AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene44096

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene44096.t1 MTR_1g082870 98.452 646 10 0 1 646 1 646 0.0 1308
MS.gene44096.t1 MTR_5g040690 71.567 619 173 2 1 618 1 617 0.0 906
MS.gene44096.t1 MTR_5g034580 70.636 613 160 4 17 628 11 604 0.0 886
MS.gene44096.t1 MTR_4g129890 60.903 642 240 4 9 644 12 648 0.0 775
MS.gene44096.t1 MTR_7g094810 56.467 634 275 1 14 646 6 639 0.0 754
MS.gene44096.t1 MTR_7g094810 56.113 638 275 2 14 646 6 643 0.0 751
MS.gene44096.t1 MTR_4g129310 58.833 600 197 3 25 592 29 610 0.0 673
MS.gene44096.t1 MTR_1g072280 51.724 609 293 1 7 614 3 611 0.0 659
MS.gene44096.t1 MTR_5g034140 70.460 457 131 1 173 629 13 465 0.0 650
MS.gene44096.t1 MTR_7g094810 56.284 549 239 1 14 561 6 554 0.0 647
MS.gene44096.t1 MTR_7g094810 55.877 553 239 2 14 561 6 558 0.0 644
MS.gene44096.t1 MTR_7g094810 56.769 458 197 1 14 470 6 463 0.0 541
MS.gene44096.t1 MTR_5g034660 66.172 337 86 1 310 646 12 320 1.45e-147 430
MS.gene44096.t1 MTR_4g123543 55.000 180 55 4 487 643 4 180 1.71e-53 181
MS.gene44096.t1 MTR_8g010670 39.228 311 147 10 7 295 22 312 1.11e-47 175
MS.gene44096.t1 MTR_1g060400 44.828 116 60 3 7 120 83 196 4.61e-18 83.2
MS.gene44096.t1 MTR_4g105060 45.122 82 45 0 214 295 17 98 1.04e-12 65.1
MS.gene44096.t1 MTR_4g073250 29.143 175 114 5 17 182 7 180 1.24e-12 67.4
MS.gene44096.t1 MTR_8g075240 27.746 173 115 4 17 180 7 178 8.05e-11 62.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene44096.t1 AT5G27540 68.259 649 202 3 1 646 1 648 0.0 890
MS.gene44096.t1 AT5G27540 68.259 649 202 3 1 646 1 648 0.0 890
MS.gene44096.t1 AT3G63150 58.610 633 261 1 13 644 11 643 0.0 787
MS.gene44096.t1 AT3G05310 53.689 637 283 6 17 644 15 648 0.0 701
MS.gene44096.t1 AT3G05310 54.743 506 217 6 148 644 1 503 0.0 564
MS.gene44096.t1 AT3G05310 55.165 484 205 6 148 622 1 481 0.0 536
MS.gene44096.t1 AT4G35020 29.714 175 113 4 17 182 7 180 5.64e-13 68.6
MS.gene44096.t1 AT4G35020 29.714 175 113 4 17 182 7 180 5.64e-13 68.6
MS.gene44096.t1 AT4G35020 29.714 175 113 4 17 182 7 180 5.64e-13 68.6
MS.gene44096.t1 AT2G44690 29.143 175 114 5 17 182 19 192 2.92e-11 63.9
MS.gene44096.t1 AT1G20090 29.480 173 112 5 17 180 6 177 3.50e-11 63.5
MS.gene44096.t1 AT1G75840 29.480 173 112 5 17 180 7 178 6.29e-11 62.8
MS.gene44096.t1 AT4G35950 27.746 173 115 4 17 180 7 178 8.68e-11 62.4
MS.gene44096.t1 AT4G28950 27.907 172 118 3 17 182 7 178 8.97e-11 62.4
MS.gene44096.t1 AT3G51300 30.058 173 111 5 17 180 7 178 9.01e-11 62.4

Find 155 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTCTTTCCAGCTTCAGTTTC+TGG 0.055140 1.3:-58426349 None:intergenic
TCGCGGAACTGTTGCATTAT+TGG 0.162225 1.3:-58421466 None:intergenic
TTGAAAATTTAAGTACATTT+TGG 0.188192 1.3:+58420996 MS.gene44096:CDS
TTGGCGACATCACCTGTTCT+AGG 0.278809 1.3:-58421447 None:intergenic
GGATTATAAGCTTCAGAATA+TGG 0.283134 1.3:-58423793 None:intergenic
TGAATCATTTGATGCTGATT+TGG 0.301248 1.3:+58422452 MS.gene44096:CDS
AGGAAAGCAATCTACCTTTC+CGG 0.302489 1.3:-58422655 None:intergenic
TGTGCATAGTAGAAAACTTC+AGG 0.319763 1.3:-58421643 None:intergenic
GGAAAGCAATCTACCTTTCC+GGG 0.324845 1.3:-58422654 None:intergenic
CCCTCACCTCCGCAACTTAG+AGG 0.339641 1.3:+58421021 MS.gene44096:CDS
TGGACTGTGCTCAGAAAGTT+TGG 0.340975 1.3:+58422176 MS.gene44096:CDS
GGTGGCCGACAAGGAGTCTT+TGG 0.356422 1.3:+58424099 MS.gene44096:CDS
GGAACGGCAGTGGCGGTTGT+TGG 0.364982 1.3:+58426992 MS.gene44096:CDS
TTGTTGGGATCGGTGCTTAC+AGG 0.370590 1.3:+58427008 MS.gene44096:CDS
ATACCAATCAGTGTGAAGTT+AGG 0.375933 1.3:+58426265 MS.gene44096:CDS
AGAAGGTGAAGTTGCAAGTC+TGG 0.383575 1.3:+58424078 MS.gene44096:CDS
GATCTTGTTAATCTGCTTGC+GGG 0.398913 1.3:-58426371 None:intergenic
TGTGTTTCTTGATCAAATAA+AGG 0.399311 1.3:-58421691 None:intergenic
TTAGGTCTGACGAGTCTTCA+TGG 0.405485 1.3:+58424697 MS.gene44096:intron
GATCTCTTGGTACAGATTGC+TGG 0.405559 1.3:+58424732 MS.gene44096:CDS
GCATTGAGTGTTCAGCATCT+AGG 0.406021 1.3:+58421500 MS.gene44096:CDS
GCAATATTGAATTCTTTCAT+TGG 0.414222 1.3:+58423677 MS.gene44096:CDS
TCCCCTAACTTCACACTGAT+TGG 0.415952 1.3:-58426268 None:intergenic
TACCAATCAGTGTGAAGTTA+GGG 0.416681 1.3:+58426266 MS.gene44096:CDS
TTGCAACCGACCACTATAAC+TGG 0.418708 1.3:-58421391 None:intergenic
AGATCAACAGCTAGCGTAGT+AGG 0.425134 1.3:-58419536 None:intergenic
TTTGAAGCGCACTCCTGATC+AGG 0.425956 1.3:+58422241 MS.gene44096:CDS
GCTGATGAGACTTGATTTAC+CGG 0.428089 1.3:-58419465 None:intergenic
CTCATATAGATTTCCGATCC+AGG 0.429933 1.3:-58422859 None:intergenic
GGTACGAGCGTGTGGGTTAA+CGG 0.433056 1.3:-58419408 None:intergenic
CCATCATCGATACTTCTTCT+CGG 0.435787 1.3:+58419582 MS.gene44096:CDS
AGTTGCAGCTAAGGATGATC+TGG 0.438808 1.3:+58424794 MS.gene44096:CDS
GAACGGCAGTGGCGGTTGTT+GGG 0.440689 1.3:+58426993 MS.gene44096:CDS
GCTGGTCATGGAGAAAATAC+TGG 0.440820 1.3:+58424750 MS.gene44096:CDS
GCTGTTGAAAGAAATGCATT+TGG 0.442039 1.3:+58422885 MS.gene44096:CDS
TGAATGTTGTTGATATATCT+AGG 0.442883 1.3:+58423839 MS.gene44096:CDS
GTCACACGGACAGCAGATAA+TGG 0.445144 1.3:-58423563 None:intergenic
AGACTTGCAACTTCACCTTC+TGG 0.457494 1.3:-58424076 None:intergenic
ATATCAACGGTCACCTATCA+TGG 0.457862 1.3:-58424147 None:intergenic
GAACGAGGACTTACTTTGAC+GGG 0.459244 1.3:+58422101 MS.gene44096:CDS
AAACAATTCTTCAAGTTCAC+GGG 0.465593 1.3:-58422623 None:intergenic
TGATCAAATAAAGGAGCTGT+TGG 0.469295 1.3:-58421682 None:intergenic
AGGCAAAACGGGAGCAACAT+TGG 0.470705 1.3:-58419513 None:intergenic
GAAGTATCGATGATGGTGAT+AGG 0.472412 1.3:-58419575 None:intergenic
TATTGAATTCTTTCATTGGA+AGG 0.472632 1.3:+58423681 MS.gene44096:CDS
TTTACACCCACAATTTCTGC+TGG 0.474302 1.3:-58422041 None:intergenic
GGCAAAACGGGAGCAACATT+GGG 0.482167 1.3:-58419512 None:intergenic
CTTAGCTGCAACTATAAGAC+AGG 0.483488 1.3:-58424784 None:intergenic
GCTCAGCAGCAGTTACAATT+CGG 0.484471 1.3:-58426309 None:intergenic
GCTGCAAGGAAGAGTGCATC+TGG 0.485620 1.3:+58427037 MS.gene44096:CDS
GACTTGATTTACCGGTCCCT+TGG 0.485745 1.3:-58419457 None:intergenic
TCAGGAGTGCGCTTCAAAGT+TGG 0.487194 1.3:-58422236 None:intergenic
AACTTCACACTGATTGGTAT+AGG 0.487429 1.3:-58426262 None:intergenic
GAGGGTATCATATGATCTCT+TGG 0.490199 1.3:+58424719 MS.gene44096:CDS
GCGTGTGGGTTAACGGTGTT+AGG 0.492132 1.3:-58419401 None:intergenic
TGGCTATACAAGAGTCAACT+AGG 0.492631 1.3:+58424829 MS.gene44096:CDS
TCTTGTATAGCCAATGCAAA+TGG 0.492757 1.3:-58424819 None:intergenic
AACATTGGGACGGAAATTCT+CGG 0.493928 1.3:-58419498 None:intergenic
AGCATTCCAGAAACTGAAGC+TGG 0.495802 1.3:+58426343 MS.gene44096:CDS
AGCGTAGTAGGAGGCAAAAC+GGG 0.497639 1.3:-58419524 None:intergenic
AAAACAATTCTTCAAGTTCA+CGG 0.499099 1.3:-58422624 None:intergenic
ACCTCTAAGTTGCGGAGGTG+AGG 0.499578 1.3:-58421022 None:intergenic
AGATTCTCCACACTGAAGGC+CGG 0.501163 1.3:-58423515 None:intergenic
TATAGTGGTCGGTTGCAAGC+TGG 0.505286 1.3:+58421396 MS.gene44096:CDS
CTGTCTTATAGTTGCAGCTA+AGG 0.507445 1.3:+58424785 MS.gene44096:CDS
TAGCGTAGTAGGAGGCAAAA+CGG 0.508320 1.3:-58419525 None:intergenic
CCTCTAAGTTGCGGAGGTGA+GGG 0.508445 1.3:-58421021 None:intergenic
TTGGTACAGATTGCTGGTCA+TGG 0.509199 1.3:+58424738 MS.gene44096:CDS
GCATAACGATCCTCGTTGGT+TGG 0.510674 1.3:-58423814 None:intergenic
GTTTCTGGAATGCTTAAATG+AGG 0.512018 1.3:-58426334 None:intergenic
TCAGCAGGTGAGCCTAGAAC+AGG 0.512798 1.3:+58421435 MS.gene44096:CDS
GTGCATAGTAGAAAACTTCA+GGG 0.515784 1.3:-58421642 None:intergenic
AGAAATTGTGGGTGTAAAGA+AGG 0.519772 1.3:+58422046 MS.gene44096:CDS
GTGGAGAATCTAATATACAT+AGG 0.520845 1.3:+58423527 MS.gene44096:CDS
TTCAGCATCTAGGCTTATCC+AGG 0.522194 1.3:+58421510 MS.gene44096:CDS
CTAATATACATAGGGTTCCC+TGG 0.523491 1.3:+58423536 MS.gene44096:CDS
GATTCTCCACACTGAAGGCC+GGG 0.523700 1.3:-58423514 None:intergenic
ATGGTGATAGGAACACGATC+AGG 0.525859 1.3:-58419563 None:intergenic
TTAAATTGCAGTCCCTGGAT+CGG 0.528106 1.3:+58422846 MS.gene44096:intron
GCAGTGGCGGTTGTTGGGAT+CGG 0.530555 1.3:+58426998 MS.gene44096:CDS
TATTGCAGTTGGAACGGCAG+TGG 0.531844 1.3:+58426982 MS.gene44096:intron
TGATCTGGATCCATTTGCAT+TGG 0.534252 1.3:+58424809 MS.gene44096:CDS
TCTAAAGCCTCGATGTGTGC+GGG 0.535241 1.3:+58421717 MS.gene44096:CDS
TCTGCAACCAGCAGAAATTG+TGG 0.536632 1.3:+58422034 MS.gene44096:CDS
ACGGAAATTCTCGGTGGAAG+CGG 0.536641 1.3:-58419489 None:intergenic
CGAACGAGGACTTACTTTGA+CGG 0.540399 1.3:+58422100 MS.gene44096:CDS
TAGTCAGGACATGGGAGTAG+AGG 0.542994 1.3:+58426237 MS.gene44096:CDS
TATCTGCTGTCCGTGTGACT+AGG 0.544245 1.3:+58423567 MS.gene44096:CDS
AGATCTTGTTAATCTGCTTG+CGG 0.547096 1.3:-58426372 None:intergenic
AATCTACCTTTCCGGGGCAG+TGG 0.547915 1.3:-58422647 None:intergenic
GTCGCAGGTGACCAAGGGAC+CGG 0.548644 1.3:+58419446 MS.gene44096:CDS
TGCAAGTCTGGTGGCCGACA+AGG 0.549035 1.3:+58424090 MS.gene44096:CDS
CTGCAACCAGCAGAAATTGT+GGG 0.549445 1.3:+58422035 MS.gene44096:CDS
CTGGATCGGAAATCTATATG+AGG 0.550319 1.3:+58422860 MS.gene44096:CDS
AGTTGCTGAAGAACTACAGC+GGG 0.551247 1.3:+58420928 MS.gene44096:CDS
GTTGAAAGAAATGCATTTGG+AGG 0.551896 1.3:+58422888 MS.gene44096:CDS
CCGAGAAGAAGTATCGATGA+TGG 0.552250 1.3:-58419582 None:intergenic
AATGAAAGAATTCAATATTG+CGG 0.552562 1.3:-58423675 None:intergenic
GCATTATATTGCAGTTGGAA+CGG 0.557149 1.3:+58426976 MS.gene44096:intron
ACAATTTCTGCTGGTTGCAG+AGG 0.560104 1.3:-58422032 None:intergenic
TGGAGAATCTAATATACATA+GGG 0.562219 1.3:+58423528 MS.gene44096:CDS
TGCAGTTGGAACGGCAGTGG+CGG 0.562789 1.3:+58426985 MS.gene44096:intron
TTTGTAGGTTAGTCAGGACA+TGG 0.562907 1.3:+58426228 MS.gene44096:intron
ACAGCAGATAATGGTTCACC+AGG 0.564443 1.3:-58423554 None:intergenic
GGAGTTCGTATCGTCGTCGC+AGG 0.572629 1.3:+58419431 MS.gene44096:CDS
TGAGGCCAAAGACTCCTTGT+CGG 0.573193 1.3:-58424104 None:intergenic
GGTGAATGTTCCAGTTATAG+TGG 0.576220 1.3:+58421381 MS.gene44096:intron
TATTAGATTCTCCACACTGA+AGG 0.576787 1.3:-58423519 None:intergenic
ATCGTCGTCGCAGGTGACCA+AGG 0.577121 1.3:+58419440 MS.gene44096:CDS
CGAACTCCGGTACGAGCGTG+TGG 0.577179 1.3:-58419416 None:intergenic
TTTGCGAGATGAAAATCAGC+AGG 0.578705 1.3:+58421420 MS.gene44096:CDS
GTTAACCCACACGCTCGTAC+CGG 0.581525 1.3:+58419410 MS.gene44096:CDS
CTCTAAAGCCTCGATGTGTG+CGG 0.582022 1.3:+58421716 MS.gene44096:CDS
TTTATTCTCTGCGACTCAGA+CGG 0.583863 1.3:+58421754 MS.gene44096:CDS
TCATATAGATTTCCGATCCA+GGG 0.585821 1.3:-58422858 None:intergenic
CACAGCATAACGATCCTCGT+TGG 0.586419 1.3:-58423818 None:intergenic
AAGGGCGTCTTGAGACTACA+TGG 0.586969 1.3:+58422156 MS.gene44096:CDS
AATGTTCCAGTTATAGTGGT+CGG 0.588860 1.3:+58421385 MS.gene44096:CDS
CTCTGCGACTCAGACGGAGA+TGG 0.593421 1.3:+58421760 MS.gene44096:CDS
GATGTGTGCGGGCTTTGAAG+CGG 0.597496 1.3:+58421728 MS.gene44096:CDS
TCAACAGCTAGCGTAGTAGG+AGG 0.609717 1.3:-58419533 None:intergenic
GTCTGACGAGTCTTCATGGA+GGG 0.609739 1.3:+58424701 MS.gene44096:CDS
TCGTCGTCGCAGGTGACCAA+GGG 0.611404 1.3:+58419441 MS.gene44096:CDS
TGCGACGACGATACGAACTC+CGG 0.614900 1.3:-58419429 None:intergenic
TGGAGAAAATACTGGCTATG+AGG 0.616701 1.3:+58424758 MS.gene44096:CDS
GGCTATACAAGAGTCAACTA+GGG 0.620017 1.3:+58424830 MS.gene44096:CDS
AGATCATAACCTCTAAGTTG+CGG 0.621424 1.3:-58421030 None:intergenic
TTGTAGGTTAGTCAGGACAT+GGG 0.627839 1.3:+58426229 MS.gene44096:intron
CAATGCAAGTTTCAATCTCG+CGG 0.629625 1.3:-58421483 None:intergenic
GAATGTTGTTGATATATCTA+GGG 0.630141 1.3:+58423840 MS.gene44096:CDS
GTGCAAGATAAATTGTCTGA+AGG 0.633010 1.3:+58422071 MS.gene44096:CDS
AGGTGAAGTTGCAAGTCTGG+TGG 0.637915 1.3:+58424081 MS.gene44096:CDS
GTCTATCACATGCATAAGTG+AGG 0.647194 1.3:-58420964 None:intergenic
CGCGTCGCTTCCTAGTCACA+CGG 0.647450 1.3:-58423577 None:intergenic
TTCAAAGCCCGCACACATCG+AGG 0.648111 1.3:-58421724 None:intergenic
CTTACAGGATATATGCTGCA+AGG 0.651354 1.3:+58427023 MS.gene44096:CDS
TCTAAACCCGGCCTTCAGTG+TGG 0.651361 1.3:+58423508 MS.gene44096:CDS
ACCAATCAGTGTGAAGTTAG+GGG 0.655652 1.3:+58426267 MS.gene44096:CDS
TCATAACCTCTAAGTTGCGG+AGG 0.656386 1.3:-58421027 None:intergenic
AACAATTCTTCAAGTTCACG+GGG 0.662807 1.3:-58422622 None:intergenic
GAAAGCAATCTACCTTTCCG+GGG 0.665164 1.3:-58422653 None:intergenic
CAGCAGCAGTTACAATTCGG+CGG 0.665217 1.3:-58426306 None:intergenic
AAACGGGAGCAACATTGGGA+CGG 0.668424 1.3:-58419508 None:intergenic
ACTCATGACACTTCTAAACC+CGG 0.676807 1.3:+58423496 MS.gene44096:CDS
GAACTCCGGTACGAGCGTGT+GGG 0.684411 1.3:-58419415 None:intergenic
GTGTTGAAAGAGATTCCAGA+AGG 0.690451 1.3:+58424061 MS.gene44096:CDS
TCTGCATCATCAATGGCGAG+AGG 0.695615 1.3:+58419374 None:intergenic
TCTGAAGGTGTTAACGAACG+AGG 0.697614 1.3:+58422086 MS.gene44096:CDS
TTAGCTGCAACTATAAGACA+GGG 0.712396 1.3:-58424783 None:intergenic
CAGCAGATAATGGTTCACCA+GGG 0.731463 1.3:-58423553 None:intergenic
ATTGGGACGGAAATTCTCGG+TGG 0.733960 1.3:-58419495 None:intergenic
AGCTTATAATCCAACCAACG+AGG 0.743058 1.3:+58423804 MS.gene44096:CDS
GAGTTGCTGAAGAACTACAG+CGG 0.746847 1.3:+58420927 MS.gene44096:CDS
GGTCTGACGAGTCTTCATGG+AGG 0.756034 1.3:+58424700 MS.gene44096:intron
ACATGCATAAGTGAGGACAA+CGG 0.771471 1.3:-58420957 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content


Chromosome Type Strat End Strand Name
chr1.3 gene 58419386 58427063 58419386 ID=MS.gene44096
chr1.3 mRNA 58419386 58427063 58419386 ID=MS.gene44096.t1;Parent=MS.gene44096
chr1.3 exon 58419386 58419603 58419386 ID=MS.gene44096.t1.exon1;Parent=MS.gene44096.t1
chr1.3 CDS 58419386 58419603 58419386 ID=cds.MS.gene44096.t1;Parent=MS.gene44096.t1
chr1.3 exon 58420910 58421042 58420910 ID=MS.gene44096.t1.exon2;Parent=MS.gene44096.t1
chr1.3 CDS 58420910 58421042 58420910 ID=cds.MS.gene44096.t1;Parent=MS.gene44096.t1
chr1.3 exon 58421382 58421531 58421382 ID=MS.gene44096.t1.exon3;Parent=MS.gene44096.t1
chr1.3 CDS 58421382 58421531 58421382 ID=cds.MS.gene44096.t1;Parent=MS.gene44096.t1
chr1.3 exon 58421640 58421816 58421640 ID=MS.gene44096.t1.exon4;Parent=MS.gene44096.t1
chr1.3 CDS 58421640 58421816 58421640 ID=cds.MS.gene44096.t1;Parent=MS.gene44096.t1
chr1.3 exon 58422014 58422262 58422014 ID=MS.gene44096.t1.exon5;Parent=MS.gene44096.t1
chr1.3 CDS 58422014 58422262 58422014 ID=cds.MS.gene44096.t1;Parent=MS.gene44096.t1
chr1.3 exon 58422405 58422473 58422405 ID=MS.gene44096.t1.exon6;Parent=MS.gene44096.t1
chr1.3 CDS 58422405 58422473 58422405 ID=cds.MS.gene44096.t1;Parent=MS.gene44096.t1
chr1.3 exon 58422607 58422662 58422607 ID=MS.gene44096.t1.exon7;Parent=MS.gene44096.t1
chr1.3 CDS 58422607 58422662 58422607 ID=cds.MS.gene44096.t1;Parent=MS.gene44096.t1
chr1.3 exon 58422857 58422938 58422857 ID=MS.gene44096.t1.exon8;Parent=MS.gene44096.t1
chr1.3 CDS 58422857 58422938 58422857 ID=cds.MS.gene44096.t1;Parent=MS.gene44096.t1
chr1.3 exon 58423491 58423702 58423491 ID=MS.gene44096.t1.exon9;Parent=MS.gene44096.t1
chr1.3 CDS 58423491 58423702 58423491 ID=cds.MS.gene44096.t1;Parent=MS.gene44096.t1
chr1.3 exon 58423792 58423861 58423792 ID=MS.gene44096.t1.exon10;Parent=MS.gene44096.t1
chr1.3 CDS 58423792 58423861 58423792 ID=cds.MS.gene44096.t1;Parent=MS.gene44096.t1
chr1.3 exon 58424043 58424155 58424043 ID=MS.gene44096.t1.exon11;Parent=MS.gene44096.t1
chr1.3 CDS 58424043 58424155 58424043 ID=cds.MS.gene44096.t1;Parent=MS.gene44096.t1
chr1.3 exon 58424701 58424851 58424701 ID=MS.gene44096.t1.exon12;Parent=MS.gene44096.t1
chr1.3 CDS 58424701 58424851 58424701 ID=cds.MS.gene44096.t1;Parent=MS.gene44096.t1
chr1.3 exon 58426235 58426421 58426235 ID=MS.gene44096.t1.exon13;Parent=MS.gene44096.t1
chr1.3 CDS 58426235 58426421 58426235 ID=cds.MS.gene44096.t1;Parent=MS.gene44096.t1
chr1.3 exon 58426990 58427063 58426990 ID=MS.gene44096.t1.exon14;Parent=MS.gene44096.t1
chr1.3 CDS 58426990 58427063 58426990 ID=cds.MS.gene44096.t1;Parent=MS.gene44096.t1
Gene Sequence

>MS.gene44096

ATGGCGAGAGGTGTACCTAACACCGTTAACCCACACGCTCGTACCGGAGTTCGTATCGTCGTCGCAGGTGACCAAGGGACCGGTAAATCAAGTCTCATCAGCACCGCTTCCACCGAGAATTTCCGTCCCAATGTTGCTCCCGTTTTGCCTCCTACTACGCTAGCTGTTGATCTTTATCCTGATCGTGTTCCTATCACCATCATCGATACTTCTTCTCGGTAAGAAAATTTCACGTTCTTCTTTAGATTCCTTCATTAGCAACTTAATCACGTTTTTTAATTTTTAATAATTGACGCATGAATTGGAATCGATTAGGCTAAAGCACTGGTGTTTTGATTTTTCAAAAGAATTAAAACTGAGAATTGGAGTTACTTTTTGTATTATTACAGCTTATTTGCAGCTTATATCACAATAATTGTTAGATTGTTTTTGTATTTGCTAAAGTTATGTTTACAAGCTATATTGGAAAACTTATGAAAATAAGCCAGAAAAAAGCTTGTGAAAATTGTCATAAGCTGTTTTCATAAATTCTATAAGTTTGCACAAACTATTTCAATAGCAAAAGAAAAAATAACTGTTAAATTGTTCTCGTATATGCCATAGAATGTTTTTACTTTTTACAAGCTATATTGTAGAACTTATGAACTTAAGCCGAAAAAAAGCTTGTGAAAACTGTCGTAAGCTGTTTTCACAAATTCTTTGCTCACGCTATTTTTATAGCAAAAGATAAAATAATTGTTAAATTGTGTTTTGTATATGTTATAAGTTGTTTTTACAAGCTATATTGGAGCTTATGAACATAAGTTGAAAAAAGCTTATGAAAATTATAATAAGCTGTTTTCATAAATTCTTTAAGATTGCATTTGCTATTTTTACAGCGAAAGATAAAATAACTGTTGAATTGTTTTTGTATATGCTTGCTATAAGTTGTTTTTACTCGCTATATCGGAGCTTATGAAAATAAGTTAAAAAAAGCTTATGAAAATTTTCATAAGCTGTATTCATAAATTCTATAAGCTTGCACAAGCTATTTTTATAGCAAAAGATAAAATGATAGTTAATTTAATTGTGTATATGCTACAAGTTGTTTTTACAAGGTATGTTGTAGAACTAATGACAATAAGTTGAAAAAGCTTATCAAAATTGTCATGAGTTTTCATAAATTCTCCGAAACAGTCACGCAAAACTTATGCCGTTAGATAAGCTTAAATAAGCCAATCCAAACAGGCCCTAAATCTGTAACATAATTTGGAGTTGATGTTTGAGACCATTTTGGTTTTTGAGTTGTTTGTTGATCAATATAGTCATATTATGTTAAGTTTTTATTTATTTATTGAATTATGTTTATGTTATATATTTGCCTAATAAGAGAATACATAAAAGCTTACACTGCAATATGCATTTCATGCTTATTTTTTTTTTTTTTTATCTATATGTTATCGCCAAGGAAGTGTTTACCCTAATCTGAATGTTAACCATTTTACTTTATTGTTCCTGTGCTTATTATTGTTATTCTTTTTGCAGTGTTGCGGACAGCGATCGAGTTGCTGAAGAACTACAGCGGGCTGACACCGTTGTCCTCACTTATGCATGTGATAGACCCGAGACACTTGAAAATTTAAGTACATTTTGGCTCCCTCACCTCCGCAACTTAGAGGTTATGATCTCTCCTGTTATTGTTTTTGTGTCTTAAGTATTCTATACTCATTGCAATTCCTTTAGCCCCCCTCCCCCCTTCCCTAAATGAATAAATAGAATAAAAGAGGGACAAAATTAATATGCTACAAGAATGGAAGGGGAAAACTTGATATAGATAGGTATAAACTGTTAAACCAGTTACACTCATCTTTTATGTAAGAACATCTATTCATATATACTTGTTTGTATACAGATGCTAATTGTACAACTTAATTTAAATTCACATTAAATGCTTGTATTTTCATTTTCAGAGAGAATTAATGCTTGACATAAATATTTGACTGAATTTCATTAACAGGTGAATGTTCCAGTTATAGTGGTCGGTTGCAAGCTGGATTTGCGAGATGAAAATCAGCAGGTGAGCCTAGAACAGGTGATGTCGCCAATAATGCAACAGTTCCGCGAGATTGAAACTTGCATTGAGTGTTCAGCATCTAGGCTTATCCAGGTATCTTTCATTCATACTATTGCAATCAGATTCCTCCTTTGTTGAAATGTTATTTCGGTGCTGCAATTATGTCTTTCATACAATTGTAATTGAATTTTCTTTCTGAAGGTCCCTGAAGTTTTCTACTATGCACAAAAGGCTGTTCTTCATCCAACAGCTCCTTTATTTGATCAAGAAACACAAACTCTAAAGCCTCGATGTGTGCGGGCTTTGAAGCGGATTTTTATTCTCTGCGACTCAGACGGAGATGGTGCACTAAGCGATGCTGAACTGAACGATTTTCAGGTTTGACTTTTTCCTTCTCATATTGAATGTCAAAATTGTGGCTTGCTTATTATCCAAGTATTATAACATGACACGTTTATTATGTGAGTATTATGACATGTCACCTTTATTATCTGAGTATTATGACATGACACCTTTATTATCGTAGGTTAACCTTTGTATAAGATTTGTGAAAAATCTAACCAAACTATCTACAGGTTAGATGTTTCAATGCTCCTCTGCAACCAGCAGAAATTGTGGGTGTAAAGAAGGTTGTGCAAGATAAATTGTCTGAAGGTGTTAACGAACGAGGACTTACTTTGACGGGATTTCTATTTCTTCATGCCCTTTTCATAGAAAAAGGGCGTCTTGAGACTACATGGACTGTGCTCAGAAAGTTTGGATATAATGATGAAATCAAGCTTGCTGATGATGCAATTCCAACTTTGAAGCGCACTCCTGATCAGGTGTTTTTTTATTCTCTTTTTTCTAGTTGAATCTTGGCCTTGTGAATTATGCTCTTTATACGTTATACCTGTTTTGTGTTCAATTTGTTGACAACTTGGATCTTATATCTTACTCTATTCTCTTTGGATTTAATGTTTGCAGAGTGTTGAATTGACACATGAAGCAATTGATTTCTTGAAGACAACTTTTGAATCATTTGATGCTGATTTGGTATGTCCTTTTGCGCATGTGACCCTGAATAATTTTACTTTTCTTGCTGCTCCCCAATCATTTTCAGACATTTTCTCTACTGACTTTATCGCTGCACAGTTTGCAAATTAACCACATATTTTCCTTCATCTAGGATGGGATGTTGCGTCCCCGTGAACTTGAAGAATTGTTTTCCACTGCCCCGGAAAGGTAGATTGCTTTCCTAATATTATGACACGGAATCTTCTGTTGGGTAATTTTTCAAATGTACACACGACAGGGTGTGTTTTATATAATATACTTCCGAGTCTTTGCTTCTTCACTGTTTAAGTCCAGCTATGACATAATTTACATGTGAGGACCCTTGGCAATGTTATTTGATATTTTACAATTTTAAATTGCAGTCCCTGGATCGGAAATCTATATGAGGATGCTGTTGAAAGAAATGCATTTGGAGGACTATCGCTTGATGCATTTTTGTCCGAGGTGCACGAGTCTTCTATTTTTGTCTCTAGTCCCTCTTCCTTGCATTTTTGTTGAACAATGTTCATAGAAGAGTGGTGGGCTTCCATGGTTAATTTTATCACTCAATTTAAGTAGTGTTTTTAGAATCAAGGTTGCCTCAGATTTACATGATGTTTGTCTGGTCTGTGTATCTTTTCAATGCATGTACGATTTATTTGCATCACCATTGACTTTTTTAAGATATATATGTTCGTATAAGAGTGGTGGGCTTCTATGGATGGTTTTATCACTCAATTTAAATTGTGTTATGGAATCAATGTTGCCTAAGTTTCGCATTTATTTGCATAACCATTGATATTTTAAGATATATTTTTTGAACAATGTCTGTAGAAGAGTCGCGGGTTTCTATGGAAAGTTTTATCACTCTATTTAAATAGTGTTTGAGAATCAAGATTGCTTCAGTTTTACATGATGTATGACTGTATGTATGGTCTGTGTATCTTTTCAATGCATATAACATTTATTTGTATCACAATTGATATTTTAAAGAGAAATTATATGTTTTCTGGACAGTGGGCACTCATGACACTTCTAAACCCGGCCTTCAGTGTGGAGAATCTAATATACATAGGGTTCCCTGGTGAACCATTATCTGCTGTCCGTGTGACTAGGAAGCGACGCGTAGATCGCAAGAAACAAAATTCAGAAAGAAATGTATTGCAGTGCTTCGTTTTTGGGCCTAGAAAGTCCGGAAAATCCGCAATATTGAATTCTTTCATTGGAAGGTATTTTCGTTTTGTACCTAGAAGGCTCCTGATAATATAGATTTAATTATCCGGCATCATGTCTTATTGCTGTTGAATTCATACTGCAGGCCATATTCTGAAGCTTATAATCCAACCAACGAGGATCGTTATGCTGTGAATGTTGTTGATATATCTAGGGTAAATGTTGTTGATATTTCTAGGGTACAATAATTACTTGGCTGGCATTTGATAATAACTTCTTACTGTGACAGGAAGACATTTAATTTATTTCACTTTTTGCCGCACCAGAGTCTTCATTTTTTTTGTCAATCTTTGTATTTATATCTCAAAATTCATGATTTTATTGTTTTGTTTGCAGGAAAACAGAAAATATCTCGTGTTGAAAGAGATTCCAGAAGGTGAAGTTGCAAGTCTGGTGGCCGACAAGGAGTCTTTGGCCTCATGTGACATTGCAGTTTTTGTCCATGATAGGTGACCGTTGATATTAAATATTTTGGTGCCTGTGGTGTATATAAATTTGAATATTGCCACTCGTTTCTTTGAATTTTTAGTTCATAAGCATATTTTCCTAAAATAACGTTAGGCTGAATACCACAATTTCGGGGTTGATTTTTCAAACTCATGATGGTGAAAACCCCCTCCAGTCTCGTTTATAAGCAAAAAAAAAACCTAATTTCACACTAGTTTTACAGTTTTTGTTAAATGTAACAAAAACATTAATTGTACTTCAAGGAAAATAAATTAGTGATGGAAGATGTTCCAAGGAAATAAAAGAGTTATTGGAAAATAAAAACTATAAATTTAGGGATGTTTCAGTGAAGATGTTATTCAACATGGGTGGAAGTAAATAAATTTGCTGATATTTTAGTGCATCAAACATGCGTGTTTGCCTATAAATTTGCTTATAAGTTAACTGTAATTTAATGTTCATGTGATCTGGACCATAAGCAACTCATACTAAGTACCTGGAAAAAATTTGGTTGTATAAAGCTTAGCTGATTAAAAATTTATTTTAGGTCTGACGAGTCTTCATGGAGGGTATCATATGATCTCTTGGTACAGATTGCTGGTCATGGAGAAAATACTGGCTATGAGGTGCCCTGTCTTATAGTTGCAGCTAAGGATGATCTGGATCCATTTGCATTGGCTATACAAGAGTCAACTAGGGTATTTTTCGTTAACTTATTAATTTGCATGATCATATACATAATTGTTGGATGTTTAGATAAATAGAGATTTAATGCGGCGAATGGACACATTTTGGAACTATGATTTCATCCAAAATTTTCTGATATGCAATAATTATATTATATAGCATGTAGTAGTCTATGTATATATGCTTTAATCTTTAAATTGAAATTTGATTAAGCTGATTGAAAACTAGTTCTATTTTTCTTGTTTCACTTTTTTTATATTGTGATGTTTTGAATTTTTGACATTTTTTTTTTCGCATTTCCATTTTACTGCTGTATGCCATCTTTGAATGGCAGTTTTATGCTATTAACTATGATTTTGGAAATATTGCTATACCTGTTTCAAGCAGAAGTTTTATTTGGCTCTACAAATCATCTGGGATTTATTAACTTTGATTTGCCTTTACAATTAGACAGTTTCCACTCTTATTACAACACTTTCATGTGCATTAGTATAGGTTCGTGTTCTGATATATGTTCAATTAAAATCTGTTAGTTGCAGACTTGTAGCTAGAAACCTGATATTGTTTTATGTCGTTGTTTGCATTTGATCCTATTATATTTGGAAAGTTACATTTTTCAACGTTTTCTACTGACTTGCAAGCATAGAGTGAAGAGAATACTGTCTTTTCCATCTATGGGTATCATCTACAATCAATGATGTGCCAATAAGCACAGCTGAGTGTTAGAATAGATTGTTAGGAGAAATGTTGTATTCTCATGTCTTCCTTGGCATATATAATCACGGCATATCTTCCTTGTCAAGAAAAAGAGCCGTCTTTACAATTAGACAATTTGCACTCTTATTACAACACTTTCATGCGCATTTAGTATAGGTCCGTGTTCTATCTATGCTTAATTAATCTGTTAGTTGCAGATTTGTAGCTAAAAACCTGGTACTCTTGGAGTTCATTTTGTGTCTTTGTTTGCATTTGATCCATATATATTTGGAAGCTACTGACTTGCAAGCTATGAAGCACGGATATGGACACAGACACTGACATGCCGACATCGCTAATAATTTGAGAAAATCACATATTTCAGTGTAATTATAAGTGTCGGTGTCGGACATGACACATGTCCGACACGAGGACATGCCTAATGCCAGGAGTGTCCGTGCTTCATAGCTTGCAAGCAAAGGTAAAGAGTGAAGAGAATACTGTTAGCTTTTCCATTTATGGGTATCATCTACAAGGAATGATGTACTGATAAGCATAGCTGAGTGTTAGAGGAGATTGTCAGGAAAAATGATGTGTTCTTATGCCTTCCATAGCATATATAATCATGGCATATGTGATTTCTTGATGGTGAAGTTTTTTAAACAACTTATCTTCGGACATGGCAATGTGTTTTGTAGGTTAGTCAGGACATGGGAGTAGAGGCTCCTATACCAATCAGTGTGAAGTTAGGGGATTTCAACAGTTTATTCCGCCGAATTGTAACTGCTGCTGAGCATCCTCATTTAAGCATTCCAGAAACTGAAGCTGGAAAGACCCGCAAGCAGATTAACAAGATCTTATCGCGATCTCTTTTGTGTGTTTCAGGTATATCAGTTTTCAGATTGATTTGTTAGTTGTTCATTAATTTTCATTTAACTTCATATGTTAAAGCTGTTCAGTCTTGTATGCTAACTAATAAAAATAGCCTATTTAACCTACTTAAATTTTGGGTGACATGGTTTAATTTGTTTGTGTGTTCTCTCTTTTGGTTTCATAGTTCATTTTGATTTTGCAATGATCTGTCATTTATAACCTTGAGGTGTTATGCAACTGAAGTGGTGGCTATTTGTGTTTCAGTTAAGCTTGTTTTGTTTCTATTGTGTTGATGATGGAGGACTTTTTCTGAAATCGTCGTTATTCTGATTCACCTTGCTGGTTTTGTTTCATTTTTTTTTTATTTCTTGTTGGGTAGAGATGGTTAGGTAGGGCCAATGAATTATCAACAAAATCAACTTGTAGCAAATGAATAAATAAATGGCTGTTAACAAGCCCCTACTTTTACTTCATCTTTTGACTTGTTTTGTTCTGGAGTTCCAAATACTTCAAATTTAAGTCACAAGAAAATATAACTGTGGGTTTTGTTTAATAATTTTATTAATGCATTATATTGCAGTTGGAACGGCAGTGGCGGTTGTTGGGATCGGTGCTTACAGGATATATGCTGCAAGGAAGAGTGCATCTGGTTAA
Protein sequence

>MS.gene44096.t1

MARGVPNTVNPHARTGVRIVVAGDQGTGKSSLISTASTENFRPNVAPVLPPTTLAVDLYPDRVPITIIDTSSRVADSDRVAEELQRADTVVLTYACDRPETLENLSTFWLPHLRNLEVNVPVIVVGCKLDLRDENQQVSLEQVMSPIMQQFREIETCIECSASRLIQVPEVFYYAQKAVLHPTAPLFDQETQTLKPRCVRALKRIFILCDSDGDGALSDAELNDFQVRCFNAPLQPAEIVGVKKVVQDKLSEGVNERGLTLTGFLFLHALFIEKGRLETTWTVLRKFGYNDEIKLADDAIPTLKRTPDQSVELTHEAIDFLKTTFESFDADLDGMLRPRELEELFSTAPESPWIGNLYEDAVERNAFGGLSLDAFLSEWALMTLLNPAFSVENLIYIGFPGEPLSAVRVTRKRRVDRKKQNSERNVLQCFVFGPRKSGKSAILNSFIGRPYSEAYNPTNEDRYAVNVVDISRENRKYLVLKEIPEGEVASLVADKESLASCDIAVFVHDRSDESSWRVSYDLLVQIAGHGENTGYEVPCLIVAAKDDLDPFALAIQESTRVSQDMGVEAPIPISVKLGDFNSLFRRIVTAAEHPHLSIPETEAGKTRKQINKILSRSLLCVSVGTAVAVVGIGAYRIYAARKSASG