTCCTTTTATTTATTTATATATTCACCTGTTTCCTGAGAAAAGTTACTTTAAATAATTGAGGGTATGCAAAGATGTATTGATATAAGGCAGCCCTTCTGTTGTGTACCGACTGCTGTAAATGTGGTCTGTATGGTGATGTCGGTCCTGTTTCTTGGATAAAACAAAAATTGAAACATTTCAAAATGTTTGGTCTCATTTGATTTTAGAGTGAAATATCAATTTTGTACTCGAAATCGTAGGCATTAGACTATTTGATACTTGAAATTAATGCAATTATTAAATTATTCCTAAAATAAATTCACTATCACATCAGATTTTTTGGGTCAATTAATTTACCACCTAAAATTGTGTCTGGGAGACTAATTTGATTTTAGAGAATTTTCAATTTCAAAAATCACTTCTGAAGTTTTTTATTTTAGGTCACACAAATTGTGCGACTCCTGTAATTTAGAGGCTAAATTGGCGATTCACTCTTTGAATTGCCCAACTTGGTCCCTTACTTTTACCAAAATTTTATAAAATATCATGTTAATTAGTCCCTCACTTAGCAAAAAAGTTCATCAAGTTAGTCCCTCTGTTATGTTATCAGAAAGTTTGTCATGTCAGATTGGTCCCTGGAATTACACACGGAGTATGAAGTTGGTCCCTGAAATTAGATATTTAGTGTCTATTTGGTCCTTACACTTAACAAATTTAGGACCATGAGATTTATTTGACAAACTTTCTGAAAAGTGAGGGTCTAAATTAACATTTTTATCTAAGTGGGGGACCAAATTGACACATGCTGGCAAAGTGAGGGACTAAGTTGGACATTTACTCTTGATTTTATCATTTGGAAGGACTTCTGATATGCTGTTGTTTGTCATGTGTGCAGGGCTGGATTATAATTCGCGACACTATTCCTTTAATAGAATCAGCTAGAGTCTTAGCAGCCCAGCTGAAATGGGAAGCAAGAGTGATCGAAATCGAAAGTAACAGCGAGGAGAAACTCCTGATATGCCAGAAACCTTTCTTCAAGAAACATGCAATCTAA
Protein sequence

>MS.gene035877.t1

MSRPLHRGVSGTRVPENINDDTWDSQSKDKSEKDDFDRRGSSDHTPLALRSPLKLLFSDKENGFASDPISVGSPRSRFKLMMFLVKFSLVFIVVFALVGSFLWTLNLSSSSRGRVYHGYRRLQEKLVSDLLDIGEISRGASRWKELESCSPELENFVPCFNVSDGNEFERKCEYEQSQNCLVLPPVNYKVPLRWPTGKDVIWVANVKITAQEVLSSGSLTKRMMMLDEEQISFRSASHMFDGVEDYSHQIAEMIGLRNESSFIQAGIRTVLDIGCGYGSFGAHLFDSQILTLCIANYEPSGNQVQLTLERGLPAMIASFTSKQLPYPSLSFDMLHCARCGIDWDQKDGDLLIEADRLLRPGGYFVWTSPLTNARNKENQKRWKIVHDFTENLCWDMLSQQDETVVFKKASKKNCYTSRKKGSRPLCGRGLDVESPYYRELQNCIGGTQTRRWLSIEKREKWPSRANLNKNELAIHGLLPDELGEDSDSWKAAVQNYWSLLSPVIFSDHPKRPGDEDPSPPYNMFRNVLDMNANFGGFNSALLQARKSVWVMNVVPRTGPNYLPLIQDRGFVGVLHDWCEAFPTYPRTYDLVHAAGILSLEFSQPLRCTMLDLFIEIDRLLRPEGWIIIRDTIPLIESARVLAAQLKWEARVIEIESNSEEKLLICQKPFFKKHAI