Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene20707.t1 | XP_024639704.1 | 99.3 | 402 | 2 | 1 | 1 | 401 | 32 | 433 | 4.90E-149 | 537.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene20707.t1 | Q84W91 | 69.5 | 410 | 108 | 7 | 1 | 404 | 32 | 430 | 1.3e-76 | 288.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene20707.t1 | A0A1S2XZ87 | 89.2 | 407 | 35 | 3 | 1 | 404 | 32 | 432 | 1.0e-124 | 456.4 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene20707.t1 | TF | C3H |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene049254 | MS.gene20707 | -0.801002 | 1.11E-48 | -1.69E-46 |
MS.gene049652 | MS.gene20707 | -0.819624 | 1.05E-52 | -1.69E-46 |
MS.gene049825 | MS.gene20707 | -0.825323 | 4.99E-54 | -1.69E-46 |
MS.gene049873 | MS.gene20707 | -0.817374 | 3.41E-52 | -1.69E-46 |
MS.gene050031 | MS.gene20707 | -0.801606 | 8.32E-49 | -1.69E-46 |
MS.gene051699 | MS.gene20707 | -0.804238 | 2.38E-49 | -1.69E-46 |
MS.gene052358 | MS.gene20707 | 0.813716 | 2.22E-51 | -1.69E-46 |
MS.gene053006 | MS.gene20707 | -0.806442 | 8.21E-50 | -1.69E-46 |
MS.gene053298 | MS.gene20707 | -0.819127 | 1.37E-52 | -1.69E-46 |
MS.gene053340 | MS.gene20707 | -0.8274 | 1.60E-54 | -1.69E-46 |
MS.gene053963 | MS.gene20707 | -0.843024 | 1.81E-58 | -1.69E-46 |
MS.gene054222 | MS.gene20707 | -0.833434 | 5.34E-56 | -1.69E-46 |
MS.gene055555 | MS.gene20707 | -0.812081 | 5.07E-51 | -1.69E-46 |
MS.gene056091 | MS.gene20707 | -0.831914 | 1.27E-55 | -1.69E-46 |
MS.gene057026 | MS.gene20707 | -0.818585 | 1.82E-52 | -1.69E-46 |
MS.gene057102 | MS.gene20707 | -0.816832 | 4.51E-52 | -1.69E-46 |
MS.gene058037 | MS.gene20707 | -0.804902 | 1.73E-49 | -1.69E-46 |
MS.gene058279 | MS.gene20707 | -0.802582 | 5.24E-49 | -1.69E-46 |
MS.gene058498 | MS.gene20707 | -0.812629 | 3.85E-51 | -1.69E-46 |
MS.gene058500 | MS.gene20707 | -0.809458 | 1.87E-50 | -1.69E-46 |
MS.gene05985 | MS.gene20707 | 0.851228 | 1.02E-60 | -1.69E-46 |
MS.gene059935 | MS.gene20707 | -0.820283 | 7.44E-53 | -1.69E-46 |
MS.gene060365 | MS.gene20707 | -0.817479 | 3.23E-52 | -1.69E-46 |
MS.gene060521 | MS.gene20707 | -0.805667 | 1.20E-49 | -1.69E-46 |
MS.gene060879 | MS.gene20707 | -0.815423 | 9.32E-52 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene041531 | MS.gene20707 | PPI |
MS.gene58928 | MS.gene20707 | PPI |
MS.gene004436 | MS.gene20707 | PPI |
MS.gene036516 | MS.gene20707 | PPI |
MS.gene035301 | MS.gene20707 | PPI |
MS.gene96224 | MS.gene20707 | PPI |
MS.gene002747 | MS.gene20707 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene20707.t1 | MTR_1g088875 | 98.095 | 315 | 5 | 1 | 1 | 314 | 32 | 346 | 0.0 | 625 |
MS.gene20707.t1 | MTR_1g088875 | 53.947 | 76 | 33 | 1 | 263 | 336 | 91 | 166 | 4.72e-21 | 94.4 |
MS.gene20707.t1 | MTR_1g088875 | 99.038 | 312 | 2 | 1 | 1 | 311 | 32 | 343 | 0.0 | 624 |
MS.gene20707.t1 | MTR_1g088875 | 53.947 | 76 | 33 | 1 | 263 | 336 | 91 | 166 | 4.47e-21 | 94.4 |
MS.gene20707.t1 | MTR_1g088875 | 99.038 | 312 | 2 | 1 | 1 | 311 | 32 | 343 | 0.0 | 624 |
MS.gene20707.t1 | MTR_1g088875 | 53.947 | 76 | 33 | 1 | 263 | 336 | 91 | 166 | 4.33e-21 | 94.4 |
MS.gene20707.t1 | MTR_4g119280 | 55.315 | 461 | 153 | 8 | 12 | 425 | 41 | 495 | 8.41e-145 | 423 |
MS.gene20707.t1 | MTR_2g019740 | 52.969 | 421 | 169 | 10 | 12 | 410 | 42 | 455 | 1.72e-126 | 375 |
MS.gene20707.t1 | MTR_4g119280 | 53.043 | 345 | 112 | 6 | 12 | 312 | 41 | 379 | 2.48e-112 | 335 |
MS.gene20707.t1 | MTR_4g119280 | 48.624 | 109 | 50 | 3 | 263 | 367 | 88 | 194 | 2.52e-23 | 101 |
MS.gene20707.t1 | MTR_7g079840 | 48.619 | 362 | 170 | 8 | 1 | 352 | 1 | 356 | 1.18e-107 | 324 |
MS.gene20707.t1 | MTR_7g079840 | 48.619 | 362 | 170 | 8 | 1 | 352 | 11 | 366 | 1.95e-107 | 324 |
MS.gene20707.t1 | MTR_5g085200 | 36.923 | 390 | 209 | 10 | 14 | 399 | 44 | 400 | 1.51e-76 | 244 |
MS.gene20707.t1 | MTR_5g085200 | 44.706 | 85 | 46 | 1 | 4 | 88 | 260 | 343 | 2.65e-15 | 77.8 |
MS.gene20707.t1 | MTR_5g085200 | 38.614 | 101 | 50 | 2 | 259 | 354 | 40 | 133 | 2.90e-15 | 77.8 |
MS.gene20707.t1 | MTR_4g104260 | 36.207 | 348 | 168 | 13 | 10 | 340 | 227 | 537 | 4.77e-61 | 208 |
MS.gene20707.t1 | MTR_4g104260 | 41.880 | 117 | 65 | 1 | 59 | 175 | 458 | 571 | 1.84e-21 | 97.4 |
MS.gene20707.t1 | MTR_3g075190 | 34.985 | 343 | 177 | 9 | 8 | 336 | 165 | 475 | 6.14e-59 | 201 |
MS.gene20707.t1 | MTR_3g075190 | 47.368 | 114 | 54 | 3 | 58 | 170 | 399 | 507 | 2.53e-20 | 93.6 |
MS.gene20707.t1 | MTR_3g075190 | 35.000 | 100 | 58 | 2 | 263 | 359 | 171 | 266 | 1.06e-12 | 70.1 |
MS.gene20707.t1 | MTR_1g088880 | 96.970 | 99 | 3 | 0 | 340 | 438 | 1 | 99 | 5.44e-56 | 180 |
MS.gene20707.t1 | MTR_8g446930 | 33.803 | 355 | 197 | 9 | 8 | 336 | 132 | 474 | 9.54e-56 | 192 |
MS.gene20707.t1 | MTR_8g446930 | 36.025 | 161 | 56 | 3 | 22 | 136 | 317 | 476 | 2.52e-23 | 102 |
MS.gene20707.t1 | MTR_8g446930 | 34.237 | 295 | 165 | 7 | 60 | 336 | 41 | 324 | 3.95e-47 | 166 |
MS.gene20707.t1 | MTR_8g446930 | 31.173 | 324 | 143 | 10 | 12 | 292 | 38 | 324 | 4.91e-36 | 136 |
MS.gene20707.t1 | MTR_8g446930 | 36.025 | 161 | 56 | 3 | 22 | 136 | 167 | 326 | 6.23e-24 | 102 |
MS.gene20707.t1 | MTR_8g446930 | 43.023 | 86 | 36 | 2 | 256 | 336 | 33 | 110 | 3.59e-17 | 83.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene20707.t1 | AT2G47850 | 66.742 | 445 | 130 | 8 | 1 | 438 | 32 | 465 | 0.0 | 552 |
MS.gene20707.t1 | AT2G47850 | 66.742 | 445 | 130 | 8 | 1 | 438 | 32 | 465 | 0.0 | 552 |
MS.gene20707.t1 | AT2G47850 | 61.573 | 445 | 127 | 9 | 1 | 438 | 32 | 439 | 1.33e-170 | 486 |
MS.gene20707.t1 | AT2G47850 | 63.818 | 351 | 112 | 7 | 95 | 438 | 1 | 343 | 2.42e-136 | 395 |
MS.gene20707.t1 | AT2G47850 | 53.571 | 84 | 39 | 0 | 52 | 135 | 157 | 240 | 1.34e-23 | 101 |
MS.gene20707.t1 | AT2G47850 | 41.414 | 99 | 51 | 2 | 12 | 103 | 162 | 260 | 2.33e-16 | 80.5 |
MS.gene20707.t1 | AT5G18550 | 49.087 | 438 | 186 | 12 | 12 | 431 | 14 | 432 | 1.39e-123 | 366 |
MS.gene20707.t1 | AT5G18550 | 49.543 | 438 | 184 | 13 | 12 | 431 | 46 | 464 | 1.59e-123 | 367 |
MS.gene20707.t1 | AT5G18550 | 53.077 | 390 | 148 | 11 | 12 | 383 | 46 | 418 | 5.47e-123 | 365 |
MS.gene20707.t1 | AT5G18550 | 48.046 | 435 | 182 | 13 | 12 | 431 | 46 | 451 | 1.75e-116 | 348 |
MS.gene20707.t1 | AT3G06410 | 53.704 | 378 | 149 | 9 | 1 | 359 | 33 | 403 | 3.47e-115 | 345 |
MS.gene20707.t1 | AT3G02830 | 46.409 | 362 | 164 | 7 | 1 | 352 | 21 | 362 | 3.26e-102 | 310 |
MS.gene20707.t1 | AT3G02830 | 46.409 | 362 | 164 | 7 | 1 | 352 | 1 | 342 | 4.65e-102 | 309 |
MS.gene20707.t1 | AT5G16540 | 43.223 | 391 | 152 | 13 | 1 | 376 | 22 | 357 | 1.74e-90 | 279 |
MS.gene20707.t1 | AT5G16540 | 37.107 | 159 | 78 | 6 | 263 | 412 | 84 | 229 | 2.83e-20 | 92.4 |
MS.gene20707.t1 | AT5G16540 | 42.054 | 409 | 163 | 14 | 1 | 390 | 1 | 354 | 2.15e-90 | 278 |
MS.gene20707.t1 | AT5G16540 | 37.107 | 159 | 78 | 6 | 263 | 412 | 63 | 208 | 2.17e-20 | 92.4 |
MS.gene20707.t1 | AT5G16540 | 41.645 | 389 | 154 | 13 | 1 | 376 | 22 | 350 | 3.09e-84 | 263 |
MS.gene20707.t1 | AT5G16540 | 37.107 | 159 | 78 | 6 | 263 | 412 | 84 | 229 | 2.16e-20 | 92.8 |
MS.gene20707.t1 | AT5G16540 | 43.614 | 321 | 119 | 11 | 1 | 311 | 1 | 269 | 2.39e-75 | 236 |
MS.gene20707.t1 | AT5G16540 | 37.107 | 159 | 78 | 6 | 263 | 412 | 63 | 208 | 1.05e-20 | 92.0 |
MS.gene20707.t1 | AT5G16540 | 43.878 | 98 | 50 | 2 | 263 | 359 | 18 | 111 | 5.04e-17 | 81.3 |
MS.gene20707.t1 | AT1G04990 | 36.494 | 348 | 161 | 9 | 4 | 336 | 31 | 333 | 5.16e-64 | 211 |
MS.gene20707.t1 | AT1G04990 | 36.494 | 348 | 161 | 9 | 4 | 336 | 31 | 333 | 5.16e-64 | 211 |
MS.gene20707.t1 | AT1G04990 | 36.494 | 348 | 161 | 9 | 4 | 336 | 31 | 333 | 5.16e-64 | 211 |
MS.gene20707.t1 | AT3G48440 | 35.511 | 352 | 192 | 9 | 14 | 353 | 107 | 435 | 4.64e-62 | 207 |
MS.gene20707.t1 | AT3G48440 | 33.858 | 127 | 34 | 2 | 260 | 336 | 104 | 230 | 2.68e-15 | 78.2 |
MS.gene20707.t1 | AT3G48440 | 39.241 | 79 | 45 | 2 | 11 | 87 | 340 | 417 | 3.96e-11 | 65.1 |
MS.gene20707.t1 | AT2G32930 | 36.338 | 355 | 179 | 11 | 14 | 358 | 14 | 331 | 1.66e-58 | 198 |
MS.gene20707.t1 | AT2G32930 | 36.338 | 355 | 179 | 11 | 14 | 358 | 41 | 358 | 1.86e-58 | 198 |
MS.gene20707.t1 | AT1G04990 | 34.682 | 346 | 150 | 9 | 4 | 336 | 31 | 313 | 2.82e-56 | 191 |
MS.gene20707.t1 | AT1G04990 | 38.043 | 92 | 56 | 1 | 263 | 354 | 44 | 134 | 6.45e-14 | 73.6 |
MS.gene20707.t1 | AT5G63260 | 35.429 | 350 | 189 | 11 | 14 | 352 | 98 | 421 | 5.83e-54 | 186 |
MS.gene20707.t1 | AT5G63260 | 42.718 | 103 | 54 | 1 | 55 | 157 | 327 | 424 | 2.09e-18 | 87.4 |
MS.gene20707.t1 | AT5G63260 | 32.394 | 142 | 41 | 3 | 262 | 354 | 97 | 232 | 3.00e-15 | 77.8 |
MS.gene20707.t1 | AT5G63260 | 38.462 | 78 | 47 | 1 | 11 | 87 | 328 | 405 | 4.13e-12 | 68.2 |
MS.gene20707.t1 | AT2G32930 | 35.493 | 355 | 178 | 12 | 14 | 358 | 41 | 354 | 2.17e-53 | 185 |
MS.gene20707.t1 | AT3G12680 | 34.012 | 344 | 191 | 8 | 14 | 336 | 171 | 499 | 5.26e-52 | 183 |
MS.gene20707.t1 | AT3G12680 | 41.860 | 172 | 71 | 4 | 12 | 157 | 220 | 388 | 3.90e-34 | 134 |
MS.gene20707.t1 | AT3G12680 | 39.024 | 164 | 58 | 4 | 15 | 136 | 338 | 501 | 4.70e-27 | 114 |
MS.gene20707.t1 | AT3G12680 | 46.429 | 84 | 37 | 1 | 13 | 88 | 416 | 499 | 2.68e-17 | 84.7 |
MS.gene20707.t1 | AT3G12680 | 42.169 | 83 | 39 | 2 | 262 | 336 | 170 | 251 | 2.63e-13 | 72.0 |
MS.gene20707.t1 | AT5G63260 | 33.880 | 366 | 189 | 11 | 14 | 352 | 98 | 437 | 1.22e-51 | 180 |
MS.gene20707.t1 | AT5G63260 | 44.000 | 100 | 51 | 1 | 58 | 157 | 346 | 440 | 2.23e-18 | 87.4 |
MS.gene20707.t1 | AT5G63260 | 45.652 | 92 | 42 | 2 | 265 | 354 | 163 | 248 | 9.73e-18 | 85.5 |
MS.gene20707.t1 | AT5G63260 | 38.462 | 78 | 47 | 1 | 11 | 87 | 344 | 421 | 4.32e-12 | 68.2 |
MS.gene20707.t1 | AT1G04990 | 35.714 | 280 | 125 | 7 | 69 | 336 | 16 | 252 | 2.14e-44 | 157 |
MS.gene20707.t1 | AT1G04990 | 48.571 | 70 | 36 | 0 | 25 | 94 | 17 | 86 | 7.51e-18 | 84.7 |
MS.gene20707.t1 | AT1G04990 | 38.017 | 121 | 61 | 4 | 47 | 156 | 165 | 282 | 9.31e-14 | 72.4 |
MS.gene20707.t1 | AT1G04990 | 33.453 | 278 | 114 | 7 | 69 | 336 | 16 | 232 | 5.28e-37 | 137 |
MS.gene20707.t1 | AT1G04990 | 48.571 | 70 | 36 | 0 | 25 | 94 | 17 | 86 | 9.76e-18 | 84.0 |
MS.gene20707.t1 | AT1G48195 | 51.250 | 80 | 37 | 1 | 258 | 335 | 1 | 80 | 4.82e-20 | 84.7 |
MS.gene20707.t1 | AT1G48195 | 52.000 | 75 | 36 | 0 | 59 | 133 | 6 | 80 | 1.43e-18 | 80.5 |
Find 150 sgRNAs with CRISPR-Local
Find 346 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCAGGGGTTGTTCCATTTCC+TGG | 0.149575 | 1.2:+66528707 | MS.gene20707:CDS |
ATCGGTTCACCGGGTCTTTC+AGG | 0.160130 | 1.2:-66529026 | None:intergenic |
AAAACTGGAACCTGTAAATT+TGG | 0.163743 | 1.2:+66528247 | MS.gene20707:CDS |
AAAACGGGGCAGTGCAAATT+TGG | 0.196691 | 1.2:+66528479 | MS.gene20707:CDS |
AGAACTGGGGACTGTAAATT+TGG | 0.217131 | 1.2:+66529065 | MS.gene20707:CDS |
CAAGCTCCACTAAATATTTA+TGG | 0.224349 | 1.2:+66528319 | MS.gene20707:CDS |
CTTCAACATCTTCAGAATTT+CGG | 0.252360 | 1.2:+66531399 | MS.gene20707:CDS |
CAAAATGGGCACTGCAAGTT+TGG | 0.265662 | 1.2:+66531257 | MS.gene20707:CDS |
CTGGCGCGCAACCTGCTGTT+GGG | 0.306993 | 1.2:+66528883 | MS.gene20707:CDS |
ACAAGACGCGCCAAATTTAC+AGG | 0.307599 | 1.2:-66528257 | None:intergenic |
GAAGAGGGCAGAGGAGTATA+AGG | 0.330274 | 1.2:-66528963 | None:intergenic |
TCCTGAAGTGTGTTTCCTCC+AGG | 0.341736 | 1.2:-66528993 | None:intergenic |
GGAGATAACACAGGGCTTAC+AGG | 0.346214 | 1.2:-66528861 | None:intergenic |
TCCTGGATGGAGTCCTTATT+CGG | 0.346285 | 1.2:+66528724 | MS.gene20707:CDS |
CTGCCCTCTTCTCCTGGCCC+TGG | 0.347929 | 1.2:+66528975 | MS.gene20707:CDS |
GTTGGGGCTACTTCTCTTTA+CGG | 0.355067 | 1.2:+66528900 | MS.gene20707:CDS |
TGCTCCTATTATTTGAAAAC+GGG | 0.359605 | 1.2:+66528464 | MS.gene20707:CDS |
CATTCTGGCTGAAAAGGAAT+TGG | 0.360799 | 1.2:-66531441 | None:intergenic |
CATTCATCTGGAAATGGTTC+TGG | 0.366848 | 1.2:+66531464 | MS.gene20707:CDS |
TCATATGTACAAGGGGCTTA+TGG | 0.368244 | 1.2:+66528668 | MS.gene20707:CDS |
CCAACAGCAGGTTGCGCGCC+AGG | 0.368459 | 1.2:-66528882 | None:intergenic |
CGACCACTTCTTAGTCCCTT+TGG | 0.371098 | 1.2:+66529131 | MS.gene20707:CDS |
TGCCAATACTATATGAGAAC+TGG | 0.372411 | 1.2:+66529050 | MS.gene20707:CDS |
TATGTGTCTCTTACCGAATA+AGG | 0.372520 | 1.2:-66528737 | None:intergenic |
ACTCCTCTGCCCTCTTCTCC+TGG | 0.392892 | 1.2:+66528969 | MS.gene20707:CDS |
GGAGGTTCGCCAAGCCTCTC+CGG | 0.397154 | 1.2:-66528100 | None:intergenic |
AGAGTCGAACCGGTCGTAAT+GGG | 0.398417 | 1.2:-66528345 | None:intergenic |
TGTGCTTATTATATGAGAAC+CGG | 0.398738 | 1.2:+66527575 | MS.gene20707:CDS |
TTGGATCCTGACTTCAGTTC+AGG | 0.402122 | 1.2:-66531422 | None:intergenic |
CCTGGCGCGCAACCTGCTGT+TGG | 0.402151 | 1.2:+66528882 | MS.gene20707:CDS |
AAGAGTCGAACCGGTCGTAA+TGG | 0.402365 | 1.2:-66528346 | None:intergenic |
TCAGCCAGAATGCATTCATC+TGG | 0.404570 | 1.2:+66531452 | MS.gene20707:CDS |
AGCCCCTTGTACATATGAAC+CGG | 0.406272 | 1.2:-66528663 | None:intergenic |
TAAGGACTCCATCCAGGAAA+TGG | 0.406810 | 1.2:-66528719 | None:intergenic |
TGAATGCATTCTGGCTGAAA+AGG | 0.407290 | 1.2:-66531447 | None:intergenic |
GGTGGGTCTGTCTCACTGTC+TGG | 0.408100 | 1.2:+66531515 | MS.gene20707:CDS |
GTGCTCCTATTATTTGAAAA+CGG | 0.410929 | 1.2:+66528463 | MS.gene20707:CDS |
CATAAATATTTAGTGGAGCT+TGG | 0.417854 | 1.2:-66528318 | None:intergenic |
CCTCCTCTGCCGGAACAGTT+TGG | 0.418933 | 1.2:+66528596 | MS.gene20707:CDS |
TTCGGTACACCATGTCTCTC+CGG | 0.421325 | 1.2:-66527551 | None:intergenic |
CCAACTGGGTATGGAGCAAC+TGG | 0.428649 | 1.2:-66531353 | None:intergenic |
GGTCCCGTGCTTCTTTCCCC+AGG | 0.436024 | 1.2:+66528689 | MS.gene20707:CDS |
CCCTGGAGGAAACACACTTC+AGG | 0.438306 | 1.2:+66528992 | MS.gene20707:CDS |
ATTTCCAGATGAATGCATTC+TGG | 0.440875 | 1.2:-66531456 | None:intergenic |
GCTGCTGCAGTAAGAGCTAC+AGG | 0.442302 | 1.2:+66528070 | MS.gene20707:CDS |
CAGTTGCTCCATACCCAGTT+GGG | 0.446844 | 1.2:+66531354 | MS.gene20707:CDS |
AATGGTTCTGGTACCTCTGT+TGG | 0.448422 | 1.2:+66531476 | MS.gene20707:CDS |
CATTTATCACTTGGTGGTGG+TGG | 0.458400 | 1.2:+66527515 | MS.gene20707:CDS |
CTCATATAATAAGCACAATT+CGG | 0.458439 | 1.2:-66527569 | None:intergenic |
CCTGAAGTGTGTTTCCTCCA+GGG | 0.458829 | 1.2:-66528992 | None:intergenic |
AGTAAAGACCCAACTGGGTA+TGG | 0.465151 | 1.2:-66531362 | None:intergenic |
GGGTTGTTCCATTTCCTGGA+TGG | 0.465512 | 1.2:+66528711 | MS.gene20707:CDS |
GAAGCTCCTCCAAACTGTTC+CGG | 0.468963 | 1.2:-66528605 | None:intergenic |
CTTTGGTCTTCCTCTACGCC+CGG | 0.470273 | 1.2:+66529148 | MS.gene20707:CDS |
GTCCCGTGCTTCTTTCCCCA+GGG | 0.477072 | 1.2:+66528690 | MS.gene20707:CDS |
CCAGTTGCTCCATACCCAGT+TGG | 0.481757 | 1.2:+66531353 | MS.gene20707:CDS |
AGAATGCATTCATCTGGAAA+TGG | 0.482468 | 1.2:+66531458 | MS.gene20707:CDS |
TCCTCCAGGGCCAGGAGAAG+AGG | 0.485909 | 1.2:-66528979 | None:intergenic |
CCAGGAAATGGAACAACCCC+TGG | 0.488180 | 1.2:-66528707 | None:intergenic |
GCTTGGCGAACCTCCATGTC+AGG | 0.489422 | 1.2:+66528108 | MS.gene20707:CDS |
CCCCAGTTCTCATATAGTAT+TGG | 0.489917 | 1.2:-66529052 | None:intergenic |
CTGAAGATGTTGAAGGAACC+AGG | 0.490486 | 1.2:-66531391 | None:intergenic |
GTAAGCCCTGTGTTATCTCC+TGG | 0.490761 | 1.2:+66528864 | MS.gene20707:CDS |
CCCTCTTCTCCTGGCCCTGG+AGG | 0.494580 | 1.2:+66528978 | MS.gene20707:CDS |
CTCATATAGTATTGGCAGAT+CGG | 0.495640 | 1.2:-66529044 | None:intergenic |
GGGTATCCATAAATATTTAG+TGG | 0.496866 | 1.2:-66528325 | None:intergenic |
TTAGATAGTAAAGACCCAAC+TGG | 0.497066 | 1.2:-66531368 | None:intergenic |
ACCCCTGGGGAAAGAAGCAC+GGG | 0.497178 | 1.2:-66528692 | None:intergenic |
CCTCTGCCGGAACAGTTTGG+AGG | 0.503926 | 1.2:+66528599 | MS.gene20707:CDS |
TGCAAGTTTGATCATCCTGC+GGG | 0.504011 | 1.2:+66531287 | MS.gene20707:CDS |
CCTCCAAACTGTTCCGGCAG+AGG | 0.504937 | 1.2:-66528599 | None:intergenic |
TGGGTCTTTACTATCTAACC+TGG | 0.505387 | 1.2:+66531373 | MS.gene20707:CDS |
GGGGACTACCCGGAGAGGCT+TGG | 0.507506 | 1.2:+66528091 | MS.gene20707:CDS |
AGTGTGTTTCCTCCAGGGCC+AGG | 0.516627 | 1.2:-66528987 | None:intergenic |
TTTCGGCCTGAACTGAAGTC+AGG | 0.521259 | 1.2:+66531416 | MS.gene20707:CDS |
CAGAGTTCTGCTTCTTTGAA+CGG | 0.524210 | 1.2:+66531554 | MS.gene20707:CDS |
CGAAATTCTGAAGATGTTGA+AGG | 0.524251 | 1.2:-66531398 | None:intergenic |
ACCGAATAAGGACTCCATCC+AGG | 0.527011 | 1.2:-66528725 | None:intergenic |
CCTCCAGGGCCAGGAGAAGA+GGG | 0.528497 | 1.2:-66528978 | None:intergenic |
GTATTGGCAGATCGGTTCAC+CGG | 0.528986 | 1.2:-66529036 | None:intergenic |
GGGCCAGGAGAAGAGGGCAG+AGG | 0.530606 | 1.2:-66528972 | None:intergenic |
GATCACGCGGGTGATTGAAA+CGG | 0.536117 | 1.2:-66527622 | None:intergenic |
GAGGTTCGCCAAGCCTCTCC+GGG | 0.539007 | 1.2:-66528099 | None:intergenic |
TCCAACGGTTCCTCCTCTGC+CGG | 0.542744 | 1.2:+66528586 | MS.gene20707:CDS |
TTCCACCATCCTCAACCTGC+TGG | 0.542831 | 1.2:+66528515 | MS.gene20707:CDS |
AGAGAAGTAGCCCCAACAGC+AGG | 0.544267 | 1.2:-66528894 | None:intergenic |
ATATCATCATCCACGGGACC+AGG | 0.545094 | 1.2:+66529100 | MS.gene20707:CDS |
ATGTGGCATTTATCACTTGG+TGG | 0.548863 | 1.2:+66527509 | MS.gene20707:CDS |
TCGGTACACCATGTCTCTCC+GGG | 0.549964 | 1.2:-66527550 | None:intergenic |
TCCGGCAGAGGAGGAACCGT+TGG | 0.550152 | 1.2:-66528587 | None:intergenic |
AATGAAGTGCCAGCAGGTTG+AGG | 0.551017 | 1.2:-66528524 | None:intergenic |
CCGTGGATGATGATATCGAC+AGG | 0.551295 | 1.2:-66529093 | None:intergenic |
CGTTCAAAGAAGCAGAACTC+TGG | 0.551424 | 1.2:-66531553 | None:intergenic |
TGCCAGCAGGTTGAGGATGG+TGG | 0.556077 | 1.2:-66528517 | None:intergenic |
TATTGGCAGATCGGTTCACC+GGG | 0.558001 | 1.2:-66529035 | None:intergenic |
TCGATGTGGCATTTATCACT+TGG | 0.559752 | 1.2:+66527506 | None:intergenic |
CCAAACTGTTCCGGCAGAGG+AGG | 0.560230 | 1.2:-66528596 | None:intergenic |
GCCAATACTATATGAGAACT+GGG | 0.561652 | 1.2:+66529051 | MS.gene20707:CDS |
GGGCGTAGAGGAAGACCAAA+GGG | 0.563721 | 1.2:-66529146 | None:intergenic |
TAAAATTGAGGTGCAGATGC+TGG | 0.564467 | 1.2:-66528548 | None:intergenic |
AACCCCTGGGGAAAGAAGCA+CGG | 0.566411 | 1.2:-66528693 | None:intergenic |
TGGCGCGCAACCTGCTGTTG+GGG | 0.568122 | 1.2:+66528884 | MS.gene20707:CDS |
GAAGTGGTCGTGCAGCAACC+TGG | 0.569368 | 1.2:-66529118 | None:intergenic |
GCTAGACCTCCTGTGTTACC+CGG | 0.569379 | 1.2:+66528644 | MS.gene20707:CDS |
CAGGAAATGGAACAACCCCT+GGG | 0.572341 | 1.2:-66528706 | None:intergenic |
AGCTTCTGCAAGTGTGAGAG+TGG | 0.577326 | 1.2:+66528622 | MS.gene20707:CDS |
TGGCATTTATCACTTGGTGG+TGG | 0.580267 | 1.2:+66527512 | MS.gene20707:CDS |
TCAACAGGTGCAGTCTCCAA+CGG | 0.580807 | 1.2:+66528571 | MS.gene20707:CDS |
CGTGCAGCAACCTGGTCCCG+TGG | 0.581143 | 1.2:-66529110 | None:intergenic |
CTGTATCTCATTGACCCCGC+AGG | 0.585745 | 1.2:-66531302 | None:intergenic |
GTGCTTATTATATGAGAACC+GGG | 0.587111 | 1.2:+66527576 | MS.gene20707:CDS |
TCAATAAGAGAAGATGCTGA+TGG | 0.590082 | 1.2:-66531326 | None:intergenic |
AAACAAAATTATACCTGACA+TGG | 0.597128 | 1.2:-66528121 | None:intergenic |
TTACCCGGTTCATATGTACA+AGG | 0.598382 | 1.2:+66528659 | MS.gene20707:CDS |
ACCATTCATACCGGGCGTAG+AGG | 0.599219 | 1.2:-66529158 | None:intergenic |
TTATGGATACCCATTACGAC+CGG | 0.600721 | 1.2:+66528336 | MS.gene20707:CDS |
AAGAGCTACAGGGGACTACC+CGG | 0.601311 | 1.2:+66528081 | MS.gene20707:CDS |
CTGCTGCAGTAAGAGCTACA+GGG | 0.603414 | 1.2:+66528071 | MS.gene20707:CDS |
GAATCTTACCCGGAGAGACA+TGG | 0.604072 | 1.2:+66527542 | MS.gene20707:CDS |
CCTGTCGATATCATCATCCA+CGG | 0.616717 | 1.2:+66529093 | MS.gene20707:CDS |
ACCCGGTTCATATGTACAAG+GGG | 0.619952 | 1.2:+66528661 | MS.gene20707:CDS |
TGCGCGCCAGGAGATAACAC+AGG | 0.621580 | 1.2:-66528870 | None:intergenic |
GCTGGCAATGAAGTGCCAGC+AGG | 0.622750 | 1.2:-66528530 | None:intergenic |
TCCACCATATCCACAAAACC+CGG | 0.626060 | 1.2:-66527594 | None:intergenic |
TAGATAGTAAAGACCCAACT+GGG | 0.626186 | 1.2:-66531367 | None:intergenic |
CTGTCGATATCATCATCCAC+GGG | 0.629057 | 1.2:+66529094 | MS.gene20707:CDS |
TCCCGTGCTTCTTTCCCCAG+GGG | 0.630198 | 1.2:+66528691 | MS.gene20707:CDS |
TGCACCTGTTGATAAAATTG+AGG | 0.642079 | 1.2:-66528560 | None:intergenic |
GCCCCTTGTACATATGAACC+GGG | 0.643721 | 1.2:-66528662 | None:intergenic |
TGGTGGTGTTGAATCTTACC+CGG | 0.644232 | 1.2:+66527532 | MS.gene20707:CDS |
AGCAGAAGCAGCAGACAGAG+TGG | 0.645532 | 1.2:+66531578 | MS.gene20707:CDS |
ACATATGAACCGGGTAACAC+AGG | 0.645643 | 1.2:-66528653 | None:intergenic |
ATTACCGCAGCACGATCACG+CGG | 0.645892 | 1.2:-66527635 | None:intergenic |
ATGCAAGTTTGATCATCCTG+CGG | 0.650257 | 1.2:+66531286 | MS.gene20707:CDS |
AGACCAAAGGGACTAAGAAG+TGG | 0.653237 | 1.2:-66529134 | None:intergenic |
AAGTGCCAGCAGGTTGAGGA+TGG | 0.654749 | 1.2:-66528520 | None:intergenic |
CAAAATTATACCTGACATGG+AGG | 0.657604 | 1.2:-66528118 | None:intergenic |
TACCCGGTTCATATGTACAA+GGG | 0.670537 | 1.2:+66528660 | MS.gene20707:CDS |
GCTCCTATTATTTGAAAACG+GGG | 0.671672 | 1.2:+66528465 | MS.gene20707:CDS |
CGGGCGTAGAGGAAGACCAA+AGG | 0.672188 | 1.2:-66529147 | None:intergenic |
TCACCCGCGTGATCGTGCTG+CGG | 0.674265 | 1.2:+66527631 | MS.gene20707:CDS |
AAAGTATTTCCTGAAAGACC+CGG | 0.677421 | 1.2:+66529017 | MS.gene20707:CDS |
GCGCGCCAGGAGATAACACA+GGG | 0.680593 | 1.2:-66528869 | None:intergenic |
CTACAGGGGACTACCCGGAG+AGG | 0.687189 | 1.2:+66528086 | MS.gene20707:CDS |
TGCTGCAGTAAGAGCTACAG+GGG | 0.695738 | 1.2:+66528072 | MS.gene20707:CDS |
TATGAACCGGGTAACACAGG+AGG | 0.706559 | 1.2:-66528650 | None:intergenic |
AGGAAATGGAACAACCCCTG+GGG | 0.738169 | 1.2:-66528705 | None:intergenic |
CCAATACTATATGAGAACTG+GGG | 0.738213 | 1.2:+66529052 | MS.gene20707:CDS |
TTACCGCAGCACGATCACGC+GGG | 0.739210 | 1.2:-66527634 | None:intergenic |
GCAAGTTTGATCATCCTGCG+GGG | 0.750469 | 1.2:+66531288 | MS.gene20707:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAATAAAATGAATGTTA+AGG | - | chr1.2:66529504-66529523 | None:intergenic | 10.0% |
!! | AAATTGTTAAATTCAATTAA+AGG | + | chr1.2:66527772-66527791 | MS.gene20707:intron | 10.0% |
!! | ATATTATTTACACATTTATA+TGG | - | chr1.2:66529276-66529295 | None:intergenic | 10.0% |
!! | TTAATTGAATTTAACAATTT+AGG | - | chr1.2:66527772-66527791 | None:intergenic | 10.0% |
!!! | CATTATTTGTATATTTTTTA+TGG | + | chr1.2:66530203-66530222 | MS.gene20707:intron | 10.0% |
!!! | CATTTTTTTCAATTTTTTAT+CGG | + | chr1.2:66527835-66527854 | MS.gene20707:intron | 10.0% |
!! | AAATAAACACATTAATAGTT+GGG | - | chr1.2:66529630-66529649 | None:intergenic | 15.0% |
!! | AAATAATATGTATTCTATTC+AGG | + | chr1.2:66529287-66529306 | MS.gene20707:intron | 15.0% |
!!! | AATTTATTTTCTAGAAAACA+GGG | + | chr1.2:66531209-66531228 | MS.gene20707:intron | 15.0% |
!!! | ATTCAGACATTTATTTTAAT+CGG | - | chr1.2:66531150-66531169 | None:intergenic | 15.0% |
!!! | GTTCATTTTATATACAAAAT+GGG | + | chr1.2:66531243-66531262 | MS.gene20707:CDS | 15.0% |
!!! | TAATTTATTTTCTAGAAAAC+AGG | + | chr1.2:66531208-66531227 | MS.gene20707:intron | 15.0% |
!!! | TGTTCATTTTATATACAAAA+TGG | + | chr1.2:66531242-66531261 | MS.gene20707:CDS | 15.0% |
!!! | TTTTGTATATAAAATGAACA+AGG | - | chr1.2:66531242-66531261 | None:intergenic | 15.0% |
!! | AATTCTCTGTAAATTACATA+AGG | - | chr1.2:66528389-66528408 | None:intergenic | 20.0% |
!! | CAAATAAACACATTAATAGT+TGG | - | chr1.2:66529631-66529650 | None:intergenic | 20.0% |
!! | CAACTATTAATGTGTTTATT+TGG | + | chr1.2:66529629-66529648 | MS.gene20707:intron | 20.0% |
!! | GAACAGTATTATTTAAAAAC+TGG | + | chr1.2:66528232-66528251 | MS.gene20707:intron | 20.0% |
!! | TAAAAGGGTTATACTAATTA+CGG | + | chr1.2:66528197-66528216 | MS.gene20707:intron | 20.0% |
!! | TAATATCACGTTCATTAAAA+AGG | - | chr1.2:66530575-66530594 | None:intergenic | 20.0% |
!! | TTAACTATCAATTCTGAATT+AGG | - | chr1.2:66530724-66530743 | None:intergenic | 20.0% |
!!! | ATTACTTCGTAAGTAAATTT+TGG | + | chr1.2:66530915-66530934 | MS.gene20707:intron | 20.0% |
!!! | CAAATCTCCTTTTAAAAAAA+GGG | + | chr1.2:66529350-66529369 | MS.gene20707:intron | 20.0% |
!!! | TAATCTAAAGCTACTTAATA+TGG | - | chr1.2:66531066-66531085 | None:intergenic | 20.0% |
!!! | TATATATGTGATCTGAAATA+TGG | + | chr1.2:66528766-66528785 | MS.gene20707:intron | 20.0% |
!!! | TTTACAGAGAATTTTTCATA+TGG | + | chr1.2:66528396-66528415 | MS.gene20707:intron | 20.0% |
! | AAAAGGGTTATACTAATTAC+GGG | + | chr1.2:66528198-66528217 | MS.gene20707:intron | 25.0% |
! | AAACAAAATTATACCTGACA+TGG | - | chr1.2:66528124-66528143 | None:intergenic | 25.0% |
! | ATATGGTTAAACTTAAACCA+TGG | + | chr1.2:66528413-66528432 | MS.gene20707:intron | 25.0% |
! | ATCAGTACTTCTTATAGTTT+AGG | + | chr1.2:66529324-66529343 | MS.gene20707:intron | 25.0% |
! | CCTATATTAGTAAGGAAAAA+AGG | + | chr1.2:66527952-66527971 | MS.gene20707:intron | 25.0% |
! | CTCATATAATAAGCACAATT+CGG | - | chr1.2:66527572-66527591 | None:intergenic | 25.0% |
! | CTTAAAAACCATGTTATCAA+GGG | - | chr1.2:66529547-66529566 | None:intergenic | 25.0% |
! | TACATCACTACATTGAAATT+TGG | - | chr1.2:66530766-66530785 | None:intergenic | 25.0% |
! | TAGAGTTAGTTAAATCTTAG+CGG | + | chr1.2:66530166-66530185 | MS.gene20707:intron | 25.0% |
! | TCTTAAAAACCATGTTATCA+AGG | - | chr1.2:66529548-66529567 | None:intergenic | 25.0% |
! | TGCATAAACCTATATTAGTA+AGG | + | chr1.2:66527944-66527963 | MS.gene20707:intron | 25.0% |
!! | GTCTGTTTATTCTGAAAAAT+GGG | + | chr1.2:66530387-66530406 | MS.gene20707:intron | 25.0% |
!! | TCTGTTTATTCTGAAAAATG+GGG | + | chr1.2:66530388-66530407 | MS.gene20707:intron | 25.0% |
!! | TGATGATTTTAAATTAGTGC+AGG | + | chr1.2:66528836-66528855 | MS.gene20707:intron | 25.0% |
!! | TGTCTGTTTATTCTGAAAAA+TGG | + | chr1.2:66530386-66530405 | MS.gene20707:intron | 25.0% |
!!! | CCAAATCTCCTTTTAAAAAA+AGG | + | chr1.2:66529349-66529368 | MS.gene20707:intron | 25.0% |
!!! | CCTTTTTTCCTTACTAATAT+AGG | - | chr1.2:66527955-66527974 | None:intergenic | 25.0% |
!!! | CCTTTTTTTAAAAGGAGATT+TGG | - | chr1.2:66529352-66529371 | None:intergenic | 25.0% |
!!! | TAAACTATAAGAAGTACTGA+TGG | - | chr1.2:66529325-66529344 | None:intergenic | 25.0% |
!!! | TAATTTGTGTGCATTCTTTT+GGG | + | chr1.2:66531172-66531191 | MS.gene20707:intron | 25.0% |
!!! | TTAATTTGTGTGCATTCTTT+TGG | + | chr1.2:66531171-66531190 | MS.gene20707:intron | 25.0% |
!!! | TTTGGTTCCCTTTTTTTAAA+AGG | - | chr1.2:66529360-66529379 | None:intergenic | 25.0% |
AAAACTGGAACCTGTAAATT+TGG | + | chr1.2:66528247-66528266 | MS.gene20707:CDS | 30.0% | |
AAAGAATGGAAACTACGATA+CGG | - | chr1.2:66530812-66530831 | None:intergenic | 30.0% | |
AAATGAAAGCGGAATAGATA+TGG | - | chr1.2:66529810-66529829 | None:intergenic | 30.0% | |
AAGCACAACTTAAGAAAGAA+TGG | - | chr1.2:66530826-66530845 | None:intergenic | 30.0% | |
AAGGAAATAGATTGAATAGC+AGG | - | chr1.2:66530556-66530575 | None:intergenic | 30.0% | |
AATGAAAGCGGAATAGATAT+GGG | - | chr1.2:66529809-66529828 | None:intergenic | 30.0% | |
AATGCAGATAACTAAAAACG+AGG | - | chr1.2:66527668-66527687 | None:intergenic | 30.0% | |
AATTGAGATACCATTCATAC+CGG | - | chr1.2:66529170-66529189 | None:intergenic | 30.0% | |
AGGAATAAAATTAACCATCC+AGG | - | chr1.2:66527752-66527771 | None:intergenic | 30.0% | |
CAAGCTCCACTAAATATTTA+TGG | + | chr1.2:66528319-66528338 | MS.gene20707:CDS | 30.0% | |
CATAAATATTTAGTGGAGCT+TGG | - | chr1.2:66528321-66528340 | None:intergenic | 30.0% | |
CTCAGAATATCAAATGAAAG+CGG | - | chr1.2:66529821-66529840 | None:intergenic | 30.0% | |
CTTCAACATCTTCAGAATTT+CGG | + | chr1.2:66531399-66531418 | MS.gene20707:CDS | 30.0% | |
GGGTATCCATAAATATTTAG+TGG | - | chr1.2:66528328-66528347 | None:intergenic | 30.0% | |
GTATGAATGGTATCTCAATT+TGG | + | chr1.2:66529170-66529189 | MS.gene20707:intron | 30.0% | |
GTGCTCCTATTATTTGAAAA+CGG | + | chr1.2:66528463-66528482 | MS.gene20707:CDS | 30.0% | |
GTTCTTCAATTTATGAGACT+AGG | - | chr1.2:66529766-66529785 | None:intergenic | 30.0% | |
GTTGTAATTCATGAAAGACA+TGG | - | chr1.2:66530109-66530128 | None:intergenic | 30.0% | |
GTTTAGACTAACAACAGATT+TGG | - | chr1.2:66529378-66529397 | None:intergenic | 30.0% | |
TCATACGCATCATAAATGAA+AGG | - | chr1.2:66531116-66531135 | None:intergenic | 30.0% | |
TGCTCCTATTATTTGAAAAC+GGG | + | chr1.2:66528464-66528483 | MS.gene20707:CDS | 30.0% | |
TGTGCTTATTATATGAGAAC+CGG | + | chr1.2:66527575-66527594 | MS.gene20707:CDS | 30.0% | |
TTCTAAGTGTCTGTAAAACA+AGG | + | chr1.2:66530604-66530623 | MS.gene20707:intron | 30.0% | |
TTTGAATGCTTCTTTATCTC+AGG | + | chr1.2:66530679-66530698 | MS.gene20707:intron | 30.0% | |
! | AACTGACTCAAATATTGTTC+AGG | + | chr1.2:66528045-66528064 | MS.gene20707:intron | 30.0% |
! | AAGTGATGTACATTTGCTAA+GGG | + | chr1.2:66528009-66528028 | MS.gene20707:intron | 30.0% |
! | AATTAGGTTTTGCTAACCTT+GGG | - | chr1.2:66530708-66530727 | None:intergenic | 30.0% |
! | ATATGTGATCTGAAATATGG+CGG | + | chr1.2:66528769-66528788 | MS.gene20707:intron | 30.0% |
! | CAGTGATATACATTTGCTAA+GGG | + | chr1.2:66527869-66527888 | MS.gene20707:intron | 30.0% |
! | CTGTTTATTCTGAAAAATGG+GGG | + | chr1.2:66530389-66530408 | MS.gene20707:intron | 30.0% |
! | TAAGTGATGTACATTTGCTA+AGG | + | chr1.2:66528008-66528027 | MS.gene20707:intron | 30.0% |
! | TCAGTGATATACATTTGCTA+AGG | + | chr1.2:66527868-66527887 | MS.gene20707:intron | 30.0% |
! | TTTGGAGTTGTAAACTGAAA+AGG | - | chr1.2:66530748-66530767 | None:intergenic | 30.0% |
!! | CATGGATTTTGTTTAACACA+GGG | + | chr1.2:66528431-66528450 | MS.gene20707:intron | 30.0% |
!!! | CTTGTGACTTTGTTTTAAGA+TGG | + | chr1.2:66529935-66529954 | MS.gene20707:intron | 30.0% |
!!! | TCGTAAGTAAATTTTGGTTG+CGG | + | chr1.2:66530921-66530940 | MS.gene20707:intron | 30.0% |
AAATTCCACCATCCCAAAAA+TGG | + | chr1.2:66528280-66528299 | MS.gene20707:CDS | 35.0% | |
AAGAAAAAGAAGAGTCGAAC+CGG | - | chr1.2:66528358-66528377 | None:intergenic | 35.0% | |
AAGATTGTGATATTCCTCGT+AGG | + | chr1.2:66529564-66529583 | MS.gene20707:intron | 35.0% | |
ACAAAGCAAAGAAAACAGTG+TGG | - | chr1.2:66530038-66530057 | None:intergenic | 35.0% | |
AGAATGCATTCATCTGGAAA+TGG | + | chr1.2:66531458-66531477 | MS.gene20707:CDS | 35.0% | |
AGCTAAGAAAAAGATTGGAG+GGG | - | chr1.2:66529857-66529876 | None:intergenic | 35.0% | |
AGCTTGTGAGTATCTTATGT+GGG | + | chr1.2:66530649-66530668 | MS.gene20707:intron | 35.0% | |
ATGAAAGCGGAATAGATATG+GGG | - | chr1.2:66529808-66529827 | None:intergenic | 35.0% | |
ATGTATTCTATTCAGGAGTC+AGG | + | chr1.2:66529294-66529313 | MS.gene20707:intron | 35.0% | |
ATTCCTTGATGGAACATGAT+TGG | + | chr1.2:66530307-66530326 | MS.gene20707:intron | 35.0% | |
ATTGAGATACCATTCATACC+GGG | - | chr1.2:66529169-66529188 | None:intergenic | 35.0% | |
ATTGGATGAATGCACATGAT+TGG | + | chr1.2:66530498-66530517 | MS.gene20707:intron | 35.0% | |
ATTTCCAGATGAATGCATTC+TGG | - | chr1.2:66531459-66531478 | None:intergenic | 35.0% | |
CAAAATTATACCTGACATGG+AGG | - | chr1.2:66528121-66528140 | None:intergenic | 35.0% | |
CAAAGCAAAGAAAACAGTGT+GGG | - | chr1.2:66530037-66530056 | None:intergenic | 35.0% | |
CATTTCAGTGGCAATCTATT+AGG | - | chr1.2:66529708-66529727 | None:intergenic | 35.0% | |
CCAATACTATATGAGAACTG+GGG | + | chr1.2:66529052-66529071 | MS.gene20707:CDS | 35.0% | |
CCTGTGTTAAACAAAATCCA+TGG | - | chr1.2:66528433-66528452 | None:intergenic | 35.0% | |
CTAATAGATTGCCACTGAAA+TGG | + | chr1.2:66529706-66529725 | MS.gene20707:intron | 35.0% | |
GAGCTAAGAAAAAGATTGGA+GGG | - | chr1.2:66529858-66529877 | None:intergenic | 35.0% | |
GATGGAGCTAAGAAAAAGAT+TGG | - | chr1.2:66529862-66529881 | None:intergenic | 35.0% | |
GCCAATACTATATGAGAACT+GGG | + | chr1.2:66529051-66529070 | MS.gene20707:CDS | 35.0% | |
GCTCCTATTATTTGAAAACG+GGG | + | chr1.2:66528465-66528484 | MS.gene20707:CDS | 35.0% | |
GGATACATGGATCAAACTTA+TGG | + | chr1.2:66530410-66530429 | MS.gene20707:intron | 35.0% | |
GGATCAAACTTATGGTTACT+TGG | + | chr1.2:66530418-66530437 | MS.gene20707:intron | 35.0% | |
GTGCTTATTATATGAGAACC+GGG | + | chr1.2:66527576-66527595 | MS.gene20707:CDS | 35.0% | |
TAGATAGTAAAGACCCAACT+GGG | - | chr1.2:66531370-66531389 | None:intergenic | 35.0% | |
TATGTGTCTCTTACCGAATA+AGG | - | chr1.2:66528740-66528759 | None:intergenic | 35.0% | |
TCAAAATTGAGATCCTTCCT+AGG | - | chr1.2:66530275-66530294 | None:intergenic | 35.0% | |
TCAATAAGAGAAGATGCTGA+TGG | - | chr1.2:66531329-66531348 | None:intergenic | 35.0% | |
TCATCCAATAACTTGAGCTT+AGG | - | chr1.2:66530487-66530506 | None:intergenic | 35.0% | |
TGCCAATACTATATGAGAAC+TGG | + | chr1.2:66529050-66529069 | MS.gene20707:CDS | 35.0% | |
TTAGATAGTAAAGACCCAAC+TGG | - | chr1.2:66531371-66531390 | None:intergenic | 35.0% | |
! | AAAGTATTTCCTGAAAGACC+CGG | + | chr1.2:66529017-66529036 | MS.gene20707:CDS | 35.0% |
! | CGAAATTCTGAAGATGTTGA+AGG | - | chr1.2:66531401-66531420 | None:intergenic | 35.0% |
! | GAATTAGGTTTTGCTAACCT+TGG | - | chr1.2:66530709-66530728 | None:intergenic | 35.0% |
! | TAAATATCCCCCTCCATTTT+TGG | - | chr1.2:66528296-66528315 | None:intergenic | 35.0% |
! | TAGCTTGTGAGTATCTTATG+TGG | + | chr1.2:66530648-66530667 | MS.gene20707:intron | 35.0% |
! | TGCACCTCAATTTTATCAAC+AGG | + | chr1.2:66528556-66528575 | MS.gene20707:CDS | 35.0% |
! | TGCACCTGTTGATAAAATTG+AGG | - | chr1.2:66528563-66528582 | None:intergenic | 35.0% |
! | TTCTTAAGTTGTGCTTTGCT+TGG | + | chr1.2:66530830-66530849 | MS.gene20707:intron | 35.0% |
! | TTTTCTTAGCTCCATCATGT+CGG | + | chr1.2:66529866-66529885 | MS.gene20707:intron | 35.0% |
! | TTTTTGCAAAACTGCAGAGT+TGG | + | chr1.2:66529521-66529540 | MS.gene20707:intron | 35.0% |
!! | AAATATCCCCCTCCATTTTT+GGG | - | chr1.2:66528295-66528314 | None:intergenic | 35.0% |
!! | ATTGGCTTTCTGTATCTATC+CGG | + | chr1.2:66530325-66530344 | MS.gene20707:intron | 35.0% |
!! | CCATGGATTTTGTTTAACAC+AGG | + | chr1.2:66528430-66528449 | MS.gene20707:intron | 35.0% |
!! | CTCATATAGTATTGGCAGAT+CGG | - | chr1.2:66529047-66529066 | None:intergenic | 35.0% |
!!! | TAGTAGATGCTATTTTTGCC+TGG | + | chr1.2:66527731-66527750 | MS.gene20707:intron | 35.0% |
AACCTTGCTTGATTCCTTGA+TGG | + | chr1.2:66530296-66530315 | MS.gene20707:intron | 40.0% | |
AAGATGAAACACCCACAAAG+GGG | - | chr1.2:66529918-66529937 | None:intergenic | 40.0% | |
AAGCCAATCATGTTCCATCA+AGG | - | chr1.2:66530313-66530332 | None:intergenic | 40.0% | |
ACAAGATGAAACACCCACAA+AGG | - | chr1.2:66529920-66529939 | None:intergenic | 40.0% | |
ACCAGGTTAGTGTGTATACT+TGG | - | chr1.2:66529659-66529678 | None:intergenic | 40.0% | |
AGAACTGGGGACTGTAAATT+TGG | + | chr1.2:66529065-66529084 | MS.gene20707:CDS | 40.0% | |
AGATCCTTCCTAGGATCAAT+TGG | - | chr1.2:66530266-66530285 | None:intergenic | 40.0% | |
ATAGATTGCCACTGAAATGG+CGG | + | chr1.2:66529709-66529728 | MS.gene20707:intron | 40.0% | |
ATCAAAAGTCCCCTGTAAGA+GGG | - | chr1.2:66530960-66530979 | None:intergenic | 40.0% | |
ATCTTTGGTCAAGACCCATA+AGG | + | chr1.2:66529974-66529993 | MS.gene20707:intron | 40.0% | |
ATGCAAGTTTGATCATCCTG+CGG | + | chr1.2:66531286-66531305 | MS.gene20707:CDS | 40.0% | |
ATGGGTCTTGACCAAAGATA+CGG | - | chr1.2:66529973-66529992 | None:intergenic | 40.0% | |
ATGTGGCATTTATCACTTGG+TGG | + | chr1.2:66527509-66527528 | MS.gene20707:CDS | 40.0% | |
ATTGAAGAACCCCATCCTTA+TGG | + | chr1.2:66529776-66529795 | MS.gene20707:intron | 40.0% | |
CAAGATGAAACACCCACAAA+GGG | - | chr1.2:66529919-66529938 | None:intergenic | 40.0% | |
CAGAGTTCTGCTTCTTTGAA+CGG | + | chr1.2:66531554-66531573 | MS.gene20707:CDS | 40.0% | |
CATTCATCTGGAAATGGTTC+TGG | + | chr1.2:66531464-66531483 | MS.gene20707:CDS | 40.0% | |
CCCCAGTTCTCATATAGTAT+TGG | - | chr1.2:66529055-66529074 | None:intergenic | 40.0% | |
CTCTCCTAAGCTCAAGTTAT+TGG | + | chr1.2:66530480-66530499 | MS.gene20707:intron | 40.0% | |
GAGAAACAGGTAGTCCTTAT+GGG | - | chr1.2:66529991-66530010 | None:intergenic | 40.0% | |
GATCCTTCCTAGGATCAATT+GGG | - | chr1.2:66530265-66530284 | None:intergenic | 40.0% | |
GGAGCTAAGAAAAAGATTGG+AGG | - | chr1.2:66529859-66529878 | None:intergenic | 40.0% | |
GTATACACACTAACCTGGTT+TGG | + | chr1.2:66529660-66529679 | MS.gene20707:intron | 40.0% | |
GTGCGTACATGTATTATGTG+TGG | + | chr1.2:66529594-66529613 | MS.gene20707:intron | 40.0% | |
TAAAATTGAGGTGCAGATGC+TGG | - | chr1.2:66528551-66528570 | None:intergenic | 40.0% | |
TAACTTGAGCTTAGGAGAGT+TGG | - | chr1.2:66530479-66530498 | None:intergenic | 40.0% | |
TAAGTTGTGCTTTGCTTGGT+TGG | + | chr1.2:66530834-66530853 | MS.gene20707:intron | 40.0% | |
TACCCGGTTCATATGTACAA+GGG | + | chr1.2:66528660-66528679 | MS.gene20707:CDS | 40.0% | |
TCATATGTACAAGGGGCTTA+TGG | + | chr1.2:66528668-66528687 | MS.gene20707:CDS | 40.0% | |
TCTGAAAAATGGGGGATACA+TGG | + | chr1.2:66530397-66530416 | MS.gene20707:intron | 40.0% | |
TCTTTATCTCAGGAAACCCA+AGG | + | chr1.2:66530689-66530708 | MS.gene20707:intron | 40.0% | |
TGAACTCAACACCGTATCTT+TGG | + | chr1.2:66529959-66529978 | MS.gene20707:intron | 40.0% | |
TGAGAAACAGGTAGTCCTTA+TGG | - | chr1.2:66529992-66530011 | None:intergenic | 40.0% | |
TGGGTCTTTACTATCTAACC+TGG | + | chr1.2:66531373-66531392 | MS.gene20707:CDS | 40.0% | |
TTACCCGGTTCATATGTACA+AGG | + | chr1.2:66528659-66528678 | MS.gene20707:CDS | 40.0% | |
TTATGGATACCCATTACGAC+CGG | + | chr1.2:66528336-66528355 | MS.gene20707:CDS | 40.0% | |
TTCCATCAAGGAATCAAGCA+AGG | - | chr1.2:66530301-66530320 | None:intergenic | 40.0% | |
TTCTCTTCCCAATTGATCCT+AGG | + | chr1.2:66530255-66530274 | MS.gene20707:intron | 40.0% | |
! | AAAGTTTTCCGCCATTTCAG+TGG | - | chr1.2:66529720-66529739 | None:intergenic | 40.0% |
! | ACTACCTGTTTCTCACTGTT+GGG | + | chr1.2:66529997-66530016 | MS.gene20707:intron | 40.0% |
! | CATTCTGGCTGAAAAGGAAT+TGG | - | chr1.2:66531444-66531463 | None:intergenic | 40.0% |
! | CTGCCCCGTTTTCAAATAAT+AGG | - | chr1.2:66528471-66528490 | None:intergenic | 40.0% |
! | TATATGAGAACCGGGTTTTG+TGG | + | chr1.2:66527584-66527603 | MS.gene20707:CDS | 40.0% |
! | TGAATGCATTCTGGCTGAAA+AGG | - | chr1.2:66531450-66531469 | None:intergenic | 40.0% |
!! | AGACCCAAGCTTTTGTTTGA+GGG | - | chr1.2:66530353-66530372 | None:intergenic | 40.0% |
!!! | AGATGCTATTTTTGCCTGGA+TGG | + | chr1.2:66527735-66527754 | MS.gene20707:intron | 40.0% |
AAAACGGGGCAGTGCAAATT+TGG | + | chr1.2:66528479-66528498 | MS.gene20707:CDS | 45.0% | |
AACAAGTTAGACACCAGGCA+GGG | - | chr1.2:66529433-66529452 | None:intergenic | 45.0% | |
ACAAGACGCGCCAAATTTAC+AGG | - | chr1.2:66528260-66528279 | None:intergenic | 45.0% | |
ACATATGAACCGGGTAACAC+AGG | - | chr1.2:66528656-66528675 | None:intergenic | 45.0% | |
ACCCGGTTCATATGTACAAG+GGG | + | chr1.2:66528661-66528680 | MS.gene20707:CDS | 45.0% | |
AGACCAAAGGGACTAAGAAG+TGG | - | chr1.2:66529137-66529156 | None:intergenic | 45.0% | |
AGCCCCTTGTACATATGAAC+CGG | - | chr1.2:66528666-66528685 | None:intergenic | 45.0% | |
AGTAAAGACCCAACTGGGTA+TGG | - | chr1.2:66531365-66531384 | None:intergenic | 45.0% | |
AGTTCCCAACAGTGAGAAAC+AGG | - | chr1.2:66530004-66530023 | None:intergenic | 45.0% | |
CATCAAAAGTCCCCTGTAAG+AGG | - | chr1.2:66530961-66530980 | None:intergenic | 45.0% | |
CCTGTCGATATCATCATCCA+CGG | + | chr1.2:66529093-66529112 | MS.gene20707:CDS | 45.0% | |
CGTTCAAAGAAGCAGAACTC+TGG | - | chr1.2:66531556-66531575 | None:intergenic | 45.0% | |
CTGAAGATGTTGAAGGAACC+AGG | - | chr1.2:66531394-66531413 | None:intergenic | 45.0% | |
CTGTCGATATCATCATCCAC+GGG | + | chr1.2:66529094-66529113 | MS.gene20707:CDS | 45.0% | |
CTTCCCAATTGATCCTAGGA+AGG | + | chr1.2:66530259-66530278 | MS.gene20707:intron | 45.0% | |
GAAGCCATGATACCATGTCA+AGG | + | chr1.2:66530452-66530471 | MS.gene20707:intron | 45.0% | |
GATATGGGGAAACAGCCATA+AGG | - | chr1.2:66529794-66529813 | None:intergenic | 45.0% | |
GCCAAGTATACACACTAACC+TGG | + | chr1.2:66529655-66529674 | MS.gene20707:intron | 45.0% | |
GCTCCCTCAAACAAAAGCTT+GGG | + | chr1.2:66530347-66530366 | MS.gene20707:intron | 45.0% | |
GGTTGAGGGGATATGAAACA+TGG | + | chr1.2:66530868-66530887 | MS.gene20707:intron | 45.0% | |
GTTGGGGCTACTTCTCTTTA+CGG | + | chr1.2:66528900-66528919 | MS.gene20707:CDS | 45.0% | |
GTTTCTCACTGTTGGGAACT+TGG | + | chr1.2:66530004-66530023 | MS.gene20707:intron | 45.0% | |
TAAGGACTCCATCCAGGAAA+TGG | - | chr1.2:66528722-66528741 | None:intergenic | 45.0% | |
TACAGCAATCTCACCAAACC+AGG | - | chr1.2:66529676-66529695 | None:intergenic | 45.0% | |
TCAAAAGTCCCCTGTAAGAG+GGG | - | chr1.2:66530959-66530978 | None:intergenic | 45.0% | |
TCAGCCAGAATGCATTCATC+TGG | + | chr1.2:66531452-66531471 | MS.gene20707:CDS | 45.0% | |
TCCACCATATCCACAAAACC+CGG | - | chr1.2:66527597-66527616 | None:intergenic | 45.0% | |
TCCACCATCCCAAAAATGGA+GGG | + | chr1.2:66528284-66528303 | MS.gene20707:CDS | 45.0% | |
TCCTGGATGGAGTCCTTATT+CGG | + | chr1.2:66528724-66528743 | MS.gene20707:CDS | 45.0% | |
TGCAAGTTTGATCATCCTGC+GGG | + | chr1.2:66531287-66531306 | MS.gene20707:CDS | 45.0% | |
TGGCTACAACAAAAGCGATG+TGG | + | chr1.2:66530888-66530907 | MS.gene20707:intron | 45.0% | |
TGGTCCTTGACATGGTATCA+TGG | - | chr1.2:66530459-66530478 | None:intergenic | 45.0% | |
TTCCACCATCCCAAAAATGG+AGG | + | chr1.2:66528283-66528302 | MS.gene20707:CDS | 45.0% | |
TTGGATCCTGACTTCAGTTC+AGG | - | chr1.2:66531425-66531444 | None:intergenic | 45.0% | |
! | AGAGTTGGCCCTTGATAACA+TGG | + | chr1.2:66529536-66529555 | MS.gene20707:intron | 45.0% |
! | CAAAATGGGCACTGCAAGTT+TGG | + | chr1.2:66531257-66531276 | MS.gene20707:CDS | 45.0% |
! | CTCTTACAGGGGACTTTTGA+TGG | + | chr1.2:66530959-66530978 | MS.gene20707:intron | 45.0% |
! | GACTACCTGTTTCTCACTGT+TGG | + | chr1.2:66529996-66530015 | MS.gene20707:intron | 45.0% |
! | GTGGTGCTAAAACTCTGCAT+TGG | + | chr1.2:66529888-66529907 | MS.gene20707:intron | 45.0% |
! | TGGCATTTATCACTTGGTGG+TGG | + | chr1.2:66527512-66527531 | MS.gene20707:CDS | 45.0% |
! | TGGTGGTGTTGAATCTTACC+CGG | + | chr1.2:66527532-66527551 | MS.gene20707:CDS | 45.0% |
! | TTTTAGCACCACCGACATGA+TGG | - | chr1.2:66529880-66529899 | None:intergenic | 45.0% |
!! | AAGCTTTTGTTTGAGGGAGC+CGG | - | chr1.2:66530347-66530366 | None:intergenic | 45.0% |
!! | AATGGTTCTGGTACCTCTGT+TGG | + | chr1.2:66531476-66531495 | MS.gene20707:CDS | 45.0% |
!! | AGAACCGGGTTTTGTGGATA+TGG | + | chr1.2:66527590-66527609 | MS.gene20707:CDS | 45.0% |
!! | ATCGTTTTTGCCCCTCTTAC+AGG | + | chr1.2:66530946-66530965 | MS.gene20707:intron | 45.0% |
!! | CAGACCCAAGCTTTTGTTTG+AGG | - | chr1.2:66530354-66530373 | None:intergenic | 45.0% |
!! | CATTTATCACTTGGTGGTGG+TGG | + | chr1.2:66527515-66527534 | MS.gene20707:CDS | 45.0% |
!! | GGTTTTGTGGATATGGTGGA+AGG | + | chr1.2:66527597-66527616 | MS.gene20707:CDS | 45.0% |
!! | TCGTTTTTGCCCCTCTTACA+GGG | + | chr1.2:66530947-66530966 | MS.gene20707:intron | 45.0% |
!! | TGGTGTCATAGCATGGTTGA+GGG | + | chr1.2:66530854-66530873 | MS.gene20707:intron | 45.0% |
!! | TGGTTTGGTGAGATTGCTGT+AGG | + | chr1.2:66529675-66529694 | MS.gene20707:intron | 45.0% |
!! | TTGGTGTCATAGCATGGTTG+AGG | + | chr1.2:66530853-66530872 | MS.gene20707:intron | 45.0% |
!! | ATATTTACTATTTAATAAAA+GGG | + | chr1.2:66528182-66528201 | MS.gene20707:intron | 5.0% |
!! | TATATTTACTATTTAATAAA+AGG | + | chr1.2:66528181-66528200 | MS.gene20707:intron | 5.0% |
AAGAGTCGAACCGGTCGTAA+TGG | - | chr1.2:66528349-66528368 | None:intergenic | 50.0% | |
AATGCAACTAAAGCCAGCGC+AGG | - | chr1.2:66529457-66529476 | None:intergenic | 50.0% | |
ACCGAATAAGGACTCCATCC+AGG | - | chr1.2:66528728-66528747 | None:intergenic | 50.0% | |
AGAGTCGAACCGGTCGTAAT+GGG | - | chr1.2:66528348-66528367 | None:intergenic | 50.0% | |
AGCTTCTGCAAGTGTGAGAG+TGG | + | chr1.2:66528622-66528641 | MS.gene20707:CDS | 50.0% | |
AGGAAATGGAACAACCCCTG+GGG | - | chr1.2:66528708-66528727 | None:intergenic | 50.0% | |
ATATCATCATCCACGGGACC+AGG | + | chr1.2:66529100-66529119 | MS.gene20707:CDS | 50.0% | |
CAACAAGTTAGACACCAGGC+AGG | - | chr1.2:66529434-66529453 | None:intergenic | 50.0% | |
CACCATCCCAAAAATGGAGG+GGG | + | chr1.2:66528286-66528305 | MS.gene20707:CDS | 50.0% | |
CAGGAAATGGAACAACCCCT+GGG | - | chr1.2:66528709-66528728 | None:intergenic | 50.0% | |
CAGGCAACAAGTTAGACACC+AGG | - | chr1.2:66529438-66529457 | None:intergenic | 50.0% | |
CAGTTGCTCCATACCCAGTT+GGG | + | chr1.2:66531354-66531373 | MS.gene20707:CDS | 50.0% | |
CCACCATCCCAAAAATGGAG+GGG | + | chr1.2:66528285-66528304 | MS.gene20707:CDS | 50.0% | |
CCGTGGATGATGATATCGAC+AGG | - | chr1.2:66529096-66529115 | None:intergenic | 50.0% | |
CCTGAAGTGTGTTTCCTCCA+GGG | - | chr1.2:66528995-66529014 | None:intergenic | 50.0% | |
CGACCACTTCTTAGTCCCTT+TGG | + | chr1.2:66529131-66529150 | MS.gene20707:CDS | 50.0% | |
CTGCTGCAGTAAGAGCTACA+GGG | + | chr1.2:66528071-66528090 | MS.gene20707:CDS | 50.0% | |
GAAGCTCCTCCAAACTGTTC+CGG | - | chr1.2:66528608-66528627 | None:intergenic | 50.0% | |
GAATCTTACCCGGAGAGACA+TGG | + | chr1.2:66527542-66527561 | MS.gene20707:CDS | 50.0% | |
GATCACGCGGGTGATTGAAA+CGG | - | chr1.2:66527625-66527644 | None:intergenic | 50.0% | |
GCAAGTTTGATCATCCTGCG+GGG | + | chr1.2:66531288-66531307 | MS.gene20707:CDS | 50.0% | |
GCATTGGAGTTCCCCTTTGT+GGG | + | chr1.2:66529904-66529923 | MS.gene20707:intron | 50.0% | |
GCCCCTTGTACATATGAACC+GGG | - | chr1.2:66528665-66528684 | None:intergenic | 50.0% | |
GGAGATAACACAGGGCTTAC+AGG | - | chr1.2:66528864-66528883 | None:intergenic | 50.0% | |
GGCTCCCTCAAACAAAAGCT+TGG | + | chr1.2:66530346-66530365 | MS.gene20707:intron | 50.0% | |
GGGAAACAGCCATAAGGATG+GGG | - | chr1.2:66529788-66529807 | None:intergenic | 50.0% | |
GGGGAAACAGCCATAAGGAT+GGG | - | chr1.2:66529789-66529808 | None:intergenic | 50.0% | |
GGGTTGTTCCATTTCCTGGA+TGG | + | chr1.2:66528711-66528730 | MS.gene20707:CDS | 50.0% | |
GTAAGCCCTGTGTTATCTCC+TGG | + | chr1.2:66528864-66528883 | MS.gene20707:CDS | 50.0% | |
TACGCACGAGTAATCCTACG+AGG | - | chr1.2:66529581-66529600 | None:intergenic | 50.0% | |
TATGAACCGGGTAACACAGG+AGG | - | chr1.2:66528653-66528672 | None:intergenic | 50.0% | |
TCAACAGGTGCAGTCTCCAA+CGG | + | chr1.2:66528571-66528590 | MS.gene20707:CDS | 50.0% | |
TCCTGAAGTGTGTTTCCTCC+AGG | - | chr1.2:66528996-66529015 | None:intergenic | 50.0% | |
TCTTAGCTCCATCATGTCGG+TGG | + | chr1.2:66529869-66529888 | MS.gene20707:intron | 50.0% | |
TGCATTGGAGTTCCCCTTTG+TGG | + | chr1.2:66529903-66529922 | MS.gene20707:intron | 50.0% | |
TGCTGCAGTAAGAGCTACAG+GGG | + | chr1.2:66528072-66528091 | MS.gene20707:CDS | 50.0% | |
TGGGGAAACAGCCATAAGGA+TGG | - | chr1.2:66529790-66529809 | None:intergenic | 50.0% | |
TTAAGACCAATGTCCCTGCC+TGG | + | chr1.2:66529417-66529436 | MS.gene20707:intron | 50.0% | |
TTCGGTACACCATGTCTCTC+CGG | - | chr1.2:66527554-66527573 | None:intergenic | 50.0% | |
TTTCGGCCTGAACTGAAGTC+AGG | + | chr1.2:66531416-66531435 | MS.gene20707:CDS | 50.0% | |
! | AATGAAGTGCCAGCAGGTTG+AGG | - | chr1.2:66528527-66528546 | None:intergenic | 50.0% |
! | AGGAGAGTTGGTCCTTGACA+TGG | - | chr1.2:66530467-66530486 | None:intergenic | 50.0% |
! | CGTTTTTGCCCCTCTTACAG+GGG | + | chr1.2:66530948-66530967 | MS.gene20707:intron | 50.0% |
! | GAAGAGGGCAGAGGAGTATA+AGG | - | chr1.2:66528966-66528985 | None:intergenic | 50.0% |
! | GGTGTCATAGCATGGTTGAG+GGG | + | chr1.2:66530855-66530874 | MS.gene20707:intron | 50.0% |
! | GTATTGGCAGATCGGTTCAC+CGG | - | chr1.2:66529039-66529058 | None:intergenic | 50.0% |
! | TATTGGCAGATCGGTTCACC+GGG | - | chr1.2:66529038-66529057 | None:intergenic | 50.0% |
!! | ACCGGGTTTTGTGGATATGG+TGG | + | chr1.2:66527593-66527612 | MS.gene20707:CDS | 50.0% |
!! | ATCCCCCTCCATTTTTGGGA+TGG | - | chr1.2:66528291-66528310 | None:intergenic | 50.0% |
!! | CGCTGGCTTTAGTTGCATTG+GGG | + | chr1.2:66529458-66529477 | MS.gene20707:intron | 50.0% |
!! | GCGCTGGCTTTAGTTGCATT+GGG | + | chr1.2:66529457-66529476 | MS.gene20707:intron | 50.0% |
!! | GCTTGGTTGGTGTCATAGCA+TGG | + | chr1.2:66530847-66530866 | MS.gene20707:intron | 50.0% |
!! | TGCGCTGGCTTTAGTTGCAT+TGG | + | chr1.2:66529456-66529475 | MS.gene20707:intron | 50.0% |
AACCCCTGGGGAAAGAAGCA+CGG | - | chr1.2:66528696-66528715 | None:intergenic | 55.0% | |
AAGAGCTACAGGGGACTACC+CGG | + | chr1.2:66528081-66528100 | MS.gene20707:CDS | 55.0% | |
ACCATTCATACCGGGCGTAG+AGG | - | chr1.2:66529161-66529180 | None:intergenic | 55.0% | |
AGAGAAGTAGCCCCAACAGC+AGG | - | chr1.2:66528897-66528916 | None:intergenic | 55.0% | |
AGCAGAAGCAGCAGACAGAG+TGG | + | chr1.2:66531578-66531597 | MS.gene20707:CDS | 55.0% | |
ATTACCGCAGCACGATCACG+CGG | - | chr1.2:66527638-66527657 | None:intergenic | 55.0% | |
CCAACTGGGTATGGAGCAAC+TGG | - | chr1.2:66531356-66531375 | None:intergenic | 55.0% | |
CCAGGAAATGGAACAACCCC+TGG | - | chr1.2:66528710-66528729 | None:intergenic | 55.0% | |
CCAGGGGTTGTTCCATTTCC+TGG | + | chr1.2:66528707-66528726 | MS.gene20707:CDS | 55.0% | |
CCAGTTGCTCCATACCCAGT+TGG | + | chr1.2:66531353-66531372 | MS.gene20707:CDS | 55.0% | |
CCCTGGAGGAAACACACTTC+AGG | + | chr1.2:66528992-66529011 | MS.gene20707:CDS | 55.0% | |
CTGTATCTCATTGACCCCGC+AGG | - | chr1.2:66531305-66531324 | None:intergenic | 55.0% | |
GCTAGACCTCCTGTGTTACC+CGG | + | chr1.2:66528644-66528663 | MS.gene20707:CDS | 55.0% | |
GCTGCTGCAGTAAGAGCTAC+AGG | + | chr1.2:66528070-66528089 | MS.gene20707:CDS | 55.0% | |
GGGCGTAGAGGAAGACCAAA+GGG | - | chr1.2:66529149-66529168 | None:intergenic | 55.0% | |
TAGACACCAGGCAGGGACAT+TGG | - | chr1.2:66529426-66529445 | None:intergenic | 55.0% | |
TCCTCTACGCCCGGTATGAA+TGG | + | chr1.2:66529157-66529176 | MS.gene20707:intron | 55.0% | |
TCGGTACACCATGTCTCTCC+GGG | - | chr1.2:66527553-66527572 | None:intergenic | 55.0% | |
TTCCACCATCCTCAACCTGC+TGG | + | chr1.2:66528515-66528534 | MS.gene20707:CDS | 55.0% | |
! | AAGTGCCAGCAGGTTGAGGA+TGG | - | chr1.2:66528523-66528542 | None:intergenic | 55.0% |
! | ATCGGTTCACCGGGTCTTTC+AGG | - | chr1.2:66529029-66529048 | None:intergenic | 55.0% |
! | CTTTGGTCTTCCTCTACGCC+CGG | + | chr1.2:66529148-66529167 | MS.gene20707:CDS | 55.0% |
!! | GTCTAACTTGTTGCCTGCGC+TGG | + | chr1.2:66529441-66529460 | MS.gene20707:intron | 55.0% |
!!! | CCCCTCCATTTTTGGGATGG+TGG | - | chr1.2:66528288-66528307 | None:intergenic | 55.0% |
ACTCCTCTGCCCTCTTCTCC+TGG | + | chr1.2:66528969-66528988 | MS.gene20707:CDS | 60.0% | |
AGTGTGTTTCCTCCAGGGCC+AGG | - | chr1.2:66528990-66529009 | None:intergenic | 60.0% | |
CCAAACTGTTCCGGCAGAGG+AGG | - | chr1.2:66528599-66528618 | None:intergenic | 60.0% | |
CCTCCAAACTGTTCCGGCAG+AGG | - | chr1.2:66528602-66528621 | None:intergenic | 60.0% | |
CCTCCTCTGCCGGAACAGTT+TGG | + | chr1.2:66528596-66528615 | MS.gene20707:CDS | 60.0% | |
CCTCTGCCGGAACAGTTTGG+AGG | + | chr1.2:66528599-66528618 | MS.gene20707:CDS | 60.0% | |
CGGGCGTAGAGGAAGACCAA+AGG | - | chr1.2:66529150-66529169 | None:intergenic | 60.0% | |
GAAGTGGTCGTGCAGCAACC+TGG | - | chr1.2:66529121-66529140 | None:intergenic | 60.0% | |
GCGCGCCAGGAGATAACACA+GGG | - | chr1.2:66528872-66528891 | None:intergenic | 60.0% | |
GCTTGGCGAACCTCCATGTC+AGG | + | chr1.2:66528108-66528127 | MS.gene20707:CDS | 60.0% | |
GGTGGGTCTGTCTCACTGTC+TGG | + | chr1.2:66531515-66531534 | MS.gene20707:CDS | 60.0% | |
GTCCCGTGCTTCTTTCCCCA+GGG | + | chr1.2:66528690-66528709 | MS.gene20707:CDS | 60.0% | |
TCCAACGGTTCCTCCTCTGC+CGG | + | chr1.2:66528586-66528605 | MS.gene20707:CDS | 60.0% | |
TCCCGTGCTTCTTTCCCCAG+GGG | + | chr1.2:66528691-66528710 | MS.gene20707:CDS | 60.0% | |
TGCGCGCCAGGAGATAACAC+AGG | - | chr1.2:66528873-66528892 | None:intergenic | 60.0% | |
TTACCGCAGCACGATCACGC+GGG | - | chr1.2:66527637-66527656 | None:intergenic | 60.0% | |
! | ACCCCTGGGGAAAGAAGCAC+GGG | - | chr1.2:66528695-66528714 | None:intergenic | 60.0% |
! | GCTGGCAATGAAGTGCCAGC+AGG | - | chr1.2:66528533-66528552 | None:intergenic | 60.0% |
! | TGCCAGCAGGTTGAGGATGG+TGG | - | chr1.2:66528520-66528539 | None:intergenic | 60.0% |
CCTCCAGGGCCAGGAGAAGA+GGG | - | chr1.2:66528981-66529000 | None:intergenic | 65.0% | |
CTACAGGGGACTACCCGGAG+AGG | + | chr1.2:66528086-66528105 | MS.gene20707:CDS | 65.0% | |
CTGGCGCGCAACCTGCTGTT+GGG | + | chr1.2:66528883-66528902 | MS.gene20707:CDS | 65.0% | |
GAGGTTCGCCAAGCCTCTCC+GGG | - | chr1.2:66528102-66528121 | None:intergenic | 65.0% | |
GGAGGTTCGCCAAGCCTCTC+CGG | - | chr1.2:66528103-66528122 | None:intergenic | 65.0% | |
GGTCCCGTGCTTCTTTCCCC+AGG | + | chr1.2:66528689-66528708 | MS.gene20707:CDS | 65.0% | |
TCACCCGCGTGATCGTGCTG+CGG | + | chr1.2:66527631-66527650 | MS.gene20707:CDS | 65.0% | |
TCCGGCAGAGGAGGAACCGT+TGG | - | chr1.2:66528590-66528609 | None:intergenic | 65.0% | |
TCCTCCAGGGCCAGGAGAAG+AGG | - | chr1.2:66528982-66529001 | None:intergenic | 65.0% | |
TGGCGCGCAACCTGCTGTTG+GGG | + | chr1.2:66528884-66528903 | MS.gene20707:CDS | 65.0% | |
CCAACAGCAGGTTGCGCGCC+AGG | - | chr1.2:66528885-66528904 | None:intergenic | 70.0% | |
CCCTCTTCTCCTGGCCCTGG+AGG | + | chr1.2:66528978-66528997 | MS.gene20707:CDS | 70.0% | |
CCTGGCGCGCAACCTGCTGT+TGG | + | chr1.2:66528882-66528901 | MS.gene20707:CDS | 70.0% | |
CGTGCAGCAACCTGGTCCCG+TGG | - | chr1.2:66529113-66529132 | None:intergenic | 70.0% | |
CTGCCCTCTTCTCCTGGCCC+TGG | + | chr1.2:66528975-66528994 | MS.gene20707:CDS | 70.0% | |
GGGCCAGGAGAAGAGGGCAG+AGG | - | chr1.2:66528975-66528994 | None:intergenic | 70.0% | |
GGGGACTACCCGGAGAGGCT+TGG | + | chr1.2:66528091-66528110 | MS.gene20707:CDS | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.2 | gene | 66527509 | 66531613 | 66527509 | ID=MS.gene20707 |
chr1.2 | mRNA | 66527509 | 66531613 | 66527509 | ID=MS.gene20707.t1;Parent=MS.gene20707 |
chr1.2 | exon | 66527509 | 66527652 | 66527509 | ID=MS.gene20707.t1.exon1;Parent=MS.gene20707.t1 |
chr1.2 | CDS | 66527509 | 66527652 | 66527509 | ID=cds.MS.gene20707.t1;Parent=MS.gene20707.t1 |
chr1.2 | exon | 66528067 | 66528129 | 66528067 | ID=MS.gene20707.t1.exon2;Parent=MS.gene20707.t1 |
chr1.2 | CDS | 66528067 | 66528129 | 66528067 | ID=cds.MS.gene20707.t1;Parent=MS.gene20707.t1 |
chr1.2 | exon | 66528238 | 66528357 | 66528238 | ID=MS.gene20707.t1.exon3;Parent=MS.gene20707.t1 |
chr1.2 | CDS | 66528238 | 66528357 | 66528238 | ID=cds.MS.gene20707.t1;Parent=MS.gene20707.t1 |
chr1.2 | exon | 66528452 | 66528745 | 66528452 | ID=MS.gene20707.t1.exon4;Parent=MS.gene20707.t1 |
chr1.2 | CDS | 66528452 | 66528745 | 66528452 | ID=cds.MS.gene20707.t1;Parent=MS.gene20707.t1 |
chr1.2 | exon | 66528858 | 66529169 | 66528858 | ID=MS.gene20707.t1.exon5;Parent=MS.gene20707.t1 |
chr1.2 | CDS | 66528858 | 66529169 | 66528858 | ID=cds.MS.gene20707.t1;Parent=MS.gene20707.t1 |
chr1.2 | exon | 66531230 | 66531613 | 66531230 | ID=MS.gene20707.t1.exon6;Parent=MS.gene20707.t1 |
chr1.2 | CDS | 66531230 | 66531613 | 66531230 | ID=cds.MS.gene20707.t1;Parent=MS.gene20707.t1 |
Gene Sequence |
Protein sequence |