Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036516.t1 | XP_003609623.2 | 94 | 449 | 16 | 2 | 1 | 438 | 1 | 449 | 8.70E-134 | 487.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036516.t1 | Q9SQU4 | 58.6 | 435 | 131 | 8 | 3 | 418 | 2 | 406 | 1.0e-50 | 202.6 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036516.t1 | G7JKA0 | 94.0 | 449 | 16 | 2 | 1 | 438 | 1 | 449 | 6.3e-134 | 487.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene036516.t1 | TF | C3H |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene036516 | MS.gene20707 | PPI |
MS.gene036516 | MS.gene07188 | PPI |
MS.gene036516 | MS.gene03029 | PPI |
MS.gene005625 | MS.gene036516 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036516.t1 | MTR_4g119280 | 96.477 | 511 | 7 | 2 | 1 | 500 | 1 | 511 | 0.0 | 967 |
MS.gene036516.t1 | MTR_4g119280 | 95.515 | 379 | 6 | 2 | 1 | 368 | 1 | 379 | 0.0 | 722 |
MS.gene036516.t1 | MTR_4g119280 | 38.849 | 139 | 75 | 3 | 311 | 439 | 80 | 218 | 1.28e-17 | 85.1 |
MS.gene036516.t1 | MTR_2g019740 | 67.137 | 496 | 126 | 6 | 18 | 500 | 11 | 482 | 0.0 | 558 |
MS.gene036516.t1 | MTR_2g019740 | 34.810 | 158 | 69 | 3 | 270 | 393 | 10 | 167 | 1.21e-16 | 82.8 |
MS.gene036516.t1 | MTR_1g088875 | 52.785 | 377 | 127 | 10 | 5 | 367 | 4 | 343 | 2.77e-112 | 336 |
MS.gene036516.t1 | MTR_1g088875 | 49.333 | 75 | 36 | 1 | 320 | 392 | 92 | 166 | 7.77e-17 | 82.4 |
MS.gene036516.t1 | MTR_1g088875 | 52.785 | 377 | 127 | 10 | 5 | 367 | 4 | 343 | 4.49e-112 | 335 |
MS.gene036516.t1 | MTR_1g088875 | 49.333 | 75 | 36 | 1 | 320 | 392 | 92 | 166 | 7.18e-17 | 82.4 |
MS.gene036516.t1 | MTR_1g088875 | 52.785 | 377 | 127 | 10 | 5 | 367 | 4 | 343 | 4.65e-112 | 335 |
MS.gene036516.t1 | MTR_1g088875 | 49.333 | 75 | 36 | 1 | 320 | 392 | 92 | 166 | 7.40e-17 | 82.4 |
MS.gene036516.t1 | MTR_7g079840 | 45.122 | 410 | 174 | 13 | 42 | 441 | 17 | 385 | 3.98e-103 | 315 |
MS.gene036516.t1 | MTR_7g079840 | 45.122 | 410 | 174 | 13 | 42 | 441 | 27 | 395 | 5.43e-103 | 315 |
MS.gene036516.t1 | MTR_5g085200 | 38.674 | 362 | 159 | 11 | 42 | 397 | 44 | 348 | 2.50e-72 | 236 |
MS.gene036516.t1 | MTR_5g085200 | 48.780 | 82 | 42 | 0 | 39 | 120 | 83 | 164 | 1.74e-19 | 91.3 |
MS.gene036516.t1 | MTR_5g085200 | 43.182 | 88 | 45 | 2 | 33 | 116 | 257 | 343 | 3.32e-15 | 78.2 |
MS.gene036516.t1 | MTR_3g075190 | 36.585 | 369 | 166 | 11 | 37 | 394 | 166 | 477 | 2.61e-64 | 217 |
MS.gene036516.t1 | MTR_3g075190 | 40.964 | 83 | 42 | 3 | 320 | 397 | 172 | 252 | 2.93e-11 | 66.2 |
MS.gene036516.t1 | MTR_4g104260 | 37.500 | 376 | 153 | 14 | 38 | 396 | 227 | 537 | 5.43e-63 | 215 |
MS.gene036516.t1 | MTR_8g446930 | 32.440 | 373 | 194 | 11 | 42 | 392 | 138 | 474 | 9.01e-46 | 167 |
MS.gene036516.t1 | MTR_8g446930 | 33.898 | 177 | 79 | 4 | 21 | 163 | 167 | 339 | 1.81e-26 | 112 |
MS.gene036516.t1 | MTR_8g446930 | 35.135 | 185 | 73 | 4 | 35 | 173 | 302 | 485 | 1.65e-25 | 110 |
MS.gene036516.t1 | MTR_8g446930 | 42.683 | 82 | 39 | 3 | 320 | 393 | 139 | 220 | 2.06e-12 | 69.7 |
MS.gene036516.t1 | MTR_8g446930 | 32.500 | 320 | 165 | 9 | 88 | 392 | 41 | 324 | 2.05e-36 | 138 |
MS.gene036516.t1 | MTR_8g446930 | 36.538 | 156 | 63 | 3 | 40 | 163 | 38 | 189 | 2.80e-27 | 113 |
MS.gene036516.t1 | MTR_8g446930 | 35.135 | 185 | 73 | 4 | 35 | 173 | 152 | 335 | 3.46e-26 | 110 |
MS.gene036516.t1 | MTR_8g446930 | 46.053 | 76 | 38 | 1 | 317 | 392 | 38 | 110 | 1.80e-15 | 78.2 |
MS.gene036516.t1 | MTR_1g088880 | 57.303 | 89 | 35 | 2 | 396 | 484 | 1 | 86 | 2.67e-15 | 72.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene036516.t1 | AT5G18550 | 51.969 | 508 | 183 | 15 | 3 | 493 | 2 | 465 | 6.51e-146 | 426 |
MS.gene036516.t1 | AT5G18550 | 53.669 | 477 | 166 | 14 | 3 | 462 | 2 | 440 | 1.72e-144 | 422 |
MS.gene036516.t1 | AT2G47850 | 51.535 | 456 | 170 | 9 | 20 | 464 | 16 | 431 | 4.87e-144 | 422 |
MS.gene036516.t1 | AT2G47850 | 51.535 | 456 | 170 | 9 | 20 | 464 | 16 | 431 | 4.87e-144 | 422 |
MS.gene036516.t1 | AT5G18550 | 53.680 | 462 | 164 | 13 | 40 | 493 | 14 | 433 | 2.11e-141 | 414 |
MS.gene036516.t1 | AT5G18550 | 50.296 | 507 | 180 | 15 | 3 | 493 | 2 | 452 | 1.25e-137 | 405 |
MS.gene036516.t1 | AT3G06410 | 56.481 | 432 | 139 | 13 | 3 | 415 | 2 | 403 | 2.03e-131 | 389 |
MS.gene036516.t1 | AT2G47850 | 46.711 | 456 | 166 | 10 | 20 | 464 | 16 | 405 | 3.18e-119 | 357 |
MS.gene036516.t1 | AT3G02830 | 44.828 | 377 | 149 | 8 | 41 | 408 | 36 | 362 | 1.74e-97 | 300 |
MS.gene036516.t1 | AT3G02830 | 42.857 | 84 | 47 | 1 | 310 | 392 | 28 | 111 | 7.57e-14 | 73.6 |
MS.gene036516.t1 | AT3G02830 | 44.828 | 377 | 149 | 8 | 41 | 408 | 16 | 342 | 2.05e-97 | 299 |
MS.gene036516.t1 | AT3G02830 | 42.857 | 84 | 47 | 1 | 310 | 392 | 8 | 91 | 7.86e-14 | 73.6 |
MS.gene036516.t1 | AT2G47850 | 50.578 | 346 | 124 | 8 | 126 | 464 | 4 | 309 | 5.60e-94 | 289 |
MS.gene036516.t1 | AT2G47850 | 51.765 | 85 | 41 | 0 | 79 | 163 | 156 | 240 | 4.71e-23 | 100 |
MS.gene036516.t1 | AT2G47850 | 39.773 | 88 | 44 | 2 | 34 | 116 | 156 | 239 | 8.10e-16 | 79.3 |
MS.gene036516.t1 | AT1G04990 | 37.360 | 356 | 152 | 11 | 42 | 392 | 44 | 333 | 2.26e-63 | 212 |
MS.gene036516.t1 | AT1G04990 | 40.833 | 120 | 69 | 2 | 305 | 423 | 73 | 191 | 4.50e-21 | 95.9 |
MS.gene036516.t1 | AT1G04990 | 42.683 | 82 | 47 | 0 | 40 | 121 | 85 | 166 | 2.89e-17 | 84.3 |
MS.gene036516.t1 | AT1G04990 | 38.182 | 110 | 58 | 3 | 89 | 195 | 260 | 362 | 2.14e-12 | 69.3 |
MS.gene036516.t1 | AT1G04990 | 37.360 | 356 | 152 | 11 | 42 | 392 | 44 | 333 | 2.26e-63 | 212 |
MS.gene036516.t1 | AT1G04990 | 40.833 | 120 | 69 | 2 | 305 | 423 | 73 | 191 | 4.50e-21 | 95.9 |
MS.gene036516.t1 | AT1G04990 | 42.683 | 82 | 47 | 0 | 40 | 121 | 85 | 166 | 2.89e-17 | 84.3 |
MS.gene036516.t1 | AT1G04990 | 38.182 | 110 | 58 | 3 | 89 | 195 | 260 | 362 | 2.14e-12 | 69.3 |
MS.gene036516.t1 | AT1G04990 | 37.360 | 356 | 152 | 11 | 42 | 392 | 44 | 333 | 2.26e-63 | 212 |
MS.gene036516.t1 | AT1G04990 | 40.833 | 120 | 69 | 2 | 305 | 423 | 73 | 191 | 4.50e-21 | 95.9 |
MS.gene036516.t1 | AT1G04990 | 42.683 | 82 | 47 | 0 | 40 | 121 | 85 | 166 | 2.89e-17 | 84.3 |
MS.gene036516.t1 | AT1G04990 | 38.182 | 110 | 58 | 3 | 89 | 195 | 260 | 362 | 2.14e-12 | 69.3 |
MS.gene036516.t1 | AT2G32930 | 32.432 | 481 | 228 | 17 | 42 | 494 | 14 | 425 | 1.21e-62 | 211 |
MS.gene036516.t1 | AT2G32930 | 39.286 | 84 | 51 | 0 | 34 | 117 | 50 | 133 | 9.24e-16 | 79.7 |
MS.gene036516.t1 | AT2G32930 | 32.432 | 481 | 228 | 17 | 42 | 494 | 41 | 452 | 1.68e-62 | 211 |
MS.gene036516.t1 | AT2G32930 | 39.759 | 83 | 50 | 0 | 34 | 116 | 77 | 159 | 1.09e-15 | 79.7 |
MS.gene036516.t1 | AT5G63260 | 38.360 | 378 | 158 | 14 | 42 | 403 | 98 | 416 | 1.84e-60 | 205 |
MS.gene036516.t1 | AT5G63260 | 38.961 | 77 | 46 | 1 | 40 | 115 | 329 | 405 | 1.03e-13 | 73.6 |
MS.gene036516.t1 | AT1G04990 | 36.338 | 355 | 137 | 12 | 42 | 392 | 44 | 313 | 4.08e-59 | 200 |
MS.gene036516.t1 | AT1G04990 | 40.833 | 120 | 69 | 2 | 305 | 423 | 73 | 191 | 3.72e-21 | 95.9 |
MS.gene036516.t1 | AT1G04990 | 42.683 | 82 | 47 | 0 | 40 | 121 | 85 | 166 | 3.45e-17 | 84.0 |
MS.gene036516.t1 | AT2G32930 | 32.225 | 481 | 225 | 18 | 42 | 494 | 41 | 448 | 1.53e-58 | 200 |
MS.gene036516.t1 | AT5G16540 | 36.607 | 336 | 160 | 9 | 23 | 348 | 23 | 315 | 2.59e-58 | 197 |
MS.gene036516.t1 | AT5G16540 | 53.261 | 92 | 41 | 1 | 315 | 404 | 236 | 327 | 4.46e-26 | 110 |
MS.gene036516.t1 | AT5G16540 | 51.948 | 77 | 37 | 0 | 87 | 163 | 240 | 316 | 3.85e-19 | 89.7 |
MS.gene036516.t1 | AT5G16540 | 46.667 | 75 | 38 | 1 | 320 | 392 | 85 | 159 | 8.62e-17 | 82.4 |
MS.gene036516.t1 | AT5G16540 | 39.394 | 99 | 55 | 2 | 318 | 415 | 38 | 132 | 1.11e-12 | 70.1 |
MS.gene036516.t1 | AT5G16540 | 36.607 | 336 | 160 | 9 | 23 | 348 | 2 | 294 | 4.40e-58 | 196 |
MS.gene036516.t1 | AT5G16540 | 53.261 | 92 | 41 | 1 | 315 | 404 | 215 | 306 | 4.24e-26 | 109 |
MS.gene036516.t1 | AT5G16540 | 51.948 | 77 | 37 | 0 | 87 | 163 | 219 | 295 | 4.49e-19 | 89.0 |
MS.gene036516.t1 | AT5G16540 | 46.667 | 75 | 38 | 1 | 320 | 392 | 64 | 138 | 9.61e-17 | 82.0 |
MS.gene036516.t1 | AT5G16540 | 39.394 | 99 | 55 | 2 | 318 | 415 | 17 | 111 | 1.12e-12 | 69.7 |
MS.gene036516.t1 | AT5G63260 | 36.802 | 394 | 158 | 15 | 42 | 403 | 98 | 432 | 4.21e-57 | 196 |
MS.gene036516.t1 | AT5G63260 | 38.961 | 77 | 46 | 1 | 40 | 115 | 345 | 421 | 1.18e-13 | 73.6 |
MS.gene036516.t1 | AT5G16540 | 36.070 | 341 | 148 | 11 | 23 | 348 | 23 | 308 | 7.97e-56 | 191 |
MS.gene036516.t1 | AT5G16540 | 47.778 | 90 | 42 | 1 | 315 | 404 | 236 | 320 | 2.07e-20 | 93.2 |
MS.gene036516.t1 | AT5G16540 | 46.667 | 75 | 38 | 1 | 320 | 392 | 85 | 159 | 8.28e-17 | 82.4 |
MS.gene036516.t1 | AT5G16540 | 39.394 | 99 | 55 | 2 | 318 | 415 | 38 | 132 | 9.92e-13 | 70.1 |
MS.gene036516.t1 | AT5G16540 | 48.205 | 195 | 83 | 5 | 23 | 214 | 2 | 181 | 1.78e-55 | 187 |
MS.gene036516.t1 | AT5G16540 | 33.553 | 152 | 92 | 2 | 320 | 469 | 64 | 208 | 4.45e-17 | 81.6 |
MS.gene036516.t1 | AT5G16540 | 60.000 | 55 | 20 | 1 | 315 | 367 | 215 | 269 | 2.59e-14 | 73.6 |
MS.gene036516.t1 | AT5G16540 | 39.394 | 99 | 55 | 2 | 318 | 415 | 17 | 111 | 6.15e-13 | 69.7 |
MS.gene036516.t1 | AT1G04990 | 34.219 | 301 | 129 | 10 | 97 | 392 | 16 | 252 | 3.24e-41 | 150 |
MS.gene036516.t1 | AT1G04990 | 43.000 | 100 | 55 | 2 | 325 | 423 | 12 | 110 | 1.55e-17 | 84.0 |
MS.gene036516.t1 | AT1G04990 | 43.478 | 69 | 39 | 0 | 53 | 121 | 17 | 85 | 2.04e-14 | 74.7 |
MS.gene036516.t1 | AT1G04990 | 38.182 | 110 | 58 | 3 | 89 | 195 | 179 | 281 | 1.18e-12 | 69.3 |
MS.gene036516.t1 | AT3G48440 | 34.940 | 332 | 168 | 11 | 87 | 391 | 107 | 417 | 8.80e-39 | 147 |
MS.gene036516.t1 | AT3G48440 | 32.749 | 342 | 188 | 13 | 31 | 347 | 93 | 417 | 3.98e-36 | 139 |
MS.gene036516.t1 | AT3G48440 | 37.500 | 80 | 49 | 1 | 40 | 118 | 341 | 420 | 3.07e-13 | 72.0 |
MS.gene036516.t1 | AT3G48440 | 29.508 | 183 | 68 | 5 | 313 | 440 | 101 | 277 | 4.54e-13 | 71.6 |
MS.gene036516.t1 | AT1G04990 | 33.000 | 300 | 114 | 11 | 97 | 392 | 16 | 232 | 4.18e-37 | 139 |
MS.gene036516.t1 | AT1G04990 | 43.000 | 100 | 55 | 2 | 325 | 423 | 12 | 110 | 1.17e-17 | 84.0 |
MS.gene036516.t1 | AT1G04990 | 43.478 | 69 | 39 | 0 | 53 | 121 | 17 | 85 | 2.42e-14 | 74.3 |
MS.gene036516.t1 | AT3G12680 | 41.060 | 151 | 61 | 3 | 39 | 163 | 219 | 367 | 1.39e-32 | 130 |
MS.gene036516.t1 | AT3G12680 | 40.331 | 181 | 62 | 6 | 34 | 171 | 329 | 506 | 2.42e-28 | 118 |
MS.gene036516.t1 | AT3G12680 | 42.969 | 128 | 64 | 3 | 42 | 163 | 171 | 295 | 2.92e-27 | 115 |
MS.gene036516.t1 | AT3G12680 | 32.500 | 200 | 74 | 5 | 36 | 174 | 259 | 458 | 3.94e-23 | 102 |
MS.gene036516.t1 | AT3G12680 | 48.810 | 84 | 34 | 1 | 318 | 392 | 416 | 499 | 3.56e-19 | 90.9 |
MS.gene036516.t1 | AT3G12680 | 31.250 | 144 | 70 | 3 | 312 | 427 | 258 | 400 | 7.69e-16 | 80.5 |
MS.gene036516.t1 | AT3G12680 | 38.614 | 101 | 54 | 3 | 320 | 412 | 172 | 272 | 1.12e-13 | 73.9 |
MS.gene036516.t1 | AT3G12680 | 46.575 | 73 | 38 | 1 | 320 | 392 | 223 | 294 | 2.18e-13 | 72.8 |
MS.gene036516.t1 | AT1G48195 | 46.250 | 80 | 41 | 1 | 316 | 393 | 3 | 82 | 4.76e-19 | 82.0 |
MS.gene036516.t1 | AT1G48195 | 46.053 | 76 | 41 | 0 | 86 | 161 | 5 | 80 | 1.01e-16 | 75.5 |
MS.gene036516.t1 | AT1G48195 | 37.662 | 77 | 47 | 1 | 40 | 115 | 4 | 80 | 1.98e-11 | 60.5 |
Find 194 sgRNAs with CRISPR-Local
Find 318 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCCTGCTGATCAGGCCTTTC+AGG | 0.127139 | 8.1:+8815749 | None:intergenic |
TCATTTGTCCAGGGCCCTTA+TGG | 0.161593 | 8.1:-8816136 | MS.gene036516:CDS |
AAAACAGGGGACTGTAAATT+TGG | 0.217295 | 8.1:-8815710 | MS.gene036516:CDS |
GTTGGTTCGACGCAGCTTTA+TGG | 0.252629 | 8.1:-8815935 | MS.gene036516:CDS |
TTGTGATTGGTTTAGGTTAT+TGG | 0.258647 | 8.1:-8817012 | MS.gene036516:intron |
TAAGGGCTCCAGCCTGAAAA+AGG | 0.262944 | 8.1:+8816085 | None:intergenic |
AGGACGGGATCGTGCAAATT+TGG | 0.273979 | 8.1:-8816605 | MS.gene036516:CDS |
TTCAGGCTGGAGCCCTTATC+AGG | 0.307461 | 8.1:-8816080 | MS.gene036516:intron |
GGATGAAGCAGGCTCCTTGC+TGG | 0.312902 | 8.1:+8814310 | None:intergenic |
CATTTGTCCAGGGCCCTTAT+GGG | 0.325235 | 8.1:-8816135 | MS.gene036516:CDS |
ACGGGCTGTCCAACTCGTTC+TGG | 0.343305 | 8.1:+8816964 | None:intergenic |
GCTGGTCCTTATCAATCTTC+TGG | 0.343679 | 8.1:-8815818 | MS.gene036516:CDS |
GCTGGTCCTTACCAATCTTC+TGG | 0.357551 | 8.1:-8815848 | MS.gene036516:CDS |
GGCTGTACAGTTTGATAAAC+AGG | 0.361283 | 8.1:+8816223 | None:intergenic |
TCTAGGATGGTGATACTTGC+AGG | 0.363592 | 8.1:+8816577 | None:intergenic |
GCAGGGTATGGTGGATTGGT+TGG | 0.368471 | 8.1:-8817386 | MS.gene036516:intron |
TTGGTTCGACGCAGCTTTAT+GGG | 0.368819 | 8.1:-8815934 | MS.gene036516:CDS |
TGCTGACATTCCTGCTGATC+AGG | 0.370843 | 8.1:+8815740 | None:intergenic |
TCACCAACAACCGTCTATAC+TGG | 0.371079 | 8.1:-8815896 | MS.gene036516:CDS |
GACATTACCATTGGCCCATA+AGG | 0.373452 | 8.1:+8816121 | None:intergenic |
CTGATTGTATCTATTATTTG+AGG | 0.384105 | 8.1:-8817328 | MS.gene036516:CDS |
CTGGATCCTGATGCAAGTTC+AGG | 0.386934 | 8.1:+8814329 | None:intergenic |
ATTGGAGCTGCGAGGATTGC+CGG | 0.388091 | 8.1:-8816994 | MS.gene036516:CDS |
GCTCATTGATGATGACATTC+TGG | 0.391929 | 8.1:+8814289 | None:intergenic |
CAACCATCTTCTCAGAGTTC+CGG | 0.392756 | 8.1:-8814203 | MS.gene036516:CDS |
TGTCAGCATTACATGAAAAC+AGG | 0.398214 | 8.1:-8815725 | MS.gene036516:CDS |
AAAGTGAACCTTAGTCCTAT+TGG | 0.411454 | 8.1:-8815644 | MS.gene036516:CDS |
TGAATTAACCACCTGGCAAA+CGG | 0.411779 | 8.1:+8816945 | None:intergenic |
GGTGCTACTTGTGGTGGCAC+TGG | 0.412279 | 8.1:+8814166 | None:intergenic |
GGTCCCTCAACCGGTCCTTC+AGG | 0.414102 | 8.1:-8815797 | MS.gene036516:CDS |
CAATCTTCTGGTCCCTCAGC+TGG | 0.414974 | 8.1:-8815836 | MS.gene036516:CDS |
CAATCCTCTGGTCCCTCAGC+TGG | 0.414974 | 8.1:-8815866 | MS.gene036516:CDS |
TCTACATGGCTCATTTGTCC+AGG | 0.415319 | 8.1:-8816146 | MS.gene036516:CDS |
GCACCGACGGAAGTCCATTC+CGG | 0.418324 | 8.1:+8817520 | None:intergenic |
AAAACGGGACAATGCAAGTT+TGG | 0.420191 | 8.1:-8816346 | MS.gene036516:CDS |
CCCACAGGATAGGGTGCAAC+TGG | 0.421391 | 8.1:+8814401 | None:intergenic |
AGAGGTGAAACTTGGGGAAC+TGG | 0.421536 | 8.1:+8816265 | None:intergenic |
ACCTGAAAGGCCTGATCAGC+AGG | 0.421548 | 8.1:-8815750 | MS.gene036516:CDS |
GCATTGGCAGAGGTGAAACT+TGG | 0.425784 | 8.1:+8816257 | None:intergenic |
AGTCCGGGACATACCTGATA+AGG | 0.428673 | 8.1:+8816067 | None:intergenic |
ATAGGACTAAGGTTCACTTT+TGG | 0.429387 | 8.1:+8815647 | None:intergenic |
GACTTTGTCAACGGTTGTAC+CGG | 0.430550 | 8.1:-8814243 | MS.gene036516:CDS |
TATCCTGTGGGTTCCGCCAT+TGG | 0.430848 | 8.1:-8814389 | MS.gene036516:CDS |
CAATCTTCTGGTCCCTCAAC+CGG | 0.435809 | 8.1:-8815806 | MS.gene036516:CDS |
AGTTGGACAGCCCGTTTGCC+AGG | 0.438645 | 8.1:-8816956 | MS.gene036516:intron |
GTAGTTCCTGCCGCCTGTCT+AGG | 0.442023 | 8.1:+8816560 | None:intergenic |
AAGCAGATGGACTGTAACTC+AGG | 0.442386 | 8.1:+8814441 | None:intergenic |
GGGCGCAAAGGAAGGCCAAT+AGG | 0.442531 | 8.1:+8815629 | None:intergenic |
GAATTAACCACCTGGCAAAC+GGG | 0.443512 | 8.1:+8816946 | None:intergenic |
TGTATCTATTATTTGAGGAC+AGG | 0.449948 | 8.1:-8817323 | MS.gene036516:CDS |
GTGTTCCTATTATGTGAAAA+CGG | 0.451501 | 8.1:-8816362 | MS.gene036516:CDS |
TGGGCATCTGATTGAGAAAC+CGG | 0.455710 | 8.1:+8814224 | None:intergenic |
GGGTATGGTGGATTGGTTGG+TGG | 0.457920 | 8.1:-8817383 | MS.gene036516:CDS |
CCCGTGTCGCTAAATTGTTA+TGG | 0.459022 | 8.1:-8816533 | MS.gene036516:CDS |
GGAAGTACAGGGCTTGCTGC+TGG | 0.460193 | 8.1:+8815977 | None:intergenic |
GCGGTTATGGTTCTAGGTGT+CGG | 0.465761 | 8.1:-8817295 | MS.gene036516:CDS |
TGTTGCAGGGTATGGTGGAT+TGG | 0.467100 | 8.1:-8817390 | MS.gene036516:intron |
TATGGTGGATTGGTTGGTGG+TGG | 0.468504 | 8.1:-8817380 | MS.gene036516:CDS |
CACCCGCAGGCTGTGGATGA+TGG | 0.471640 | 8.1:+8816308 | None:intergenic |
ATTTGGCCACCCGCAGGCTG+TGG | 0.472332 | 8.1:+8816301 | None:intergenic |
CAGCTGAGGGACCAGAAGAT+TGG | 0.481828 | 8.1:+8815837 | None:intergenic |
ACACTCAACGGAGTACTAGA+AGG | 0.482108 | 8.1:+8815956 | None:intergenic |
GGTCCTTCACAACAACAATA+TGG | 0.484846 | 8.1:-8816193 | MS.gene036516:CDS |
AACTCGGATGATGAGGATGA+TGG | 0.484942 | 8.1:+8814356 | None:intergenic |
TATTGGCCTTCCTTTGCGCC+CGG | 0.486134 | 8.1:-8815627 | MS.gene036516:intron |
TGTTCCTATTATGTGAAAAC+GGG | 0.487218 | 8.1:-8816361 | MS.gene036516:CDS |
TTGAGGCCTGAACTTGCATC+AGG | 0.491757 | 8.1:-8814335 | MS.gene036516:CDS |
ACATTACCATTGGCCCATAA+GGG | 0.494713 | 8.1:+8816122 | None:intergenic |
GTGAATGTTGCAGGGTATGG+TGG | 0.494891 | 8.1:-8817395 | MS.gene036516:intron |
ACTGGGAGTTGCTAAAGAAC+CGG | 0.495795 | 8.1:+8814184 | None:intergenic |
ACAGGTGAAGGTACCGGCAT+TGG | 0.496432 | 8.1:+8816241 | None:intergenic |
AGCTGGCTTGACTTTGTCAA+CGG | 0.496678 | 8.1:-8814252 | MS.gene036516:CDS |
TAGATACAATCAGCTTCATC+AGG | 0.499288 | 8.1:+8817338 | None:intergenic |
CTACCTGAAGGACCGGTTGA+GGG | 0.505161 | 8.1:+8815794 | None:intergenic |
CTGGTGATGGTGCTATCATT+TGG | 0.515476 | 8.1:+8816284 | None:intergenic |
GGAGTACTAGAAGGAAGTAC+AGG | 0.516255 | 8.1:+8815965 | None:intergenic |
ATATCATCATCCGCCGGACA+TGG | 0.516601 | 8.1:-8815675 | MS.gene036516:CDS |
GCCAGTTGCACCCTATCCTG+TGG | 0.516851 | 8.1:-8814402 | MS.gene036516:CDS |
GAACCGGAACTCTGAGAAGA+TGG | 0.517115 | 8.1:+8814200 | None:intergenic |
TCTAGTACTCCGTTGAGTGT+TGG | 0.517479 | 8.1:-8815953 | MS.gene036516:CDS |
CGGAACTCTGAGAAGATGGT+TGG | 0.517807 | 8.1:+8814204 | None:intergenic |
TTCCATCATCCACAGCCTGC+GGG | 0.519032 | 8.1:-8816310 | MS.gene036516:CDS |
GCTATCATTTGGCCACCCGC+AGG | 0.521595 | 8.1:+8816295 | None:intergenic |
ACTCTGATCCGTCGCCGGAA+TGG | 0.523998 | 8.1:-8817534 | MS.gene036516:CDS |
CAGCTGAGGGACCAGAGGAT+TGG | 0.524806 | 8.1:+8815867 | None:intergenic |
CCATTGGCCCATAAGGGCCC+TGG | 0.526364 | 8.1:+8816128 | None:intergenic |
GAAGGTACCGGCATTGGCAG+AGG | 0.526800 | 8.1:+8816247 | None:intergenic |
AGCACATCGACTTCTTCAGC+TGG | 0.527262 | 8.1:-8814269 | MS.gene036516:CDS |
CTACATGGCTCATTTGTCCA+GGG | 0.527744 | 8.1:-8816145 | MS.gene036516:CDS |
CTGCAGTACTATGCGAGGAC+GGG | 0.528562 | 8.1:-8816620 | MS.gene036516:intron |
GTGCTACTTGTGGTGGCACT+GGG | 0.532061 | 8.1:+8814167 | None:intergenic |
ATGGCGGAACCCACAGGATA+GGG | 0.532120 | 8.1:+8814392 | None:intergenic |
GGTCCAGTATAGACGGTTGT+TGG | 0.532400 | 8.1:+8815893 | None:intergenic |
ACTCGGATGATGAGGATGAT+GGG | 0.532572 | 8.1:+8814357 | None:intergenic |
CATTGGCAGAGGTGAAACTT+GGG | 0.537765 | 8.1:+8816258 | None:intergenic |
CAAGTATCACCATCCTAGAC+AGG | 0.538523 | 8.1:-8816573 | MS.gene036516:CDS |
GTCCGGGACATACCTGATAA+GGG | 0.540447 | 8.1:+8816068 | None:intergenic |
AATGGCGGAACCCACAGGAT+AGG | 0.542826 | 8.1:+8814391 | None:intergenic |
TGCAACTGGCATATCAGAAA+GGG | 0.543825 | 8.1:+8814415 | None:intergenic |
GGAACTCTGAGAAGATGGTT+GGG | 0.544097 | 8.1:+8814205 | None:intergenic |
GCGAGGCCACCTCTTCTACA+TGG | 0.546491 | 8.1:-8816160 | MS.gene036516:CDS |
ACTGGACCTTACCAATCCTC+TGG | 0.549245 | 8.1:-8815878 | MS.gene036516:CDS |
GTACCAATGGCGGAACCCAC+AGG | 0.549531 | 8.1:+8814386 | None:intergenic |
GTTGCACTCTGATCCGTCGC+CGG | 0.554636 | 8.1:-8817539 | MS.gene036516:CDS |
CATTCACATTGCTTAGCTTG+AGG | 0.554771 | 8.1:+8814133 | None:intergenic |
CCGCGCCACGGTCACGTGGA+TGG | 0.555477 | 8.1:+8817267 | None:intergenic |
TGCAAGTTTGATCATCCTAC+GGG | 0.556067 | 8.1:-8814467 | MS.gene036516:CDS |
ATATTGTTGTTGTGAAGGAC+CGG | 0.556322 | 8.1:+8816195 | None:intergenic |
CCAGTTGCACCCTATCCTGT+GGG | 0.556861 | 8.1:-8814401 | MS.gene036516:CDS |
AACTCGTTCTGGATATTCAC+CGG | 0.557101 | 8.1:+8816975 | None:intergenic |
GTGCAACTGGCATATCAGAA+AGG | 0.557979 | 8.1:+8814414 | None:intergenic |
ACTACCTGAAGGACCGGTTG+AGG | 0.558770 | 8.1:+8815793 | None:intergenic |
AAGGAAGGCCAATAGGACTA+AGG | 0.560421 | 8.1:+8815636 | None:intergenic |
GAAACTTGGGGAACTGGTGA+TGG | 0.560745 | 8.1:+8816271 | None:intergenic |
ACGGAAGTCCATTCCGGCGA+CGG | 0.563671 | 8.1:+8817526 | None:intergenic |
GTATAGACGGTTGTTGGTGA+AGG | 0.565761 | 8.1:+8815899 | None:intergenic |
TCATTACCGGGCGCAAAGGA+AGG | 0.566968 | 8.1:+8815621 | None:intergenic |
GAGGGACCAGAAGATTGATA+AGG | 0.567065 | 8.1:+8815812 | None:intergenic |
AGTTTCACCTCTGCCAATGC+CGG | 0.567846 | 8.1:-8816254 | MS.gene036516:CDS |
TGATAAACAGGTGAAGGTAC+CGG | 0.568456 | 8.1:+8816235 | None:intergenic |
TTCCTGCCGCCTGTCTAGGA+TGG | 0.568534 | 8.1:+8816564 | None:intergenic |
ACTTCCGTCGGTGCTGATGA+AGG | 0.569648 | 8.1:-8817511 | MS.gene036516:intron |
GCTGCAGTACTATGCGAGGA+CGG | 0.572531 | 8.1:-8816621 | MS.gene036516:intron |
GTGCAAGTTTGATCATCCTA+CGG | 0.575614 | 8.1:-8814468 | MS.gene036516:CDS |
ACACCATATTGTTGTTGTGA+AGG | 0.575855 | 8.1:+8816190 | None:intergenic |
CAAACTGTACAGCCTCCGTC+CGG | 0.577193 | 8.1:-8816214 | MS.gene036516:CDS |
CGCTGGGTATAATGAGTGCA+AGG | 0.577555 | 8.1:+8814515 | None:intergenic |
CCAGGGCCCTTATGGGCCAA+TGG | 0.578875 | 8.1:-8816128 | MS.gene036516:CDS |
GAGACGACCCATCGTTAGCT+CGG | 0.581397 | 8.1:+8817563 | None:intergenic |
CACCATCCTAGACAGGCGGC+AGG | 0.582959 | 8.1:-8816566 | MS.gene036516:CDS |
ATAATCATTACCGGGCGCAA+AGG | 0.584792 | 8.1:+8815617 | None:intergenic |
TATCATCATCCGCCGGACAT+GGG | 0.589789 | 8.1:-8815674 | MS.gene036516:CDS |
CTCGGATGATGAGGATGATG+GGG | 0.590885 | 8.1:+8814358 | None:intergenic |
CTGACTACTACCTGAAGGAC+CGG | 0.592024 | 8.1:+8815787 | None:intergenic |
AGGCCTCAACTCGGATGATG+AGG | 0.592496 | 8.1:+8814349 | None:intergenic |
TTTACCGCGCCACGGTCACG+TGG | 0.593039 | 8.1:+8817263 | None:intergenic |
TGCAAGTTCAGGCCTCAACT+CGG | 0.595724 | 8.1:+8814340 | None:intergenic |
TCCTTCAGGTAGTAGTCAGA+AGG | 0.595822 | 8.1:-8815783 | MS.gene036516:CDS |
CCATAACAATTTAGCGACAC+GGG | 0.599754 | 8.1:+8816533 | None:intergenic |
AGATTGATAAGGACCAGCTG+AGG | 0.601283 | 8.1:+8815823 | None:intergenic |
TCAGAAAGGGAAGAAGCAGA+TGG | 0.603283 | 8.1:+8814428 | None:intergenic |
CATCCTCATCATCCGAGTTG+AGG | 0.603884 | 8.1:-8814352 | MS.gene036516:CDS |
GATGACATTCTGGATGAAGC+AGG | 0.604175 | 8.1:+8814299 | None:intergenic |
AGATTGGTAAGGACCAGCTG+AGG | 0.604660 | 8.1:+8815853 | None:intergenic |
TGATGGGGCAAGAGTACCAA+TGG | 0.604718 | 8.1:+8814373 | None:intergenic |
ATTCCATCATCCACAGCCTG+CGG | 0.605023 | 8.1:-8816311 | MS.gene036516:CDS |
TTTGGTGCACCCATGTCCGG+CGG | 0.607060 | 8.1:+8815665 | None:intergenic |
TCGCCGGAATGGACTTCCGT+CGG | 0.607142 | 8.1:-8817523 | MS.gene036516:CDS |
AAAGTACAAACCACTCGCAA+CGG | 0.608625 | 8.1:+8816506 | None:intergenic |
AAACTTACAAAATCCACGCT+GGG | 0.608759 | 8.1:+8814499 | None:intergenic |
TCAGCTTCATCAGGTCGTTG+TGG | 0.608955 | 8.1:+8817347 | None:intergenic |
GAGGGACCAGAGGATTGGTA+AGG | 0.609630 | 8.1:+8815872 | None:intergenic |
TGCGTCGAACCAACACTCAA+CGG | 0.610522 | 8.1:+8815944 | None:intergenic |
GGTGAATATCCAGAACGAGT+TGG | 0.612989 | 8.1:-8816973 | MS.gene036516:CDS |
AGGTACGGCCGAGCTAACGA+TGG | 0.613122 | 8.1:-8817571 | MS.gene036516:CDS |
ACAAATGAGCCATGTAGAAG+AGG | 0.616318 | 8.1:+8816151 | None:intergenic |
TTGGTAAGGTCCAGTATAGA+CGG | 0.617115 | 8.1:+8815886 | None:intergenic |
GGTACGGCCGAGCTAACGAT+GGG | 0.619629 | 8.1:-8817570 | MS.gene036516:CDS |
GAGGGACCAGAAGATTGGTA+AGG | 0.620595 | 8.1:+8815842 | None:intergenic |
AGCAGATGGACTGTAACTCA+GGG | 0.621538 | 8.1:+8814442 | None:intergenic |
CATCATCCACAGCCTGCGGG+TGG | 0.623790 | 8.1:-8816307 | MS.gene036516:CDS |
TCCATAACAATTTAGCGACA+CGG | 0.624173 | 8.1:+8816532 | None:intergenic |
CAAACTTACAAAATCCACGC+TGG | 0.625616 | 8.1:+8814498 | None:intergenic |
AGTACCTTCATCAGCACCGA+CGG | 0.628033 | 8.1:+8817507 | None:intergenic |
CCATCCACGTGACCGTGGCG+CGG | 0.628156 | 8.1:-8817267 | MS.gene036516:intron |
AATGAGCCATGTAGAAGAGG+TGG | 0.628441 | 8.1:+8816154 | None:intergenic |
TTATGGATATCCGTTGCGAG+TGG | 0.629078 | 8.1:-8816516 | MS.gene036516:intron |
AGGAACACTCATTACCTGAA+AGG | 0.629964 | 8.1:-8815763 | MS.gene036516:CDS |
TCCTTCTGACTACTACCTGA+AGG | 0.631642 | 8.1:+8815782 | None:intergenic |
GATTGATAAGGACCAGCTGA+GGG | 0.633302 | 8.1:+8815824 | None:intergenic |
ACAGTTTGATAAACAGGTGA+AGG | 0.637901 | 8.1:+8816229 | None:intergenic |
GTGAGAGACGGTGCTACTTG+TGG | 0.638791 | 8.1:+8814157 | None:intergenic |
TTTAACCATCCACGTGACCG+TGG | 0.642316 | 8.1:-8817272 | MS.gene036516:CDS |
GTCAGCATTACATGAAAACA+GGG | 0.642817 | 8.1:-8815724 | MS.gene036516:CDS |
GATTGGTAAGGACCAGCTGA+GGG | 0.643343 | 8.1:+8815854 | None:intergenic |
TTAGCTTGAGGTGTGAGAGA+CGG | 0.646603 | 8.1:+8814145 | None:intergenic |
AGGACCAGCTGAGGGACCAG+AGG | 0.646769 | 8.1:+8815862 | None:intergenic |
TGCACTCATTATACCCAGCG+TGG | 0.650258 | 8.1:-8814512 | MS.gene036516:CDS |
TGTTGTTGTGAAGGACCGGA+CGG | 0.652804 | 8.1:+8816199 | None:intergenic |
ATGTAGATATCATCATCCGC+CGG | 0.657903 | 8.1:-8815681 | MS.gene036516:CDS |
AATATGGTGTACTTGTTGCG+AGG | 0.663439 | 8.1:-8816177 | MS.gene036516:CDS |
TCATGCTGCAGTACTATGCG+AGG | 0.670087 | 8.1:-8816625 | MS.gene036516:intron |
GAGTACTAGAAGGAAGTACA+GGG | 0.672699 | 8.1:+8815966 | None:intergenic |
CGTACAATGGAACAAAGGTA+CGG | 0.672974 | 8.1:-8817586 | None:intergenic |
ATTGGCAGAGGTGAAACTTG+GGG | 0.673579 | 8.1:+8816259 | None:intergenic |
ACTTGCATCAGGATCCAGCA+AGG | 0.675326 | 8.1:-8814324 | MS.gene036516:CDS |
TCGTCCGTACAATGGAACAA+AGG | 0.678724 | 8.1:-8817591 | None:intergenic |
CTGTAACTCAGGGATCCCGT+AGG | 0.679795 | 8.1:+8814452 | None:intergenic |
GTATCACCATCCTAGACAGG+CGG | 0.680328 | 8.1:-8816570 | MS.gene036516:CDS |
TTTAGGTTATTGGAGCTGCG+AGG | 0.685804 | 8.1:-8817002 | MS.gene036516:intron |
AGAGACGGTGCTACTTGTGG+TGG | 0.702854 | 8.1:+8814160 | None:intergenic |
TGTTGTGAAGGACCGGACGG+AGG | 0.705461 | 8.1:+8816202 | None:intergenic |
TGGGGCAAGAGTACCAATGG+CGG | 0.727761 | 8.1:+8814376 | None:intergenic |
TCAGCATTACATGAAAACAG+GGG | 0.793025 | 8.1:-8815723 | MS.gene036516:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | GTTTAATCAAATTAAAATTT+GGG | + | chr8.1:8816903-8816922 | None:intergenic | 10.0% |
!!! | TCACATTTTTTTTTATTTTT+GGG | + | chr8.1:8816606-8816625 | None:intergenic | 10.0% |
!!! | TTATAATGTTTTTTTACTAA+CGG | - | chr8.1:8814582-8814601 | MS.gene036516:intron | 10.0% |
!!! | TTATTTTTATGTCATATATT+TGG | - | chr8.1:8816456-8816475 | MS.gene036516:intron | 10.0% |
!!! | TTCACATTTTTTTTTATTTT+TGG | + | chr8.1:8816607-8816626 | None:intergenic | 10.0% |
!! | CGTTTAATCAAATTAAAATT+TGG | + | chr8.1:8816904-8816923 | None:intergenic | 15.0% |
!!! | ACATTTTTTTTTATTTTTGG+GGG | + | chr8.1:8816604-8816623 | None:intergenic | 15.0% |
!!! | CACATTTTTTTTTATTTTTG+GGG | + | chr8.1:8816605-8816624 | None:intergenic | 15.0% |
!!! | CGGTAAATTTTTATTTTTTA+AGG | - | chr8.1:8814478-8814497 | MS.gene036516:CDS | 15.0% |
!!! | TATAATGTTTTTTTACTAAC+GGG | - | chr8.1:8814583-8814602 | MS.gene036516:intron | 15.0% |
!!! | TGATGTTTTTTTTTTTTTGA+GGG | - | chr8.1:8816753-8816772 | MS.gene036516:intron | 15.0% |
!!! | TTGATGTTTTTTTTTTTTTG+AGG | - | chr8.1:8816752-8816771 | MS.gene036516:intron | 15.0% |
!! | AAAAGATCAATAAAGACAAA+TGG | + | chr8.1:8816991-8817010 | None:intergenic | 20.0% |
!! | ACTATTGCATTAAAATACAT+CGG | + | chr8.1:8816799-8816818 | None:intergenic | 20.0% |
!! | GCAAATATAATCAATACAAA+AGG | + | chr8.1:8815075-8815094 | None:intergenic | 20.0% |
!! | GCTATTATTATTATCATCAA+AGG | + | chr8.1:8816228-8816247 | None:intergenic | 20.0% |
!!! | ATTTTTTTTTATTTTTGGGG+GGG | + | chr8.1:8816602-8816621 | None:intergenic | 20.0% |
!!! | CATTTTTTTTTATTTTTGGG+GGG | + | chr8.1:8816603-8816622 | None:intergenic | 20.0% |
!!! | TGTTGTATGTTTTATAATCA+GGG | - | chr8.1:8817180-8817199 | MS.gene036516:intron | 20.0% |
!!! | TTAATTTGATTAAACGATTG+TGG | - | chr8.1:8816908-8816927 | MS.gene036516:intron | 20.0% |
!!! | TTGTTGTATGTTTTATAATC+AGG | - | chr8.1:8817179-8817198 | MS.gene036516:intron | 20.0% |
!!! | TTTGTCTTTATTGATCTTTT+TGG | - | chr8.1:8816991-8817010 | MS.gene036516:CDS | 20.0% |
!!! | TTTTATGAAAAATCGTAACA+GGG | - | chr8.1:8815331-8815350 | MS.gene036516:intron | 20.0% |
!!! | TTTTATTCATTGAATTCTGT+CGG | - | chr8.1:8814618-8814637 | MS.gene036516:intron | 20.0% |
!!! | TTTTTAAGGTTTTTGTTTTG+AGG | - | chr8.1:8814492-8814511 | MS.gene036516:CDS | 20.0% |
! | AATTACTTGAGCTTGAAAAA+TGG | - | chr8.1:8816850-8816869 | MS.gene036516:intron | 25.0% |
! | ACAAAGTTAAGAAGTCAATT+TGG | + | chr8.1:8816275-8816294 | None:intergenic | 25.0% |
! | ATTCAGTTTATGCTCAATTA+TGG | - | chr8.1:8814798-8814817 | MS.gene036516:intron | 25.0% |
! | ATTTATTATTCCTTGTATGC+AGG | - | chr8.1:8816305-8816324 | MS.gene036516:CDS | 25.0% |
! | CAAAATAATATGTGGTTTAG+TGG | + | chr8.1:8816962-8816981 | None:intergenic | 25.0% |
! | CTGATTGTATCTATTATTTG+AGG | - | chr8.1:8814397-8814416 | MS.gene036516:CDS | 25.0% |
! | TTAATGCAATACTTTGTCTT+TGG | - | chr8.1:8817027-8817046 | MS.gene036516:intron | 25.0% |
! | TTCAGTTTATGCTCAATTAT+GGG | - | chr8.1:8814799-8814818 | MS.gene036516:intron | 25.0% |
!! | AATTGACTTCTTAACTTTGT+TGG | - | chr8.1:8816275-8816294 | MS.gene036516:CDS | 25.0% |
!! | ACATGGTGATTGAAATTTTA+GGG | - | chr8.1:8814682-8814701 | MS.gene036516:intron | 25.0% |
!! | ATCTGAACTTTTAAATCTCT+AGG | - | chr8.1:8816694-8816713 | MS.gene036516:intron | 25.0% |
!! | CTTTTATGAAAAATCGTAAC+AGG | - | chr8.1:8815330-8815349 | MS.gene036516:intron | 25.0% |
!! | TCAAATTAAAATTTGGGACA+AGG | + | chr8.1:8816897-8816916 | None:intergenic | 25.0% |
!!! | ATTTTTAGTGAACTCTTTTC+TGG | - | chr8.1:8816422-8816441 | MS.gene036516:intron | 25.0% |
!!! | TTTTTAGTGAACTCTTTTCT+GGG | - | chr8.1:8816423-8816442 | MS.gene036516:intron | 25.0% |
!!! | TTTTTTTTTATTTTTGGGGG+GGG | + | chr8.1:8816601-8816620 | None:intergenic | 25.0% |
AAGAACCAACTGACAAAAAA+AGG | + | chr8.1:8816402-8816421 | None:intergenic | 30.0% | |
AAGCAATCAAAACAAAAGTC+CGG | + | chr8.1:8815677-8815696 | None:intergenic | 30.0% | |
AGTACTGCAAAAATCTTCAA+CGG | + | chr8.1:8816720-8816739 | None:intergenic | 30.0% | |
AGTTGAGAGATAATCATTAC+CGG | + | chr8.1:8816120-8816139 | None:intergenic | 30.0% | |
CCAAAAAATATAGTACCAGA+GGG | + | chr8.1:8816202-8816221 | None:intergenic | 30.0% | |
GTGTTCCTATTATGTGAAAA+CGG | - | chr8.1:8815363-8815382 | MS.gene036516:intron | 30.0% | |
TCCAAAAAATATAGTACCAG+AGG | + | chr8.1:8816203-8816222 | None:intergenic | 30.0% | |
TGTATCTATTATTTGAGGAC+AGG | - | chr8.1:8814402-8814421 | MS.gene036516:CDS | 30.0% | |
TGTCATATATTTGGTTACAC+AGG | - | chr8.1:8816465-8816484 | MS.gene036516:intron | 30.0% | |
TGTTCCTATTATGTGAAAAC+GGG | - | chr8.1:8815364-8815383 | MS.gene036516:intron | 30.0% | |
TTGGACTTCAGGTAAATAAT+AGG | - | chr8.1:8817046-8817065 | MS.gene036516:intron | 30.0% | |
! | ATTTGTTCCATGAGATTTTG+TGG | - | chr8.1:8815254-8815273 | MS.gene036516:intron | 30.0% |
! | GACATGGTGATTGAAATTTT+AGG | - | chr8.1:8814681-8814700 | MS.gene036516:intron | 30.0% |
! | TTTCTTCGATTTGAGTGTAA+TGG | - | chr8.1:8814297-8814316 | MS.gene036516:CDS | 30.0% |
!! | CTGTTTTAAACCACTCAAAT+TGG | - | chr8.1:8814936-8814955 | MS.gene036516:intron | 30.0% |
!! | TTGTGATTGGTTTAGGTTAT+TGG | - | chr8.1:8814713-8814732 | MS.gene036516:intron | 30.0% |
!! | TTTGTGTTTGTGATTGGTTT+AGG | - | chr8.1:8814706-8814725 | MS.gene036516:intron | 30.0% |
!!! | AACCACATATTATTTTGACG+TGG | - | chr8.1:8816965-8816984 | MS.gene036516:CDS | 30.0% |
!!! | TTTTTTTTATTTTTGGGGGG+GGG | + | chr8.1:8816600-8816619 | None:intergenic | 30.0% |
AAAACAGGGGACTGTAAATT+TGG | - | chr8.1:8816015-8816034 | MS.gene036516:intron | 35.0% | |
AAACTTACAAAATCCACGCT+GGG | + | chr8.1:8817229-8817248 | None:intergenic | 35.0% | |
AAAGTGAACCTTAGTCCTAT+TGG | - | chr8.1:8816081-8816100 | MS.gene036516:CDS | 35.0% | |
AACCAATTCAAGAACCAAAG+TGG | + | chr8.1:8816148-8816167 | None:intergenic | 35.0% | |
AATAAAAATTTACCGCGCCA+CGG | + | chr8.1:8814473-8814492 | None:intergenic | 35.0% | |
AATATTCTCTGATTTCCCTC+TGG | - | chr8.1:8816184-8816203 | MS.gene036516:CDS | 35.0% | |
ACAGTTTGATAAACAGGTGA+AGG | + | chr8.1:8815499-8815518 | None:intergenic | 35.0% | |
AGACGAATAACAGTGTCAAT+TGG | + | chr8.1:8814856-8814875 | None:intergenic | 35.0% | |
AGCAATCAAAACAAAAGTCC+GGG | + | chr8.1:8815676-8815695 | None:intergenic | 35.0% | |
ATACTTTGTCTTTGGACTTC+AGG | - | chr8.1:8817035-8817054 | MS.gene036516:intron | 35.0% | |
CACTTAATTGTGTGTGATTG+AGG | - | chr8.1:8814648-8814667 | MS.gene036516:intron | 35.0% | |
CATAAACTGAATTAACCACC+TGG | + | chr8.1:8814790-8814809 | None:intergenic | 35.0% | |
CATTGAAAACAATTCACAGC+TGG | - | chr8.1:8816374-8816393 | MS.gene036516:CDS | 35.0% | |
GAAATTGAATCCTGCATACA+AGG | + | chr8.1:8816318-8816337 | None:intergenic | 35.0% | |
GAATGTGTTGAGTAGTATGT+TGG | - | chr8.1:8816654-8816673 | MS.gene036516:intron | 35.0% | |
GACGAATAACAGTGTCAATT+GGG | + | chr8.1:8814855-8814874 | None:intergenic | 35.0% | |
GATTAAACGATTGTGGAAGT+AGG | - | chr8.1:8816915-8816934 | MS.gene036516:intron | 35.0% | |
GCATAAACCACAAAATCTCA+TGG | + | chr8.1:8815264-8815283 | None:intergenic | 35.0% | |
GTCAGCATTACATGAAAACA+GGG | - | chr8.1:8816001-8816020 | MS.gene036516:intron | 35.0% | |
GTTGAGAGATAATCATTACC+GGG | + | chr8.1:8816119-8816138 | None:intergenic | 35.0% | |
TAGATACAATCAGCTTCATC+AGG | + | chr8.1:8814390-8814409 | None:intergenic | 35.0% | |
TAGGGATTTGTGTTTGTGAT+TGG | - | chr8.1:8814700-8814719 | MS.gene036516:intron | 35.0% | |
TCAAGCTCAAGTAATTATGC+AGG | + | chr8.1:8816846-8816865 | None:intergenic | 35.0% | |
TCAGCATTACATGAAAACAG+GGG | - | chr8.1:8816002-8816021 | MS.gene036516:intron | 35.0% | |
TCCATAACAATTTAGCGACA+CGG | + | chr8.1:8815196-8815215 | None:intergenic | 35.0% | |
TGTCAGCATTACATGAAAAC+AGG | - | chr8.1:8816000-8816019 | MS.gene036516:intron | 35.0% | |
! | ACACCATATTGTTGTTGTGA+AGG | + | chr8.1:8815538-8815557 | None:intergenic | 35.0% |
! | ACTGTTATTCGTCTTTTGTG+TGG | - | chr8.1:8814862-8814881 | MS.gene036516:intron | 35.0% |
! | AGTGATTTTGTGAATGTTGC+AGG | - | chr8.1:8814321-8814340 | MS.gene036516:CDS | 35.0% |
! | ATAGGACTAAGGTTCACTTT+TGG | + | chr8.1:8816081-8816100 | None:intergenic | 35.0% |
! | ATATTGTTGTTGTGAAGGAC+CGG | + | chr8.1:8815533-8815552 | None:intergenic | 35.0% |
! | GTGATTTTGTGAATGTTGCA+GGG | - | chr8.1:8814322-8814341 | MS.gene036516:CDS | 35.0% |
! | GTTTTTGATGTGATTGTCTC+TGG | - | chr8.1:8814519-8814538 | MS.gene036516:CDS | 35.0% |
! | TATTTGAGGACAGGTTTTTG+CGG | - | chr8.1:8814411-8814430 | MS.gene036516:CDS | 35.0% |
! | TTGTCCCGTTTTCACATAAT+AGG | + | chr8.1:8815371-8815390 | None:intergenic | 35.0% |
!! | ATCCACTTTGGTTCTTGAAT+TGG | - | chr8.1:8816143-8816162 | MS.gene036516:CDS | 35.0% |
!!! | CCCTCTGGTACTATATTTTT+TGG | - | chr8.1:8816199-8816218 | MS.gene036516:CDS | 35.0% |
!!! | TGGAACCTTTTTTTGTCAGT+TGG | - | chr8.1:8816394-8816413 | MS.gene036516:intron | 35.0% |
!!! | TTTTTTTATTTTTGGGGGGG+GGG | + | chr8.1:8816599-8816618 | None:intergenic | 35.0% |
AAAACGGGACAATGCAAGTT+TGG | - | chr8.1:8815379-8815398 | MS.gene036516:intron | 40.0% | |
AAAGTACAAACCACTCGCAA+CGG | + | chr8.1:8815222-8815241 | None:intergenic | 40.0% | |
ACAAATGAGCCATGTAGAAG+AGG | + | chr8.1:8815577-8815596 | None:intergenic | 40.0% | |
ACATTACCATTGGCCCATAA+GGG | + | chr8.1:8815606-8815625 | None:intergenic | 40.0% | |
AGAGTAGTGAGGAGTTTGTA+TGG | - | chr8.1:8816547-8816566 | MS.gene036516:CDS | 40.0% | |
AGGAACACTCATTACCTGAA+AGG | - | chr8.1:8815962-8815981 | MS.gene036516:CDS | 40.0% | |
AGGAATATGCAAGAGTAGTG+AGG | - | chr8.1:8816536-8816555 | MS.gene036516:CDS | 40.0% | |
ATGTAGATATCATCATCCGC+CGG | - | chr8.1:8816044-8816063 | MS.gene036516:intron | 40.0% | |
CAAACTTACAAAATCCACGC+TGG | + | chr8.1:8817230-8817249 | None:intergenic | 40.0% | |
CAGTTTCGTTCCAATTTGAG+TGG | + | chr8.1:8814949-8814968 | None:intergenic | 40.0% | |
CCATAACAATTTAGCGACAC+GGG | + | chr8.1:8815195-8815214 | None:intergenic | 40.0% | |
CTCTCAACTCATATCCACTT+TGG | - | chr8.1:8816131-8816150 | MS.gene036516:CDS | 40.0% | |
GAGTAGTGAGGAGTTTGTAT+GGG | - | chr8.1:8816548-8816567 | MS.gene036516:CDS | 40.0% | |
GGCCACGTCAAAATAATATG+TGG | + | chr8.1:8816970-8816989 | None:intergenic | 40.0% | |
GGCTGTACAGTTTGATAAAC+AGG | + | chr8.1:8815505-8815524 | None:intergenic | 40.0% | |
GGTCCTTCACAACAACAATA+TGG | - | chr8.1:8815532-8815551 | MS.gene036516:intron | 40.0% | |
GTGCAAGTTTGATCATCCTA+CGG | - | chr8.1:8817257-8817276 | MS.gene036516:intron | 40.0% | |
TGAATTAACCACCTGGCAAA+CGG | + | chr8.1:8814783-8814802 | None:intergenic | 40.0% | |
TGCAACTGGCATATCAGAAA+GGG | + | chr8.1:8817313-8817332 | None:intergenic | 40.0% | |
TGCAAGTTTGATCATCCTAC+GGG | - | chr8.1:8817258-8817277 | MS.gene036516:intron | 40.0% | |
TGTGTTGAGTAGTATGTTGG+AGG | - | chr8.1:8816657-8816676 | MS.gene036516:intron | 40.0% | |
TTGGTAAGGTCCAGTATAGA+CGG | + | chr8.1:8815842-8815861 | None:intergenic | 40.0% | |
TTTGTGAATGTTGCAGGGTA+TGG | - | chr8.1:8814327-8814346 | MS.gene036516:CDS | 40.0% | |
! | AACTCGTTCTGGATATTCAC+CGG | + | chr8.1:8814753-8814772 | None:intergenic | 40.0% |
! | AATATGGTGTACTTGTTGCG+AGG | - | chr8.1:8815548-8815567 | MS.gene036516:intron | 40.0% |
! | ATTTGGGACAAGGTGCAATA+AGG | + | chr8.1:8816887-8816906 | None:intergenic | 40.0% |
! | CAGCGTGGATTTTGTAAGTT+TGG | - | chr8.1:8817228-8817247 | MS.gene036516:intron | 40.0% |
! | GAGTACTAGAAGGAAGTACA+GGG | + | chr8.1:8815762-8815781 | None:intergenic | 40.0% |
! | GTTTTTGCGGTTATGGTTCT+AGG | - | chr8.1:8814424-8814443 | MS.gene036516:CDS | 40.0% |
! | TGATAAACAGGTGAAGGTAC+CGG | + | chr8.1:8815493-8815512 | None:intergenic | 40.0% |
!! | GCTCATTGATGATGACATTC+TGG | + | chr8.1:8817439-8817458 | None:intergenic | 40.0% |
!! | TAGTGAACTCTTTTCTGGGA+TGG | - | chr8.1:8816427-8816446 | MS.gene036516:intron | 40.0% |
!!! | AGCTTTTGAGTTCTAGATGC+AGG | - | chr8.1:8815723-8815742 | MS.gene036516:CDS | 40.0% |
!!! | TTTTTTATTTTTGGGGGGGG+GGG | + | chr8.1:8816598-8816617 | None:intergenic | 40.0% |
AACTCGGATGATGAGGATGA+TGG | + | chr8.1:8817372-8817391 | None:intergenic | 45.0% | |
AAGGAAGGCCAATAGGACTA+AGG | + | chr8.1:8816092-8816111 | None:intergenic | 45.0% | |
AATGAGCCATGTAGAAGAGG+TGG | + | chr8.1:8815574-8815593 | None:intergenic | 45.0% | |
ACTCGGATGATGAGGATGAT+GGG | + | chr8.1:8817371-8817390 | None:intergenic | 45.0% | |
ACTGGGAGTTGCTAAAGAAC+CGG | + | chr8.1:8817544-8817563 | None:intergenic | 45.0% | |
AGATTGATAAGGACCAGCTG+AGG | + | chr8.1:8815905-8815924 | None:intergenic | 45.0% | |
ATAATCATTACCGGGCGCAA+AGG | + | chr8.1:8816111-8816130 | None:intergenic | 45.0% | |
ATTGGCAGAGGTGAAACTTG+GGG | + | chr8.1:8815469-8815488 | None:intergenic | 45.0% | |
CAACCATCTTCTCAGAGTTC+CGG | - | chr8.1:8817522-8817541 | MS.gene036516:CDS | 45.0% | |
CAAGTATCACCATCCTAGAC+AGG | - | chr8.1:8815152-8815171 | MS.gene036516:intron | 45.0% | |
CATTGGCAGAGGTGAAACTT+GGG | + | chr8.1:8815470-8815489 | None:intergenic | 45.0% | |
CTACATGGCTCATTTGTCCA+GGG | - | chr8.1:8815580-8815599 | MS.gene036516:intron | 45.0% | |
CTAGGACTCAGTTGAATGAG+TGG | - | chr8.1:8816500-8816519 | MS.gene036516:intron | 45.0% | |
GAATTAACCACCTGGCAAAC+GGG | + | chr8.1:8814782-8814801 | None:intergenic | 45.0% | |
GACATTACCATTGGCCCATA+AGG | + | chr8.1:8815607-8815626 | None:intergenic | 45.0% | |
GACTTTGTCAACGGTTGTAC+CGG | - | chr8.1:8817482-8817501 | MS.gene036516:intron | 45.0% | |
GAGGGACCAGAAGATTGATA+AGG | + | chr8.1:8815916-8815935 | None:intergenic | 45.0% | |
GATGACATTCTGGATGAAGC+AGG | + | chr8.1:8817429-8817448 | None:intergenic | 45.0% | |
GATTGATAAGGACCAGCTGA+GGG | + | chr8.1:8815904-8815923 | None:intergenic | 45.0% | |
GCTGGTCCTTATCAATCTTC+TGG | - | chr8.1:8815907-8815926 | MS.gene036516:CDS | 45.0% | |
GGTGAATATCCAGAACGAGT+TGG | - | chr8.1:8814752-8814771 | MS.gene036516:intron | 45.0% | |
GTGCAACTGGCATATCAGAA+AGG | + | chr8.1:8817314-8817333 | None:intergenic | 45.0% | |
GTGTGATTGAGGATGTGCAT+TGG | - | chr8.1:8814659-8814678 | MS.gene036516:intron | 45.0% | |
TAGCTAGCTAGCTAGCTGTA+AGG | - | chr8.1:8816244-8816263 | MS.gene036516:CDS | 45.0% | |
TCACCAACAACCGTCTATAC+TGG | - | chr8.1:8815829-8815848 | MS.gene036516:CDS | 45.0% | |
TCAGAAAGGGAAGAAGCAGA+TGG | + | chr8.1:8817300-8817319 | None:intergenic | 45.0% | |
TCCTTCAGGTAGTAGTCAGA+AGG | - | chr8.1:8815942-8815961 | MS.gene036516:CDS | 45.0% | |
TCCTTCTGACTACTACCTGA+AGG | + | chr8.1:8815946-8815965 | None:intergenic | 45.0% | |
TCTACATGGCTCATTTGTCC+AGG | - | chr8.1:8815579-8815598 | MS.gene036516:intron | 45.0% | |
TCTAGTACTCCGTTGAGTGT+TGG | - | chr8.1:8815772-8815791 | MS.gene036516:CDS | 45.0% | |
TGAGTGGTGTGTGCTTTACT+AGG | - | chr8.1:8816516-8816535 | MS.gene036516:intron | 45.0% | |
TGGGCATCTGATTGAGAAAC+CGG | + | chr8.1:8817504-8817523 | None:intergenic | 45.0% | |
TTATGGATATCCGTTGCGAG+TGG | - | chr8.1:8815209-8815228 | MS.gene036516:intron | 45.0% | |
TTGAGGATGTGCATTGGACA+TGG | - | chr8.1:8814665-8814684 | MS.gene036516:intron | 45.0% | |
! | ACACTCAACGGAGTACTAGA+AGG | + | chr8.1:8815772-8815791 | None:intergenic | 45.0% |
! | AGGACAGGTTTTTGCGGTTA+TGG | - | chr8.1:8814417-8814436 | MS.gene036516:CDS | 45.0% |
! | CCCGTGTCGCTAAATTGTTA+TGG | - | chr8.1:8815192-8815211 | MS.gene036516:intron | 45.0% |
! | GGAACTCTGAGAAGATGGTT+GGG | + | chr8.1:8817523-8817542 | None:intergenic | 45.0% |
! | GGAGTACTAGAAGGAAGTAC+AGG | + | chr8.1:8815763-8815782 | None:intergenic | 45.0% |
! | GTATAGACGGTTGTTGGTGA+AGG | + | chr8.1:8815829-8815848 | None:intergenic | 45.0% |
! | TCTAGGATGGTGATACTTGC+AGG | + | chr8.1:8815151-8815170 | None:intergenic | 45.0% |
! | TTAGCTTGAGGTGTGAGAGA+CGG | + | chr8.1:8817583-8817602 | None:intergenic | 45.0% |
! | TTGGTTCGACGCAGCTTTAT+GGG | - | chr8.1:8815791-8815810 | MS.gene036516:CDS | 45.0% |
! | TTTAGGTTATTGGAGCTGCG+AGG | - | chr8.1:8814723-8814742 | MS.gene036516:intron | 45.0% |
!! | AAGCAGATGGACTGTAACTC+AGG | + | chr8.1:8817287-8817306 | None:intergenic | 45.0% |
!! | AGCAGATGGACTGTAACTCA+GGG | + | chr8.1:8817286-8817305 | None:intergenic | 45.0% |
!! | AGCTGGCTTGACTTTGTCAA+CGG | - | chr8.1:8817473-8817492 | MS.gene036516:intron | 45.0% |
!! | CTGGTGATGGTGCTATCATT+TGG | + | chr8.1:8815444-8815463 | None:intergenic | 45.0% |
!!! | TTTTTATTTTTGGGGGGGGG+GGG | + | chr8.1:8816597-8816616 | None:intergenic | 45.0% |
AAGGGCTCCAGCCTGAAAAA+GGG | + | chr8.1:8815642-8815661 | None:intergenic | 50.0% | |
ACTGGACCTTACCAATCCTC+TGG | - | chr8.1:8815847-8815866 | MS.gene036516:CDS | 50.0% | |
ACTTGCATCAGGATCCAGCA+AGG | - | chr8.1:8817401-8817420 | MS.gene036516:intron | 50.0% | |
AGAGGTGAAACTTGGGGAAC+TGG | + | chr8.1:8815463-8815482 | None:intergenic | 50.0% | |
AGATTGGTAAGGACCAGCTG+AGG | + | chr8.1:8815875-8815894 | None:intergenic | 50.0% | |
AGCCCTTATCAGGTATGTCC+CGG | - | chr8.1:8815655-8815674 | MS.gene036516:CDS | 50.0% | |
AGGACGGGATCGTGCAAATT+TGG | - | chr8.1:8815120-8815139 | MS.gene036516:intron | 50.0% | |
AGTCCGGGACATACCTGATA+AGG | + | chr8.1:8815661-8815680 | None:intergenic | 50.0% | |
AGTTTCACCTCTGCCAATGC+CGG | - | chr8.1:8815471-8815490 | MS.gene036516:intron | 50.0% | |
ATATCATCATCCGCCGGACA+TGG | - | chr8.1:8816050-8816069 | MS.gene036516:intron | 50.0% | |
ATTCCATCATCCACAGCCTG+CGG | - | chr8.1:8815414-8815433 | MS.gene036516:intron | 50.0% | |
CAATCTTCTGGTCCCTCAAC+CGG | - | chr8.1:8815919-8815938 | MS.gene036516:CDS | 50.0% | |
CACAGGTCTGTCTGATCTCT+AGG | - | chr8.1:8816482-8816501 | MS.gene036516:intron | 50.0% | |
CATCCTCATCATCCGAGTTG+AGG | - | chr8.1:8817373-8817392 | MS.gene036516:CDS | 50.0% | |
CATTTGTCCAGGGCCCTTAT+GGG | - | chr8.1:8815590-8815609 | MS.gene036516:intron | 50.0% | |
CCTGAAAAAGGGACCATGGT+GGG | + | chr8.1:8815631-8815650 | None:intergenic | 50.0% | |
CGCTGGGTATAATGAGTGCA+AGG | + | chr8.1:8817213-8817232 | None:intergenic | 50.0% | |
CTCGGATGATGAGGATGATG+GGG | + | chr8.1:8817370-8817389 | None:intergenic | 50.0% | |
CTGAAAAAGGGACCATGGTG+GGG | + | chr8.1:8815630-8815649 | None:intergenic | 50.0% | |
CTGACTACTACCTGAAGGAC+CGG | + | chr8.1:8815941-8815960 | None:intergenic | 50.0% | |
CTGGATCCTGATGCAAGTTC+AGG | + | chr8.1:8817399-8817418 | None:intergenic | 50.0% | |
GAAACTTGGGGAACTGGTGA+TGG | + | chr8.1:8815457-8815476 | None:intergenic | 50.0% | |
GAGGGACCAGAAGATTGGTA+AGG | + | chr8.1:8815886-8815905 | None:intergenic | 50.0% | |
GATTGGTAAGGACCAGCTGA+GGG | + | chr8.1:8815874-8815893 | None:intergenic | 50.0% | |
GCTGGTCCTTACCAATCTTC+TGG | - | chr8.1:8815877-8815896 | MS.gene036516:CDS | 50.0% | |
GGTCCAGTATAGACGGTTGT+TGG | + | chr8.1:8815835-8815854 | None:intergenic | 50.0% | |
GTATCACCATCCTAGACAGG+CGG | - | chr8.1:8815155-8815174 | MS.gene036516:intron | 50.0% | |
GTCCGGGACATACCTGATAA+GGG | + | chr8.1:8815660-8815679 | None:intergenic | 50.0% | |
GTGAATGTTGCAGGGTATGG+TGG | - | chr8.1:8814330-8814349 | MS.gene036516:CDS | 50.0% | |
TAAGGGCTCCAGCCTGAAAA+AGG | + | chr8.1:8815643-8815662 | None:intergenic | 50.0% | |
TATCATCATCCGCCGGACAT+GGG | - | chr8.1:8816051-8816070 | MS.gene036516:intron | 50.0% | |
TCAGCTTCATCAGGTCGTTG+TGG | + | chr8.1:8814381-8814400 | None:intergenic | 50.0% | |
TCATGCTGCAGTACTATGCG+AGG | - | chr8.1:8815100-8815119 | MS.gene036516:intron | 50.0% | |
TCATTTGTCCAGGGCCCTTA+TGG | - | chr8.1:8815589-8815608 | MS.gene036516:intron | 50.0% | |
TCTTGCATGCATGTCAGTGC+AGG | - | chr8.1:8814998-8815017 | MS.gene036516:intron | 50.0% | |
TGAAAAAGGGACCATGGTGG+GGG | + | chr8.1:8815629-8815648 | None:intergenic | 50.0% | |
TGCAAGTTCAGGCCTCAACT+CGG | + | chr8.1:8817388-8817407 | None:intergenic | 50.0% | |
TGCACTCATTATACCCAGCG+TGG | - | chr8.1:8817213-8817232 | MS.gene036516:intron | 50.0% | |
TGCGTCGAACCAACACTCAA+CGG | + | chr8.1:8815784-8815803 | None:intergenic | 50.0% | |
TGCTGACATTCCTGCTGATC+AGG | + | chr8.1:8815988-8816007 | None:intergenic | 50.0% | |
TGTTGTTGTGAAGGACCGGA+CGG | + | chr8.1:8815529-8815548 | None:intergenic | 50.0% | |
TTGAGGCCTGAACTTGCATC+AGG | - | chr8.1:8817390-8817409 | MS.gene036516:intron | 50.0% | |
TTTAACCATCCACGTGACCG+TGG | - | chr8.1:8814453-8814472 | MS.gene036516:CDS | 50.0% | |
! | AATGGTAATGTCCCCCACCA+TGG | - | chr8.1:8815615-8815634 | MS.gene036516:intron | 50.0% |
! | AGTACCTTCATCAGCACCGA+CGG | + | chr8.1:8814221-8814240 | None:intergenic | 50.0% |
! | ATGGTGGGGGACATTACCAT+TGG | + | chr8.1:8815616-8815635 | None:intergenic | 50.0% |
! | CGGAACTCTGAGAAGATGGT+TGG | + | chr8.1:8817524-8817543 | None:intergenic | 50.0% |
! | GAACCGGAACTCTGAGAAGA+TGG | + | chr8.1:8817528-8817547 | None:intergenic | 50.0% |
! | GCATTGGCAGAGGTGAAACT+TGG | + | chr8.1:8815471-8815490 | None:intergenic | 50.0% |
!! | ACTTTTGGTGCACCCATGTC+CGG | + | chr8.1:8816066-8816085 | None:intergenic | 50.0% |
!! | AGCACATCGACTTCTTCAGC+TGG | - | chr8.1:8817456-8817475 | MS.gene036516:intron | 50.0% |
!! | GCGGTTATGGTTCTAGGTGT+CGG | - | chr8.1:8814430-8814449 | MS.gene036516:CDS | 50.0% |
!! | GTTGGTTCGACGCAGCTTTA+TGG | - | chr8.1:8815790-8815809 | MS.gene036516:CDS | 50.0% |
!! | TATGGTGGATTGGTTGGTGG+TGG | - | chr8.1:8814345-8814364 | MS.gene036516:CDS | 50.0% |
!! | TGATGGGGCAAGAGTACCAA+TGG | + | chr8.1:8817355-8817374 | None:intergenic | 50.0% |
!! | TGTTGCAGGGTATGGTGGAT+TGG | - | chr8.1:8814335-8814354 | MS.gene036516:CDS | 50.0% |
!!! | TTTTATTTTTGGGGGGGGGG+GGG | + | chr8.1:8816596-8816615 | None:intergenic | 50.0% |
ACCTGAAAGGCCTGATCAGC+AGG | - | chr8.1:8815975-8815994 | MS.gene036516:CDS | 55.0% | |
ACTACCTGAAGGACCGGTTG+AGG | + | chr8.1:8815935-8815954 | None:intergenic | 55.0% | |
AGGCCTCAACTCGGATGATG+AGG | + | chr8.1:8817379-8817398 | None:intergenic | 55.0% | |
ATTGGAGCTGCGAGGATTGC+CGG | - | chr8.1:8814731-8814750 | MS.gene036516:intron | 55.0% | |
CAAACTGTACAGCCTCCGTC+CGG | - | chr8.1:8815511-8815530 | MS.gene036516:intron | 55.0% | |
CAATCTTCTGGTCCCTCAGC+TGG | - | chr8.1:8815889-8815908 | MS.gene036516:CDS | 55.0% | |
CAGCTGAGGGACCAGAAGAT+TGG | + | chr8.1:8815891-8815910 | None:intergenic | 55.0% | |
CCAGCCTGAAAAAGGGACCA+TGG | + | chr8.1:8815635-8815654 | None:intergenic | 55.0% | |
CCAGTTGCACCCTATCCTGT+GGG | - | chr8.1:8817324-8817343 | MS.gene036516:CDS | 55.0% | |
CTACCTGAAGGACCGGTTGA+GGG | + | chr8.1:8815934-8815953 | None:intergenic | 55.0% | |
CTGCAGTACTATGCGAGGAC+GGG | - | chr8.1:8815105-8815124 | MS.gene036516:intron | 55.0% | |
CTGTAACTCAGGGATCCCGT+AGG | + | chr8.1:8817276-8817295 | None:intergenic | 55.0% | |
GAGACGACCCATCGTTAGCT+CGG | + | chr8.1:8814165-8814184 | None:intergenic | 55.0% | |
GCCTGAAAAAGGGACCATGG+TGG | + | chr8.1:8815632-8815651 | None:intergenic | 55.0% | |
GCTGCAGTACTATGCGAGGA+CGG | - | chr8.1:8815104-8815123 | MS.gene036516:intron | 55.0% | |
TATCCTGTGGGTTCCGCCAT+TGG | - | chr8.1:8817336-8817355 | MS.gene036516:CDS | 55.0% | |
TCATTACCGGGCGCAAAGGA+AGG | + | chr8.1:8816107-8816126 | None:intergenic | 55.0% | |
TCCTGCTGATCAGGCCTTTC+AGG | + | chr8.1:8815979-8815998 | None:intergenic | 55.0% | |
TTCAGGCTGGAGCCCTTATC+AGG | - | chr8.1:8815645-8815664 | MS.gene036516:CDS | 55.0% | |
TTCCATCATCCACAGCCTGC+GGG | - | chr8.1:8815415-8815434 | MS.gene036516:intron | 55.0% | |
! | AATGGCGGAACCCACAGGAT+AGG | + | chr8.1:8817337-8817356 | None:intergenic | 55.0% |
! | ATGGCGGAACCCACAGGATA+GGG | + | chr8.1:8817336-8817355 | None:intergenic | 55.0% |
! | CCCACCATGGTCCCTTTTTC+AGG | - | chr8.1:8815628-8815647 | MS.gene036516:CDS | 55.0% |
! | GAGGGACCAGAGGATTGGTA+AGG | + | chr8.1:8815856-8815875 | None:intergenic | 55.0% |
!! | ACAGGTGAAGGTACCGGCAT+TGG | + | chr8.1:8815487-8815506 | None:intergenic | 55.0% |
!! | ACTTCCGTCGGTGCTGATGA+AGG | - | chr8.1:8814214-8814233 | MS.gene036516:CDS | 55.0% |
!! | AGAGACGGTGCTACTTGTGG+TGG | + | chr8.1:8817568-8817587 | None:intergenic | 55.0% |
!! | GCAGGGTATGGTGGATTGGT+TGG | - | chr8.1:8814339-8814358 | MS.gene036516:CDS | 55.0% |
!! | GGGTATGGTGGATTGGTTGG+TGG | - | chr8.1:8814342-8814361 | MS.gene036516:CDS | 55.0% |
!! | GTGAGAGACGGTGCTACTTG+TGG | + | chr8.1:8817571-8817590 | None:intergenic | 55.0% |
!! | GTGCTACTTGTGGTGGCACT+GGG | + | chr8.1:8817561-8817580 | None:intergenic | 55.0% |
!! | TATTGGCCTTCCTTTGCGCC+CGG | - | chr8.1:8816098-8816117 | MS.gene036516:CDS | 55.0% |
!! | TGGGGCAAGAGTACCAATGG+CGG | + | chr8.1:8817352-8817371 | None:intergenic | 55.0% |
!!! | CCATGGTCCCTTTTTCAGGC+TGG | - | chr8.1:8815632-8815651 | MS.gene036516:CDS | 55.0% |
!!! | TTTATTTTTGGGGGGGGGGG+GGG | + | chr8.1:8816595-8816614 | None:intergenic | 55.0% |
ACGGAAGTCCATTCCGGCGA+CGG | + | chr8.1:8814202-8814221 | None:intergenic | 60.0% | |
ACTCTGATCCGTCGCCGGAA+TGG | - | chr8.1:8814191-8814210 | MS.gene036516:CDS | 60.0% | |
AGGTACGGCCGAGCTAACGA+TGG | - | chr8.1:8814154-8814173 | MS.gene036516:CDS | 60.0% | |
AGTTGGACAGCCCGTTTGCC+AGG | - | chr8.1:8814769-8814788 | MS.gene036516:intron | 60.0% | |
CAATCCTCTGGTCCCTCAGC+TGG | - | chr8.1:8815859-8815878 | MS.gene036516:CDS | 60.0% | |
CAGCTGAGGGACCAGAGGAT+TGG | + | chr8.1:8815861-8815880 | None:intergenic | 60.0% | |
CCCACAGGATAGGGTGCAAC+TGG | + | chr8.1:8817327-8817346 | None:intergenic | 60.0% | |
GCCAGTTGCACCCTATCCTG+TGG | - | chr8.1:8817323-8817342 | MS.gene036516:CDS | 60.0% | |
GCGAGGCCACCTCTTCTACA+TGG | - | chr8.1:8815565-8815584 | MS.gene036516:intron | 60.0% | |
GCTATCATTTGGCCACCCGC+AGG | + | chr8.1:8815433-8815452 | None:intergenic | 60.0% | |
GGATGAAGCAGGCTCCTTGC+TGG | + | chr8.1:8817418-8817437 | None:intergenic | 60.0% | |
GGGCGCAAAGGAAGGCCAAT+AGG | + | chr8.1:8816099-8816118 | None:intergenic | 60.0% | |
GGTACGGCCGAGCTAACGAT+GGG | - | chr8.1:8814155-8814174 | MS.gene036516:CDS | 60.0% | |
GTAGTTCCTGCCGCCTGTCT+AGG | + | chr8.1:8815168-8815187 | None:intergenic | 60.0% | |
GTTGCACTCTGATCCGTCGC+CGG | - | chr8.1:8814186-8814205 | MS.gene036516:CDS | 60.0% | |
TGTTGTGAAGGACCGGACGG+AGG | + | chr8.1:8815526-8815545 | None:intergenic | 60.0% | |
TTCCTGCCGCCTGTCTAGGA+TGG | + | chr8.1:8815164-8815183 | None:intergenic | 60.0% | |
! | ACGGGCTGTCCAACTCGTTC+TGG | + | chr8.1:8814764-8814783 | None:intergenic | 60.0% |
! | GCACCGACGGAAGTCCATTC+CGG | + | chr8.1:8814208-8814227 | None:intergenic | 60.0% |
! | GTACCAATGGCGGAACCCAC+AGG | + | chr8.1:8817342-8817361 | None:intergenic | 60.0% |
! | TCGCCGGAATGGACTTCCGT+CGG | - | chr8.1:8814202-8814221 | MS.gene036516:CDS | 60.0% |
! | TTTGGTGCACCCATGTCCGG+CGG | + | chr8.1:8816063-8816082 | None:intergenic | 60.0% |
!! | GAAGGTACCGGCATTGGCAG+AGG | + | chr8.1:8815481-8815500 | None:intergenic | 60.0% |
!! | GGAAGTACAGGGCTTGCTGC+TGG | + | chr8.1:8815751-8815770 | None:intergenic | 60.0% |
!! | GGTGCTACTTGTGGTGGCAC+TGG | + | chr8.1:8817562-8817581 | None:intergenic | 60.0% |
!!! | TTATTTTTGGGGGGGGGGGG+GGG | + | chr8.1:8816594-8816613 | None:intergenic | 60.0% |
AGGACCAGCTGAGGGACCAG+AGG | + | chr8.1:8815866-8815885 | None:intergenic | 65.0% | |
ATTTGGCCACCCGCAGGCTG+TGG | + | chr8.1:8815427-8815446 | None:intergenic | 65.0% | |
CACCATCCTAGACAGGCGGC+AGG | - | chr8.1:8815159-8815178 | MS.gene036516:intron | 65.0% | |
CACCCGCAGGCTGTGGATGA+TGG | + | chr8.1:8815420-8815439 | None:intergenic | 65.0% | |
CATCATCCACAGCCTGCGGG+TGG | - | chr8.1:8815418-8815437 | MS.gene036516:intron | 65.0% | |
CCAGGGCCCTTATGGGCCAA+TGG | - | chr8.1:8815597-8815616 | MS.gene036516:intron | 65.0% | |
CCATTGGCCCATAAGGGCCC+TGG | + | chr8.1:8815600-8815619 | None:intergenic | 65.0% | |
GGTCCCTCAACCGGTCCTTC+AGG | - | chr8.1:8815928-8815947 | MS.gene036516:CDS | 65.0% | |
TGGACAGCCCGTTTGCCAGG+TGG | - | chr8.1:8814772-8814791 | MS.gene036516:intron | 65.0% | |
TTTACCGCGCCACGGTCACG+TGG | + | chr8.1:8814465-8814484 | None:intergenic | 65.0% | |
!!! | TATTTTTGGGGGGGGGGGGG+GGG | + | chr8.1:8816593-8816612 | None:intergenic | 65.0% |
CCATCCACGTGACCGTGGCG+CGG | - | chr8.1:8814458-8814477 | MS.gene036516:CDS | 70.0% | |
!! | ATTTTTGGGGGGGGGGGGGG+GGG | + | chr8.1:8816592-8816611 | None:intergenic | 70.0% |
CCGCGCCACGGTCACGTGGA+TGG | + | chr8.1:8814461-8814480 | None:intergenic | 75.0% | |
!! | TTTTTGGGGGGGGGGGGGGG+GGG | + | chr8.1:8816591-8816610 | None:intergenic | 75.0% |
!!! | TTTTGGGGGGGGGGGGGGGG+GGG | + | chr8.1:8816590-8816609 | None:intergenic | 80.0% |
! | GGGGGGGGGGGGGGGGGGGA+GGG | + | chr8.1:8816586-8816605 | None:intergenic | 95.0% |
! | TGGGGGGGGGGGGGGGGGGG+AGG | + | chr8.1:8816587-8816606 | None:intergenic | 95.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.1 | gene | 8814145 | 8817602 | 8814145 | ID=MS.gene036516 |
chr8.1 | mRNA | 8814145 | 8817602 | 8814145 | ID=MS.gene036516.t1;Parent=MS.gene036516 |
chr8.1 | exon | 8817512 | 8817602 | 8817512 | ID=MS.gene036516.t1.exon1;Parent=MS.gene036516.t1 |
chr8.1 | CDS | 8817512 | 8817602 | 8817512 | ID=cds.MS.gene036516.t1;Parent=MS.gene036516.t1 |
chr8.1 | exon | 8817268 | 8817404 | 8817268 | ID=MS.gene036516.t1.exon2;Parent=MS.gene036516.t1 |
chr8.1 | CDS | 8817268 | 8817404 | 8817268 | ID=cds.MS.gene036516.t1;Parent=MS.gene036516.t1 |
chr8.1 | exon | 8816957 | 8817019 | 8816957 | ID=MS.gene036516.t1.exon3;Parent=MS.gene036516.t1 |
chr8.1 | CDS | 8816957 | 8817019 | 8816957 | ID=cds.MS.gene036516.t1;Parent=MS.gene036516.t1 |
chr8.1 | exon | 8816517 | 8816636 | 8816517 | ID=MS.gene036516.t1.exon4;Parent=MS.gene036516.t1 |
chr8.1 | CDS | 8816517 | 8816636 | 8816517 | ID=cds.MS.gene036516.t1;Parent=MS.gene036516.t1 |
chr8.1 | exon | 8816081 | 8816395 | 8816081 | ID=MS.gene036516.t1.exon5;Parent=MS.gene036516.t1 |
chr8.1 | CDS | 8816081 | 8816395 | 8816081 | ID=cds.MS.gene036516.t1;Parent=MS.gene036516.t1 |
chr8.1 | exon | 8815628 | 8816002 | 8815628 | ID=MS.gene036516.t1.exon6;Parent=MS.gene036516.t1 |
chr8.1 | CDS | 8815628 | 8816002 | 8815628 | ID=cds.MS.gene036516.t1;Parent=MS.gene036516.t1 |
chr8.1 | exon | 8814145 | 8814546 | 8814145 | ID=MS.gene036516.t1.exon7;Parent=MS.gene036516.t1 |
chr8.1 | CDS | 8814145 | 8814546 | 8814145 | ID=cds.MS.gene036516.t1;Parent=MS.gene036516.t1 |
Gene Sequence |
Protein sequence |