Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85936.t1 | XP_024633303.1 | 92.3 | 379 | 2 | 1 | 1 | 352 | 68 | 446 | 1.30E-197 | 698.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85936.t1 | O80996 | 61.4 | 386 | 113 | 6 | 1 | 352 | 71 | 454 | 3.2e-131 | 469.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85936.t1 | A0A396JH02 | 92.3 | 379 | 2 | 1 | 1 | 352 | 68 | 446 | 9.7e-198 | 698.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049142 | MS.gene85936 | 0.820365 | 7.13E-53 | -1.69E-46 |
| MS.gene049159 | MS.gene85936 | 0.800986 | 1.11E-48 | -1.69E-46 |
| MS.gene04918 | MS.gene85936 | 0.858751 | 6.64E-63 | -1.69E-46 |
| MS.gene04919 | MS.gene85936 | 0.825462 | 4.63E-54 | -1.69E-46 |
| MS.gene04920 | MS.gene85936 | 0.850296 | 1.86E-60 | -1.69E-46 |
| MS.gene049254 | MS.gene85936 | 0.831633 | 1.49E-55 | -1.69E-46 |
| MS.gene049283 | MS.gene85936 | 0.859727 | 3.39E-63 | -1.69E-46 |
| MS.gene049368 | MS.gene85936 | 0.851755 | 7.22E-61 | -1.69E-46 |
| MS.gene049419 | MS.gene85936 | -0.836538 | 8.83E-57 | -1.69E-46 |
| MS.gene049452 | MS.gene85936 | 0.835583 | 1.54E-56 | -1.69E-46 |
| MS.gene049499 | MS.gene85936 | 0.862956 | 3.51E-64 | -1.69E-46 |
| MS.gene049983 | MS.gene85936 | 0.871345 | 7.33E-67 | -1.69E-46 |
| MS.gene050414 | MS.gene85936 | 0.812609 | 3.89E-51 | -1.69E-46 |
| MS.gene050559 | MS.gene85936 | 0.81531 | 9.87E-52 | -1.69E-46 |
| MS.gene050561 | MS.gene85936 | 0.808196 | 3.49E-50 | -1.69E-46 |
| MS.gene050571 | MS.gene85936 | 0.821729 | 3.46E-53 | -1.69E-46 |
| MS.gene050646 | MS.gene85936 | 0.826282 | 2.96E-54 | -1.69E-46 |
| MS.gene050654 | MS.gene85936 | 0.841025 | 6.10E-58 | -1.69E-46 |
| MS.gene050941 | MS.gene85936 | 0.804884 | 1.74E-49 | -1.69E-46 |
| MS.gene050945 | MS.gene85936 | 0.806942 | 6.44E-50 | -1.69E-46 |
| MS.gene051003 | MS.gene85936 | 0.804386 | 2.21E-49 | -1.69E-46 |
| MS.gene051332 | MS.gene85936 | 0.814491 | 1.50E-51 | -1.69E-46 |
| MS.gene051343 | MS.gene85936 | 0.806721 | 7.17E-50 | -1.69E-46 |
| MS.gene051363 | MS.gene85936 | 0.833264 | 5.89E-56 | -1.69E-46 |
| MS.gene051365 | MS.gene85936 | 0.814053 | 1.87E-51 | -1.69E-46 |
| MS.gene051368 | MS.gene85936 | 0.819752 | 9.85E-53 | -1.69E-46 |
| MS.gene051597 | MS.gene85936 | 0.817869 | 2.64E-52 | -1.69E-46 |
| MS.gene051637 | MS.gene85936 | 0.811621 | 6.39E-51 | -1.69E-46 |
| MS.gene051676 | MS.gene85936 | 0.805211 | 1.49E-49 | -1.69E-46 |
| MS.gene051699 | MS.gene85936 | 0.80775 | 4.34E-50 | -1.69E-46 |
| MS.gene051744 | MS.gene85936 | 0.82845 | 8.93E-55 | -1.69E-46 |
| MS.gene05188 | MS.gene85936 | 0.810111 | 1.36E-50 | -1.69E-46 |
| MS.gene051975 | MS.gene85936 | 0.841131 | 5.72E-58 | -1.69E-46 |
| MS.gene052072 | MS.gene85936 | 0.815932 | 7.18E-52 | -1.69E-46 |
| MS.gene052108 | MS.gene85936 | 0.817793 | 2.74E-52 | -1.69E-46 |
| MS.gene052118 | MS.gene85936 | 0.83176 | 1.39E-55 | -1.69E-46 |
| MS.gene052463 | MS.gene85936 | 0.829631 | 4.62E-55 | -1.69E-46 |
| MS.gene052518 | MS.gene85936 | 0.848416 | 6.22E-60 | -1.69E-46 |
| MS.gene052519 | MS.gene85936 | 0.832517 | 9.04E-56 | -1.69E-46 |
| MS.gene052533 | MS.gene85936 | 0.811519 | 6.72E-51 | -1.69E-46 |
| MS.gene052534 | MS.gene85936 | 0.817886 | 2.61E-52 | -1.69E-46 |
| MS.gene052582 | MS.gene85936 | 0.817252 | 3.63E-52 | -1.69E-46 |
| MS.gene052584 | MS.gene85936 | 0.812365 | 4.40E-51 | -1.69E-46 |
| MS.gene052674 | MS.gene85936 | 0.800842 | 1.19E-48 | -1.69E-46 |
| MS.gene052685 | MS.gene85936 | 0.826433 | 2.72E-54 | -1.69E-46 |
| MS.gene052773 | MS.gene85936 | 0.807691 | 4.47E-50 | -1.69E-46 |
| MS.gene052855 | MS.gene85936 | 0.810025 | 1.42E-50 | -1.69E-46 |
| MS.gene052889 | MS.gene85936 | 0.804232 | 2.38E-49 | -1.69E-46 |
| MS.gene052954 | MS.gene85936 | 0.824047 | 9.97E-54 | -1.69E-46 |
| MS.gene053006 | MS.gene85936 | 0.812373 | 4.38E-51 | -1.69E-46 |
| MS.gene053079 | MS.gene85936 | 0.802707 | 4.94E-49 | -1.69E-46 |
| MS.gene05308 | MS.gene85936 | 0.816887 | 4.39E-52 | -1.69E-46 |
| MS.gene053226 | MS.gene85936 | 0.829397 | 5.27E-55 | -1.69E-46 |
| MS.gene053272 | MS.gene85936 | -0.826875 | 2.13E-54 | -1.69E-46 |
| MS.gene053298 | MS.gene85936 | 0.831172 | 1.94E-55 | -1.69E-46 |
| MS.gene053321 | MS.gene85936 | 0.808908 | 2.46E-50 | -1.69E-46 |
| MS.gene05350 | MS.gene85936 | 0.822109 | 2.82E-53 | -1.69E-46 |
| MS.gene053931 | MS.gene85936 | 0.847803 | 9.17E-60 | -1.69E-46 |
| MS.gene053963 | MS.gene85936 | 0.833962 | 3.94E-56 | -1.69E-46 |
| MS.gene054222 | MS.gene85936 | 0.811527 | 6.69E-51 | -1.69E-46 |
| MS.gene054236 | MS.gene85936 | 0.810986 | 8.78E-51 | -1.69E-46 |
| MS.gene054479 | MS.gene85936 | 0.846003 | 2.85E-59 | -1.69E-46 |
| MS.gene054576 | MS.gene85936 | 0.809034 | 2.31E-50 | -1.69E-46 |
| MS.gene05458 | MS.gene85936 | 0.845425 | 4.09E-59 | -1.69E-46 |
| MS.gene054651 | MS.gene85936 | 0.844546 | 7.07E-59 | -1.69E-46 |
| MS.gene054892 | MS.gene85936 | 0.857097 | 2.06E-62 | -1.69E-46 |
| MS.gene054893 | MS.gene85936 | 0.860065 | 2.68E-63 | -1.69E-46 |
| MS.gene054957 | MS.gene85936 | 0.820852 | 5.51E-53 | -1.69E-46 |
| MS.gene05517 | MS.gene85936 | 0.807268 | 5.49E-50 | -1.69E-46 |
| MS.gene055222 | MS.gene85936 | 0.810113 | 1.35E-50 | -1.69E-46 |
| MS.gene055513 | MS.gene85936 | 0.828834 | 7.21E-55 | -1.69E-46 |
| MS.gene055586 | MS.gene85936 | 0.812627 | 3.85E-51 | -1.69E-46 |
| MS.gene055724 | MS.gene85936 | 0.800462 | 1.43E-48 | -1.69E-46 |
| MS.gene055841 | MS.gene85936 | 0.840652 | 7.64E-58 | -1.69E-46 |
| MS.gene055864 | MS.gene85936 | 0.807109 | 5.93E-50 | -1.69E-46 |
| MS.gene056045 | MS.gene85936 | 0.823335 | 1.46E-53 | -1.69E-46 |
| MS.gene056174 | MS.gene85936 | 0.814565 | 1.44E-51 | -1.69E-46 |
| MS.gene056215 | MS.gene85936 | 0.808695 | 2.73E-50 | -1.69E-46 |
| MS.gene056509 | MS.gene85936 | 0.806331 | 8.67E-50 | -1.69E-46 |
| MS.gene056699 | MS.gene85936 | 0.835393 | 1.72E-56 | -1.69E-46 |
| MS.gene056776 | MS.gene85936 | 0.827297 | 1.69E-54 | -1.69E-46 |
| MS.gene056834 | MS.gene85936 | 0.812341 | 4.45E-51 | -1.69E-46 |
| MS.gene05686 | MS.gene85936 | 0.867613 | 1.20E-65 | -1.69E-46 |
| MS.gene05689 | MS.gene85936 | 0.801802 | 7.58E-49 | -1.69E-46 |
| MS.gene05690 | MS.gene85936 | 0.820006 | 8.62E-53 | -1.69E-46 |
| MS.gene056973 | MS.gene85936 | 0.837117 | 6.28E-57 | -1.69E-46 |
| MS.gene056986 | MS.gene85936 | 0.833147 | 6.30E-56 | -1.69E-46 |
| MS.gene057034 | MS.gene85936 | 0.831968 | 1.24E-55 | -1.69E-46 |
| MS.gene057102 | MS.gene85936 | 0.837394 | 5.33E-57 | -1.69E-46 |
| MS.gene057155 | MS.gene85936 | 0.805253 | 1.46E-49 | -1.69E-46 |
| MS.gene057208 | MS.gene85936 | 0.885045 | 1.14E-71 | -1.69E-46 |
| MS.gene057371 | MS.gene85936 | 0.815188 | 1.05E-51 | -1.69E-46 |
| MS.gene057598 | MS.gene85936 | 0.835372 | 1.74E-56 | -1.69E-46 |
| MS.gene057611 | MS.gene85936 | 0.809128 | 2.20E-50 | -1.69E-46 |
| MS.gene058008 | MS.gene85936 | 0.824863 | 6.41E-54 | -1.69E-46 |
| MS.gene058009 | MS.gene85936 | 0.829157 | 6.02E-55 | -1.69E-46 |
| MS.gene058010 | MS.gene85936 | 0.806511 | 7.94E-50 | -1.69E-46 |
| MS.gene058081 | MS.gene85936 | 0.827924 | 1.20E-54 | -1.69E-46 |
| MS.gene058095 | MS.gene85936 | 0.804574 | 2.02E-49 | -1.69E-46 |
| MS.gene058159 | MS.gene85936 | 0.83966 | 1.39E-57 | -1.69E-46 |
| MS.gene058279 | MS.gene85936 | 0.83215 | 1.11E-55 | -1.69E-46 |
| MS.gene058292 | MS.gene85936 | 0.819045 | 1.43E-52 | -1.69E-46 |
| MS.gene058355 | MS.gene85936 | 0.807013 | 6.22E-50 | -1.69E-46 |
| MS.gene058427 | MS.gene85936 | 0.808555 | 2.92E-50 | -1.69E-46 |
| MS.gene058429 | MS.gene85936 | 0.811666 | 6.25E-51 | -1.69E-46 |
| MS.gene058592 | MS.gene85936 | 0.805105 | 1.57E-49 | -1.69E-46 |
| MS.gene058781 | MS.gene85936 | 0.859658 | 3.55E-63 | -1.69E-46 |
| MS.gene058783 | MS.gene85936 | 0.858736 | 6.71E-63 | -1.69E-46 |
| MS.gene058979 | MS.gene85936 | 0.825052 | 5.79E-54 | -1.69E-46 |
| MS.gene05897 | MS.gene85936 | 0.815521 | 8.86E-52 | -1.69E-46 |
| MS.gene059146 | MS.gene85936 | 0.837418 | 5.26E-57 | -1.69E-46 |
| MS.gene059170 | MS.gene85936 | 0.804198 | 2.42E-49 | -1.69E-46 |
| MS.gene05952 | MS.gene85936 | 0.837501 | 5.01E-57 | -1.69E-46 |
| MS.gene059842 | MS.gene85936 | 0.803083 | 4.13E-49 | -1.69E-46 |
| MS.gene05985 | MS.gene85936 | -0.850575 | 1.55E-60 | -1.69E-46 |
| MS.gene059901 | MS.gene85936 | -0.802657 | 5.06E-49 | -1.69E-46 |
| MS.gene060244 | MS.gene85936 | 0.815375 | 9.55E-52 | -1.69E-46 |
| MS.gene060259 | MS.gene85936 | 0.828003 | 1.14E-54 | -1.69E-46 |
| MS.gene060365 | MS.gene85936 | 0.81167 | 6.23E-51 | -1.69E-46 |
| MS.gene060412 | MS.gene85936 | 0.801037 | 1.09E-48 | -1.69E-46 |
| MS.gene060435 | MS.gene85936 | 0.844676 | 6.52E-59 | -1.69E-46 |
| MS.gene060527 | MS.gene85936 | 0.86765 | 1.17E-65 | -1.69E-46 |
| MS.gene060777 | MS.gene85936 | 0.823429 | 1.39E-53 | -1.69E-46 |
| MS.gene060932 | MS.gene85936 | 0.818622 | 1.78E-52 | -1.69E-46 |
| MS.gene060933 | MS.gene85936 | 0.859898 | 3.01E-63 | -1.69E-46 |
| MS.gene060935 | MS.gene85936 | 0.889175 | 3.07E-73 | -1.69E-46 |
| MS.gene060937 | MS.gene85936 | 0.892782 | 1.16E-74 | -1.69E-46 |
| MS.gene061100 | MS.gene85936 | 0.823676 | 1.22E-53 | -1.69E-46 |
| MS.gene061160 | MS.gene85936 | 0.802443 | 5.60E-49 | -1.69E-46 |
| MS.gene061188 | MS.gene85936 | 0.829136 | 6.09E-55 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene85936 | MS.gene036742 | PPI |
| MS.gene85936 | MS.gene59964 | PPI |
| MS.gene85936 | MS.gene60149 | PPI |
| MS.gene85936 | MS.gene59963 | PPI |
| MS.gene85936 | MS.gene060812 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85936.t1 | MTR_2g104600 | 91.530 | 366 | 4 | 1 | 14 | 352 | 51 | 416 | 0.0 | 683 |
| MS.gene85936.t1 | MTR_2g104600 | 89.429 | 350 | 18 | 2 | 1 | 350 | 68 | 398 | 0.0 | 632 |
| MS.gene85936.t1 | MTR_4g114970 | 45.361 | 388 | 173 | 7 | 1 | 351 | 70 | 455 | 4.32e-114 | 340 |
| MS.gene85936.t1 | MTR_4g114970 | 47.040 | 321 | 134 | 6 | 1 | 286 | 70 | 389 | 1.52e-96 | 293 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene85936.t1 | AT2G26000 | 62.602 | 369 | 102 | 4 | 1 | 334 | 71 | 438 | 3.39e-169 | 480 |
| MS.gene85936.t1 | AT2G26000 | 62.602 | 369 | 102 | 4 | 1 | 334 | 71 | 438 | 3.39e-169 | 480 |
| MS.gene85936.t1 | AT2G26000 | 59.079 | 369 | 97 | 5 | 1 | 334 | 71 | 420 | 1.97e-155 | 444 |
| MS.gene85936.t1 | AT2G42160 | 44.241 | 382 | 177 | 4 | 1 | 349 | 81 | 459 | 6.87e-112 | 335 |
| MS.gene85936.t1 | AT2G42160 | 45.179 | 363 | 165 | 3 | 1 | 330 | 81 | 442 | 1.00e-109 | 328 |
| MS.gene85936.t1 | AT2G42160 | 45.652 | 322 | 141 | 3 | 1 | 289 | 81 | 401 | 4.51e-97 | 294 |
Find 68 sgRNAs with CRISPR-Local
Find 212 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGTTCTACTTGTTGTAATA+AGG | 0.203104 | 2.1:+1326146 | None:intergenic |
| ACGTTAGATGTGCAGTATAC+TGG | 0.232482 | 2.1:-1327942 | MS.gene85936:CDS |
| CGTTTCTTTCCAGTGTATTA+TGG | 0.244965 | 2.1:+1326749 | None:intergenic |
| AACTAACTTCCCATCAGTTT+TGG | 0.267305 | 2.1:+1326644 | None:intergenic |
| TAACAAAGAGAAGAAGTTTC+TGG | 0.277286 | 2.1:-1326040 | MS.gene85936:CDS |
| AACCTCATGGTTTGTCTTGA+GGG | 0.281710 | 2.1:-1325294 | MS.gene85936:CDS |
| ACGCTTAGTTTCCACTTCTA+AGG | 0.286554 | 2.1:+1326713 | None:intergenic |
| TCGTCTTGATTCAGATATAA+AGG | 0.340162 | 2.1:-1326780 | MS.gene85936:intron |
| AAGTGGAAACTAAGCGTGTC+TGG | 0.346083 | 2.1:-1326707 | MS.gene85936:CDS |
| TGAAATGCGTATTGTTAGAA+TGG | 0.371128 | 2.1:-1328408 | MS.gene85936:CDS |
| ATTGCTCCTGTATTTCGAAA+TGG | 0.378523 | 2.1:-1327305 | MS.gene85936:CDS |
| GTCAAACCACTGAGAACCTT+TGG | 0.385240 | 2.1:-1326952 | MS.gene85936:CDS |
| CTCTTCAATCTCAAGTAACT+TGG | 0.391711 | 2.1:+1325740 | None:intergenic |
| TCTCAAACAGCATAAGATTC+AGG | 0.394917 | 2.1:-1326079 | MS.gene85936:CDS |
| TGCAATGTACCAAGGCAAAC+TGG | 0.398866 | 2.1:+1327864 | None:intergenic |
| CTTTAAAGCTGACTACTGAT+AGG | 0.411800 | 2.1:-1325490 | MS.gene85936:CDS |
| ATCTGCCCATTTCGAAATAC+AGG | 0.412417 | 2.1:+1327299 | None:intergenic |
| TGTGTTATATGTGGGTTTGT+TGG | 0.419958 | 2.1:-1326926 | MS.gene85936:CDS |
| TAACCTCATGGTTTGTCTTG+AGG | 0.435978 | 2.1:-1325295 | MS.gene85936:CDS |
| TTGCTCCTGTATTTCGAAAT+GGG | 0.440003 | 2.1:-1327304 | MS.gene85936:CDS |
| CGTTAGATGTGCAGTATACT+GGG | 0.458930 | 2.1:-1327941 | MS.gene85936:CDS |
| CTTTGGATATGTGTTATATG+TGG | 0.462563 | 2.1:-1326935 | MS.gene85936:CDS |
| ATATGTGGGTTTGTTGGCTG+TGG | 0.470616 | 2.1:-1326920 | MS.gene85936:CDS |
| CATTTGCATTTGACAATGGC+GGG | 0.494770 | 2.1:+1325253 | None:intergenic |
| GTGGGTTTGTTGGCTGTGGA+AGG | 0.501678 | 2.1:-1326916 | MS.gene85936:intron |
| CTTATTCAGTCCAAAACTGA+TGG | 0.502793 | 2.1:-1326654 | MS.gene85936:CDS |
| CAGCTTGTTGTTGGCAATAG+CGG | 0.506033 | 2.1:+1326996 | None:intergenic |
| CCATTGTCAAATGCAAATGA+TGG | 0.510740 | 2.1:-1325249 | MS.gene85936:CDS |
| CCATCATTTGCATTTGACAA+TGG | 0.524558 | 2.1:+1325249 | None:intergenic |
| AGAGAAGAAGTTTCTGGATG+AGG | 0.524969 | 2.1:-1326034 | MS.gene85936:intron |
| CTGTTCAGTTGAAGTAGCAT+TGG | 0.526346 | 2.1:+1327896 | None:intergenic |
| GCATTGCTATTCCTTAGAAG+TGG | 0.532695 | 2.1:-1326724 | MS.gene85936:CDS |
| AACACTGTAACGATCTTCCA+TGG | 0.534895 | 2.1:+1328382 | None:intergenic |
| ATGGAAAGAATGATTGCATA+TGG | 0.537548 | 2.1:+1327326 | None:intergenic |
| TTGTCTTGAGGGTGGGAAGA+CGG | 0.545167 | 2.1:-1325283 | MS.gene85936:CDS |
| TCATGGTTTGTCTTGAGGGT+GGG | 0.549592 | 2.1:-1325290 | MS.gene85936:CDS |
| TTTAAAGCTGACTACTGATA+GGG | 0.560293 | 2.1:-1325489 | MS.gene85936:CDS |
| CTCATGGTTTGTCTTGAGGG+TGG | 0.560470 | 2.1:-1325291 | MS.gene85936:CDS |
| GGTAACGGACCTAGAAAAGC+AGG | 0.564937 | 2.1:-1325468 | MS.gene85936:intron |
| TCATTTGCATTTGACAATGG+CGG | 0.564960 | 2.1:+1325252 | None:intergenic |
| TTTGGATATGTGTTATATGT+GGG | 0.567381 | 2.1:-1326934 | MS.gene85936:CDS |
| AGTGGAAACTAAGCGTGTCT+GGG | 0.576313 | 2.1:-1326706 | MS.gene85936:CDS |
| CATGCAGACAGTGGCAGCTG+TGG | 0.578082 | 2.1:-1326600 | MS.gene85936:CDS |
| GACAGCCTTCTGAACTGCTA+CGG | 0.578151 | 2.1:+1326104 | None:intergenic |
| CCTACATGTCCAGTTTGCCT+TGG | 0.578352 | 2.1:-1327873 | MS.gene85936:intron |
| TATTGTTAGAATGGAATCCA+TGG | 0.580258 | 2.1:-1328399 | MS.gene85936:CDS |
| ATTTCGAAATACAGGAGCAA+TGG | 0.582318 | 2.1:+1327307 | None:intergenic |
| AATTTCCGTAGCAGTTCAGA+AGG | 0.584911 | 2.1:-1326109 | MS.gene85936:CDS |
| ATTAAGTATAGCCTCTCTCA+TGG | 0.586613 | 2.1:+1326569 | None:intergenic |
| ACTTAATAGTAAAGTTGAAG+CGG | 0.592740 | 2.1:-1326553 | MS.gene85936:intron |
| TGTACAGCTTAGTAACCTCA+TGG | 0.595808 | 2.1:-1325307 | MS.gene85936:intron |
| TCAGTTGAAGTAGCATTGGA+TGG | 0.603843 | 2.1:+1327900 | None:intergenic |
| TGGAGATAATGCCATGAGAG+AGG | 0.611254 | 2.1:-1326580 | MS.gene85936:CDS |
| CACATATAACACATATCCAA+AGG | 0.611792 | 2.1:+1326936 | None:intergenic |
| CCAAGGCAAACTGGACATGT+AGG | 0.620789 | 2.1:+1327873 | None:intergenic |
| TTATTCAGTCCAAAACTGAT+GGG | 0.621299 | 2.1:-1326653 | MS.gene85936:CDS |
| AAGCGTGTCTGGGATTATGT+CGG | 0.621807 | 2.1:-1326696 | MS.gene85936:CDS |
| CACTGTGTGCATGCAGACAG+TGG | 0.626099 | 2.1:-1326609 | MS.gene85936:CDS |
| GAGGACATGCCATAATACAC+TGG | 0.626852 | 2.1:-1326758 | MS.gene85936:CDS |
| CAAGTAGAACAAGAAACTGA+AGG | 0.630137 | 2.1:-1326135 | MS.gene85936:CDS |
| CGATTAGATCAAGACACGAG+TGG | 0.641720 | 2.1:-1327360 | MS.gene85936:CDS |
| GCTGACTACTGATAGGGTAA+CGG | 0.644609 | 2.1:-1325483 | MS.gene85936:CDS |
| ACCAAATCACATGACTTATG+CGG | 0.656198 | 2.1:-1328471 | None:intergenic |
| CATCTAACGTGAAAACAACA+CGG | 0.674739 | 2.1:+1327955 | None:intergenic |
| ACATATCCAAAGGTTCTCAG+TGG | 0.687079 | 2.1:+1326946 | None:intergenic |
| TCTTGATTCAGATATAAAGG+AGG | 0.704220 | 2.1:-1326777 | MS.gene85936:intron |
| AGTTACTTGAGATTGAAGAG+AGG | 0.724626 | 2.1:-1325737 | MS.gene85936:intron |
| CACCCTCAAGACAAACCATG+AGG | 0.740508 | 2.1:+1325292 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATACTACAATTAAAAAA+AGG | + | chr2.1:1327527-1327546 | None:intergenic | 10.0% |
| !! | AAATACTACAATTAAAAAAA+GGG | + | chr2.1:1327526-1327545 | None:intergenic | 10.0% |
| !! | AATGAAAGAATTTAACAAAA+GGG | + | chr2.1:1326828-1326847 | None:intergenic | 15.0% |
| !!! | GATATACTACTTTTTTTTAA+TGG | + | chr2.1:1327837-1327856 | None:intergenic | 15.0% |
| !!! | TATAAATACTATTTTGAGAA+CGG | + | chr2.1:1327997-1328016 | None:intergenic | 15.0% |
| !!! | TGATGTATCTTTTTTTTTTT+TGG | - | chr2.1:1327209-1327228 | MS.gene85936:intron | 15.0% |
| !!! | TTTTCTCTTTTAATTGTATT+TGG | - | chr2.1:1326863-1326882 | MS.gene85936:intron | 15.0% |
| !! | AAAAAAAGTAGTATATCACA+AGG | - | chr2.1:1327840-1327859 | MS.gene85936:intron | 20.0% |
| !! | ACAATTAAAAGAGAAAAGAA+AGG | + | chr2.1:1326860-1326879 | None:intergenic | 20.0% |
| !! | ACCATAAAATAGAATAGAAT+GGG | + | chr2.1:1325439-1325458 | None:intergenic | 20.0% |
| !! | ATAAACTACATTACATTAGA+AGG | + | chr2.1:1325900-1325919 | None:intergenic | 20.0% |
| !! | ATTAATAGTAGTATATCACA+AGG | - | chr2.1:1327801-1327820 | MS.gene85936:intron | 20.0% |
| !! | CAATGAAAGAATTTAACAAA+AGG | + | chr2.1:1326829-1326848 | None:intergenic | 20.0% |
| !! | TACCATAAAATAGAATAGAA+TGG | + | chr2.1:1325440-1325459 | None:intergenic | 20.0% |
| !! | TTAGTATGAATATTCTTGAA+CGG | + | chr2.1:1328336-1328355 | None:intergenic | 20.0% |
| !!! | ACTTTTTACATTTAGTTTCA+TGG | + | chr2.1:1328036-1328055 | None:intergenic | 20.0% |
| !!! | ATCTTTTTTTTTTTTGGTAG+TGG | - | chr2.1:1327215-1327234 | MS.gene85936:intron | 20.0% |
| !!! | CTTTTTACATTTAGTTTCAT+GGG | + | chr2.1:1328035-1328054 | None:intergenic | 20.0% |
| ! | AAAGAATTTAACAAAAGGGT+TGG | + | chr2.1:1326824-1326843 | None:intergenic | 25.0% |
| ! | AAATAGGCAAAAGAAAACAT+GGG | + | chr2.1:1325568-1325587 | None:intergenic | 25.0% |
| ! | AAGAATTTAACAAAAGGGTT+GGG | + | chr2.1:1326823-1326842 | None:intergenic | 25.0% |
| ! | AATAATTATAGCCATGTCAT+AGG | - | chr2.1:1327765-1327784 | MS.gene85936:intron | 25.0% |
| ! | AATTCTCCAAAAGTAGTTAT+AGG | + | chr2.1:1326098-1326117 | None:intergenic | 25.0% |
| ! | ACAACTTGAAAACCAAAAAT+TGG | - | chr2.1:1327423-1327442 | MS.gene85936:intron | 25.0% |
| ! | ACAATGCATAAAAATATGCA+AGG | + | chr2.1:1327260-1327279 | None:intergenic | 25.0% |
| ! | ACTTAATAGTAAAGTTGAAG+CGG | - | chr2.1:1327144-1327163 | MS.gene85936:intron | 25.0% |
| ! | ATGAGAAGATGATGTTATAT+AGG | - | chr2.1:1326470-1326489 | MS.gene85936:intron | 25.0% |
| ! | ATTCTCCAAAAGTAGTTATA+GGG | + | chr2.1:1326097-1326116 | None:intergenic | 25.0% |
| ! | TGACAATCTGTAAAAGAAAA+TGG | + | chr2.1:1327378-1327397 | None:intergenic | 25.0% |
| ! | TGAGAAGATGATGTTATATA+GGG | - | chr2.1:1326471-1326490 | MS.gene85936:intron | 25.0% |
| ! | TTTGGATATGTGTTATATGT+GGG | - | chr2.1:1326763-1326782 | MS.gene85936:CDS | 25.0% |
| !! | TATTCTTTTTGACAAAGACA+TGG | + | chr2.1:1327746-1327765 | None:intergenic | 25.0% |
| !! | TCCCATTCTATTCTATTTTA+TGG | - | chr2.1:1325435-1325454 | MS.gene85936:intron | 25.0% |
| !! | TTCTTTTTGAATCAGTCTAT+TGG | - | chr2.1:1326631-1326650 | MS.gene85936:CDS | 25.0% |
| !! | TTTTTCCCTATAACTACTTT+TGG | - | chr2.1:1326089-1326108 | MS.gene85936:CDS | 25.0% |
| !!! | TTCTTTCGTATTTTTAATCC+TGG | - | chr2.1:1328271-1328290 | MS.gene85936:intron | 25.0% |
| !!! | TTGTTCTACTTGTTGTAATA+AGG | + | chr2.1:1327554-1327573 | None:intergenic | 25.0% |
| AATTCACCCCTAAAATTGTA+AGG | + | chr2.1:1325619-1325638 | None:intergenic | 30.0% | |
| ACAAAGACATGGTTATAACT+TGG | + | chr2.1:1327735-1327754 | None:intergenic | 30.0% | |
| AGAATTTAACAAAAGGGTTG+GGG | + | chr2.1:1326822-1326841 | None:intergenic | 30.0% | |
| AGCATATGACAATTACAAAG+TGG | + | chr2.1:1328099-1328118 | None:intergenic | 30.0% | |
| ATACCTGAAAATATAAGCAG+GGG | + | chr2.1:1326680-1326699 | None:intergenic | 30.0% | |
| ATGGAAAGAATGATTGCATA+TGG | + | chr2.1:1326374-1326393 | None:intergenic | 30.0% | |
| ATTCACCCCTAAAATTGTAA+GGG | + | chr2.1:1325618-1325637 | None:intergenic | 30.0% | |
| ATTCGATGAACAAGATTCTA+CGG | - | chr2.1:1325346-1325365 | MS.gene85936:intron | 30.0% | |
| CAAATAGGCAAAAGAAAACA+TGG | + | chr2.1:1325569-1325588 | None:intergenic | 30.0% | |
| CACATATAACACATATCCAA+AGG | + | chr2.1:1326764-1326783 | None:intergenic | 30.0% | |
| CACTCATGAAATTTGCAAAT+AGG | + | chr2.1:1325584-1325603 | None:intergenic | 30.0% | |
| CATACACTAAGCGTTTAAAT+AGG | - | chr2.1:1326266-1326285 | MS.gene85936:intron | 30.0% | |
| CATACCTGAAAATATAAGCA+GGG | + | chr2.1:1326681-1326700 | None:intergenic | 30.0% | |
| CTTTAATGTTTATACCAGAC+AGG | + | chr2.1:1327496-1327515 | None:intergenic | 30.0% | |
| CTTTGGATATGTGTTATATG+TGG | - | chr2.1:1326762-1326781 | MS.gene85936:CDS | 30.0% | |
| GATATACTGCAAATGACAAA+TGG | + | chr2.1:1327459-1327478 | None:intergenic | 30.0% | |
| GCTTTCTATACTCATTACAA+TGG | - | chr2.1:1325371-1325390 | MS.gene85936:intron | 30.0% | |
| TAACAAAGAGAAGAAGTTTC+TGG | - | chr2.1:1327657-1327676 | MS.gene85936:intron | 30.0% | |
| TATTGTTAGAATGGAATCCA+TGG | - | chr2.1:1325298-1325317 | MS.gene85936:CDS | 30.0% | |
| TCGTCTTGATTCAGATATAA+AGG | - | chr2.1:1326917-1326936 | MS.gene85936:CDS | 30.0% | |
| TCTGTCATTAGTATTGTTGT+TGG | - | chr2.1:1326180-1326199 | MS.gene85936:intron | 30.0% | |
| TCTTGAAGTAATTGCAAATC+TGG | - | chr2.1:1328132-1328151 | MS.gene85936:intron | 30.0% | |
| TCTTGATTCAGATATAAAGG+AGG | - | chr2.1:1326920-1326939 | MS.gene85936:CDS | 30.0% | |
| TGAAATGCGTATTGTTAGAA+TGG | - | chr2.1:1325289-1325308 | MS.gene85936:CDS | 30.0% | |
| TTATTCAGTCCAAAACTGAT+GGG | - | chr2.1:1327044-1327063 | MS.gene85936:intron | 30.0% | |
| TTGCAATTACTTCAAGACAT+GGG | + | chr2.1:1328129-1328148 | None:intergenic | 30.0% | |
| TTTGAGAACAAATCAAACAG+TGG | + | chr2.1:1328369-1328388 | None:intergenic | 30.0% | |
| TTTGCAATTACTTCAAGACA+TGG | + | chr2.1:1328130-1328149 | None:intergenic | 30.0% | |
| ! | ATTTACCAAACTTGCTCTTA+AGG | - | chr2.1:1326119-1326138 | MS.gene85936:CDS | 30.0% |
| ! | CTGTCATTAGTATTGTTGTT+GGG | - | chr2.1:1326181-1326200 | MS.gene85936:intron | 30.0% |
| ! | TATGATTTGTGTTGCATGTA+TGG | - | chr2.1:1326216-1326235 | MS.gene85936:intron | 30.0% |
| ! | TGTCATTAGTATTGTTGTTG+GGG | - | chr2.1:1326182-1326201 | MS.gene85936:intron | 30.0% |
| ! | TTGAATGTCGTTGACTAATT+CGG | + | chr2.1:1325543-1325562 | None:intergenic | 30.0% |
| ! | TTTAAAGCTGACTACTGATA+GGG | - | chr2.1:1328208-1328227 | MS.gene85936:intron | 30.0% |
| ! | TTTTGGACTGAATAAGTCTA+TGG | + | chr2.1:1327039-1327058 | None:intergenic | 30.0% |
| !! | GTGTTTGATTTGATGCATAT+AGG | - | chr2.1:1325709-1325728 | MS.gene85936:intron | 30.0% |
| !! | TCGTATTTTTAATCCTGGAA+GGG | - | chr2.1:1328276-1328295 | MS.gene85936:intron | 30.0% |
| !! | TGACAATCTTTTGAAAAACG+AGG | - | chr2.1:1327922-1327941 | MS.gene85936:CDS | 30.0% |
| !! | TTACAATTTTAGGGGTGAAT+TGG | - | chr2.1:1325618-1325637 | MS.gene85936:intron | 30.0% |
| !! | TTCGTATTTTTAATCCTGGA+AGG | - | chr2.1:1328275-1328294 | MS.gene85936:intron | 30.0% |
| !! | TTCTGAAGTGAACTATTCAT+TGG | - | chr2.1:1326243-1326262 | MS.gene85936:intron | 30.0% |
| !!! | TACTTTTTTCAGGGAGAAAA+AGG | - | chr2.1:1328184-1328203 | MS.gene85936:intron | 30.0% |
| !!! | TAGAATTTTCAGCTTGTTGT+TGG | + | chr2.1:1326713-1326732 | None:intergenic | 30.0% |
| !!! | TTTTTTTTTTTGGTAGTGGC+CGG | - | chr2.1:1327219-1327238 | MS.gene85936:intron | 30.0% |
| AAGGTAAGCTGTAGTACATA+AGG | + | chr2.1:1325881-1325900 | None:intergenic | 35.0% | |
| AGAACTCCAGATGATACATA+TGG | + | chr2.1:1326895-1326914 | None:intergenic | 35.0% | |
| AGTCCTTACAAGTTAACAGA+TGG | - | chr2.1:1325516-1325535 | MS.gene85936:intron | 35.0% | |
| AGTTACTTGAGATTGAAGAG+AGG | - | chr2.1:1327960-1327979 | MS.gene85936:CDS | 35.0% | |
| ATAAAAATATGCAAGGTCCG+GGG | + | chr2.1:1327253-1327272 | None:intergenic | 35.0% | |
| ATCATCTTCTCATGCATACA+TGG | + | chr2.1:1326463-1326482 | None:intergenic | 35.0% | |
| ATGCATACATGGAAAAACAG+AGG | + | chr2.1:1326452-1326471 | None:intergenic | 35.0% | |
| ATTAAGTATAGCCTCTCTCA+TGG | + | chr2.1:1327131-1327150 | None:intergenic | 35.0% | |
| ATTGCTCCTGTATTTCGAAA+TGG | - | chr2.1:1326392-1326411 | MS.gene85936:intron | 35.0% | |
| ATTTCGAAATACAGGAGCAA+TGG | + | chr2.1:1326393-1326412 | None:intergenic | 35.0% | |
| CAAGTAGAACAAGAAACTGA+AGG | - | chr2.1:1327562-1327581 | MS.gene85936:intron | 35.0% | |
| CATAAAAATATGCAAGGTCC+GGG | + | chr2.1:1327254-1327273 | None:intergenic | 35.0% | |
| CATCTAACGTGAAAACAACA+CGG | + | chr2.1:1325745-1325764 | None:intergenic | 35.0% | |
| CCATCATTTGCATTTGACAA+TGG | + | chr2.1:1328451-1328470 | None:intergenic | 35.0% | |
| CCATTGTCAAATGCAAATGA+TGG | - | chr2.1:1328448-1328467 | MS.gene85936:CDS | 35.0% | |
| CGTTTCTTTCCAGTGTATTA+TGG | + | chr2.1:1326951-1326970 | None:intergenic | 35.0% | |
| CTCTTCAATCTCAAGTAACT+TGG | + | chr2.1:1327960-1327979 | None:intergenic | 35.0% | |
| CTTATTCAGTCCAAAACTGA+TGG | - | chr2.1:1327043-1327062 | MS.gene85936:intron | 35.0% | |
| GAACAAATCAAACAGTGGTT+TGG | + | chr2.1:1328364-1328383 | None:intergenic | 35.0% | |
| GAACACAAAATCCTATGACA+TGG | + | chr2.1:1327779-1327798 | None:intergenic | 35.0% | |
| GAATTTAACAAAAGGGTTGG+GGG | + | chr2.1:1326821-1326840 | None:intergenic | 35.0% | |
| GATTTGATGCATATAGGTTG+AGG | - | chr2.1:1325715-1325734 | MS.gene85936:intron | 35.0% | |
| GCATAAAAATATGCAAGGTC+CGG | + | chr2.1:1327255-1327274 | None:intergenic | 35.0% | |
| GCATACCTGAAAATATAAGC+AGG | + | chr2.1:1326682-1326701 | None:intergenic | 35.0% | |
| GTAAGTTGTAAGTCATGCTT+GGG | - | chr2.1:1327685-1327704 | MS.gene85936:intron | 35.0% | |
| GTTTATACTTACTGTCAGCT+GGG | - | chr2.1:1326580-1326599 | MS.gene85936:CDS | 35.0% | |
| TAAGTTGTAAGTCATGCTTG+GGG | - | chr2.1:1327686-1327705 | MS.gene85936:intron | 35.0% | |
| TAATGTTTATACCAGACAGG+AGG | + | chr2.1:1327493-1327512 | None:intergenic | 35.0% | |
| TACTACCTTAAGAGCAAGTT+TGG | + | chr2.1:1326127-1326146 | None:intergenic | 35.0% | |
| TATAGATGCAAGCTGAGAAA+GGG | - | chr2.1:1325917-1325936 | MS.gene85936:intron | 35.0% | |
| TCATTTGCATTTGACAATGG+CGG | + | chr2.1:1328448-1328467 | None:intergenic | 35.0% | |
| TCTCAAACAGCATAAGATTC+AGG | - | chr2.1:1327618-1327637 | MS.gene85936:intron | 35.0% | |
| TGACAAGACAATGAGTTCTT+TGG | + | chr2.1:1326060-1326079 | None:intergenic | 35.0% | |
| TGTGTTATATGTGGGTTTGT+TGG | - | chr2.1:1326771-1326790 | MS.gene85936:intron | 35.0% | |
| TGTTTATACTTACTGTCAGC+TGG | - | chr2.1:1326579-1326598 | MS.gene85936:CDS | 35.0% | |
| TTATAGATGCAAGCTGAGAA+AGG | - | chr2.1:1325916-1325935 | MS.gene85936:intron | 35.0% | |
| TTGCAACCATATGTATCATC+TGG | - | chr2.1:1326886-1326905 | MS.gene85936:intron | 35.0% | |
| TTGCTCCTGTATTTCGAAAT+GGG | - | chr2.1:1326393-1326412 | MS.gene85936:intron | 35.0% | |
| ! | AACTAACTTCCCATCAGTTT+TGG | + | chr2.1:1327056-1327075 | None:intergenic | 35.0% |
| ! | ACATTTAGTTTCATGGGACA+AGG | + | chr2.1:1328029-1328048 | None:intergenic | 35.0% |
| ! | GGAATACACTCACCAATTTT+TGG | + | chr2.1:1327438-1327457 | None:intergenic | 35.0% |
| !! | CGTATTTTTAATCCTGGAAG+GGG | - | chr2.1:1328277-1328296 | MS.gene85936:intron | 35.0% |
| !! | CTTTAAAGCTGACTACTGAT+AGG | - | chr2.1:1328207-1328226 | MS.gene85936:intron | 35.0% |
| !! | TTTTGAAAAACGAGGAGATC+TGG | - | chr2.1:1327930-1327949 | MS.gene85936:CDS | 35.0% |
| !!! | ATGGGTGATGTACTTTTTTC+AGG | - | chr2.1:1328174-1328193 | MS.gene85936:intron | 35.0% |
| !!! | TGGGTGATGTACTTTTTTCA+GGG | - | chr2.1:1328175-1328194 | MS.gene85936:intron | 35.0% |
| !!! | TTTTTTTTTTGGTAGTGGCC+GGG | - | chr2.1:1327220-1327239 | MS.gene85936:intron | 35.0% |
| AACACTGTAACGATCTTCCA+TGG | + | chr2.1:1325318-1325337 | None:intergenic | 40.0% | |
| AATTTCCGTAGCAGTTCAGA+AGG | - | chr2.1:1327588-1327607 | MS.gene85936:intron | 40.0% | |
| ACATATCCAAAGGTTCTCAG+TGG | + | chr2.1:1326754-1326773 | None:intergenic | 40.0% | |
| ACCCCTAAAATTGTAAGGGT+CGG | + | chr2.1:1325614-1325633 | None:intergenic | 40.0% | |
| ACGCTTAGTTTCCACTTCTA+AGG | + | chr2.1:1326987-1327006 | None:intergenic | 40.0% | |
| ACGTTAGATGTGCAGTATAC+TGG | - | chr2.1:1325755-1325774 | MS.gene85936:CDS | 40.0% | |
| ATCTGCCCATTTCGAAATAC+AGG | + | chr2.1:1326401-1326420 | None:intergenic | 40.0% | |
| CATTTGCATTTGACAATGGC+GGG | + | chr2.1:1328447-1328466 | None:intergenic | 40.0% | |
| CCAGATGTTTGCAAACTGAT+GGG | - | chr2.1:1328156-1328175 | MS.gene85936:intron | 40.0% | |
| CGTTAGATGTGCAGTATACT+GGG | - | chr2.1:1325756-1325775 | MS.gene85936:CDS | 40.0% | |
| CTGTTCAGTTGAAGTAGCAT+TGG | + | chr2.1:1325804-1325823 | None:intergenic | 40.0% | |
| GATTCTTCTTGTCCTGTAAG+TGG | - | chr2.1:1326418-1326437 | MS.gene85936:intron | 40.0% | |
| GGTAAGTTGTAAGTCATGCT+TGG | - | chr2.1:1327684-1327703 | MS.gene85936:intron | 40.0% | |
| TCCAGATGTTTGCAAACTGA+TGG | - | chr2.1:1328155-1328174 | MS.gene85936:intron | 40.0% | |
| TGTACAGCTTAGTAACCTCA+TGG | - | chr2.1:1328390-1328409 | MS.gene85936:CDS | 40.0% | |
| TGTACTGTGTGAGCTACTAT+GGG | - | chr2.1:1326523-1326542 | MS.gene85936:intron | 40.0% | |
| TTACAGTCAGCTATTGCTCT+CGG | + | chr2.1:1326502-1326521 | None:intergenic | 40.0% | |
| TTCCAAAATTTCCTCCTGTC+TGG | - | chr2.1:1327479-1327498 | MS.gene85936:intron | 40.0% | |
| ! | AACCTCATGGTTTGTCTTGA+GGG | - | chr2.1:1328403-1328422 | MS.gene85936:CDS | 40.0% |
| ! | AGAGAAGAAGTTTCTGGATG+AGG | - | chr2.1:1327663-1327682 | MS.gene85936:intron | 40.0% |
| ! | AGTCCCCTGCTTATATTTTC+AGG | - | chr2.1:1326674-1326693 | MS.gene85936:CDS | 40.0% |
| ! | CATTAGTATTGTTGTTGGGG+TGG | - | chr2.1:1326185-1326204 | MS.gene85936:intron | 40.0% |
| ! | GCATTGCTATTCCTTAGAAG+TGG | - | chr2.1:1326973-1326992 | MS.gene85936:CDS | 40.0% |
| ! | GCGGATTTTTGTCAGTTTTG+TGG | - | chr2.1:1325245-1325264 | MS.gene85936:CDS | 40.0% |
| ! | GTCCGACCCTTACAATTTTA+GGG | - | chr2.1:1325609-1325628 | MS.gene85936:intron | 40.0% |
| ! | TAACCTCATGGTTTGTCTTG+AGG | - | chr2.1:1328402-1328421 | MS.gene85936:CDS | 40.0% |
| ! | TACCAGACAGGAGGAAATTT+TGG | + | chr2.1:1327484-1327503 | None:intergenic | 40.0% |
| ! | TCAGTTGAAGTAGCATTGGA+TGG | + | chr2.1:1325800-1325819 | None:intergenic | 40.0% |
| ! | TCCGACCCTTACAATTTTAG+GGG | - | chr2.1:1325610-1325629 | MS.gene85936:intron | 40.0% |
| ! | TGTCCGACCCTTACAATTTT+AGG | - | chr2.1:1325608-1325627 | MS.gene85936:intron | 40.0% |
| !! | CAGTATTCACCTGCTTTTCT+AGG | + | chr2.1:1328241-1328260 | None:intergenic | 40.0% |
| !! | GGTCCATCTGTTAACTTGTA+AGG | + | chr2.1:1325522-1325541 | None:intergenic | 40.0% |
| !!! | TTTTTTTTTGGTAGTGGCCG+GGG | - | chr2.1:1327221-1327240 | MS.gene85936:intron | 40.0% |
| AAGGCCTAAGGCGGAAAAAA+GGG | + | chr2.1:1325862-1325881 | None:intergenic | 45.0% | |
| AAGGGACATGCAATGTACCA+AGG | + | chr2.1:1325844-1325863 | None:intergenic | 45.0% | |
| AAGTGGAAACTAAGCGTGTC+TGG | - | chr2.1:1326990-1327009 | MS.gene85936:CDS | 45.0% | |
| AGTGGAAACTAAGCGTGTCT+GGG | - | chr2.1:1326991-1327010 | MS.gene85936:CDS | 45.0% | |
| CCCATCAGTTTGCAAACATC+TGG | + | chr2.1:1328159-1328178 | None:intergenic | 45.0% | |
| CGATTAGATCAAGACACGAG+TGG | - | chr2.1:1326337-1326356 | MS.gene85936:intron | 45.0% | |
| CTGTACTGTGTGAGCTACTA+TGG | - | chr2.1:1326522-1326541 | MS.gene85936:intron | 45.0% | |
| GAGGACATGCCATAATACAC+TGG | - | chr2.1:1326939-1326958 | MS.gene85936:CDS | 45.0% | |
| GCTGACTACTGATAGGGTAA+CGG | - | chr2.1:1328214-1328233 | MS.gene85936:intron | 45.0% | |
| GCTGTAGTACATAAGGCCTA+AGG | + | chr2.1:1325874-1325893 | None:intergenic | 45.0% | |
| GTACTGTGTGAGCTACTATG+GGG | - | chr2.1:1326524-1326543 | MS.gene85936:intron | 45.0% | |
| GTAGTACATAAGGCCTAAGG+CGG | + | chr2.1:1325871-1325890 | None:intergenic | 45.0% | |
| GTCAAACCACTGAGAACCTT+TGG | - | chr2.1:1326745-1326764 | MS.gene85936:CDS | 45.0% | |
| TAAGGCCTAAGGCGGAAAAA+AGG | + | chr2.1:1325863-1325882 | None:intergenic | 45.0% | |
| TACAGTCAGCTATTGCTCTC+GGG | + | chr2.1:1326501-1326520 | None:intergenic | 45.0% | |
| TACTGTCAGCTGGGATTTCT+TGG | - | chr2.1:1326589-1326608 | MS.gene85936:CDS | 45.0% | |
| TGCAATGTACCAAGGCAAAC+TGG | + | chr2.1:1325836-1325855 | None:intergenic | 45.0% | |
| TGGAGATAATGCCATGAGAG+AGG | - | chr2.1:1327117-1327136 | MS.gene85936:intron | 45.0% | |
| TGTGAGCTACTATGGGGATT+GGG | - | chr2.1:1326530-1326549 | MS.gene85936:intron | 45.0% | |
| ! | AAGCGTGTCTGGGATTATGT+CGG | - | chr2.1:1327001-1327020 | MS.gene85936:CDS | 45.0% |
| ! | TCATGGTTTGTCTTGAGGGT+GGG | - | chr2.1:1328407-1328426 | MS.gene85936:CDS | 45.0% |
| !! | ATATGTGGGTTTGTTGGCTG+TGG | - | chr2.1:1326777-1326796 | MS.gene85936:intron | 45.0% |
| !! | CAGCTTGTTGTTGGCAATAG+CGG | + | chr2.1:1326704-1326723 | None:intergenic | 45.0% |
| !!! | ATGTCCCTTTTTTCCGCCTT+AGG | - | chr2.1:1325855-1325874 | MS.gene85936:intron | 45.0% |
| !!! | TCGTCGTTTTTCGTCTCTAG+AGG | - | chr2.1:1325394-1325413 | MS.gene85936:intron | 45.0% |
| CACCCTCAAGACAAACCATG+AGG | + | chr2.1:1328408-1328427 | None:intergenic | 50.0% | |
| CCAAGGCAAACTGGACATGT+AGG | + | chr2.1:1325827-1325846 | None:intergenic | 50.0% | |
| CCTACATGTCCAGTTTGCCT+TGG | - | chr2.1:1325824-1325843 | MS.gene85936:intron | 50.0% | |
| GACAGCCTTCTGAACTGCTA+CGG | + | chr2.1:1327596-1327615 | None:intergenic | 50.0% | |
| GTGAGCTACTATGGGGATTG+GGG | - | chr2.1:1326531-1326550 | MS.gene85936:intron | 50.0% | |
| GTGAGCTTAGCTCAGTTGGT+TGG | + | chr2.1:1327283-1327302 | None:intergenic | 50.0% | |
| GTGTGAGCTACTATGGGGAT+TGG | - | chr2.1:1326529-1326548 | MS.gene85936:intron | 50.0% | |
| TACTATGGGGATTGGGGTGT+CGG | - | chr2.1:1326537-1326556 | MS.gene85936:intron | 50.0% | |
| TTGTCTTGAGGGTGGGAAGA+CGG | - | chr2.1:1328414-1328433 | MS.gene85936:CDS | 50.0% | |
| ! | CTCATGGTTTGTCTTGAGGG+TGG | - | chr2.1:1328406-1328425 | MS.gene85936:CDS | 50.0% |
| !! | GGTAACGGACCTAGAAAAGC+AGG | - | chr2.1:1328229-1328248 | MS.gene85936:intron | 50.0% |
| !!! | TCCTGGAAGGGGTTTTGTTG+CGG | - | chr2.1:1328288-1328307 | MS.gene85936:intron | 50.0% |
| CACTGTGTGCATGCAGACAG+TGG | - | chr2.1:1327088-1327107 | MS.gene85936:intron | 55.0% | |
| CCAACTGAGCTAAGCTCACG+AGG | - | chr2.1:1327284-1327303 | MS.gene85936:intron | 55.0% | |
| CCTCGTGAGCTTAGCTCAGT+TGG | + | chr2.1:1327287-1327306 | None:intergenic | 55.0% | |
| GAGGCAGCAGAACCACTTAC+AGG | + | chr2.1:1326433-1326452 | None:intergenic | 55.0% | |
| !! | GTGGGTTTGTTGGCTGTGGA+AGG | - | chr2.1:1326781-1326800 | MS.gene85936:intron | 55.0% |
| !!! | CCTGGAAGGGGTTTTGTTGC+GGG | - | chr2.1:1328289-1328308 | MS.gene85936:intron | 55.0% |
| !!! | CTGGAAGGGGTTTTGTTGCG+GGG | - | chr2.1:1328290-1328309 | MS.gene85936:intron | 55.0% |
| AAGGTCCGGGGTTCAAACCC+CGG | + | chr2.1:1327241-1327260 | None:intergenic | 60.0% | |
| CATGCAGACAGTGGCAGCTG+TGG | - | chr2.1:1327097-1327116 | MS.gene85936:intron | 60.0% | |
| CCCGCAACAAAACCCCTTCC+AGG | + | chr2.1:1328292-1328311 | None:intergenic | 60.0% | |
| !!! | GGGTTTTGTTGCGGGGTGCA+GGG | - | chr2.1:1328297-1328316 | MS.gene85936:intron | 60.0% |
| !!! | GGTTTTGTTGCGGGGTGCAG+GGG | - | chr2.1:1328298-1328317 | MS.gene85936:intron | 60.0% |
| AGTGGCCGGGGTTTGAACCC+CGG | - | chr2.1:1327233-1327252 | MS.gene85936:intron | 65.0% | |
| !!! | GGGGTTTTGTTGCGGGGTGC+AGG | - | chr2.1:1328296-1328315 | MS.gene85936:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 1325236 | 1328483 | 1325236 | ID=MS.gene85936 |
| chr2.1 | mRNA | 1325236 | 1328483 | 1325236 | ID=MS.gene85936.t1;Parent=MS.gene85936 |
| chr2.1 | exon | 1328385 | 1328483 | 1328385 | ID=MS.gene85936.t1.exon1;Parent=MS.gene85936.t1 |
| chr2.1 | CDS | 1328385 | 1328483 | 1328385 | ID=cds.MS.gene85936.t1;Parent=MS.gene85936.t1 |
| chr2.1 | exon | 1327874 | 1327988 | 1327874 | ID=MS.gene85936.t1.exon2;Parent=MS.gene85936.t1 |
| chr2.1 | CDS | 1327874 | 1327988 | 1327874 | ID=cds.MS.gene85936.t1;Parent=MS.gene85936.t1 |
| chr2.1 | exon | 1327287 | 1327384 | 1327287 | ID=MS.gene85936.t1.exon3;Parent=MS.gene85936.t1 |
| chr2.1 | CDS | 1327287 | 1327384 | 1327287 | ID=cds.MS.gene85936.t1;Parent=MS.gene85936.t1 |
| chr2.1 | exon | 1326917 | 1327023 | 1326917 | ID=MS.gene85936.t1.exon4;Parent=MS.gene85936.t1 |
| chr2.1 | CDS | 1326917 | 1327023 | 1326917 | ID=cds.MS.gene85936.t1;Parent=MS.gene85936.t1 |
| chr2.1 | exon | 1326554 | 1326788 | 1326554 | ID=MS.gene85936.t1.exon5;Parent=MS.gene85936.t1 |
| chr2.1 | CDS | 1326554 | 1326788 | 1326554 | ID=cds.MS.gene85936.t1;Parent=MS.gene85936.t1 |
| chr2.1 | exon | 1326275 | 1326328 | 1326275 | ID=MS.gene85936.t1.exon6;Parent=MS.gene85936.t1 |
| chr2.1 | CDS | 1326275 | 1326328 | 1326275 | ID=cds.MS.gene85936.t1;Parent=MS.gene85936.t1 |
| chr2.1 | exon | 1326035 | 1326178 | 1326035 | ID=MS.gene85936.t1.exon7;Parent=MS.gene85936.t1 |
| chr2.1 | CDS | 1326035 | 1326178 | 1326035 | ID=cds.MS.gene85936.t1;Parent=MS.gene85936.t1 |
| chr2.1 | exon | 1325738 | 1325802 | 1325738 | ID=MS.gene85936.t1.exon8;Parent=MS.gene85936.t1 |
| chr2.1 | CDS | 1325738 | 1325802 | 1325738 | ID=cds.MS.gene85936.t1;Parent=MS.gene85936.t1 |
| chr2.1 | exon | 1325469 | 1325523 | 1325469 | ID=MS.gene85936.t1.exon9;Parent=MS.gene85936.t1 |
| chr2.1 | CDS | 1325469 | 1325523 | 1325469 | ID=cds.MS.gene85936.t1;Parent=MS.gene85936.t1 |
| chr2.1 | exon | 1325236 | 1325322 | 1325236 | ID=MS.gene85936.t1.exon10;Parent=MS.gene85936.t1 |
| chr2.1 | CDS | 1325236 | 1325322 | 1325236 | ID=cds.MS.gene85936.t1;Parent=MS.gene85936.t1 |
| Gene Sequence |
| Protein sequence |
