Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036742.t1 | XP_003609376.2 | 97.3 | 480 | 12 | 1 | 1 | 480 | 1 | 479 | 4.90E-259 | 903.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036742.t1 | E5KGE0 | 62.8 | 492 | 167 | 5 | 1 | 480 | 1 | 488 | 9.0e-161 | 568.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036742.t1 | G7JE65 | 97.3 | 480 | 12 | 1 | 1 | 480 | 1 | 479 | 3.5e-259 | 903.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene85936 | MS.gene036742 | PPI |
| MS.gene83572 | MS.gene036742 | PPI |
| MS.gene86975 | MS.gene036742 | PPI |
| MS.gene067452 | MS.gene036742 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036742.t1 | MTR_4g114970 | 97.500 | 480 | 11 | 1 | 1 | 480 | 1 | 479 | 0.0 | 979 |
| MS.gene036742.t1 | MTR_4g114970 | 97.455 | 393 | 9 | 1 | 1 | 393 | 1 | 392 | 0.0 | 800 |
| MS.gene036742.t1 | MTR_2g104600 | 46.747 | 415 | 181 | 5 | 27 | 441 | 27 | 401 | 1.65e-131 | 387 |
| MS.gene036742.t1 | MTR_2g104600 | 43.614 | 415 | 178 | 6 | 27 | 441 | 27 | 385 | 2.42e-119 | 356 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene036742.t1 | AT2G42160 | 61.179 | 492 | 175 | 6 | 1 | 480 | 1 | 488 | 0.0 | 629 |
| MS.gene036742.t1 | AT2G42160 | 62.045 | 440 | 153 | 4 | 1 | 429 | 1 | 437 | 0.0 | 577 |
| MS.gene036742.t1 | AT2G42160 | 62.129 | 404 | 139 | 4 | 1 | 393 | 1 | 401 | 0.0 | 531 |
| MS.gene036742.t1 | AT2G26000 | 41.416 | 466 | 252 | 9 | 27 | 480 | 22 | 478 | 7.56e-129 | 382 |
| MS.gene036742.t1 | AT2G26000 | 41.416 | 466 | 252 | 9 | 27 | 480 | 22 | 478 | 7.56e-129 | 382 |
| MS.gene036742.t1 | AT2G26000 | 39.056 | 466 | 245 | 10 | 27 | 480 | 22 | 460 | 1.47e-115 | 348 |
Find 103 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CCTCTGCGTTCTGTGAATTT+AGG | 0.150005 | 8.3:+12779789 | None:intergenic |
| GGTGAGAGAGAATTGGAATT+AGG | 0.180412 | 8.3:+12779726 | None:intergenic |
| CTCTGCGTTCTGTGAATTTA+GGG | 0.219295 | 8.3:+12779790 | None:intergenic |
| AAACTTCTTGCCATTGAAAT+AGG | 0.232877 | 8.3:+12779433 | None:intergenic |
| AGTGAAGATTTAGAAGTTAA+TGG | 0.246664 | 8.3:-12776781 | MS.gene036742:CDS |
| GTGCGTATTCCACTTGTATC+AGG | 0.257066 | 8.3:+12778506 | None:intergenic |
| GTGAGAGAGAATTGGAATTA+GGG | 0.271739 | 8.3:+12779727 | None:intergenic |
| GTGGAGAAGGCTGCAACTTC+TGG | 0.280137 | 8.3:-12775760 | MS.gene036742:CDS |
| GAATGAGAGGGTCCTTGATT+TGG | 0.301939 | 8.3:-12775374 | MS.gene036742:CDS |
| CATTCTGCCCTTAGGTTAAT+CGG | 0.302536 | 8.3:-12775619 | MS.gene036742:intron |
| GTGAAGATTTAGAAGTTAAT+GGG | 0.313739 | 8.3:-12776780 | MS.gene036742:CDS |
| TCATCGAAGGAGAAATAATT+AGG | 0.314747 | 8.3:+12779681 | None:intergenic |
| CATCCTGTTGTTGACATAAT+CGG | 0.338420 | 8.3:+12777256 | None:intergenic |
| GAGAAGAGGTGAGAGAGAAT+TGG | 0.361552 | 8.3:+12779719 | None:intergenic |
| GTCAGACTCAAATGGAATAA+AGG | 0.364370 | 8.3:-12775208 | MS.gene036742:CDS |
| TTATGTCCATCGACTGAATC+AGG | 0.387311 | 8.3:-12776887 | MS.gene036742:CDS |
| ACAACAAATTTGGGATTATG+TGG | 0.392975 | 8.3:-12776917 | MS.gene036742:CDS |
| TTCATCATCTTCTCTTCATC+AGG | 0.396642 | 8.3:-12779620 | MS.gene036742:intron |
| ACCAACATGTCCAGTTTGCT+TGG | 0.402731 | 8.3:-12778691 | MS.gene036742:CDS |
| CCGTCTTCTTACATCTCAAT+TGG | 0.403056 | 8.3:-12776167 | MS.gene036742:CDS |
| GTCTGGGTTTGTATGATTTG+TGG | 0.411595 | 8.3:-12777195 | MS.gene036742:CDS |
| GTGGAACATTAGATGATGTC+TGG | 0.413609 | 8.3:-12777212 | MS.gene036742:CDS |
| ACTTCTTGCCTCAATTAGTA+AGG | 0.414456 | 8.3:+12775810 | None:intergenic |
| TGAAACTCACCCAAGCAAAC+TGG | 0.414850 | 8.3:+12778681 | None:intergenic |
| GGTCCTTGATTTGGAGGAAC+AGG | 0.415267 | 8.3:-12775365 | MS.gene036742:intron |
| TTCAACTTTGCTGTTAAAGA+AGG | 0.416559 | 8.3:+12776756 | None:intergenic |
| GCATTTCATACCTATTTCAA+TGG | 0.416711 | 8.3:-12779443 | MS.gene036742:CDS |
| TGTTTGAATCCCAGAGAGAC+TGG | 0.421884 | 8.3:-12778531 | MS.gene036742:intron |
| TTCTTGCTGTTTCCAGGAGA+AGG | 0.425015 | 8.3:+12775153 | None:intergenic |
| GCTCATGAGCAACCTTCTCC+TGG | 0.443145 | 8.3:-12775165 | MS.gene036742:CDS |
| GTTCACTGTATGTCTCTAGA+AGG | 0.443877 | 8.3:-12776826 | MS.gene036742:CDS |
| GGAGCGGAGAAGATGAGTTC+GGG | 0.448861 | 8.3:+12779831 | None:intergenic |
| GAGAGGAGTGTGAAGCGCTT+CGG | 0.450487 | 8.3:+12779751 | None:intergenic |
| GGCTGCAACTTCTGGCATGC+TGG | 0.450669 | 8.3:-12775752 | MS.gene036742:CDS |
| TGGAGCGGAGAAGATGAGTT+CGG | 0.454323 | 8.3:+12779830 | None:intergenic |
| GATGAAGACGATCAAGATAG+TGG | 0.455616 | 8.3:+12779637 | None:intergenic |
| AGAATTGGAATTAGGGAGAG+AGG | 0.456750 | 8.3:+12779734 | None:intergenic |
| GATAAAATGTCAGACTCAAA+TGG | 0.459339 | 8.3:-12775216 | MS.gene036742:CDS |
| GGAACGATGGGATGGAAGAT+AGG | 0.463072 | 8.3:-12779508 | MS.gene036742:CDS |
| CGTCGTCGACTGAGTGGACT+CGG | 0.465807 | 8.3:+12779868 | None:intergenic |
| TCTCCTTCGATGATTTCATT+CGG | 0.467942 | 8.3:-12779671 | MS.gene036742:CDS |
| CTGCCGATTATGTCAACAAC+AGG | 0.469592 | 8.3:-12777259 | MS.gene036742:CDS |
| TTATGAATCCTTACTAATTG+AGG | 0.471285 | 8.3:-12775818 | MS.gene036742:CDS |
| TCGGAATGTGAAGAAGTTGC+TGG | 0.471476 | 8.3:-12778741 | MS.gene036742:CDS |
| TTTGATTTGGTAGGAACGAT+GGG | 0.480219 | 8.3:-12779520 | MS.gene036742:intron |
| TGTATGATTTGTGGATTTGT+CGG | 0.483896 | 8.3:-12777186 | MS.gene036742:CDS |
| GTGGACATATTTGTCTTGCC+AGG | 0.485200 | 8.3:-12778441 | MS.gene036742:intron |
| TGAGAGGGTCCTTGATTTGG+AGG | 0.485934 | 8.3:-12775371 | MS.gene036742:CDS |
| CCGTTATTACTTACCTCAGC+AGG | 0.492902 | 8.3:+12779407 | None:intergenic |
| ATTTGTGGATTTGTCGGATG+TGG | 0.494341 | 8.3:-12777180 | MS.gene036742:CDS |
| CCAACATGTCCAGTTTGCTT+GGG | 0.495855 | 8.3:-12778690 | MS.gene036742:intron |
| GTTGCTGGGACTCCTCCAGC+TGG | 0.513889 | 8.3:-12778726 | MS.gene036742:CDS |
| CTTCTCCACTGCTTCAGATA+CGG | 0.513939 | 8.3:+12775774 | None:intergenic |
| CAGGATCAATCTAGAATTGA+CGG | 0.519347 | 8.3:-12776868 | MS.gene036742:CDS |
| TTCACTGTATGTCTCTAGAA+GGG | 0.522047 | 8.3:-12776825 | MS.gene036742:CDS |
| TTTGCTTTCCGTGGAATACT+CGG | 0.522856 | 8.3:-12778760 | MS.gene036742:CDS |
| TGCGTATTCCACTTGTATCA+GGG | 0.527421 | 8.3:+12778507 | None:intergenic |
| GTTCCACAAATAAAACAAGT+TGG | 0.529607 | 8.3:+12777228 | None:intergenic |
| CGCAAGGGCATTGAAATGAA+TGG | 0.532039 | 8.3:+12778471 | None:intergenic |
| GGTATTTCTGTACAACCAGC+TGG | 0.536457 | 8.3:+12778711 | None:intergenic |
| AAGGACATGCTATTCAGCAT+TGG | 0.544403 | 8.3:-12776978 | MS.gene036742:CDS |
| ATTGATCCTGATTCAGTCGA+TGG | 0.544517 | 8.3:+12776881 | None:intergenic |
| ATACCTGTTCCTCCAAATCA+AGG | 0.546149 | 8.3:+12775362 | None:intergenic |
| ATGAAGACGATCAAGATAGT+GGG | 0.546605 | 8.3:+12779638 | None:intergenic |
| CTTTAACAGCAAAGTTGAAG+CGG | 0.546937 | 8.3:-12776752 | MS.gene036742:intron |
| ATTTGGTAGGAACGATGGGA+TGG | 0.551457 | 8.3:-12779516 | MS.gene036742:intron |
| TGGAACATTAGATGATGTCT+GGG | 0.559204 | 8.3:-12777211 | MS.gene036742:CDS |
| TTCACATTCCGAGTATTCCA+CGG | 0.559393 | 8.3:+12778752 | None:intergenic |
| CGTATCTGAAGCAGTGGAGA+AGG | 0.559498 | 8.3:-12775773 | MS.gene036742:CDS |
| AGATTAAAGAAGCAGAAGAG+AGG | 0.561135 | 8.3:-12775562 | MS.gene036742:intron |
| CAACAAATTTGGGATTATGT+GGG | 0.563048 | 8.3:-12776916 | MS.gene036742:CDS |
| GAAGGTTGCTCATGAGCCAC+TGG | 0.563743 | 8.3:+12775171 | None:intergenic |
| CGGAATGTGAAGAAGTTGCT+GGG | 0.571574 | 8.3:-12778740 | MS.gene036742:CDS |
| TTCTTGGGATTGGGTTGGAG+CGG | 0.574169 | 8.3:+12779815 | None:intergenic |
| AATGCCCTTGCGTCTCAAAG+TGG | 0.575637 | 8.3:-12778460 | MS.gene036742:CDS |
| GATTCTCGTCGTCGACTGAG+TGG | 0.577788 | 8.3:+12779862 | None:intergenic |
| CATTGAAGTCGATGAATGAG+AGG | 0.577929 | 8.3:-12775387 | MS.gene036742:CDS |
| TAGAATTGACGGCAAGTCGA+AGG | 0.578499 | 8.3:-12776857 | MS.gene036742:CDS |
| TATGTCCACTTTGAGACGCA+AGG | 0.588521 | 8.3:+12778455 | None:intergenic |
| AGAAAGAAATGTTGTTGCTG+AGG | 0.588529 | 8.3:-12775698 | MS.gene036742:intron |
| AAGATGAGTTCGGGATCGAG+TGG | 0.588594 | 8.3:+12779840 | None:intergenic |
| AGACTCAAATGGAATAAAGG+AGG | 0.592588 | 8.3:-12775205 | MS.gene036742:CDS |
| GTGGATTTGTCGGATGTGGA+AGG | 0.595592 | 8.3:-12777176 | MS.gene036742:intron |
| CCCAAGCAAACTGGACATGT+TGG | 0.601547 | 8.3:+12778690 | None:intergenic |
| AAGCTCCGTATCTGAAGCAG+TGG | 0.608444 | 8.3:-12775779 | MS.gene036742:CDS |
| ATGTCCACTTTGAGACGCAA+GGG | 0.620907 | 8.3:+12778456 | None:intergenic |
| GACTCAAATGGAATAAAGGA+GGG | 0.622185 | 8.3:-12775204 | MS.gene036742:CDS |
| GTGGACTCGGAGGAAGAACA+TGG | 0.623052 | 8.3:+12779881 | None:intergenic |
| ACAGCGAGGATGAAGAGAAG+AGG | 0.623767 | 8.3:+12779705 | None:intergenic |
| TGAAGATTTAGAAGTTAATG+GGG | 0.626069 | 8.3:-12776779 | MS.gene036742:CDS |
| TCACTGTATGTCTCTAGAAG+GGG | 0.634476 | 8.3:-12776824 | MS.gene036742:CDS |
| CCAATTGAGATGTAAGAAGA+CGG | 0.636618 | 8.3:+12776167 | None:intergenic |
| AAACCGAATGAAATCATCGA+AGG | 0.643428 | 8.3:+12779668 | None:intergenic |
| AAAACAGAAAGTCTGGTCGA+AGG | 0.644959 | 8.3:-12775131 | MS.gene036742:CDS |
| ACAGAAAGTCTGGTCGAAGG+CGG | 0.651997 | 8.3:-12775128 | MS.gene036742:CDS |
| ATTGAAGTCGATGAATGAGA+GGG | 0.674240 | 8.3:-12775386 | MS.gene036742:CDS |
| CCTAAATTCACAGAACGCAG+AGG | 0.674835 | 8.3:-12779789 | MS.gene036742:CDS |
| AGACTGGACCCTGATACAAG+TGG | 0.679214 | 8.3:-12778515 | MS.gene036742:CDS |
| TGAAGACGATCAAGATAGTG+GGG | 0.690985 | 8.3:+12779639 | None:intergenic |
| ATTTCTGTACAACCAGCTGG+AGG | 0.702761 | 8.3:+12778714 | None:intergenic |
| AGAAATAATTAGGAACAGCG+AGG | 0.702814 | 8.3:+12779691 | None:intergenic |
| GGAGGGAACAGTCTTACCAG+TGG | 0.721862 | 8.3:-12775187 | MS.gene036742:CDS |
| CGTCGACTGAGTGGACTCGG+AGG | 0.727644 | 8.3:+12779871 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATTAAAATCAACAATTA+GGG | + | chr8.3:12775464-12775483 | None:intergenic | 10.0% |
| !! | ATAATTATGAAATATTATCT+TGG | - | chr8.3:12776897-12776916 | MS.gene036742:CDS | 10.0% |
| !! | TAATTATGAAATATTATCTT+GGG | - | chr8.3:12776898-12776917 | MS.gene036742:CDS | 10.0% |
| !! | TATATAAATGACAATAAAAT+GGG | + | chr8.3:12777935-12777954 | None:intergenic | 10.0% |
| !!! | TTTTTATTTTCTAAAAAACA+AGG | - | chr8.3:12777479-12777498 | MS.gene036742:intron | 10.0% |
| !! | ATAAATTTAAAAAACGACAA+AGG | + | chr8.3:12776140-12776159 | None:intergenic | 15.0% |
| !! | CAAAATTAAAATCAACAATT+AGG | + | chr8.3:12775465-12775484 | None:intergenic | 15.0% |
| !! | CAAGTAAATAGTATTAATAA+GGG | - | chr8.3:12775990-12776009 | MS.gene036742:intron | 15.0% |
| !! | CATATAGTTATTCTATAAAT+GGG | - | chr8.3:12778632-12778651 | MS.gene036742:intron | 15.0% |
| !! | CATTTATAGAATAACTATAT+GGG | + | chr8.3:12778633-12778652 | None:intergenic | 15.0% |
| !! | CCAACTTAAATTAATAATTA+GGG | + | chr8.3:12777433-12777452 | None:intergenic | 15.0% |
| !! | CTATATAAATGACAATAAAA+TGG | + | chr8.3:12777936-12777955 | None:intergenic | 15.0% |
| !! | TATTATTACACTTTAATCTT+TGG | - | chr8.3:12776621-12776640 | MS.gene036742:intron | 15.0% |
| !! | TCAAATAAGTTAATTCAAAT+AGG | - | chr8.3:12775862-12775881 | MS.gene036742:intron | 15.0% |
| !! | TCAAGTAAATAGTATTAATA+AGG | - | chr8.3:12775989-12776008 | MS.gene036742:intron | 15.0% |
| !! | TCATAATACTAAAACAAAAA+TGG | + | chr8.3:12779169-12779188 | None:intergenic | 15.0% |
| !! | TTTAAATATGTGATCATTTA+GGG | - | chr8.3:12779582-12779601 | MS.gene036742:intron | 15.0% |
| !! | TTTGTTTAACATATTAAGTA+GGG | + | chr8.3:12777907-12777926 | None:intergenic | 15.0% |
| !!! | AAGTATGTCTAAATAAATTT+TGG | + | chr8.3:12777192-12777211 | None:intergenic | 15.0% |
| !!! | ACTTTTTTTTTCTTTTTCAA+GGG | + | chr8.3:12775734-12775753 | None:intergenic | 15.0% |
| !!! | AGTAAAGTTGTTTTTTTTTT+TGG | - | chr8.3:12779530-12779549 | MS.gene036742:intron | 15.0% |
| !!! | ATTATAATGTTAACTTGTTA+AGG | + | chr8.3:12778355-12778374 | None:intergenic | 15.0% |
| !!! | CATTTTATTGTCATTTATAT+AGG | - | chr8.3:12777934-12777953 | MS.gene036742:intron | 15.0% |
| !!! | CCTAATTATTAATTTAAGTT+GGG | - | chr8.3:12777431-12777450 | MS.gene036742:intron | 15.0% |
| !!! | TGTTGATTTTAATTTTGATT+TGG | - | chr8.3:12775468-12775487 | MS.gene036742:intron | 15.0% |
| !!! | TTGTCGTTTTTTAAATTTAT+TGG | - | chr8.3:12776140-12776159 | MS.gene036742:intron | 15.0% |
| !!! | TTTTAATCTAGATATAAAGA+AGG | - | chr8.3:12778004-12778023 | MS.gene036742:intron | 15.0% |
| !!! | TTTTGTTTAACATATTAAGT+AGG | + | chr8.3:12777908-12777927 | None:intergenic | 15.0% |
| !! | AATAGGACTTAAGTAAAAAT+AGG | - | chr8.3:12775879-12775898 | MS.gene036742:intron | 20.0% |
| !! | ACTTATGATGTTTATATTGT+AGG | - | chr8.3:12777718-12777737 | MS.gene036742:intron | 20.0% |
| !! | CCATATAGTTATTCTATAAA+TGG | - | chr8.3:12778631-12778650 | MS.gene036742:intron | 20.0% |
| !! | CCATTTATAGAATAACTATA+TGG | + | chr8.3:12778634-12778653 | None:intergenic | 20.0% |
| !! | CCCAACTTAAATTAATAATT+AGG | + | chr8.3:12777434-12777453 | None:intergenic | 20.0% |
| !! | CCCTAATTATTAATTTAAGT+TGG | - | chr8.3:12777430-12777449 | MS.gene036742:intron | 20.0% |
| !! | GTTTAAATATGTGATCATTT+AGG | - | chr8.3:12779581-12779600 | MS.gene036742:intron | 20.0% |
| !! | TCATTAAAAATTCAGAAATG+TGG | - | chr8.3:12779409-12779428 | MS.gene036742:intron | 20.0% |
| !! | TGAAATGAAGCTTATATTTA+GGG | - | chr8.3:12776041-12776060 | MS.gene036742:intron | 20.0% |
| !! | TGGAAATATTATTGTATTGA+TGG | - | chr8.3:12777677-12777696 | MS.gene036742:intron | 20.0% |
| !! | TTAAACATGTAATGAGAATA+TGG | + | chr8.3:12779567-12779586 | None:intergenic | 20.0% |
| !! | TTCAAAAAAGACTTGTATTT+AGG | - | chr8.3:12776075-12776094 | MS.gene036742:intron | 20.0% |
| !! | TTGAAATGAAGCTTATATTT+AGG | - | chr8.3:12776040-12776059 | MS.gene036742:intron | 20.0% |
| !! | TTTATCTTTATACAAGAGTT+TGG | + | chr8.3:12777052-12777071 | None:intergenic | 20.0% |
| !!! | AAGGTATTAATTGATTATTG+AGG | + | chr8.3:12776121-12776140 | None:intergenic | 20.0% |
| !!! | ACTAAATGGATTTTAATATC+TGG | + | chr8.3:12777401-12777420 | None:intergenic | 20.0% |
| !!! | ATTACAGAACTTTTTCAAAA+TGG | + | chr8.3:12775424-12775443 | None:intergenic | 20.0% |
| !!! | ATTTTAGAACACAACAAATT+TGG | - | chr8.3:12778074-12778093 | MS.gene036742:intron | 20.0% |
| !!! | ATTTTATGCTGATACTAATT+TGG | - | chr8.3:12778484-12778503 | MS.gene036742:CDS | 20.0% |
| !!! | ATTTTCTAAAAAACAAGGAA+GGG | - | chr8.3:12777484-12777503 | MS.gene036742:intron | 20.0% |
| !!! | GACTTTTTTTTTCTTTTTCA+AGG | + | chr8.3:12775735-12775754 | None:intergenic | 20.0% |
| !!! | GAGAATATCATAATTTTGTT+TGG | - | chr8.3:12776928-12776947 | MS.gene036742:CDS | 20.0% |
| !!! | GATTTTAATTTTGATTTGGT+AGG | - | chr8.3:12775472-12775491 | MS.gene036742:intron | 20.0% |
| !!! | TATTTTCTAAAAAACAAGGA+AGG | - | chr8.3:12777483-12777502 | MS.gene036742:intron | 20.0% |
| !!! | TTAATGTGTTATTTTGTGTA+TGG | - | chr8.3:12775910-12775929 | MS.gene036742:intron | 20.0% |
| !!! | TTTTAGAACACAACAAATTT+GGG | - | chr8.3:12778075-12778094 | MS.gene036742:intron | 20.0% |
| !!! | TTTTATGCTGATACTAATTT+GGG | - | chr8.3:12778485-12778504 | MS.gene036742:CDS | 20.0% |
| ! | AAAGAGAGATATACGTAATA+AGG | + | chr8.3:12776170-12776189 | None:intergenic | 25.0% |
| ! | AAAGATAAAAGATGCAACAT+GGG | - | chr8.3:12777063-12777082 | MS.gene036742:intron | 25.0% |
| ! | AAGTGATGTAATTTATAGTG+TGG | - | chr8.3:12779017-12779036 | MS.gene036742:intron | 25.0% |
| ! | ACATGACAAGTACAAATTTA+TGG | + | chr8.3:12775630-12775649 | None:intergenic | 25.0% |
| ! | ACTTATTTGAGCTTATTTAC+TGG | + | chr8.3:12775852-12775871 | None:intergenic | 25.0% |
| ! | AGTGAAAAAAATTTCAAGGA+TGG | + | chr8.3:12778888-12778907 | None:intergenic | 25.0% |
| ! | AGTGAAGATTTAGAAGTTAA+TGG | - | chr8.3:12778220-12778239 | MS.gene036742:intron | 25.0% |
| ! | ATTACACTTTAATCTTTGGT+TGG | - | chr8.3:12776625-12776644 | MS.gene036742:intron | 25.0% |
| ! | ATTGGAAAACTTCTATACAA+AGG | + | chr8.3:12779684-12779703 | None:intergenic | 25.0% |
| ! | CGGAAAGCAAAAATAAAATA+TGG | + | chr8.3:12776232-12776251 | None:intergenic | 25.0% |
| ! | GTAAACATTAAACTCTATTC+AGG | - | chr8.3:12778927-12778946 | MS.gene036742:intron | 25.0% |
| ! | GTGAAGATTTAGAAGTTAAT+GGG | - | chr8.3:12778221-12778240 | MS.gene036742:intron | 25.0% |
| ! | GTGTAATAATATGTCAAAAC+AGG | + | chr8.3:12776612-12776631 | None:intergenic | 25.0% |
| ! | TAAAGATAAAAGATGCAACA+TGG | - | chr8.3:12777062-12777081 | MS.gene036742:intron | 25.0% |
| ! | TAACTTCATTCCAAACAAAT+TGG | + | chr8.3:12779488-12779507 | None:intergenic | 25.0% |
| ! | TCAAATGATGATCAAAATGT+AGG | - | chr8.3:12776196-12776215 | MS.gene036742:intron | 25.0% |
| ! | TCTATACAAAGGATTAATGA+AGG | + | chr8.3:12779673-12779692 | None:intergenic | 25.0% |
| ! | TGAAGATTTAGAAGTTAATG+GGG | - | chr8.3:12778222-12778241 | MS.gene036742:intron | 25.0% |
| ! | TTATGAATCCTTACTAATTG+AGG | - | chr8.3:12779183-12779202 | MS.gene036742:intron | 25.0% |
| !! | ACCTTAACAAGTTTTTAACA+AGG | - | chr8.3:12778325-12778344 | MS.gene036742:intron | 25.0% |
| !! | CAATTTTATTGTTCTCTGAT+GGG | - | chr8.3:12779700-12779719 | MS.gene036742:CDS | 25.0% |
| !!! | ATAGGTATAGTGTTTTGATT+AGG | - | chr8.3:12775511-12775530 | MS.gene036742:intron | 25.0% |
| !!! | ATCAGTTCTTTAATTTTCGT+TGG | - | chr8.3:12777860-12777879 | MS.gene036742:intron | 25.0% |
| !!! | CTTGAAATTTTTTTCACTGT+GGG | - | chr8.3:12778890-12778909 | MS.gene036742:intron | 25.0% |
| !!! | GTTTTTTGTATAAGCTATCT+TGG | - | chr8.3:12775760-12775779 | MS.gene036742:CDS | 25.0% |
| !!! | TACACTTTTCTAGTTCATTT+TGG | + | chr8.3:12779279-12779298 | None:intergenic | 25.0% |
| !!! | TATTTGCTTTTGTTTTGTCA+GGG | - | chr8.3:12777958-12777977 | MS.gene036742:intron | 25.0% |
| !!! | TATTTTATTTTTGCTTTCCG+TGG | - | chr8.3:12776232-12776251 | MS.gene036742:intron | 25.0% |
| !!! | TTATTTGCTTTTGTTTTGTC+AGG | - | chr8.3:12777957-12777976 | MS.gene036742:intron | 25.0% |
| !!! | TTGAAATTTTTTTCACTGTG+GGG | - | chr8.3:12778891-12778910 | MS.gene036742:intron | 25.0% |
| AAACACTTATGAGACTGTTT+GGG | + | chr8.3:12775826-12775845 | None:intergenic | 30.0% | |
| AAACTTCTTGCCATTGAAAT+AGG | + | chr8.3:12775571-12775590 | None:intergenic | 30.0% | |
| AAGAGTTATATTGCCTAACT+AGG | - | chr8.3:12776742-12776761 | MS.gene036742:intron | 30.0% | |
| AGCAAGCAATAAGGAAATAT+AGG | + | chr8.3:12779339-12779358 | None:intergenic | 30.0% | |
| CATATAGATGTGTTCAATTC+TGG | - | chr8.3:12775955-12775974 | MS.gene036742:intron | 30.0% | |
| CCAAAGTTTAAGAACGTATT+TGG | - | chr8.3:12776856-12776875 | MS.gene036742:CDS | 30.0% | |
| CCAAATACGTTCTTAAACTT+TGG | + | chr8.3:12776859-12776878 | None:intergenic | 30.0% | |
| CCACAGTGAAAAAAATTTCA+AGG | + | chr8.3:12778892-12778911 | None:intergenic | 30.0% | |
| CCATCAGAGAACAATAAAAT+TGG | + | chr8.3:12779702-12779721 | None:intergenic | 30.0% | |
| GACATACTTCACTTATTGTT+CGG | - | chr8.3:12777203-12777222 | MS.gene036742:CDS | 30.0% | |
| GATAAAATGTCAGACTCAAA+TGG | - | chr8.3:12779785-12779804 | MS.gene036742:CDS | 30.0% | |
| GATGTGTAAACATTGTTTCA+TGG | - | chr8.3:12778685-12778704 | MS.gene036742:intron | 30.0% | |
| GCATGTGAAAGAAAAATCAT+CGG | + | chr8.3:12778765-12778784 | None:intergenic | 30.0% | |
| GCATTTCATACCTATTTCAA+TGG | - | chr8.3:12775558-12775577 | MS.gene036742:intron | 30.0% | |
| GTTCCACAAATAAAACAAGT+TGG | + | chr8.3:12777776-12777795 | None:intergenic | 30.0% | |
| GTTTCTTTCACTTATGATGA+AGG | - | chr8.3:12779053-12779072 | MS.gene036742:intron | 30.0% | |
| TAAACACTTATGAGACTGTT+TGG | + | chr8.3:12775827-12775846 | None:intergenic | 30.0% | |
| TAGGGAGAAAATACACTAAA+TGG | + | chr8.3:12777415-12777434 | None:intergenic | 30.0% | |
| TCATCGAAGGAGAAATAATT+AGG | + | chr8.3:12775323-12775342 | None:intergenic | 30.0% | |
| TGAACACATCTATATGCAAA+AGG | + | chr8.3:12775951-12775970 | None:intergenic | 30.0% | |
| ! | AAAACAGGTTTTCATGGAAT+GGG | + | chr8.3:12776597-12776616 | None:intergenic | 30.0% |
| ! | AAACAAATTGGTAGCTTAAG+TGG | + | chr8.3:12779476-12779495 | None:intergenic | 30.0% |
| ! | ACAACAAATTTGGGATTATG+TGG | - | chr8.3:12778084-12778103 | MS.gene036742:intron | 30.0% |
| ! | ACTTAAGCTACCAATTTGTT+TGG | - | chr8.3:12779475-12779494 | MS.gene036742:CDS | 30.0% |
| ! | CAACAAATTTGGGATTATGT+GGG | - | chr8.3:12778085-12778104 | MS.gene036742:intron | 30.0% |
| ! | CCAATTTTATTGTTCTCTGA+TGG | - | chr8.3:12779699-12779718 | MS.gene036742:CDS | 30.0% |
| ! | CTAGGTTGGAAAAAATTGAT+AGG | + | chr8.3:12777107-12777126 | None:intergenic | 30.0% |
| ! | CTCTGTCACTGATTAATTAA+TGG | - | chr8.3:12778784-12778803 | MS.gene036742:CDS | 30.0% |
| ! | TATGTCAAAACAGGTTTTCA+TGG | + | chr8.3:12776603-12776622 | None:intergenic | 30.0% |
| ! | TGTATGATTTGTGGATTTGT+CGG | - | chr8.3:12777815-12777834 | MS.gene036742:intron | 30.0% |
| !! | GCCTTGTTAAAAACTTGTTA+AGG | + | chr8.3:12778329-12778348 | None:intergenic | 30.0% |
| !! | TGTGAATTTAGGGTTTTCTT+GGG | + | chr8.3:12775204-12775223 | None:intergenic | 30.0% |
| !! | TGTTTGCTGTGTAATTAACA+CGG | - | chr8.3:12778552-12778571 | MS.gene036742:intron | 30.0% |
| !! | TTCAACTTTGCTGTTAAAGA+AGG | + | chr8.3:12778248-12778267 | None:intergenic | 30.0% |
| !!! | AACAAAAGCACTGGTTTTAT+TGG | - | chr8.3:12777645-12777664 | MS.gene036742:intron | 30.0% |
| !!! | AAGCCAACTTGTTTTATTTG+TGG | - | chr8.3:12777770-12777789 | MS.gene036742:intron | 30.0% |
| !!! | CCTTGAAATTTTTTTCACTG+TGG | - | chr8.3:12778889-12778908 | MS.gene036742:intron | 30.0% |
| !!! | CTATCAATTTTTTCCAACCT+AGG | - | chr8.3:12777105-12777124 | MS.gene036742:intron | 30.0% |
| AAACCGAATGAAATCATCGA+AGG | + | chr8.3:12775336-12775355 | None:intergenic | 35.0% | |
| AACGAGTTTGAAAGTTTCTC+AGG | - | chr8.3:12776812-12776831 | MS.gene036742:CDS | 35.0% | |
| AAGCTATCTTGGACATCTTA+TGG | - | chr8.3:12775771-12775790 | MS.gene036742:CDS | 35.0% | |
| AAGGTAACAACTTCAACACA+TGG | - | chr8.3:12777355-12777374 | MS.gene036742:intron | 35.0% | |
| AATTGCTATGATACTCGCAA+TGG | - | chr8.3:12779085-12779104 | MS.gene036742:intron | 35.0% | |
| ACAACCAAATGTGTGACATT+AGG | + | chr8.3:12778711-12778730 | None:intergenic | 35.0% | |
| ACCTTTATACCATCCACTTT+GGG | + | chr8.3:12776988-12777007 | None:intergenic | 35.0% | |
| ACTTCTTGCCTCAATTAGTA+AGG | + | chr8.3:12779194-12779213 | None:intergenic | 35.0% | |
| AGAAAGAAATGTTGTTGCTG+AGG | - | chr8.3:12779303-12779322 | MS.gene036742:intron | 35.0% | |
| AGAAATAATTAGGAACAGCG+AGG | + | chr8.3:12775313-12775332 | None:intergenic | 35.0% | |
| AGACTCAAATGGAATAAAGG+AGG | - | chr8.3:12779796-12779815 | MS.gene036742:CDS | 35.0% | |
| AGATTAAAGAAGCAGAAGAG+AGG | - | chr8.3:12779439-12779458 | MS.gene036742:CDS | 35.0% | |
| AGCAAACAAAATCATACCAC+AGG | + | chr8.3:12778540-12778559 | None:intergenic | 35.0% | |
| AGCAAGAAAAACAGAAAGTC+TGG | - | chr8.3:12779863-12779882 | MS.gene036742:CDS | 35.0% | |
| ATACTTCACTTATTGTTCGG+AGG | - | chr8.3:12777206-12777225 | MS.gene036742:CDS | 35.0% | |
| ATGAAGACGATCAAGATAGT+GGG | + | chr8.3:12775366-12775385 | None:intergenic | 35.0% | |
| ATGAGCTTAATATCCTAGGT+TGG | + | chr8.3:12777121-12777140 | None:intergenic | 35.0% | |
| ATGATTCTTCATGAGAAGCT+TGG | - | chr8.3:12776695-12776714 | MS.gene036742:intron | 35.0% | |
| ATTGAAGTCGATGAATGAGA+GGG | - | chr8.3:12779615-12779634 | MS.gene036742:intron | 35.0% | |
| ATTGCTATGATACTCGCAAT+GGG | - | chr8.3:12779086-12779105 | MS.gene036742:intron | 35.0% | |
| CAGAGTTAAAGCAAGCAATA+AGG | + | chr8.3:12779348-12779367 | None:intergenic | 35.0% | |
| CATCCTGTTGTTGACATAAT+CGG | + | chr8.3:12777748-12777767 | None:intergenic | 35.0% | |
| CCAATTGAGATGTAAGAAGA+CGG | + | chr8.3:12778837-12778856 | None:intergenic | 35.0% | |
| CCAGAATGCATTGAATTTCT+GGG | - | chr8.3:12777253-12777272 | MS.gene036742:CDS | 35.0% | |
| CTAACTAGGATATTATCGTG+AGG | - | chr8.3:12776756-12776775 | MS.gene036742:CDS | 35.0% | |
| CTAGTTTCTTGAATGTCAAC+TGG | - | chr8.3:12778994-12779013 | MS.gene036742:intron | 35.0% | |
| CTCACGATAATATCCTAGTT+AGG | + | chr8.3:12776758-12776777 | None:intergenic | 35.0% | |
| CTTTAACAGCAAAGTTGAAG+CGG | - | chr8.3:12778249-12778268 | MS.gene036742:intron | 35.0% | |
| GACTCAAATGGAATAAAGGA+GGG | - | chr8.3:12779797-12779816 | MS.gene036742:CDS | 35.0% | |
| GTCAGACTCAAATGGAATAA+AGG | - | chr8.3:12779793-12779812 | MS.gene036742:CDS | 35.0% | |
| GTGAGAGAGAATTGGAATTA+GGG | + | chr8.3:12775277-12775296 | None:intergenic | 35.0% | |
| TACCTTTATACCATCCACTT+TGG | + | chr8.3:12776989-12777008 | None:intergenic | 35.0% | |
| TCACTTATGATGAAGGCTTT+GGG | - | chr8.3:12779060-12779079 | MS.gene036742:intron | 35.0% | |
| TCTCCTTCGATGATTTCATT+CGG | - | chr8.3:12775330-12775349 | MS.gene036742:intron | 35.0% | |
| TGAGGTGATTATGATTGTGT+GGG | - | chr8.3:12776413-12776432 | MS.gene036742:intron | 35.0% | |
| TGGAACATTAGATGATGTCT+GGG | - | chr8.3:12777790-12777809 | MS.gene036742:intron | 35.0% | |
| TGGAATGTGCAATGATAAGT+TGG | + | chr8.3:12777381-12777400 | None:intergenic | 35.0% | |
| TGTCATGTAGACATAGAGAT+AGG | - | chr8.3:12778607-12778626 | MS.gene036742:intron | 35.0% | |
| TTCACTTATGATGAAGGCTT+TGG | - | chr8.3:12779059-12779078 | MS.gene036742:intron | 35.0% | |
| TTCATCATCTTCTCTTCATC+AGG | - | chr8.3:12775381-12775400 | MS.gene036742:CDS | 35.0% | |
| ! | AAACAGGTTTTCATGGAATG+GGG | + | chr8.3:12776596-12776615 | None:intergenic | 35.0% |
| ! | AATGCATTGAATTTCTGGGA+AGG | - | chr8.3:12777257-12777276 | MS.gene036742:CDS | 35.0% |
| ! | ATTAGACTCTTAGAGCATCA+TGG | - | chr8.3:12776655-12776674 | MS.gene036742:intron | 35.0% |
| ! | CAAAACAGGTTTTCATGGAA+TGG | + | chr8.3:12776598-12776617 | None:intergenic | 35.0% |
| ! | CAGGATCAATCTAGAATTGA+CGG | - | chr8.3:12778133-12778152 | MS.gene036742:intron | 35.0% |
| ! | GATGATTTCATTCGGTTTTG+TGG | - | chr8.3:12775338-12775357 | MS.gene036742:intron | 35.0% |
| ! | TAATGGACATGAACAGATTG+TGG | - | chr8.3:12778801-12778820 | MS.gene036742:intron | 35.0% |
| ! | TTAGACTCTTAGAGCATCAT+GGG | - | chr8.3:12776656-12776675 | MS.gene036742:intron | 35.0% |
| ! | TTCACTGTATGTCTCTAGAA+GGG | - | chr8.3:12778176-12778195 | MS.gene036742:intron | 35.0% |
| ! | TTCTAAAAAACAAGGAAGGG+CGG | - | chr8.3:12777487-12777506 | MS.gene036742:intron | 35.0% |
| ! | TTTGCTGTGTAATTAACACG+GGG | - | chr8.3:12778554-12778573 | MS.gene036742:intron | 35.0% |
| !! | AAAAAGCTTCTCTGAAATCG+TGG | - | chr8.3:12778286-12778305 | MS.gene036742:intron | 35.0% |
| !! | AGGTAAGTAATAACGGGTTT+GGG | - | chr8.3:12775601-12775620 | MS.gene036742:CDS | 35.0% |
| !! | ATTGTGTGGGTTGATGTTTA+TGG | - | chr8.3:12776426-12776445 | MS.gene036742:intron | 35.0% |
| !! | ATTTAGGGTTTTCTTGGGAT+TGG | + | chr8.3:12775199-12775218 | None:intergenic | 35.0% |
| !! | CAACTTAGTTTGCAGCTTAT+AGG | - | chr8.3:12775680-12775699 | MS.gene036742:intron | 35.0% |
| !! | CTGTGAATTTAGGGTTTTCT+TGG | + | chr8.3:12775205-12775224 | None:intergenic | 35.0% |
| !! | GTTTGCTGTGTAATTAACAC+GGG | - | chr8.3:12778553-12778572 | MS.gene036742:intron | 35.0% |
| !! | TTTAGGGTTTTCTTGGGATT+GGG | + | chr8.3:12775198-12775217 | None:intergenic | 35.0% |
| !! | TTTGATTTGGTAGGAACGAT+GGG | - | chr8.3:12775481-12775500 | MS.gene036742:intron | 35.0% |
| !!! | ACACTTTTTAAGTCCCAAAG+TGG | - | chr8.3:12776972-12776991 | MS.gene036742:CDS | 35.0% |
| !!! | TTTTGATTTGGTAGGAACGA+TGG | - | chr8.3:12775480-12775499 | MS.gene036742:intron | 35.0% |
| !!! | TTTTTAAGTCCCAAAGTGGA+TGG | - | chr8.3:12776976-12776995 | MS.gene036742:CDS | 35.0% |
| AAAACAGAAAGTCTGGTCGA+AGG | - | chr8.3:12779870-12779889 | MS.gene036742:CDS | 40.0% | |
| AAGAAGCAGAAGAGAGGTAA+TGG | - | chr8.3:12779445-12779464 | MS.gene036742:CDS | 40.0% | |
| AAGGACATGCTATTCAGCAT+TGG | - | chr8.3:12778023-12778042 | MS.gene036742:intron | 40.0% | |
| AAGTTGTTACCTTGACCATG+AGG | + | chr8.3:12777348-12777367 | None:intergenic | 40.0% | |
| AGAATTGGAATTAGGGAGAG+AGG | + | chr8.3:12775270-12775289 | None:intergenic | 40.0% | |
| ATACCTGTTCCTCCAAATCA+AGG | + | chr8.3:12779642-12779661 | None:intergenic | 40.0% | |
| ATGAGCTTCCGATTAACCTA+AGG | + | chr8.3:12779393-12779412 | None:intergenic | 40.0% | |
| ATGGCCTAATGTCACACATT+TGG | - | chr8.3:12778704-12778723 | MS.gene036742:CDS | 40.0% | |
| ATTGATCCTGATTCAGTCGA+TGG | + | chr8.3:12778123-12778142 | None:intergenic | 40.0% | |
| ATTTGTGGATTTGTCGGATG+TGG | - | chr8.3:12777821-12777840 | MS.gene036742:intron | 40.0% | |
| CAGGGAAGACTTTAATGCTA+TGG | - | chr8.3:12777976-12777995 | MS.gene036742:intron | 40.0% | |
| CATTCTGCCCTTAGGTTAAT+CGG | - | chr8.3:12779382-12779401 | MS.gene036742:intron | 40.0% | |
| CATTGAAGTCGATGAATGAG+AGG | - | chr8.3:12779614-12779633 | MS.gene036742:intron | 40.0% | |
| CCCAGAAATTCAATGCATTC+TGG | + | chr8.3:12777256-12777275 | None:intergenic | 40.0% | |
| CCGTCTTCTTACATCTCAAT+TGG | - | chr8.3:12778834-12778853 | MS.gene036742:intron | 40.0% | |
| CCTGCTGAGGTAAGTAATAA+CGG | - | chr8.3:12775594-12775613 | MS.gene036742:CDS | 40.0% | |
| CTATGTCTACATGACAGTAC+AGG | + | chr8.3:12778603-12778622 | None:intergenic | 40.0% | |
| CTCTGCGTTCTGTGAATTTA+GGG | + | chr8.3:12775214-12775233 | None:intergenic | 40.0% | |
| CTGAGGTGATTATGATTGTG+TGG | - | chr8.3:12776412-12776431 | MS.gene036742:intron | 40.0% | |
| CTGCTGAGGTAAGTAATAAC+GGG | - | chr8.3:12775595-12775614 | MS.gene036742:CDS | 40.0% | |
| GATGAAGACGATCAAGATAG+TGG | + | chr8.3:12775367-12775386 | None:intergenic | 40.0% | |
| GCCAGAATGCATTGAATTTC+TGG | - | chr8.3:12777252-12777271 | MS.gene036742:CDS | 40.0% | |
| GCTCATGAGCTTAATATCCT+AGG | + | chr8.3:12777125-12777144 | None:intergenic | 40.0% | |
| GGTGAGAGAGAATTGGAATT+AGG | + | chr8.3:12775278-12775297 | None:intergenic | 40.0% | |
| GTCTGGGTTTGTATGATTTG+TGG | - | chr8.3:12777806-12777825 | MS.gene036742:intron | 40.0% | |
| GTGGAACATTAGATGATGTC+TGG | - | chr8.3:12777789-12777808 | MS.gene036742:intron | 40.0% | |
| GTTCACTGTATGTCTCTAGA+AGG | - | chr8.3:12778175-12778194 | MS.gene036742:intron | 40.0% | |
| TCCCAAAGTGGATGGTATAA+AGG | - | chr8.3:12776984-12777003 | MS.gene036742:CDS | 40.0% | |
| TGAAGACGATCAAGATAGTG+GGG | + | chr8.3:12775365-12775384 | None:intergenic | 40.0% | |
| TGAGCTTCCGATTAACCTAA+GGG | + | chr8.3:12779392-12779411 | None:intergenic | 40.0% | |
| TGCGTATTCCACTTGTATCA+GGG | + | chr8.3:12776497-12776516 | None:intergenic | 40.0% | |
| TGTTTACACATCACGTGTGA+CGG | + | chr8.3:12778677-12778696 | None:intergenic | 40.0% | |
| TTCACATTCCGAGTATTCCA+CGG | + | chr8.3:12776252-12776271 | None:intergenic | 40.0% | |
| TTTGCTTTCCGTGGAATACT+CGG | - | chr8.3:12776241-12776260 | MS.gene036742:intron | 40.0% | |
| ! | CTTAGAGCATCATGGGTATT+AGG | - | chr8.3:12776663-12776682 | MS.gene036742:intron | 40.0% |
| ! | TCACTGTATGTCTCTAGAAG+GGG | - | chr8.3:12778177-12778196 | MS.gene036742:intron | 40.0% |
| ! | TCGTGACAAGGTATTCGAAT+TGG | + | chr8.3:12777287-12777306 | None:intergenic | 40.0% |
| ! | TTATGTCCATCGACTGAATC+AGG | - | chr8.3:12778114-12778133 | MS.gene036742:intron | 40.0% |
| ! | TTTCAAGTGAAGTCGTGACA+AGG | + | chr8.3:12777299-12777318 | None:intergenic | 40.0% |
| !! | GAGGTAAGTAATAACGGGTT+TGG | - | chr8.3:12775600-12775619 | MS.gene036742:CDS | 40.0% |
| !! | TCTCTGAAATCGTGGAGTTA+GGG | - | chr8.3:12778294-12778313 | MS.gene036742:intron | 40.0% |
| !! | TTCTCTGAAATCGTGGAGTT+AGG | - | chr8.3:12778293-12778312 | MS.gene036742:intron | 40.0% |
| !!! | CTGTTTTTCTTGCTGTTTCC+AGG | + | chr8.3:12779857-12779876 | None:intergenic | 40.0% |
| !!! | GGTTTTATTGGTAATGCACG+TGG | - | chr8.3:12777657-12777676 | MS.gene036742:intron | 40.0% |
| AAAAGATGCAACATGGGCGA+TGG | - | chr8.3:12777069-12777088 | MS.gene036742:intron | 45.0% | |
| AAAGATGCAACATGGGCGAT+GGG | - | chr8.3:12777070-12777089 | MS.gene036742:intron | 45.0% | |
| AAATCATACCACAGGTGCAC+AGG | + | chr8.3:12778532-12778551 | None:intergenic | 45.0% | |
| ACAAGGAAGGGCGGAAATTA+AGG | - | chr8.3:12777496-12777515 | MS.gene036742:intron | 45.0% | |
| ACATGGGCGATGGGAAAAAA+TGG | - | chr8.3:12777079-12777098 | MS.gene036742:intron | 45.0% | |
| ACCAAGATCCAAGCAAACAG+AGG | + | chr8.3:12776364-12776383 | None:intergenic | 45.0% | |
| AGACACTTCATTCTGCCCTT+AGG | - | chr8.3:12779374-12779393 | MS.gene036742:intron | 45.0% | |
| AGCGACAAGCTCACTTTAAG+TGG | - | chr8.3:12778424-12778443 | MS.gene036742:intron | 45.0% | |
| ATTTCTGTACAACCAGCTGG+AGG | + | chr8.3:12776290-12776309 | None:intergenic | 45.0% | |
| ATTTGGTAGGAACGATGGGA+TGG | - | chr8.3:12775485-12775504 | MS.gene036742:intron | 45.0% | |
| CCAAGATCCAAGCAAACAGA+GGG | + | chr8.3:12776363-12776382 | None:intergenic | 45.0% | |
| CCGTTATTACTTACCTCAGC+AGG | + | chr8.3:12775597-12775616 | None:intergenic | 45.0% | |
| CCTAAATTCACAGAACGCAG+AGG | - | chr8.3:12775212-12775231 | MS.gene036742:CDS | 45.0% | |
| CCTCTGCGTTCTGTGAATTT+AGG | + | chr8.3:12775215-12775234 | None:intergenic | 45.0% | |
| CGCTGTCTTCAATTTCTCTG+AGG | - | chr8.3:12776395-12776414 | MS.gene036742:intron | 45.0% | |
| CGGAATGTGAAGAAGTTGCT+GGG | - | chr8.3:12776261-12776280 | MS.gene036742:intron | 45.0% | |
| CTTCTCCACTGCTTCAGATA+CGG | + | chr8.3:12779230-12779249 | None:intergenic | 45.0% | |
| GAATGAGAGGGTCCTTGATT+TGG | - | chr8.3:12779627-12779646 | MS.gene036742:CDS | 45.0% | |
| GAGAAGAGGTGAGAGAGAAT+TGG | + | chr8.3:12775285-12775304 | None:intergenic | 45.0% | |
| GTGCGTATTCCACTTGTATC+AGG | + | chr8.3:12776498-12776517 | None:intergenic | 45.0% | |
| GTGGACATATTTGTCTTGCC+AGG | - | chr8.3:12776560-12776579 | MS.gene036742:intron | 45.0% | |
| TAGAATTGACGGCAAGTCGA+AGG | - | chr8.3:12778144-12778163 | MS.gene036742:intron | 45.0% | |
| TCGGAATGTGAAGAAGTTGC+TGG | - | chr8.3:12776260-12776279 | MS.gene036742:intron | 45.0% | |
| TGAAACTCACCCAAGCAAAC+TGG | + | chr8.3:12776323-12776342 | None:intergenic | 45.0% | |
| TGTTACCTTGACCATGAGGA+GGG | + | chr8.3:12777344-12777363 | None:intergenic | 45.0% | |
| TGTTTGAATCCCAGAGAGAC+TGG | - | chr8.3:12776470-12776489 | MS.gene036742:intron | 45.0% | |
| TTGAAGCGGTATGTTTCTCG+TGG | - | chr8.3:12778263-12778282 | MS.gene036742:intron | 45.0% | |
| TTGTTACCTTGACCATGAGG+AGG | + | chr8.3:12777345-12777364 | None:intergenic | 45.0% | |
| ! | AACACGGGGCTTTATGCATA+AGG | - | chr8.3:12778568-12778587 | MS.gene036742:intron | 45.0% |
| ! | ACCAACATGTCCAGTTTGCT+TGG | - | chr8.3:12776310-12776329 | MS.gene036742:intron | 45.0% |
| ! | CAAGAAGTTTTCTCCTGCTG+AGG | - | chr8.3:12775581-12775600 | MS.gene036742:CDS | 45.0% |
| ! | CCAACATGTCCAGTTTGCTT+GGG | - | chr8.3:12776311-12776330 | MS.gene036742:intron | 45.0% |
| ! | CTGCCGATTATGTCAACAAC+AGG | - | chr8.3:12777742-12777761 | MS.gene036742:intron | 45.0% |
| ! | GGTATTTCTGTACAACCAGC+TGG | + | chr8.3:12776293-12776312 | None:intergenic | 45.0% |
| ! | TGCTTCGCTAACAAAAGCAC+TGG | - | chr8.3:12777636-12777655 | MS.gene036742:intron | 45.0% |
| !! | ATGTCCACTTTGAGACGCAA+GGG | + | chr8.3:12776548-12776567 | None:intergenic | 45.0% |
| !! | CGCAAGGGCATTGAAATGAA+TGG | + | chr8.3:12776533-12776552 | None:intergenic | 45.0% |
| !! | TATGTCCACTTTGAGACGCA+AGG | + | chr8.3:12776549-12776568 | None:intergenic | 45.0% |
| !! | TTCTTGCTGTTTCCAGGAGA+AGG | + | chr8.3:12779851-12779870 | None:intergenic | 45.0% |
| AACAAAAGCCTGTGCACCTG+TGG | - | chr8.3:12778521-12778540 | MS.gene036742:intron | 50.0% | |
| AAGATGAGTTCGGGATCGAG+TGG | + | chr8.3:12775164-12775183 | None:intergenic | 50.0% | |
| AATGCCCTTGCGTCTCAAAG+TGG | - | chr8.3:12776541-12776560 | MS.gene036742:intron | 50.0% | |
| ACAGAAAGTCTGGTCGAAGG+CGG | - | chr8.3:12779873-12779892 | MS.gene036742:CDS | 50.0% | |
| ACAGCGAGGATGAAGAGAAG+AGG | + | chr8.3:12775299-12775318 | None:intergenic | 50.0% | |
| AGACTGGACCCTGATACAAG+TGG | - | chr8.3:12776486-12776505 | MS.gene036742:intron | 50.0% | |
| ATCGTGACCCTCTGTTTGCT+TGG | - | chr8.3:12776353-12776372 | MS.gene036742:intron | 50.0% | |
| CCCAAGCAAACTGGACATGT+TGG | + | chr8.3:12776314-12776333 | None:intergenic | 50.0% | |
| CCCTCTGTTTGCTTGGATCT+TGG | - | chr8.3:12776360-12776379 | MS.gene036742:intron | 50.0% | |
| GAATGGGGAAGCTACATACC+TGG | + | chr8.3:12776581-12776600 | None:intergenic | 50.0% | |
| GGAACGATGGGATGGAAGAT+AGG | - | chr8.3:12775493-12775512 | MS.gene036742:intron | 50.0% | |
| GTGGATTTGTCGGATGTGGA+AGG | - | chr8.3:12777825-12777844 | MS.gene036742:intron | 50.0% | |
| GTTACCTTGACCATGAGGAG+GGG | + | chr8.3:12777343-12777362 | None:intergenic | 50.0% | |
| TATCAGGGTCCAGTCTCTCT+GGG | + | chr8.3:12776482-12776501 | None:intergenic | 50.0% | |
| TGGAGCGGAGAAGATGAGTT+CGG | + | chr8.3:12775174-12775193 | None:intergenic | 50.0% | |
| TTACCTTGACCATGAGGAGG+GGG | + | chr8.3:12777342-12777361 | None:intergenic | 50.0% | |
| ! | AAGCTCCGTATCTGAAGCAG+TGG | - | chr8.3:12779222-12779241 | MS.gene036742:intron | 50.0% |
| ! | CGTATCTGAAGCAGTGGAGA+AGG | - | chr8.3:12779228-12779247 | MS.gene036742:intron | 50.0% |
| ! | GGGTTTTCTTGGGATTGGGT+TGG | + | chr8.3:12775194-12775213 | None:intergenic | 50.0% |
| !! | GGTCCTTGATTTGGAGGAAC+AGG | - | chr8.3:12779636-12779655 | MS.gene036742:CDS | 50.0% |
| !! | TCAATGCATTCTGGCTCGCT+TGG | + | chr8.3:12777247-12777266 | None:intergenic | 50.0% |
| !! | TGAGAGGGTCCTTGATTTGG+AGG | - | chr8.3:12779630-12779649 | MS.gene036742:CDS | 50.0% |
| !! | TTCTTGGGATTGGGTTGGAG+CGG | + | chr8.3:12775189-12775208 | None:intergenic | 50.0% |
| GAAGGTTGCTCATGAGCCAC+TGG | + | chr8.3:12779833-12779852 | None:intergenic | 55.0% | |
| GCTCATGAGCAACCTTCTCC+TGG | - | chr8.3:12779836-12779855 | MS.gene036742:CDS | 55.0% | |
| GGAGCGGAGAAGATGAGTTC+GGG | + | chr8.3:12775173-12775192 | None:intergenic | 55.0% | |
| GGAGGGAACAGTCTTACCAG+TGG | - | chr8.3:12779814-12779833 | MS.gene036742:CDS | 55.0% | |
| GTATCAGGGTCCAGTCTCTC+TGG | + | chr8.3:12776483-12776502 | None:intergenic | 55.0% | |
| GTGGAGAAGGCTGCAACTTC+TGG | - | chr8.3:12779241-12779260 | MS.gene036742:intron | 55.0% | |
| TACCTTGACCATGAGGAGGG+GGG | + | chr8.3:12777341-12777360 | None:intergenic | 55.0% | |
| ! | GAGAGGAGTGTGAAGCGCTT+CGG | + | chr8.3:12775253-12775272 | None:intergenic | 55.0% |
| ! | GATTCTCGTCGTCGACTGAG+TGG | + | chr8.3:12775142-12775161 | None:intergenic | 55.0% |
| GGCTGCAACTTCTGGCATGC+TGG | - | chr8.3:12779249-12779268 | MS.gene036742:intron | 60.0% | |
| ! | CGTCGTCGACTGAGTGGACT+CGG | + | chr8.3:12775136-12775155 | None:intergenic | 60.0% |
| CACCCCCCTCCTCATGGTCA+AGG | - | chr8.3:12777336-12777355 | MS.gene036742:intron | 65.0% | |
| CCTTTGCACCCCCCTCCTCA+TGG | - | chr8.3:12777330-12777349 | MS.gene036742:intron | 65.0% | |
| GTCTGGTCGAAGGCGGCGTT+AGG | - | chr8.3:12779880-12779899 | MS.gene036742:CDS | 65.0% | |
| GTTGCTGGGACTCCTCCAGC+TGG | - | chr8.3:12776275-12776294 | MS.gene036742:intron | 65.0% | |
| ! | AGGAGGGGGGTGCAAAGGCA+AGG | + | chr8.3:12777328-12777347 | None:intergenic | 65.0% |
| ! | CCATGAGGAGGGGGGTGCAA+AGG | + | chr8.3:12777333-12777352 | None:intergenic | 65.0% |
| ! | CGTCGACTGAGTGGACTCGG+AGG | + | chr8.3:12775133-12775152 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.3 | gene | 12775122 | 12779901 | 12775122 | ID=MS.gene036742 |
| chr8.3 | mRNA | 12775122 | 12779901 | 12775122 | ID=MS.gene036742.t1;Parent=MS.gene036742 |
| chr8.3 | exon | 12779621 | 12779901 | 12779621 | ID=MS.gene036742.t1.exon1;Parent=MS.gene036742.t1 |
| chr8.3 | CDS | 12779621 | 12779901 | 12779621 | ID=cds.MS.gene036742.t1;Parent=MS.gene036742.t1 |
| chr8.3 | exon | 12779421 | 12779529 | 12779421 | ID=MS.gene036742.t1.exon2;Parent=MS.gene036742.t1 |
| chr8.3 | CDS | 12779421 | 12779529 | 12779421 | ID=cds.MS.gene036742.t1;Parent=MS.gene036742.t1 |
| chr8.3 | exon | 12778691 | 12778805 | 12778691 | ID=MS.gene036742.t1.exon3;Parent=MS.gene036742.t1 |
| chr8.3 | CDS | 12778691 | 12778805 | 12778691 | ID=cds.MS.gene036742.t1;Parent=MS.gene036742.t1 |
| chr8.3 | exon | 12778442 | 12778539 | 12778442 | ID=MS.gene036742.t1.exon4;Parent=MS.gene036742.t1 |
| chr8.3 | CDS | 12778442 | 12778539 | 12778442 | ID=cds.MS.gene036742.t1;Parent=MS.gene036742.t1 |
| chr8.3 | exon | 12777177 | 12777283 | 12777177 | ID=MS.gene036742.t1.exon5;Parent=MS.gene036742.t1 |
| chr8.3 | CDS | 12777177 | 12777283 | 12777177 | ID=cds.MS.gene036742.t1;Parent=MS.gene036742.t1 |
| chr8.3 | exon | 12776753 | 12777008 | 12776753 | ID=MS.gene036742.t1.exon6;Parent=MS.gene036742.t1 |
| chr8.3 | CDS | 12776753 | 12777008 | 12776753 | ID=cds.MS.gene036742.t1;Parent=MS.gene036742.t1 |
| chr8.3 | exon | 12776153 | 12776206 | 12776153 | ID=MS.gene036742.t1.exon7;Parent=MS.gene036742.t1 |
| chr8.3 | CDS | 12776153 | 12776206 | 12776153 | ID=cds.MS.gene036742.t1;Parent=MS.gene036742.t1 |
| chr8.3 | exon | 12775699 | 12775842 | 12775699 | ID=MS.gene036742.t1.exon8;Parent=MS.gene036742.t1 |
| chr8.3 | CDS | 12775699 | 12775842 | 12775699 | ID=cds.MS.gene036742.t1;Parent=MS.gene036742.t1 |
| chr8.3 | exon | 12775563 | 12775627 | 12775563 | ID=MS.gene036742.t1.exon9;Parent=MS.gene036742.t1 |
| chr8.3 | CDS | 12775563 | 12775627 | 12775563 | ID=cds.MS.gene036742.t1;Parent=MS.gene036742.t1 |
| chr8.3 | exon | 12775366 | 12775420 | 12775366 | ID=MS.gene036742.t1.exon10;Parent=MS.gene036742.t1 |
| chr8.3 | CDS | 12775366 | 12775420 | 12775366 | ID=cds.MS.gene036742.t1;Parent=MS.gene036742.t1 |
| chr8.3 | exon | 12775122 | 12775280 | 12775122 | ID=MS.gene036742.t1.exon11;Parent=MS.gene036742.t1 |
| chr8.3 | CDS | 12775122 | 12775280 | 12775122 | ID=cds.MS.gene036742.t1;Parent=MS.gene036742.t1 |
| Gene Sequence |
| Protein sequence |
