AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene036226

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene036226.t1 MTR_1g072280 98.281 640 11 0 1 640 1 640 0.0 1296
MS.gene036226.t1 MTR_7g094810 68.095 630 199 2 13 640 9 638 0.0 871
MS.gene036226.t1 MTR_7g094810 67.666 634 199 3 13 640 9 642 0.0 865
MS.gene036226.t1 MTR_7g094810 69.597 546 166 0 13 558 9 554 0.0 778
MS.gene036226.t1 MTR_7g094810 69.091 550 166 1 13 558 9 558 0.0 772
MS.gene036226.t1 MTR_1g082870 51.510 629 303 2 13 640 17 644 0.0 673
MS.gene036226.t1 MTR_7g094810 67.615 457 148 0 13 469 9 465 0.0 634
MS.gene036226.t1 MTR_5g040690 49.583 599 299 2 13 611 18 613 0.0 611
MS.gene036226.t1 MTR_5g034580 47.276 624 307 5 13 634 11 614 0.0 598
MS.gene036226.t1 MTR_4g129890 44.757 639 343 5 9 640 16 651 0.0 544
MS.gene036226.t1 MTR_4g129310 41.017 590 319 5 21 589 29 610 4.76e-150 447
MS.gene036226.t1 MTR_5g034140 46.841 459 238 3 169 626 13 466 9.61e-143 425
MS.gene036226.t1 MTR_5g034660 44.904 314 141 2 302 615 7 288 1.52e-83 265
MS.gene036226.t1 MTR_8g010670 31.940 335 183 9 13 322 34 348 2.44e-31 128
MS.gene036226.t1 MTR_4g123543 38.547 179 84 4 484 637 4 181 1.72e-29 115
MS.gene036226.t1 MTR_4g073250 29.143 175 114 4 13 178 7 180 1.08e-13 70.5
MS.gene036226.t1 MTR_4g105060 40.964 83 49 0 210 292 17 99 1.66e-12 64.3
MS.gene036226.t1 MTR_5g022600 27.368 190 94 6 13 176 7 178 8.08e-12 65.1
MS.gene036226.t1 MTR_8g075240 28.324 173 114 4 13 176 7 178 1.81e-11 64.3
MS.gene036226.t1 MTR_6g087980 25.907 193 101 5 11 178 5 180 2.37e-11 63.9
MS.gene036226.t1 MTR_4g088055 28.324 173 114 4 13 176 7 178 3.73e-11 63.2
MS.gene036226.t1 MTR_2g090875 28.161 174 113 5 13 176 7 178 5.88e-11 62.8
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene036226.t1 AT3G63150 52.623 629 297 1 13 640 15 643 0.0 705
MS.gene036226.t1 AT5G27540 53.115 610 284 2 11 619 16 624 0.0 660
MS.gene036226.t1 AT5G27540 53.115 610 284 2 11 619 16 624 0.0 660
MS.gene036226.t1 AT3G05310 44.757 639 341 7 11 640 13 648 0.0 558
MS.gene036226.t1 AT3G05310 46.047 506 261 7 144 640 1 503 2.11e-151 447
MS.gene036226.t1 AT3G05310 47.761 469 236 5 144 604 1 468 6.19e-149 441
MS.gene036226.t1 AT4G35020 30.114 176 111 5 13 178 7 180 1.23e-12 67.8
MS.gene036226.t1 AT4G35020 30.114 176 111 5 13 178 7 180 1.23e-12 67.8
MS.gene036226.t1 AT4G35020 30.114 176 111 5 13 178 7 180 1.23e-12 67.8
MS.gene036226.t1 AT5G45970 28.324 173 114 4 13 176 7 178 1.32e-12 67.8
MS.gene036226.t1 AT5G62880 27.568 185 110 5 11 179 7 183 3.36e-12 66.6
MS.gene036226.t1 AT4G28950 26.702 191 100 5 11 178 5 178 4.73e-12 66.2
MS.gene036226.t1 AT3G51300 30.460 174 109 5 13 176 7 178 7.62e-12 65.5
MS.gene036226.t1 AT2G17800 29.310 174 111 5 13 176 7 178 1.54e-11 64.3
MS.gene036226.t1 AT2G17800 29.310 174 111 5 13 176 7 178 1.54e-11 64.3
MS.gene036226.t1 AT1G20090 28.161 174 113 5 13 176 6 177 1.57e-11 64.3
MS.gene036226.t1 AT1G75840 28.736 174 112 5 13 176 7 178 1.73e-11 64.3
MS.gene036226.t1 AT3G48040 28.249 177 117 4 11 178 7 182 3.11e-11 63.9
MS.gene036226.t1 AT2G44690 29.143 175 114 4 13 178 19 192 6.87e-11 62.8
MS.gene036226.t1 AT5G62880 26.554 177 104 6 11 169 7 175 9.50e-11 62.0

Find 138 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGATAAGGTTCACCTTTC+TGG 0.070235 1.3:+52056244 None:intergenic
TTCCTCACAAACTCAGTTTC+TGG 0.179724 1.3:+52052650 None:intergenic
TGCTTTGTTGTGTTCATTAT+TGG 0.182697 1.3:-52054038 MS.gene036226:CDS
TCATGAAGTAAACGAGTTTC+AGG 0.229303 1.3:-52057621 MS.gene036226:intron
CTTTCTTTAGAAACATATTA+TGG 0.237049 1.3:+52057366 None:intergenic
GGGGCTGCTATGGCGCTTGC+GGG 0.264211 1.3:-52052197 MS.gene036226:CDS
TCTCATACTGCGCGAAATTC+CGG 0.292362 1.3:-52053609 MS.gene036226:CDS
AAGGGCGAACAGAGACATTC+TGG 0.294271 1.3:-52057346 MS.gene036226:CDS
CTCTGCAGCTACACTTTATC+AGG 0.305426 1.3:-52058288 MS.gene036226:intron
TGATCAGAAGCCTTCTTTGA+TGG 0.312569 1.3:+52057260 None:intergenic
AACCTTCTCAAGCAAATCTA+TGG 0.313412 1.3:+52053016 None:intergenic
TGGGCAGTTCTAAGAAAGTT+TGG 0.318432 1.3:-52057326 MS.gene036226:CDS
GTTCTAAGAAAGTTTGGATA+TGG 0.333427 1.3:-52057320 MS.gene036226:CDS
TTTGTCAAATAAGGATTGTT+TGG 0.334558 1.3:-52053567 MS.gene036226:CDS
GAAGCCTTCTTTGATGGAAC+TGG 0.337089 1.3:+52057266 None:intergenic
ATATCCGATGCAAATCAAAT+TGG 0.366943 1.3:+52054183 None:intergenic
GTCTCAGCTGCGTCCATATA+TGG 0.370596 1.3:+52055058 None:intergenic
GCTTTGTTGTGTTCATTATT+GGG 0.372616 1.3:-52054037 MS.gene036226:CDS
TGCGAATAGGAATTCTTCTT+AGG 0.375295 1.3:-52052153 None:intergenic
CATAATATGTTTCTAAAGAA+AGG 0.380683 1.3:-52057365 MS.gene036226:CDS
AGCAGAATCAGTGAAGGAAT+TGG 0.384261 1.3:+52059131 None:intergenic
GTGGAAGGATGCACCATATA+TGG 0.388482 1.3:-52055071 MS.gene036226:CDS
CCAGCTCAGATGGATATTCA+TGG 0.391981 1.3:-52053046 MS.gene036226:intron
GTGGGCCCTTATGACATTAC+TGG 0.394936 1.3:-52054224 MS.gene036226:CDS
CCAAGAGAATTGACTCCTTC+GGG 0.396407 1.3:+52057416 None:intergenic
CTTTAACAGATCGGTGTGTA+AGG 0.412658 1.3:-52057700 MS.gene036226:CDS
GACACCCTTCAGAAACTCTA+TGG 0.421098 1.3:+52056473 None:intergenic
TCCTCATTGACACTCCTTCA+AGG 0.429605 1.3:-52059101 MS.gene036226:intron
CCCGAAGGAGTCAATTCTCT+TGG 0.430567 1.3:-52057416 MS.gene036226:CDS
TTGCCTCCTCATTGCTGCTA+AGG 0.438626 1.3:-52052958 MS.gene036226:CDS
CATACCTCTCAACAGTTGTC+GGG 0.439160 1.3:+52053843 None:intergenic
ACCAAGAGAATTGACTCCTT+CGG 0.439391 1.3:+52057415 None:intergenic
ATCAAAGAAGGCTTCTGATC+AGG 0.440478 1.3:-52057258 MS.gene036226:intron
TGGGGCTGCTATGGCGCTTG+CGG 0.442012 1.3:-52052198 MS.gene036226:CDS
CTCGTCGTGCACGTGCGAAT+AGG 0.448020 1.3:-52052166 MS.gene036226:CDS
TCTGAAGGGTGTCTTTAGAT+TGG 0.452712 1.3:-52056463 MS.gene036226:CDS
AGGTAACAACTTCTCTGAAC+TGG 0.454077 1.3:+52058321 None:intergenic
TTGGATCCAGTAATGTCATA+AGG 0.455858 1.3:+52054218 None:intergenic
GAAGTTAGAATCGTCATTGT+TGG 0.456383 1.3:-52059252 MS.gene036226:CDS
AGCAATGGAGGAACGGTGGC+TGG 0.456584 1.3:+52059174 None:intergenic
GGCAGTATTAGATTCAGTTA+AGG 0.460273 1.3:-52052913 MS.gene036226:intron
TCTGAAGGGATTTCTTTCTC+AGG 0.460775 1.3:-52055014 MS.gene036226:intron
ACACAACAAAGCAGATTTCC+CGG 0.461377 1.3:+52054048 None:intergenic
GCATACCTCTCAACAGTTGT+CGG 0.461451 1.3:+52053842 None:intergenic
GCGATCTTCTGATCTTCTAC+TGG 0.461661 1.3:+52054129 None:intergenic
TCTTCCAGTTCCATCAAAGA+AGG 0.465826 1.3:-52057270 MS.gene036226:CDS
ATTTACAGCTGGGGCTGCTA+TGG 0.475362 1.3:-52052207 MS.gene036226:intron
AAATTTGATACTTCATCCTC+CGG 0.479185 1.3:+52053590 None:intergenic
TCTAATACTGCCCTTGGGAA+TGG 0.482102 1.3:+52052924 None:intergenic
ACTGAATCTAATACTGCCCT+TGG 0.489304 1.3:+52052918 None:intergenic
CAGAAGCCATGGCGGAAATG+AGG 0.489664 1.3:+52059205 None:intergenic
AATAGCTTATCAACTTCTGC+AGG 0.490928 1.3:+52056277 None:intergenic
TAGATTGGTAGATACGGATA+AGG 0.493343 1.3:-52056448 MS.gene036226:intron
ATAATATGTTTCTAAAGAAA+GGG 0.493548 1.3:-52057364 MS.gene036226:CDS
ATTTAACAGATTAGAAGCTT+CGG 0.496381 1.3:-52057497 MS.gene036226:intron
ATCCATAGATTTGCTTGAGA+AGG 0.499172 1.3:-52053018 MS.gene036226:CDS
AAGGCACCTGTGCTTGTGGT+TGG 0.502067 1.3:-52058413 MS.gene036226:CDS
ACCTCAAGCTTCTGCAGTTG+AGG 0.503695 1.3:+52058723 None:intergenic
TCTAACTTCCTTGAGAATTG+TGG 0.510139 1.3:+52059266 None:intergenic
GTTTGTAGTGTGGGAGAACA+AGG 0.512506 1.3:-52058843 MS.gene036226:intron
TGGATCCAGTAATGTCATAA+GGG 0.519977 1.3:+52054219 None:intergenic
CATGGGTTATATATCTCTGA+AGG 0.526099 1.3:-52055029 MS.gene036226:CDS
TTGATCTTCGCGATGAAAGT+AGG 0.527652 1.3:-52058382 MS.gene036226:CDS
TGTTGTGTTCATTATTGGGA+AGG 0.530279 1.3:-52054033 MS.gene036226:intron
TGGTAACGATTTAAAACTGC+GGG 0.532813 1.3:-52057300 MS.gene036226:CDS
TTGGCCAATTTGATTTGCAT+CGG 0.536674 1.3:-52054187 MS.gene036226:CDS
AGCTGCAGAGCATTCAATAC+AGG 0.540262 1.3:+52058301 None:intergenic
GTTTCTGGAATACTCAAATG+AGG 0.541865 1.3:+52052665 None:intergenic
CGCAGCTGAGACAACTGACA+TGG 0.542166 1.3:-52055047 MS.gene036226:CDS
CTGAATCTAATACTGCCCTT+GGG 0.544433 1.3:+52052919 None:intergenic
GTGTTGCGGTTATTCGCCAT+TGG 0.544847 1.3:+52059288 None:intergenic
TTATGGATTTCAATGAAGCC+AGG 0.545176 1.3:+52057383 None:intergenic
TGTCTTTAGATTGGTAGATA+CGG 0.547117 1.3:-52056454 MS.gene036226:CDS
TGTGACCAGTCAGCTCTCCT+TGG 0.552855 1.3:+52052988 None:intergenic
AGAAGCCATGGCGGAAATGA+GGG 0.554219 1.3:+52059206 None:intergenic
AAATTGGCCAAGCTATACCT+TGG 0.561191 1.3:+52054199 None:intergenic
AGGGCGAACAGAGACATTCT+GGG 0.562336 1.3:-52057345 MS.gene036226:CDS
GGAGTGTCAATGAGGATGAG+AGG 0.563202 1.3:+52059108 None:intergenic
TTATGACATTACTGGATCCA+AGG 0.567358 1.3:-52054216 MS.gene036226:CDS
AAGCGAGTGGGACGAAGCAA+TGG 0.567921 1.3:+52059159 None:intergenic
GCCTCAACTGCAGAAGCTTG+AGG 0.568136 1.3:-52058724 MS.gene036226:intron
ACTGGATCCAAGGTATAGCT+TGG 0.570727 1.3:-52054206 MS.gene036226:CDS
TTACAACCAACCACAAGCAC+AGG 0.571926 1.3:+52058407 None:intergenic
TTCCAGAAACTGAGTTTGTG+AGG 0.576010 1.3:-52052652 MS.gene036226:CDS
GGGGTATAGTCATTTGAGAA+AGG 0.576441 1.3:+52053863 None:intergenic
CCTTGAGAATTGTGGTGTTG+CGG 0.581183 1.3:+52059274 None:intergenic
AACAACCCTCATTTCCGCCA+TGG 0.582577 1.3:-52059211 MS.gene036226:CDS
ATGATTTAACTCCATTCCCA+AGG 0.583770 1.3:-52052935 MS.gene036226:CDS
ATATATGGTGCATCCTTCCA+CGG 0.585996 1.3:+52055073 None:intergenic
CTTGAGAAGGTTGTTAACCA+AGG 0.586698 1.3:-52053005 MS.gene036226:CDS
GTTAACCAAGGAGAGCTGAC+TGG 0.586839 1.3:-52052993 MS.gene036226:CDS
GGTGAAGGCACCTGTGCTTG+TGG 0.595573 1.3:-52058417 MS.gene036226:CDS
TATTTGATGCTGCTCCAGAA+AGG 0.598655 1.3:-52056258 MS.gene036226:intron
TGGAAAAGAATCAGAAGCCA+TGG 0.599485 1.3:+52059194 None:intergenic
CGAGTGGGACGAAGCAATGG+AGG 0.600764 1.3:+52059162 None:intergenic
TAATCGAACAAAGGATCCAC+CGG 0.602022 1.3:+52057734 None:intergenic
AGCTTAGAGAGTCTTACCAC+GGG 0.605360 1.3:-52058353 MS.gene036226:CDS
GAGAGGAGCAGAATCAGTGA+AGG 0.606281 1.3:+52059125 None:intergenic
ATACAAATGCTTTAACAGAT+CGG 0.608228 1.3:-52057709 MS.gene036226:CDS
CTGATCTTCTACTGGTGAGG+CGG 0.609210 1.3:+52054137 None:intergenic
TGCAGCCATAGAGTTTCTGA+AGG 0.611642 1.3:-52056478 MS.gene036226:CDS
TTAGCAGCAATGAGGAGGCA+AGG 0.612757 1.3:+52052960 None:intergenic
GTGAGGCGGAGTGCTGCAGA+AGG 0.615514 1.3:+52054151 None:intergenic
CCGCAACACCACAATTCTCA+AGG 0.616671 1.3:-52059274 MS.gene036226:CDS
CTTCTGATCTTCTACTGGTG+AGG 0.617826 1.3:+52054134 None:intergenic
GGGACGAAGCAATGGAGGAA+CGG 0.619100 1.3:+52059167 None:intergenic
TTTAACAGATCGGTGTGTAA+GGG 0.622425 1.3:-52057699 MS.gene036226:CDS
TTGAGCGTGTGAGTACTCAC+TGG 0.626840 1.3:-52058749 MS.gene036226:CDS
GAATCAGTGAAGGAATTGGA+AGG 0.630882 1.3:+52059135 None:intergenic
GAATTGGAAGGCAAGCGAGT+GGG 0.632574 1.3:+52059147 None:intergenic
GTTTACTTCATGATCAGTGA+GGG 0.634060 1.3:+52057631 None:intergenic
ATGGGTTATATATCTCTGAA+GGG 0.637075 1.3:-52055028 MS.gene036226:CDS
CATCCTTAGCAGCAATGAGG+AGG 0.637329 1.3:+52052955 None:intergenic
TTTCTGGAATACTCAAATGA+GGG 0.637333 1.3:+52052666 None:intergenic
TTTGTATCATAATCGAACAA+AGG 0.639965 1.3:+52057725 None:intergenic
GGAATTGGAAGGCAAGCGAG+TGG 0.645051 1.3:+52059146 None:intergenic
ATTGTTGGTGACAAATCCGT+CGG 0.648458 1.3:-52059237 MS.gene036226:CDS
TGATTTAACTCCATTCCCAA+GGG 0.649017 1.3:-52052934 MS.gene036226:CDS
TAGTGTGGGAGAACAAGGCA+AGG 0.650886 1.3:-52058838 MS.gene036226:CDS
TAGCTTAGAGAGTCTTACCA+CGG 0.652590 1.3:-52058354 MS.gene036226:CDS
AAAAGCGGCACTTCATCCGG+TGG 0.658887 1.3:-52057750 MS.gene036226:CDS
AAACATCATTGAATTAATAG+CGG 0.663141 1.3:-52053816 MS.gene036226:intron
ATACCCCGACAACTGTTGAG+AGG 0.663613 1.3:-52053847 MS.gene036226:CDS
TAAAAGTGTGAAGAAGCTGC+TGG 0.665593 1.3:+52052615 None:intergenic
CATACTGCGCGAAATTCCGG+AGG 0.669618 1.3:-52053606 MS.gene036226:CDS
ATACCTCTCAACAGTTGTCG+GGG 0.670103 1.3:+52053844 None:intergenic
ACGAAGCAATGGAGGAACGG+TGG 0.670619 1.3:+52059170 None:intergenic
CGTTTACTTCATGATCAGTG+AGG 0.676362 1.3:+52057630 None:intergenic
AATCATCCTTAGCAGCAATG+AGG 0.677246 1.3:+52052952 None:intergenic
GTAATGATAATGGACCTTGA+AGG 0.682832 1.3:+52059087 None:intergenic
GCAGCTGAGACAACTGACAT+GGG 0.682979 1.3:-52055046 MS.gene036226:CDS
ATGGTAACGATTTAAAACTG+CGG 0.688611 1.3:-52057301 MS.gene036226:CDS
GCAGCCATAGAGTTTCTGAA+GGG 0.689488 1.3:-52056477 MS.gene036226:CDS
TTGCAGAGTGTGGAGCTGAG+TGG 0.698077 1.3:-52056501 MS.gene036226:intron
GTACTGCGGAATGTTCCCGA+AGG 0.702057 1.3:-52057431 MS.gene036226:CDS
AAAAGAATCAGAAGCCATGG+CGG 0.711675 1.3:+52059197 None:intergenic
ACCTTGAAGGAGTGTCAATG+AGG 0.723490 1.3:+52059100 None:intergenic
GAACTGGTTCATGATACCCG+TGG 0.742844 1.3:+52058337 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr1.3 gene 52052154 52059307 52052154 ID=MS.gene036226
chr1.3 mRNA 52052154 52059307 52052154 ID=MS.gene036226.t1;Parent=MS.gene036226
chr1.3 exon 52059102 52059307 52059102 ID=MS.gene036226.t1.exon1;Parent=MS.gene036226.t1
chr1.3 CDS 52059102 52059307 52059102 ID=cds.MS.gene036226.t1;Parent=MS.gene036226.t1
chr1.3 exon 52058725 52058857 52058725 ID=MS.gene036226.t1.exon2;Parent=MS.gene036226.t1
chr1.3 CDS 52058725 52058857 52058725 ID=cds.MS.gene036226.t1;Parent=MS.gene036226.t1
chr1.3 exon 52058289 52058438 52058289 ID=MS.gene036226.t1.exon3;Parent=MS.gene036226.t1
chr1.3 CDS 52058289 52058438 52058289 ID=cds.MS.gene036226.t1;Parent=MS.gene036226.t1
chr1.3 exon 52057622 52057798 52057622 ID=MS.gene036226.t1.exon4;Parent=MS.gene036226.t1
chr1.3 CDS 52057622 52057798 52057622 ID=cds.MS.gene036226.t1;Parent=MS.gene036226.t1
chr1.3 exon 52057259 52057510 52057259 ID=MS.gene036226.t1.exon5;Parent=MS.gene036226.t1
chr1.3 CDS 52057259 52057510 52057259 ID=cds.MS.gene036226.t1;Parent=MS.gene036226.t1
chr1.3 exon 52056449 52056517 52056449 ID=MS.gene036226.t1.exon6;Parent=MS.gene036226.t1
chr1.3 CDS 52056449 52056517 52056449 ID=cds.MS.gene036226.t1;Parent=MS.gene036226.t1
chr1.3 exon 52056259 52056314 52056259 ID=MS.gene036226.t1.exon7;Parent=MS.gene036226.t1
chr1.3 CDS 52056259 52056314 52056259 ID=cds.MS.gene036226.t1;Parent=MS.gene036226.t1
chr1.3 exon 52055015 52055096 52055015 ID=MS.gene036226.t1.exon8;Parent=MS.gene036226.t1
chr1.3 CDS 52055015 52055096 52055015 ID=cds.MS.gene036226.t1;Parent=MS.gene036226.t1
chr1.3 exon 52054034 52054245 52054034 ID=MS.gene036226.t1.exon9;Parent=MS.gene036226.t1
chr1.3 CDS 52054034 52054245 52054034 ID=cds.MS.gene036226.t1;Parent=MS.gene036226.t1
chr1.3 exon 52053817 52053886 52053817 ID=MS.gene036226.t1.exon10;Parent=MS.gene036226.t1
chr1.3 CDS 52053817 52053886 52053817 ID=cds.MS.gene036226.t1;Parent=MS.gene036226.t1
chr1.3 exon 52053533 52053645 52053533 ID=MS.gene036226.t1.exon11;Parent=MS.gene036226.t1
chr1.3 CDS 52053533 52053645 52053533 ID=cds.MS.gene036226.t1;Parent=MS.gene036226.t1
chr1.3 exon 52052914 52053064 52052914 ID=MS.gene036226.t1.exon12;Parent=MS.gene036226.t1
chr1.3 CDS 52052914 52053064 52052914 ID=cds.MS.gene036226.t1;Parent=MS.gene036226.t1
chr1.3 exon 52052603 52052786 52052603 ID=MS.gene036226.t1.exon13;Parent=MS.gene036226.t1
chr1.3 CDS 52052603 52052786 52052603 ID=cds.MS.gene036226.t1;Parent=MS.gene036226.t1
chr1.3 exon 52052154 52052221 52052154 ID=MS.gene036226.t1.exon14;Parent=MS.gene036226.t1
chr1.3 CDS 52052154 52052221 52052154 ID=cds.MS.gene036226.t1;Parent=MS.gene036226.t1
Gene Sequence

>MS.gene036226

ATGGCGAATAACCGCAACACCACAATTCTCAAGGAAGTTAGAATCGTCATTGTTGGTGACAAATCCGTCGGCAAAACAACCCTCATTTCCGCCATGGCTTCTGATTCTTTTCCAGCCACCGTTCCTCCATTGCTTCGTCCCACTCGCTTGCCTTCCAATTCCTTCACTGATTCTGCTCCTCTCATCCTCATTGACACTCCTTCAAGGTCCATTATCATTACCACATTAAAAAGATAATTAAATTCAAATTAAAAACTGTTTTATTTTACTATTTGTTAATACTTAATTTGTTAATCAAATACAAACCCTAGTTTTTTTTCTTAATTTAAAATGTGTACGTGAATTGTGGTTTGAATGTGACGACGCTTTCTGTGTTTATTGAAGTATGTGTTGGTACTGTGCTGATAGCAAAATATGAAGAAAAAAAATGTGGTTTGTTTTTGTTTGTAGTGTGGGAGAACAAGGCAAGGTTGTTGAAGAATTGAAGCGTGCTGATTCAGTGATTGTAACTTATGCTTGTGATGATACAATCAGTTTTGAGCGTGTGAGTACTCACTGGCTGCCTCAACTGCAGAAGCTTGAGGTTGGTGATTGGTTTTGCTTCTTTTGCTGTCATTTTCAATACGGGCAGGAGATTATGTAGAAAATGAAGTTTCCTTTTTTTAAAAAAAAAATTGGGGTTGAGGGAAATCATTGTTAGTTAAAGTGGCATTGATTACCATTTTACAACCGTTCTGAGTGGATTTGAATTCTGTGTTTTGAGGTTGGTTATAAGGTCAAACTTTGACCACTGAGCTGATCACTCATGGGCGAGAAAAATGAGAGGTGGTATCGTAATAATATTTTTGTTTTTTCCATGATATATATAGGTGAAGGCACCTGTGCTTGTGGTTGGTTGTAAGCTTGATCTTCGCGATGAAAGTAGGCAAGTTAGCTTAGAGAGTCTTACCACGGGTATCATGAACCAGTTCAGAGAAGTTGTTACCTGTATTGAATGCTCTGCAGCTACACTTTATCAGGTATACTGTTGTCTCATTTTTGTTACTTGTTCATTCTAATCGATCATTTACCTACCCTTCAAATTAAGTTTAAATTGTTATTGTTAGTTAAGTGTTGAATTAGTAAACAACATCAAAATTTAAGAGTAGTTTGTTTTCTTTAAGGTCACTCAAATCAATCCTGTGGGTTGCTTGCCGCGCCCTTTGTTGCAATAGTCCTAAGAAATTTGTGCATGTTTGCAGTGGTATAGTTTATTTGTTTTAGCCTTTAAGGTATGTGAGGAGGTTTTAAATTGTGGTTGCGGTTCCGTTGAGATCTTTGATGTTGTGGAAAATTATGATCAAATAGGCTGCAATTGTAATCACAATGCGGCCGCAGAGACATTAAAACCTTTGGACCGTCTTTTAAAACCTTGATAAGGATATCTTCTTGATGATGTTAGAGTTAATACTTGTTTCTTTAGTTTGTAAATCTCATGTGCAGTATATGTATCATTAATTTTGGTTATAGGTTCCCGAAGTTTTTTATTTTGCACAAAAAGCGGCACTTCATCCGGTGGATCCTTTGTTCGATTATGATACAAATGCTTTAACAGATCGGTGTGTAAGGGCACTGAGAAGAATATTTAATCTTTTTGATTACAACATGGATGGCACCCTCACTGATCATGAAGTAAACGAGTTTCAGGTTTTTGATCGACTTGGTTACCTCCCCCCCACCTTTTGAATTTCACATGCTTTGAATGTTTATTTAGTTTGTTTTAGCCCCTTTGTTTATGAAAATTTGTGTATTTAACAGATTAGAAGCTTCGGTGCATCATTGCAGCAGCCTGACATAACTCAATTAAAAACAATGGTACTGCGGAATGTTCCCGAAGGAGTCAATTCTCTTGGTCTTACTTTTCCTGGCTTCATTGAAATCCATAATATGTTTCTAAAGAAAGGGCGAACAGAGACATTCTGGGCAGTTCTAAGAAAGTTTGGATATGGTAACGATTTAAAACTGCGGGATGATTTTCTTCCAGTTCCATCAAAGAAGGCTTCTGATCAGGTCATACTTACCTTTTGGTTTTGGCTATTATGAAGGTCCATTTTCGTCTTCCTGTTTGGTTTAGTTGGAAGATTAGAGTACTGGCTTAGTCATTTAATTGTTGTAAGTTTCAGTACTTACGAACCATAGGAAAAAAAAATTTCTTCCAGCTGAACTAGGAAAACTTAAATGTTAAATATGGGATGTACTAGTAATGTTGGTAATTAACTACTAATCCTATGTTTTCTCAGTATTAATGATTAAAGATTATTCTTGTTCAAAAATGATTAAAGATTATGAGAAATCTAGATATTATAGTTGTTCCAGAAAAAAGTAACTTTTGTTTTATGTGTTGCATGATTACTCATTGTCCAAATTCTAGATATTTTCTTCTACTTTAGCATTCATTAGTTTACAAATATGACAGTAGAATTAGTTTACCGCCAGTACTTGACATATTATGCCTTGTTGTCATTGTTTATTTGTTTACAAATATGACAGTAGAATTAGTTTACCGCCAGTACTTGACATATTATGCCTTGTTGTCATTGTTTATTTGTTTACTTGAAGAGAGGATCTAAGCATATGACGGTACTGTTTTATGATGCATGTTGTTCAATCAAATGATAAACTTCATAGAATCATGAGACATAGGATTGCTTTTGGCCATAAAGCCTTGACAAGTTCCAAAGGTGTTTTACCATTCCTATTTAACTAGCAAATAATATGTAAAACTTTACATTGTTTAAAATCATTTTGCAGAGTGTGGAGCTGAGTGGTGCAGCCATAGAGTTTCTGAAGGGTGTCTTTAGATTGGTAGATACGGATAAGGTATGTAATAATTTTTTTTTTTTTATCATCTTGAACACTGCTATGCTCTTTGAACATCCCACCTTAGGTGGCTTTCTATGTATAATATTGATATACTTGCTGACTTTCTCTCTGGAAAAATGATGCTTTTCTAGGATCAATTACTACAACCTGCAGAAGTTGATAAGCTATTTGATGCTGCTCCAGAAAGGTGAACCTTATCTTCAATGGACACTTAAAAAAAAGTTTTCCCCGAATCTCATATCTAATCCATGTAGCTTATCCGTTCTTACCATTGATGGTGTAGTCTAGAACTTGTGGATTGCCTCCAACAGCTTGATATATTGCTTCAGTAGCAAGAGGAGAGCTTTTAGAAAATTTCCAGGTTTAAAACCCAATACATATTGAGAGGATCCAAGGTGACAAAAGAATTTACAGACTTAGTAAGGCAGGAGAAAGAGTCTGACCCTTCCCTGGAGTCTCCAATACCTTAACGGTACCAAGTTGCCCTTTTAGTGAGGAAGGAGAATAAAAGTAGGTGACTAACAATAGTTATCAAATATGTTAGGAATTTGCTTAACTACAGCAGAGGAAATGGAAAGGGGCAAATATCTTACCTTAATCTCTAGAAGTGGTTTGATAGGGTAGAGACAATTCATGTTATGTCTAGTGATACAATTGAGTTCTTAAATAATTGTTGGATTGTTTATGTTCATGACATCTTGATAATGCTTATATAATTATGATGGGAGCGTATTAGGTTTGGTATTTAGTCCATCAACTTAATTTATGAAGGGTTTATTTTGTCATTTAATCCTGTCCCGTGGGCTTCTAAAATGTAGGTGTCTTTTTTTATTGATTGTGGGTATGTTGTAGCAGTTCGTAGCAATGTTATTATAACTGCCTGACATCTCTTTTATTTTGGGGGAATGAATCATTTCAGTTACTTGAGAAATCTGAACCTCCAAAAATGTGATGTGCTGCTTACTCGTTTTGGTTGCGACTCCTTGTAACCAATATGTGAGTTTGTGACTATGTGCAAGTGTTTATGTGTATTTTTGTTTCTTGGCATGTACCATTTCCCTTGATAATTACTGATGTCACAGAAAAGATGTGGCACCATAACTTTTCTAATTGATATATAACCTAACTATAATCCACTTTTACTACTTTCCTTCTACATCCTAGACGACGGTTAACACTTAGTACAGCTTGAAATATTAGTATTATATTCCTCAAGTTTATTTTGGAGCCAATCAAGTTCCTCTATTAATTGGATGCTTACTAACACATGTTGAAATAATCCTATAGCAGCCTTTGTTTCTCCACCTGAAGTTGTACATCTCAGATTTTCTACTTGTTTTTCATTTTAGTCCGTGGAAGGATGCACCATATATGGACGCAGCTGAGACAACTGACATGGGTTATATATCTCTGAAGGGATTTCTTTCTCAGGTGATTATCTATTACTTTTTGTTTTATTCTTAAACCTGACATTGGATAATTTTTTGAATATATTTTAAATTTCCTGATTCTATGTATTATTATTGTTTATATTGTCTACAATGGTTATCTCATACTACAATAGTAGACTAGAGAGTGAGGTTGAAGTAGGTTCGATGTCATAATTTATCCAGTTCGGGGAGAAAGTTTCTCAGGGATTATGATAATAAGAACCAGGGAAGACACAAGTTTATAGCTAAATTTCTCAGGGATTATGAATTTAGCTATATCTCAGGGATTATGGAAGGAACACCAATGAGACAAAGGAGTGTTGTGTCTTCTCTGGTTCTTATTAACACAATCCCTCAAATTTAGCTATTTCGAGGTAGTTTCTGCATCTAATTTCTTGGAAGAAATATCAAAGGAATTTACTCATTGGTGTTACTTTCATTTAATTTATAGAATTCCAGTTTTCTGGTAATCTGGATAACTATCCAGAACTTTACAAGTGTTGTGCCATGGCATCTTTTCCCATGAAGAAATGATTACTTTGTGATTTTCTCGTGGGAGTACCTCCCTCCCTTTCATTCAATCATCATTTTATCTTTTTGCTGCATGTTTTGAATGGGATGGATTAGTATTTACTCTAGTAGCATAACTCTGCTTCATTTGTTCTTGTATTGTAGATAGATTGAAATTGATTTTGTTTTTATTACCATTCATCTCCCTTCACATTCAGTTGGCAATTGAGTTTATTATCGATATGTTTTTATTGGTGTAGTGGGCCCTTATGACATTACTGGATCCAAGGTATAGCTTGGCCAATTTGATTTGCATCGGATATAGAGATAATCCTTCTGCAGCACTCCGCCTCACCAGTAGAAGATCAGAAGATCGCAAGAACCAAAAAACAGAAAGAAATGTGTTCCAATGCTATGTTTTTGGTTCTAAAACTGCCGGGAAATCTGCTTTGTTGTGTTCATTATTGGGAAGGTGTGCTCCTAAACCAATCCTCATAATCAATGTGCCCGAGCTTGTTTCATTATCTTTTAATTTATCAGCATGTAAAATGAACACGCTCATACTGTTTATTTTTGTTTCCTTCAAAGCAATAGTTAATTTACTCTGTCAATTTCACAGGCCTTTCTCAAATGACTATACCCCGACAACTGTTGAGAGGTATGCAGCAAACATCATTGAATTAATAGCGGTAAGGATGAGTTTTATAATGAGAAACTATTATTACCATTTAAATTATTCTGAAAAATAATACTGTCCTCTCCTGTTTCCCCCGATCTAATATACCTTATTGCTGATAGCTAATAATTAAATTTGTACAAGATGCATTTATATACTAACAATCCTGATGTTTACCACATAGGGAACTAAGAAAACTCTCATACTGCGCGAAATTCCGGAGGATGAAGTATCAAATTTTTTGTCAAATAAGGATTGTTTGGCTGCATGTGATGTAGCTGCTTTTGTACATGACAGGTGTGGTGCAAAATTATTTTATGAAGTAATTCTTTGCTAAAGTTTAGCTATAGGAAAGTGGTATAGCATTTTTGTGTCCCTTTAACCACCGGTATTAATTATATAGTTTGGAAACACATCGAATAACATTTTCTGTATCTGCTTATATTTTTATTGGTTGGGTGGAAACATAAATGACAGATCTTCTAAAACCATTAATGATCTTTTAACATGCCTACCTTACATGTCGAGTTTCCCTATGAGCTTGTTAATTATTTATTTTGGCTAAAATTTACTGAGTTATTATCAAATACTTAAACCCTTAAATTAGTTAATCTGACCTATGAATCGTTTTAATTTGGCTTGTATCCTTATGGTACCTTTCTGGAAGAGTATGATGCAATGAATTTCATCCCATACAATACTATATACTGAAAATGGAGAAGAGTGCAGGATTTACACCTAAGATCTTTGTTTCTTATTTTCCAGCTCAGATGGATATTCATGGAAAAGATCCATAGATTTGCTTGAGAAGGTTGTTAACCAAGGAGAGCTGACTGGTCACAGATTTCCTTGCCTCCTCATTGCTGCTAAGGATGATTTAACTCCATTCCCAAGGGCAGTATTAGATTCAGTTAAGGTAATGCATTTTCAGCTCATGATAATTTGATTACCATATCGTTTCATATAATAATCTAAAATGTCATCAGCTCATAGTTATACCTCCGAGTTCAGCATTTTATTTCCTATTTTTCGTTATAATGTAGGTTGCTCAAGAATTGAAAATAGACGCTCCTATTCGCTTGAGTATAAAATCAGATGATTCAAATAACGTGTATAGTAAGATTATAAATGCTGCAGAACACCCTCATTTGAGTATTCCAGAAACTGAGTTTGTGAGGAAAAGAAAGCAACACCAGCAGCTTCTTCACACTTTTATCTTTGCCTTAGGTGAGTTTACTTTTTCTACCTCTCACCAGAATTCGATAGCTTGGAACTTACGAAACAAATATGCATAATACTCCCTCCGTCCCGCAATAGATGACCCATTTGAAAATGTGCAATTTTGACCTAACTTACTTTGACTGCATTTTTCTACTAATATACAAAGATAAATAATATCATATAAGATGTCGTTAGATTCGTCTCGATGAGTATTTTCAAAATATCAAATTTTCATAATTTTTTTCTAATATATTATTCAAGATATTTAAGCTCAAAGTTATGCATTGACATGCGTAATAAGGTCAACTGTGTCAAGTATTATGGGACGGAGGGAGTACCATTTTTCTATGTTAGACTTTTAAATATCTTTCTTTCCTGAATTTACAGCTGGGGCTGCTATGGCGCTTGCGGGTTTTACAGCTCGTCGTGCACGTGCGAATAGGAATTCTTCTTAG
Protein sequence

>MS.gene036226.t1

MANNRNTTILKEVRIVIVGDKSVGKTTLISAMASDSFPATVPPLLRPTRLPSNSFTDSAPLILIDTPSSVGEQGKVVEELKRADSVIVTYACDDTISFERVSTHWLPQLQKLEVKAPVLVVGCKLDLRDESRQVSLESLTTGIMNQFREVVTCIECSAATLYQVPEVFYFAQKAALHPVDPLFDYDTNALTDRCVRALRRIFNLFDYNMDGTLTDHEVNEFQIRSFGASLQQPDITQLKTMVLRNVPEGVNSLGLTFPGFIEIHNMFLKKGRTETFWAVLRKFGYGNDLKLRDDFLPVPSKKASDQSVELSGAAIEFLKGVFRLVDTDKDQLLQPAEVDKLFDAAPESPWKDAPYMDAAETTDMGYISLKGFLSQWALMTLLDPRYSLANLICIGYRDNPSAALRLTSRRSEDRKNQKTERNVFQCYVFGSKTAGKSALLCSLLGRPFSNDYTPTTVERYAANIIELIAGTKKTLILREIPEDEVSNFLSNKDCLAACDVAAFVHDSSDGYSWKRSIDLLEKVVNQGELTGHRFPCLLIAAKDDLTPFPRAVLDSVKVAQELKIDAPIRLSIKSDDSNNVYSKIINAAEHPHLSIPETEFVRKRKQHQQLLHTFIFALAGAAMALAGFTARRARANRNSS