Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038701.t1 | AFK45112.1 | 96 | 346 | 13 | 1 | 1 | 346 | 1 | 345 | 1.10E-175 | 625.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038701.t1 | Q84L08 | 78.0 | 304 | 67 | 0 | 2 | 305 | 3 | 306 | 2.0e-125 | 450.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038701.t1 | G7JU76 | 96.0 | 346 | 13 | 1 | 1 | 346 | 1 | 345 | 7.8e-176 | 625.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene038701 | MS.gene039961 | PPI |
| MS.gene038701 | MS.gene007969 | PPI |
| MS.gene99882 | MS.gene038701 | PPI |
| MS.gene031892 | MS.gene038701 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038701.t1 | MTR_4g113270 | 98.266 | 346 | 5 | 1 | 1 | 346 | 1 | 345 | 0.0 | 676 |
| MS.gene038701.t1 | MTR_4g113270 | 98.235 | 340 | 5 | 1 | 1 | 340 | 1 | 339 | 0.0 | 665 |
| MS.gene038701.t1 | MTR_1g100860 | 47.788 | 339 | 158 | 4 | 15 | 340 | 41 | 373 | 5.73e-98 | 295 |
| MS.gene038701.t1 | MTR_4g018770 | 47.198 | 339 | 160 | 4 | 15 | 340 | 35 | 367 | 8.72e-98 | 294 |
| MS.gene038701.t1 | MTR_1g100860 | 46.739 | 276 | 130 | 4 | 77 | 340 | 5 | 275 | 4.57e-76 | 235 |
| MS.gene038701.t1 | MTR_4g018770 | 46.570 | 277 | 129 | 4 | 77 | 340 | 5 | 275 | 6.75e-76 | 235 |
| MS.gene038701.t1 | MTR_3g463360 | 24.242 | 297 | 206 | 6 | 19 | 304 | 108 | 396 | 9.01e-13 | 69.3 |
| MS.gene038701.t1 | MTR_3g109070 | 27.692 | 260 | 164 | 7 | 18 | 267 | 20 | 265 | 2.14e-12 | 67.4 |
| MS.gene038701.t1 | MTR_3g109070 | 27.692 | 260 | 164 | 7 | 18 | 267 | 20 | 265 | 3.48e-12 | 66.2 |
| MS.gene038701.t1 | MTR_3g096310 | 23.102 | 303 | 218 | 5 | 18 | 311 | 45 | 341 | 6.48e-12 | 66.2 |
| MS.gene038701.t1 | MTR_3g109070 | 28.218 | 202 | 126 | 5 | 18 | 210 | 20 | 211 | 2.80e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene038701.t1 | AT5G19980 | 71.304 | 345 | 92 | 2 | 2 | 346 | 3 | 340 | 6.17e-169 | 474 |
| MS.gene038701.t1 | AT1G76340 | 48.615 | 325 | 161 | 3 | 15 | 337 | 37 | 357 | 9.10e-101 | 302 |
| MS.gene038701.t1 | AT4G31600 | 26.848 | 257 | 170 | 5 | 18 | 267 | 19 | 264 | 3.66e-13 | 69.7 |
| MS.gene038701.t1 | AT2G13650 | 22.896 | 297 | 212 | 5 | 18 | 304 | 38 | 327 | 8.51e-12 | 65.9 |
| MS.gene038701.t1 | AT2G13650 | 22.896 | 297 | 212 | 5 | 18 | 304 | 38 | 327 | 8.51e-12 | 65.9 |
| MS.gene038701.t1 | AT4G31600 | 27.136 | 199 | 132 | 3 | 18 | 210 | 19 | 210 | 1.26e-11 | 65.1 |
Find 65 sgRNAs with CRISPR-Local
Find 82 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCCTTGGTTGTTATTCTTGC+TGG | 0.233454 | 8.4:+15270974 | MS.gene038701:CDS |
| GCTACCGCGTTTACCGTTAC+TGG | 0.269983 | 8.4:+15271340 | MS.gene038701:CDS |
| GGTTTGTTGATTAGTTTCTT+TGG | 0.270396 | 8.4:+15271292 | MS.gene038701:CDS |
| GAAACCCTAATTTACCTAAA+AGG | 0.287655 | 8.4:-15270742 | None:intergenic |
| TTACACTCACGGCTTATTCT+TGG | 0.301434 | 8.4:+15271029 | MS.gene038701:CDS |
| TGAGTCTTGGGTTGAATACT+TGG | 0.340183 | 8.4:+15271110 | MS.gene038701:CDS |
| AATAACAACCAAGGACAAAA+AGG | 0.342091 | 8.4:-15270966 | None:intergenic |
| TACACTCACGGCTTATTCTT+GGG | 0.343245 | 8.4:+15271030 | MS.gene038701:CDS |
| GGTTATGTTGCTACTGATTC+CGG | 0.348332 | 8.4:+15271004 | MS.gene038701:CDS |
| CTACCGCGTTTACCGTTACT+GGG | 0.359242 | 8.4:+15271341 | MS.gene038701:CDS |
| TGGCAATTAATGTGACGATT+TGG | 0.360897 | 8.4:+15271386 | MS.gene038701:CDS |
| GTTTCGTTGTCTTGTGTGTT+TGG | 0.368137 | 8.4:+15271271 | MS.gene038701:CDS |
| GATGGTTTATATTAAGCATA+TGG | 0.374607 | 8.4:+15271084 | MS.gene038701:CDS |
| GCATGCTAGTCCAGCTGGTT+TGG | 0.378044 | 8.4:+15271414 | MS.gene038701:CDS |
| CAGCAATCGGTGACTGGAAA+TGG | 0.381275 | 8.4:+15271475 | MS.gene038701:CDS |
| AAGCATATGGTTATGAGTCT+TGG | 0.383947 | 8.4:+15271097 | MS.gene038701:CDS |
| AGCATATGGTTATGAGTCTT+GGG | 0.397212 | 8.4:+15271098 | MS.gene038701:CDS |
| GGCAATTAATGTGACGATTT+GGG | 0.402674 | 8.4:+15271387 | MS.gene038701:CDS |
| GTTATTCTTGCTGGTGCTGT+TGG | 0.419854 | 8.4:+15270983 | MS.gene038701:CDS |
| GACTGGAAATGGTTCGCAAC+AGG | 0.428349 | 8.4:+15271486 | MS.gene038701:CDS |
| GATGTTGAAAGTAGTCTTGT+TGG | 0.433983 | 8.4:+15271535 | MS.gene038701:CDS |
| GCCACAAGTGGCTTAGTAAT+CGG | 0.437849 | 8.4:+15270605 | MS.gene038701:CDS |
| GGGAAGAATTTCTTAGCGAT+TGG | 0.443284 | 8.4:-15270788 | None:intergenic |
| AAGAAGAAAACGAGTGCTGC+AGG | 0.450306 | 8.4:-15270809 | None:intergenic |
| GAGTCTTGGGTTGAATACTT+GGG | 0.451840 | 8.4:+15271111 | MS.gene038701:CDS |
| CTTTATCAGCAATCGGTGAC+TGG | 0.470901 | 8.4:+15271469 | MS.gene038701:CDS |
| GGGTGTTCTTTATCAGCAAT+CGG | 0.471127 | 8.4:+15271462 | MS.gene038701:CDS |
| TGGTTCGCAACAGGCGGTTG+TGG | 0.475038 | 8.4:+15271495 | MS.gene038701:CDS |
| GTTAGCGTGACGAAGGAGAT+TGG | 0.477146 | 8.4:-15270849 | None:intergenic |
| TGAAGAAGTGAGATATTGTA+AGG | 0.495489 | 8.4:-15270708 | None:intergenic |
| ATAAGCCGTGAGTGTAAAAC+CGG | 0.495535 | 8.4:-15271023 | None:intergenic |
| ACTGCCTTGAGATCGAGTAC+TGG | 0.496102 | 8.4:+15271217 | MS.gene038701:CDS |
| TGTAAGGCTGTTAAAAGACC+TGG | 0.499578 | 8.4:-15270692 | None:intergenic |
| CAATATCTCACTTCTTCACT+CGG | 0.505402 | 8.4:+15270713 | MS.gene038701:CDS |
| CTGCCTTGAGATCGAGTACT+GGG | 0.507997 | 8.4:+15271218 | MS.gene038701:CDS |
| AGTCTTGGGTTGAATACTTG+GGG | 0.509311 | 8.4:+15271112 | MS.gene038701:CDS |
| GATAAGCATGCTAGTCCAGC+TGG | 0.512847 | 8.4:+15271409 | MS.gene038701:CDS |
| TGAAGATGAGAGTGAAGGAA+AGG | 0.515215 | 8.4:+15271570 | MS.gene038701:CDS |
| CTCGCTGATACTGCGTTTCG+CGG | 0.516331 | 8.4:+15270920 | MS.gene038701:CDS |
| ATAAACCATCTCAGTAGTAA+TGG | 0.529935 | 8.4:-15271071 | None:intergenic |
| GAAGATGAGAGTGAAGGAAA+GGG | 0.531374 | 8.4:+15271571 | MS.gene038701:CDS |
| AGCAAACAAACCAAACCAGC+TGG | 0.537823 | 8.4:-15271424 | None:intergenic |
| TTAGCGATTGGAATAGTGAA+AGG | 0.542673 | 8.4:-15270776 | None:intergenic |
| GGTTACCATTACTACTGAGA+TGG | 0.551400 | 8.4:+15271066 | MS.gene038701:CDS |
| CAGCGAGAGCAACAAGAAGA+GGG | 0.556974 | 8.4:-15270904 | None:intergenic |
| TCAGCGAGAGCAACAAGAAG+AGG | 0.569697 | 8.4:-15270905 | None:intergenic |
| CAACAACACTACGCCACAAG+TGG | 0.587960 | 8.4:+15270593 | MS.gene038701:CDS |
| GAAAGTAGTCTTGTTGGTGA+TGG | 0.589182 | 8.4:+15271541 | MS.gene038701:CDS |
| ACCAGCAAGAATAACAACCA+AGG | 0.595444 | 8.4:-15270975 | None:intergenic |
| AAGGTAAAATTAGACGGAGA+GGG | 0.604146 | 8.4:-15270947 | None:intergenic |
| CTTATTCACAACCCCAGTAA+CGG | 0.607538 | 8.4:-15271353 | None:intergenic |
| GTAAGGCTGTTAAAAGACCT+GGG | 0.614797 | 8.4:-15270691 | None:intergenic |
| AAAGGTAAAATTAGACGGAG+AGG | 0.624222 | 8.4:-15270948 | None:intergenic |
| GTGACGAAGGAGATTGGTGT+TGG | 0.632002 | 8.4:-15270843 | None:intergenic |
| ACTCCCAGTACTCGATCTCA+AGG | 0.635928 | 8.4:-15271221 | None:intergenic |
| ACCGATTACTAAGCCACTTG+TGG | 0.637733 | 8.4:-15270606 | None:intergenic |
| TATCAACGTTAGCGTGACGA+AGG | 0.639770 | 8.4:-15270856 | None:intergenic |
| TGGAAATGGTTCGCAACAGG+CGG | 0.646327 | 8.4:+15271489 | MS.gene038701:CDS |
| ATTACTCAATTCAACTACCC+AGG | 0.649152 | 8.4:+15270674 | MS.gene038701:CDS |
| AGAAGAAAACGAGTGCTGCA+GGG | 0.656660 | 8.4:-15270808 | None:intergenic |
| AGCGAGAGCAACAAGAAGAG+GGG | 0.662395 | 8.4:-15270903 | None:intergenic |
| TGTGAATAAGTTTCTGACTG+TGG | 0.688581 | 8.4:+15271366 | MS.gene038701:CDS |
| GAATCTGAAGATGAGAGTGA+AGG | 0.699145 | 8.4:+15271565 | MS.gene038701:CDS |
| TACCGCGTTTACCGTTACTG+GGG | 0.705827 | 8.4:+15271342 | MS.gene038701:CDS |
| AACCCCAGTAACGGTAAACG+CGG | 0.739549 | 8.4:-15271344 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTACCTTTTAGGTAAATTA+GGG | + | chr8.4:15270738-15270757 | MS.gene038701:CDS | 20.0% |
| ! | GACAAAAAGGTAAAATTAGA+CGG | - | chr8.4:15270956-15270975 | None:intergenic | 25.0% |
| ! | GATGGTTTATATTAAGCATA+TGG | + | chr8.4:15271084-15271103 | MS.gene038701:CDS | 25.0% |
| !! | TAATTTTACCTTTTTGTCCT+TGG | + | chr8.4:15270958-15270977 | MS.gene038701:CDS | 25.0% |
| !!! | GTTTACCTTTTAGGTAAATT+AGG | + | chr8.4:15270737-15270756 | MS.gene038701:CDS | 25.0% |
| !!! | GTTTGCTTTTTACGATTATT+GGG | + | chr8.4:15271440-15271459 | MS.gene038701:CDS | 25.0% |
| !!! | TGTTTGCTTTTTACGATTAT+TGG | + | chr8.4:15271439-15271458 | MS.gene038701:CDS | 25.0% |
| !!! | TTTGCTTTTTACGATTATTG+GGG | + | chr8.4:15271441-15271460 | MS.gene038701:CDS | 25.0% |
| AATAACAACCAAGGACAAAA+AGG | - | chr8.4:15270969-15270988 | None:intergenic | 30.0% | |
| ATAAACCATCTCAGTAGTAA+TGG | - | chr8.4:15271074-15271093 | None:intergenic | 30.0% | |
| GAAACCCTAATTTACCTAAA+AGG | - | chr8.4:15270745-15270764 | None:intergenic | 30.0% | |
| TGAAGAAGTGAGATATTGTA+AGG | - | chr8.4:15270711-15270730 | None:intergenic | 30.0% | |
| !! | GGTTTGTTGATTAGTTTCTT+TGG | + | chr8.4:15271292-15271311 | MS.gene038701:CDS | 30.0% |
| !!! | TTGCTTTTTACGATTATTGG+GGG | + | chr8.4:15271442-15271461 | MS.gene038701:CDS | 30.0% |
| AAAGGTAAAATTAGACGGAG+AGG | - | chr8.4:15270951-15270970 | None:intergenic | 35.0% | |
| AAGCATATGGTTATGAGTCT+TGG | + | chr8.4:15271097-15271116 | MS.gene038701:CDS | 35.0% | |
| AAGGTAAAATTAGACGGAGA+GGG | - | chr8.4:15270950-15270969 | None:intergenic | 35.0% | |
| AGCATATGGTTATGAGTCTT+GGG | + | chr8.4:15271098-15271117 | MS.gene038701:CDS | 35.0% | |
| ATTACTCAATTCAACTACCC+AGG | + | chr8.4:15270674-15270693 | MS.gene038701:CDS | 35.0% | |
| CAATATCTCACTTCTTCACT+CGG | + | chr8.4:15270713-15270732 | MS.gene038701:CDS | 35.0% | |
| CCAGTCAAAAACCAAAAAAC+AGG | - | chr8.4:15271178-15271197 | None:intergenic | 35.0% | |
| GGCAATTAATGTGACGATTT+GGG | + | chr8.4:15271387-15271406 | MS.gene038701:CDS | 35.0% | |
| TGGCAATTAATGTGACGATT+TGG | + | chr8.4:15271386-15271405 | MS.gene038701:CDS | 35.0% | |
| TGTGAATAAGTTTCTGACTG+TGG | + | chr8.4:15271366-15271385 | MS.gene038701:CDS | 35.0% | |
| TTAGCGATTGGAATAGTGAA+AGG | - | chr8.4:15270779-15270798 | None:intergenic | 35.0% | |
| ! | TTCTTGGGCTTTTGCTTATT+TGG | + | chr8.4:15271045-15271064 | MS.gene038701:CDS | 35.0% |
| ! | TTTGACTGGTGAGAATTTTG+AGG | + | chr8.4:15271189-15271208 | MS.gene038701:CDS | 35.0% |
| !! | GATGTTGAAAGTAGTCTTGT+TGG | + | chr8.4:15271535-15271554 | MS.gene038701:CDS | 35.0% |
| !!! | CCTGTTTTTTGGTTTTTGAC+TGG | + | chr8.4:15271175-15271194 | MS.gene038701:CDS | 35.0% |
| !!! | TGATGATTGCTCCTGTTTTT+TGG | + | chr8.4:15271164-15271183 | MS.gene038701:CDS | 35.0% |
| ACCAGCAAGAATAACAACCA+AGG | - | chr8.4:15270978-15270997 | None:intergenic | 40.0% | |
| ATAAGCCGTGAGTGTAAAAC+CGG | - | chr8.4:15271026-15271045 | None:intergenic | 40.0% | |
| CTTATTCACAACCCCAGTAA+CGG | - | chr8.4:15271356-15271375 | None:intergenic | 40.0% | |
| GAAGATGAGAGTGAAGGAAA+GGG | + | chr8.4:15271571-15271590 | MS.gene038701:CDS | 40.0% | |
| GAATCTGAAGATGAGAGTGA+AGG | + | chr8.4:15271565-15271584 | MS.gene038701:CDS | 40.0% | |
| GGGAAGAATTTCTTAGCGAT+TGG | - | chr8.4:15270791-15270810 | None:intergenic | 40.0% | |
| GGGTGTTCTTTATCAGCAAT+CGG | + | chr8.4:15271462-15271481 | MS.gene038701:CDS | 40.0% | |
| GGTTACCATTACTACTGAGA+TGG | + | chr8.4:15271066-15271085 | MS.gene038701:CDS | 40.0% | |
| GTAAGGCTGTTAAAAGACCT+GGG | - | chr8.4:15270694-15270713 | None:intergenic | 40.0% | |
| GTTTCGTTGTCTTGTGTGTT+TGG | + | chr8.4:15271271-15271290 | MS.gene038701:CDS | 40.0% | |
| TACACTCACGGCTTATTCTT+GGG | + | chr8.4:15271030-15271049 | MS.gene038701:CDS | 40.0% | |
| TGAAGATGAGAGTGAAGGAA+AGG | + | chr8.4:15271570-15271589 | MS.gene038701:CDS | 40.0% | |
| TGTAAGGCTGTTAAAAGACC+TGG | - | chr8.4:15270695-15270714 | None:intergenic | 40.0% | |
| TTACACTCACGGCTTATTCT+TGG | + | chr8.4:15271029-15271048 | MS.gene038701:CDS | 40.0% | |
| ! | GTTCGATGTGAATGCGTTTT+TGG | + | chr8.4:15271246-15271265 | MS.gene038701:CDS | 40.0% |
| ! | TCCTTGGTTGTTATTCTTGC+TGG | + | chr8.4:15270974-15270993 | MS.gene038701:CDS | 40.0% |
| ! | TGATTCCGGTTTTACACTCA+CGG | + | chr8.4:15271018-15271037 | MS.gene038701:CDS | 40.0% |
| !! | AGTCTTGGGTTGAATACTTG+GGG | + | chr8.4:15271112-15271131 | MS.gene038701:CDS | 40.0% |
| !! | GAAAGTAGTCTTGTTGGTGA+TGG | + | chr8.4:15271541-15271560 | MS.gene038701:CDS | 40.0% |
| !! | GAGTCTTGGGTTGAATACTT+GGG | + | chr8.4:15271111-15271130 | MS.gene038701:CDS | 40.0% |
| !! | GGTTATGTTGCTACTGATTC+CGG | + | chr8.4:15271004-15271023 | MS.gene038701:CDS | 40.0% |
| !! | TGAGTCTTGGGTTGAATACT+TGG | + | chr8.4:15271110-15271129 | MS.gene038701:CDS | 40.0% |
| !!! | TCACTCGGTGTTTACCTTTT+AGG | + | chr8.4:15270728-15270747 | MS.gene038701:CDS | 40.0% |
| ACCGATTACTAAGCCACTTG+TGG | - | chr8.4:15270609-15270628 | None:intergenic | 45.0% | |
| AGCAAACAAACCAAACCAGC+TGG | - | chr8.4:15271427-15271446 | None:intergenic | 45.0% | |
| CTTTATCAGCAATCGGTGAC+TGG | + | chr8.4:15271469-15271488 | MS.gene038701:CDS | 45.0% | |
| GCCACAAGTGGCTTAGTAAT+CGG | + | chr8.4:15270605-15270624 | MS.gene038701:CDS | 45.0% | |
| TATCAACGTTAGCGTGACGA+AGG | - | chr8.4:15270859-15270878 | None:intergenic | 45.0% | |
| ! | AAGAAGAAAACGAGTGCTGC+AGG | - | chr8.4:15270812-15270831 | None:intergenic | 45.0% |
| ! | AGAAGAAAACGAGTGCTGCA+GGG | - | chr8.4:15270811-15270830 | None:intergenic | 45.0% |
| !! | CGATGTGAATGCGTTTTTGG+CGG | + | chr8.4:15271249-15271268 | MS.gene038701:CDS | 45.0% |
| !! | GTTATTCTTGCTGGTGCTGT+TGG | + | chr8.4:15270983-15271002 | MS.gene038701:CDS | 45.0% |
| AACCCCAGTAACGGTAAACG+CGG | - | chr8.4:15271347-15271366 | None:intergenic | 50.0% | |
| ACTCCCAGTACTCGATCTCA+AGG | - | chr8.4:15271224-15271243 | None:intergenic | 50.0% | |
| ACTGCCTTGAGATCGAGTAC+TGG | + | chr8.4:15271217-15271236 | MS.gene038701:CDS | 50.0% | |
| AGCGAGAGCAACAAGAAGAG+GGG | - | chr8.4:15270906-15270925 | None:intergenic | 50.0% | |
| CAACAACACTACGCCACAAG+TGG | + | chr8.4:15270593-15270612 | MS.gene038701:CDS | 50.0% | |
| CAGCAATCGGTGACTGGAAA+TGG | + | chr8.4:15271475-15271494 | MS.gene038701:CDS | 50.0% | |
| CAGCGAGAGCAACAAGAAGA+GGG | - | chr8.4:15270907-15270926 | None:intergenic | 50.0% | |
| CTACCGCGTTTACCGTTACT+GGG | + | chr8.4:15271341-15271360 | MS.gene038701:CDS | 50.0% | |
| CTGCCTTGAGATCGAGTACT+GGG | + | chr8.4:15271218-15271237 | MS.gene038701:CDS | 50.0% | |
| GACTGGAAATGGTTCGCAAC+AGG | + | chr8.4:15271486-15271505 | MS.gene038701:CDS | 50.0% | |
| GATAAGCATGCTAGTCCAGC+TGG | + | chr8.4:15271409-15271428 | MS.gene038701:CDS | 50.0% | |
| GTGACGAAGGAGATTGGTGT+TGG | - | chr8.4:15270846-15270865 | None:intergenic | 50.0% | |
| GTTAGCGTGACGAAGGAGAT+TGG | - | chr8.4:15270852-15270871 | None:intergenic | 50.0% | |
| TACCGCGTTTACCGTTACTG+GGG | + | chr8.4:15271342-15271361 | MS.gene038701:CDS | 50.0% | |
| TCAGCGAGAGCAACAAGAAG+AGG | - | chr8.4:15270908-15270927 | None:intergenic | 50.0% | |
| TGGAAATGGTTCGCAACAGG+CGG | + | chr8.4:15271489-15271508 | MS.gene038701:CDS | 50.0% | |
| CTCGCTGATACTGCGTTTCG+CGG | + | chr8.4:15270920-15270939 | MS.gene038701:CDS | 55.0% | |
| GCATGCTAGTCCAGCTGGTT+TGG | + | chr8.4:15271414-15271433 | MS.gene038701:CDS | 55.0% | |
| GCTACCGCGTTTACCGTTAC+TGG | + | chr8.4:15271340-15271359 | MS.gene038701:CDS | 55.0% | |
| TGGTTCGCAACAGGCGGTTG+TGG | + | chr8.4:15271495-15271514 | MS.gene038701:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.4 | gene | 15270572 | 15271612 | 15270572 | ID=MS.gene038701 |
| chr8.4 | mRNA | 15270572 | 15271612 | 15270572 | ID=MS.gene038701.t1;Parent=MS.gene038701 |
| chr8.4 | exon | 15270572 | 15271612 | 15270572 | ID=MS.gene038701.t1.exon1;Parent=MS.gene038701.t1 |
| chr8.4 | CDS | 15270572 | 15271612 | 15270572 | ID=cds.MS.gene038701.t1;Parent=MS.gene038701.t1 |
| Gene Sequence |
| Protein sequence |
