Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene039961.t1 | XP_003601041.1 | 99.7 | 340 | 1 | 0 | 1 | 340 | 1 | 340 | 5.60E-193 | 683.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene039961.t1 | Q9SFE9 | 83.2 | 340 | 56 | 1 | 1 | 339 | 1 | 340 | 1.3e-161 | 570.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene039961.t1 | G7J2Z9 | 99.7 | 340 | 1 | 0 | 1 | 340 | 1 | 340 | 4.1e-193 | 683.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene039961 | MS.gene008096 | PPI |
MS.gene039961 | MS.gene26662 | PPI |
MS.gene038701 | MS.gene039961 | PPI |
MS.gene039961 | MS.gene007969 | PPI |
MS.gene039961 | MS.gene32026 | PPI |
MS.gene47019 | MS.gene039961 | PPI |
MS.gene039961 | MS.gene47020 | PPI |
MS.gene26384 | MS.gene039961 | PPI |
MS.gene99882 | MS.gene039961 | PPI |
MS.gene011488 | MS.gene039961 | PPI |
MS.gene039961 | MS.gene032018 | PPI |
MS.gene39520 | MS.gene039961 | PPI |
MS.gene69267 | MS.gene039961 | PPI |
MS.gene031892 | MS.gene039961 | PPI |
MS.gene036860 | MS.gene039961 | PPI |
MS.gene26385 | MS.gene039961 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene039961.t1 | MTR_3g072380 | 99.706 | 340 | 1 | 0 | 1 | 340 | 1 | 340 | 0.0 | 688 |
MS.gene039961.t1 | MTR_1g030320 | 87.647 | 340 | 39 | 1 | 3 | 339 | 2 | 341 | 0.0 | 624 |
MS.gene039961.t1 | MTR_3g072380 | 99.476 | 191 | 1 | 0 | 1 | 191 | 1 | 191 | 3.79e-136 | 387 |
MS.gene039961.t1 | MTR_4g018760 | 34.237 | 295 | 192 | 1 | 15 | 307 | 13 | 307 | 1.04e-55 | 184 |
MS.gene039961.t1 | MTR_3g462070 | 35.862 | 290 | 180 | 4 | 22 | 307 | 17 | 304 | 5.36e-53 | 177 |
MS.gene039961.t1 | MTR_5g081710 | 33.333 | 309 | 198 | 2 | 1 | 307 | 1 | 303 | 2.61e-51 | 172 |
MS.gene039961.t1 | MTR_8g090130 | 32.646 | 291 | 188 | 3 | 22 | 307 | 19 | 306 | 1.63e-48 | 165 |
MS.gene039961.t1 | MTR_3g070000 | 33.106 | 293 | 190 | 4 | 19 | 307 | 29 | 319 | 2.01e-48 | 166 |
MS.gene039961.t1 | MTR_4g101860 | 31.186 | 295 | 195 | 3 | 17 | 306 | 55 | 346 | 2.08e-43 | 153 |
MS.gene039961.t1 | MTR_7g110380 | 26.687 | 326 | 229 | 4 | 19 | 339 | 19 | 339 | 1.73e-28 | 114 |
MS.gene039961.t1 | MTR_4g114360 | 23.708 | 329 | 239 | 6 | 12 | 335 | 11 | 332 | 2.28e-27 | 110 |
MS.gene039961.t1 | MTR_2g070400 | 28.662 | 314 | 208 | 8 | 30 | 333 | 26 | 333 | 9.44e-27 | 108 |
MS.gene039961.t1 | MTR_0011s0320 | 23.511 | 319 | 234 | 6 | 22 | 335 | 21 | 334 | 1.59e-26 | 108 |
MS.gene039961.t1 | MTR_4g123900 | 28.793 | 323 | 213 | 6 | 29 | 339 | 25 | 342 | 1.87e-25 | 105 |
MS.gene039961.t1 | MTR_2g038410 | 26.837 | 313 | 209 | 7 | 24 | 326 | 60 | 362 | 7.75e-24 | 101 |
MS.gene039961.t1 | MTR_3g107470 | 22.642 | 318 | 236 | 4 | 22 | 335 | 25 | 336 | 1.16e-23 | 100 |
MS.gene039961.t1 | MTR_3g094270 | 25.325 | 308 | 212 | 6 | 33 | 333 | 29 | 325 | 1.54e-23 | 99.8 |
MS.gene039961.t1 | MTR_2g022700 | 25.839 | 298 | 196 | 6 | 22 | 307 | 111 | 395 | 1.72e-22 | 97.4 |
MS.gene039961.t1 | MTR_3g094260 | 25.329 | 304 | 217 | 4 | 33 | 333 | 29 | 325 | 1.83e-22 | 96.7 |
MS.gene039961.t1 | MTR_0662s0010 | 25.830 | 271 | 191 | 5 | 12 | 277 | 11 | 276 | 3.07e-22 | 94.7 |
MS.gene039961.t1 | MTR_4g058860 | 25.478 | 314 | 223 | 5 | 26 | 335 | 22 | 328 | 3.09e-22 | 96.3 |
MS.gene039961.t1 | MTR_4g123900 | 29.889 | 271 | 180 | 5 | 29 | 294 | 25 | 290 | 9.97e-22 | 94.0 |
MS.gene039961.t1 | MTR_3g049400 | 26.230 | 305 | 186 | 7 | 22 | 307 | 117 | 401 | 1.83e-21 | 94.7 |
MS.gene039961.t1 | MTR_2g094640 | 24.478 | 335 | 242 | 4 | 8 | 339 | 7 | 333 | 3.54e-21 | 93.2 |
MS.gene039961.t1 | MTR_3g077640 | 30.094 | 319 | 186 | 14 | 15 | 311 | 103 | 406 | 3.58e-21 | 94.0 |
MS.gene039961.t1 | MTR_4g088350 | 25.000 | 296 | 210 | 6 | 22 | 312 | 106 | 394 | 1.26e-20 | 92.4 |
MS.gene039961.t1 | MTR_6g005480 | 28.526 | 312 | 192 | 11 | 22 | 318 | 120 | 415 | 1.66e-20 | 92.0 |
MS.gene039961.t1 | MTR_5g044220 | 25.253 | 297 | 208 | 5 | 22 | 312 | 111 | 399 | 3.17e-20 | 91.3 |
MS.gene039961.t1 | MTR_4g105630 | 27.483 | 302 | 199 | 10 | 16 | 308 | 88 | 378 | 4.61e-20 | 90.5 |
MS.gene039961.t1 | MTR_4g131800 | 26.708 | 322 | 184 | 10 | 22 | 306 | 108 | 414 | 1.26e-19 | 90.5 |
MS.gene039961.t1 | MTR_4g105630 | 27.835 | 291 | 190 | 10 | 16 | 297 | 88 | 367 | 2.94e-18 | 85.1 |
MS.gene039961.t1 | MTR_2g029180 | 27.703 | 296 | 203 | 7 | 13 | 302 | 100 | 390 | 7.33e-18 | 84.3 |
MS.gene039961.t1 | MTR_4g088350 | 24.790 | 238 | 173 | 2 | 79 | 312 | 48 | 283 | 1.04e-17 | 82.4 |
MS.gene039961.t1 | MTR_8g016090 | 22.801 | 307 | 227 | 3 | 11 | 307 | 165 | 471 | 6.73e-17 | 82.0 |
MS.gene039961.t1 | MTR_1g098240 | 27.760 | 317 | 203 | 7 | 23 | 328 | 18 | 319 | 8.73e-15 | 74.3 |
MS.gene039961.t1 | MTR_3g096310 | 23.432 | 303 | 216 | 6 | 14 | 306 | 39 | 335 | 1.28e-14 | 74.3 |
MS.gene039961.t1 | MTR_4g105630 | 29.469 | 207 | 128 | 8 | 16 | 215 | 88 | 283 | 1.69e-14 | 73.9 |
MS.gene039961.t1 | MTR_3g095130 | 26.269 | 335 | 210 | 12 | 23 | 338 | 18 | 334 | 1.75e-14 | 73.6 |
MS.gene039961.t1 | MTR_5g096310 | 23.585 | 318 | 224 | 5 | 27 | 337 | 68 | 373 | 2.00e-14 | 73.9 |
MS.gene039961.t1 | MTR_4g105630 | 29.469 | 207 | 128 | 8 | 16 | 215 | 88 | 283 | 2.06e-14 | 73.6 |
MS.gene039961.t1 | MTR_1g026590 | 24.062 | 320 | 226 | 6 | 26 | 338 | 23 | 332 | 9.25e-13 | 68.6 |
MS.gene039961.t1 | MTR_8g092190 | 25.656 | 343 | 210 | 12 | 14 | 338 | 9 | 324 | 3.17e-12 | 67.0 |
MS.gene039961.t1 | MTR_8g442650 | 26.190 | 168 | 116 | 3 | 14 | 178 | 39 | 201 | 5.60e-12 | 65.5 |
MS.gene039961.t1 | MTR_3g096310 | 24.125 | 257 | 181 | 5 | 14 | 261 | 39 | 290 | 8.75e-12 | 65.5 |
MS.gene039961.t1 | MTR_8g016090 | 23.478 | 230 | 170 | 1 | 84 | 307 | 192 | 421 | 2.77e-11 | 64.7 |
MS.gene039961.t1 | MTR_3g095130 | 26.538 | 260 | 163 | 8 | 94 | 338 | 39 | 285 | 8.60e-11 | 62.4 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene039961.t1 | AT1G77610 | 87.977 | 341 | 33 | 3 | 1 | 339 | 1 | 335 | 0.0 | 603 |
MS.gene039961.t1 | AT1G21870 | 86.176 | 340 | 46 | 1 | 1 | 339 | 1 | 340 | 0.0 | 601 |
MS.gene039961.t1 | AT5G05820 | 34.237 | 295 | 184 | 5 | 19 | 307 | 15 | 305 | 2.19e-52 | 175 |
MS.gene039961.t1 | AT5G04160 | 34.354 | 294 | 185 | 3 | 19 | 307 | 16 | 306 | 1.15e-51 | 174 |
MS.gene039961.t1 | AT3G11320 | 33.898 | 295 | 185 | 5 | 19 | 307 | 15 | 305 | 3.35e-51 | 172 |
MS.gene039961.t1 | AT3G10290 | 33.333 | 294 | 188 | 3 | 19 | 307 | 62 | 352 | 7.49e-49 | 167 |
MS.gene039961.t1 | AT1G12500 | 33.553 | 304 | 187 | 5 | 19 | 312 | 63 | 361 | 2.17e-46 | 161 |
MS.gene039961.t1 | AT3G17430 | 30.097 | 309 | 202 | 7 | 29 | 328 | 26 | 329 | 4.53e-30 | 118 |
MS.gene039961.t1 | AT3G17430 | 30.097 | 309 | 202 | 7 | 29 | 328 | 26 | 329 | 4.53e-30 | 118 |
MS.gene039961.t1 | AT2G30460 | 26.623 | 308 | 212 | 6 | 33 | 335 | 29 | 327 | 7.65e-28 | 111 |
MS.gene039961.t1 | AT2G30460 | 26.623 | 308 | 212 | 6 | 33 | 335 | 29 | 327 | 7.65e-28 | 111 |
MS.gene039961.t1 | AT3G14410 | 28.286 | 350 | 226 | 9 | 1 | 338 | 1 | 337 | 1.97e-27 | 110 |
MS.gene039961.t1 | AT1G06890 | 26.230 | 305 | 211 | 6 | 33 | 332 | 29 | 324 | 1.09e-26 | 108 |
MS.gene039961.t1 | AT1G06890 | 26.230 | 305 | 211 | 6 | 33 | 332 | 29 | 324 | 1.09e-26 | 108 |
MS.gene039961.t1 | AT1G06890 | 26.230 | 305 | 211 | 6 | 33 | 332 | 29 | 324 | 1.38e-26 | 108 |
MS.gene039961.t1 | AT1G06890 | 26.230 | 305 | 211 | 6 | 33 | 332 | 29 | 324 | 1.75e-26 | 108 |
MS.gene039961.t1 | AT1G53660 | 27.922 | 308 | 202 | 7 | 19 | 313 | 39 | 339 | 2.32e-26 | 107 |
MS.gene039961.t1 | AT1G53660 | 27.922 | 308 | 202 | 7 | 19 | 313 | 21 | 321 | 2.66e-26 | 107 |
MS.gene039961.t1 | AT2G30460 | 28.862 | 246 | 170 | 3 | 93 | 335 | 63 | 306 | 3.49e-26 | 107 |
MS.gene039961.t1 | AT2G30460 | 28.862 | 246 | 170 | 3 | 93 | 335 | 63 | 306 | 3.49e-26 | 107 |
MS.gene039961.t1 | AT2G30460 | 28.862 | 246 | 170 | 3 | 93 | 335 | 63 | 306 | 3.49e-26 | 107 |
MS.gene039961.t1 | AT1G48230 | 27.761 | 335 | 212 | 7 | 29 | 338 | 26 | 355 | 3.89e-26 | 107 |
MS.gene039961.t1 | AT2G25520 | 24.451 | 319 | 229 | 7 | 22 | 335 | 25 | 336 | 9.26e-26 | 105 |
MS.gene039961.t1 | AT4G32390 | 25.517 | 290 | 206 | 5 | 22 | 306 | 25 | 309 | 1.05e-25 | 105 |
MS.gene039961.t1 | AT5G25400 | 24.585 | 301 | 217 | 6 | 11 | 306 | 14 | 309 | 2.13e-25 | 105 |
MS.gene039961.t1 | AT5G11230 | 25.862 | 290 | 205 | 6 | 22 | 306 | 25 | 309 | 2.33e-25 | 105 |
MS.gene039961.t1 | AT1G53660 | 27.304 | 293 | 193 | 7 | 34 | 313 | 2 | 287 | 1.69e-24 | 101 |
MS.gene039961.t1 | AT5G54800 | 26.441 | 295 | 196 | 6 | 22 | 306 | 104 | 387 | 3.79e-23 | 99.4 |
MS.gene039961.t1 | AT5G57100 | 26.117 | 291 | 196 | 6 | 24 | 305 | 69 | 349 | 3.17e-22 | 96.7 |
MS.gene039961.t1 | AT3G01550 | 27.090 | 299 | 208 | 6 | 22 | 314 | 86 | 380 | 2.22e-21 | 94.4 |
MS.gene039961.t1 | AT1G06470 | 24.194 | 310 | 219 | 5 | 11 | 307 | 71 | 377 | 1.02e-20 | 92.8 |
MS.gene039961.t1 | AT1G06470 | 24.194 | 310 | 219 | 5 | 11 | 307 | 71 | 377 | 1.02e-20 | 92.8 |
MS.gene039961.t1 | AT1G06470 | 24.194 | 310 | 219 | 5 | 11 | 307 | 71 | 377 | 1.02e-20 | 92.8 |
MS.gene039961.t1 | AT1G06470 | 24.194 | 310 | 219 | 5 | 11 | 307 | 71 | 377 | 1.02e-20 | 92.8 |
MS.gene039961.t1 | AT1G61800 | 26.159 | 302 | 190 | 7 | 22 | 307 | 104 | 388 | 1.16e-20 | 92.4 |
MS.gene039961.t1 | AT1G61800 | 26.578 | 301 | 188 | 7 | 22 | 306 | 104 | 387 | 1.68e-20 | 92.0 |
MS.gene039961.t1 | AT1G48230 | 27.698 | 278 | 173 | 6 | 84 | 338 | 10 | 282 | 6.66e-20 | 89.0 |
MS.gene039961.t1 | AT2G28315 | 24.290 | 317 | 227 | 4 | 26 | 338 | 22 | 329 | 8.37e-20 | 89.4 |
MS.gene039961.t1 | AT1G53660 | 29.060 | 234 | 149 | 5 | 90 | 313 | 1 | 227 | 2.80e-19 | 85.9 |
MS.gene039961.t1 | AT5G46110 | 25.000 | 320 | 207 | 10 | 22 | 328 | 115 | 414 | 1.78e-18 | 86.3 |
MS.gene039961.t1 | AT5G46110 | 24.590 | 305 | 200 | 8 | 22 | 312 | 2 | 290 | 2.00e-18 | 84.7 |
MS.gene039961.t1 | AT5G46110 | 25.000 | 304 | 200 | 9 | 22 | 312 | 115 | 403 | 3.79e-18 | 85.1 |
MS.gene039961.t1 | AT5G17630 | 29.327 | 208 | 141 | 3 | 100 | 302 | 193 | 399 | 6.19e-18 | 84.7 |
MS.gene039961.t1 | AT2G28315 | 25.442 | 283 | 198 | 4 | 26 | 304 | 22 | 295 | 8.86e-18 | 83.2 |
MS.gene039961.t1 | AT5G33320 | 28.808 | 302 | 191 | 12 | 17 | 306 | 110 | 399 | 2.54e-17 | 82.8 |
MS.gene039961.t1 | AT3G01550 | 26.087 | 299 | 206 | 7 | 22 | 314 | 86 | 375 | 1.11e-16 | 80.5 |
MS.gene039961.t1 | AT1G21070 | 25.077 | 323 | 229 | 6 | 23 | 338 | 19 | 335 | 3.39e-16 | 79.0 |
MS.gene039961.t1 | AT1G76670 | 25.298 | 336 | 230 | 8 | 14 | 338 | 9 | 334 | 8.43e-16 | 77.8 |
MS.gene039961.t1 | AT1G76670 | 25.298 | 336 | 230 | 8 | 14 | 338 | 9 | 334 | 8.43e-16 | 77.8 |
MS.gene039961.t1 | AT5G55950 | 22.857 | 315 | 220 | 7 | 27 | 328 | 9 | 313 | 2.61e-15 | 76.3 |
MS.gene039961.t1 | AT5G57100 | 27.155 | 232 | 152 | 5 | 24 | 242 | 69 | 296 | 3.02e-15 | 75.5 |
MS.gene039961.t1 | AT5G55950 | 22.857 | 315 | 220 | 7 | 27 | 328 | 69 | 373 | 4.62e-15 | 75.9 |
MS.gene039961.t1 | AT5G57100 | 28.834 | 163 | 105 | 3 | 24 | 179 | 69 | 227 | 2.26e-14 | 72.8 |
MS.gene039961.t1 | AT5G46110 | 24.013 | 304 | 192 | 10 | 22 | 312 | 115 | 392 | 2.73e-14 | 73.6 |
MS.gene039961.t1 | AT1G34020 | 23.853 | 327 | 227 | 7 | 23 | 339 | 18 | 332 | 2.24e-13 | 70.5 |
MS.gene039961.t1 | AT1G34020 | 23.853 | 327 | 227 | 7 | 23 | 339 | 18 | 332 | 2.24e-13 | 70.5 |
MS.gene039961.t1 | AT1G34020 | 23.853 | 327 | 227 | 7 | 23 | 339 | 18 | 332 | 2.24e-13 | 70.5 |
MS.gene039961.t1 | AT5G42420 | 24.159 | 327 | 227 | 9 | 23 | 337 | 19 | 336 | 2.28e-13 | 70.5 |
MS.gene039961.t1 | AT1G53660 | 26.203 | 187 | 133 | 3 | 19 | 200 | 39 | 225 | 2.62e-13 | 69.3 |
MS.gene039961.t1 | AT5G55950 | 22.442 | 303 | 212 | 7 | 39 | 328 | 3 | 295 | 9.24e-13 | 68.6 |
MS.gene039961.t1 | AT2G13650 | 21.782 | 303 | 221 | 5 | 14 | 306 | 32 | 328 | 1.32e-12 | 68.2 |
MS.gene039961.t1 | AT2G13650 | 21.782 | 303 | 221 | 5 | 14 | 306 | 32 | 328 | 1.32e-12 | 68.2 |
MS.gene039961.t1 | AT2G30460 | 25.366 | 205 | 142 | 4 | 33 | 235 | 29 | 224 | 1.34e-12 | 68.2 |
MS.gene039961.t1 | AT4G09810 | 24.096 | 332 | 220 | 10 | 23 | 339 | 18 | 332 | 1.90e-12 | 67.8 |
MS.gene039961.t1 | AT4G39390 | 23.385 | 325 | 229 | 6 | 23 | 338 | 19 | 332 | 2.32e-12 | 67.4 |
MS.gene039961.t1 | AT4G39390 | 23.385 | 325 | 229 | 6 | 23 | 338 | 23 | 336 | 2.59e-12 | 67.4 |
MS.gene039961.t1 | AT4G39390 | 23.385 | 325 | 229 | 6 | 23 | 338 | 23 | 336 | 2.59e-12 | 67.4 |
MS.gene039961.t1 | AT2G14695 | 25.103 | 243 | 172 | 5 | 70 | 307 | 106 | 343 | 3.61e-11 | 63.9 |
Find 76 sgRNAs with CRISPR-Local
Find 522 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGTTTCTTGGCTGATATTT+AGG | 0.172542 | 3.1:+59284718 | MS.gene039961:CDS |
CAGTTGCTGTCCTTGTTTCT+TGG | 0.199982 | 3.1:+59284706 | MS.gene039961:CDS |
CTTGTGGGTTGTACATTCTA+TGG | 0.283551 | 3.1:+59284783 | MS.gene039961:CDS |
CTTCTCTTATACCCATTGTT+GGG | 0.300758 | 3.1:+59280886 | MS.gene039961:CDS |
TGGAGCATATATAGTAATTA+AGG | 0.308491 | 3.1:+59280560 | MS.gene039961:CDS |
GAGATGAGCTTTAATATGTT+TGG | 0.318183 | 3.1:+59280933 | MS.gene039961:CDS |
CGAGGGGTCCGAGGAGTTCC+TGG | 0.326816 | 3.1:-59284843 | None:intergenic |
ATTGTCTGCATAAAAGAAAC+TGG | 0.334946 | 3.1:-59280702 | None:intergenic |
GCTGTAACATTTAACGTTGC+TGG | 0.348474 | 3.1:+59284393 | MS.gene039961:CDS |
ATGAGAGCCGACCAAGGATA+TGG | 0.352270 | 3.1:-59284297 | None:intergenic |
GCTTCTCTTATACCCATTGT+TGG | 0.360259 | 3.1:+59280885 | MS.gene039961:CDS |
TCCTGGAACTGGTGGTTGTT+GGG | 0.360715 | 3.1:-59284826 | None:intergenic |
ACAGCATTTAAATATGAGAT+TGG | 0.361357 | 3.1:-59284744 | None:intergenic |
CGTTAACAAGTGGATCTTCC+AGG | 0.363174 | 3.1:+59278592 | MS.gene039961:CDS |
CACTTTATCTGCTCAGCCAT+TGG | 0.366007 | 3.1:+59280540 | MS.gene039961:CDS |
TTCCTGGAACTGGTGGTTGT+TGG | 0.369159 | 3.1:-59284827 | None:intergenic |
TGCGGCCTTACTTGGCTGTT+TGG | 0.374934 | 3.1:+59280962 | MS.gene039961:CDS |
CTCTCTTGTGTATTCTTCAA+TGG | 0.386936 | 3.1:+59278543 | MS.gene039961:CDS |
TGAACCTTACCGGTGGTTGC+AGG | 0.387718 | 3.1:-59280738 | None:intergenic |
CATAAACACGGTTTATTACA+TGG | 0.390132 | 3.1:+59284194 | MS.gene039961:CDS |
TCCCAACAACCACCAGTTCC+AGG | 0.397433 | 3.1:+59284825 | MS.gene039961:CDS |
AGTGGACACATGATACTGAT+AGG | 0.407310 | 3.1:-59280521 | None:intergenic |
GTCCGAGGAGTTCCTGGAAC+TGG | 0.411031 | 3.1:-59284837 | None:intergenic |
CAGCATTTAAATATGAGATT+GGG | 0.422316 | 3.1:-59284743 | None:intergenic |
TAACGTTGCTGGGAACCTTA+AGG | 0.422563 | 3.1:+59284404 | MS.gene039961:CDS |
ATCTCATATTTAAATGCTGT+TGG | 0.434631 | 3.1:+59284747 | MS.gene039961:CDS |
CTCCCTGCCATGTTACTTGA+AGG | 0.451026 | 3.1:+59284243 | MS.gene039961:CDS |
AAGGCAATGGAGTTCTTGAA+TGG | 0.459783 | 3.1:+59284262 | MS.gene039961:CDS |
GGATGTGCCATCACTCTTGT+GGG | 0.463559 | 3.1:+59284768 | MS.gene039961:CDS |
CTGTAACATTTAACGTTGCT+GGG | 0.466155 | 3.1:+59284394 | MS.gene039961:CDS |
TTCTCTTATACCCATTGTTG+GGG | 0.482452 | 3.1:+59280887 | MS.gene039961:CDS |
TGCATGGATACAAATTTGAC+AGG | 0.483890 | 3.1:+59281021 | MS.gene039961:CDS |
CTCTTATACCCATTGTTGGG+GGG | 0.488226 | 3.1:+59280889 | MS.gene039961:CDS |
TGGATGTGCCATCACTCTTG+TGG | 0.493073 | 3.1:+59284767 | MS.gene039961:CDS |
ACCTTATGCGACCATGATCT+TGG | 0.497027 | 3.1:+59284218 | MS.gene039961:CDS |
ACCAAGATCATGGTCGCATA+AGG | 0.498204 | 3.1:-59284219 | None:intergenic |
TTAATACTCATCCATATCCT+TGG | 0.501248 | 3.1:+59284286 | MS.gene039961:CDS |
GTTCTGCATTAACATAGTGC+TGG | 0.501769 | 3.1:+59280656 | MS.gene039961:CDS |
TCGGACCCCTCGGAGTAAGA+TGG | 0.510607 | 3.1:+59284854 | MS.gene039961:CDS |
GAGATCTGATTACGCTCCAT+TGG | 0.511266 | 3.1:-59278523 | None:intergenic |
GTGGACACATGATACTGATA+GGG | 0.518687 | 3.1:-59280520 | None:intergenic |
TGTAGCCAAACAGCCAAGTA+AGG | 0.519706 | 3.1:-59280967 | None:intergenic |
CTGTTGACCCTGAAGATCGC+TGG | 0.528072 | 3.1:+59280607 | MS.gene039961:CDS |
GGCAGGGAGCACCAAGATCA+TGG | 0.529268 | 3.1:-59284229 | None:intergenic |
TCTTGTGTATTCTTCAATGG+TGG | 0.529500 | 3.1:+59278546 | MS.gene039961:CDS |
CAGGAACTCCTCGGACCCCT+CGG | 0.529703 | 3.1:+59284844 | MS.gene039961:CDS |
TTGCCTTCAAGTAACATGGC+AGG | 0.534660 | 3.1:-59284246 | None:intergenic |
AATTACTATATATGCTCCAA+TGG | 0.545994 | 3.1:-59280556 | None:intergenic |
ATCTTACTCCGAGGGGTCCG+AGG | 0.547102 | 3.1:-59284852 | None:intergenic |
TTCTGCATTAACATAGTGCT+GGG | 0.548461 | 3.1:+59280657 | MS.gene039961:CDS |
CAATGGCTGAGCAGATAAAG+TGG | 0.552939 | 3.1:-59280539 | None:intergenic |
TCTCTTATACCCATTGTTGG+GGG | 0.557262 | 3.1:+59280888 | MS.gene039961:CDS |
GTTAAATGTTACAGCAGTAG+TGG | 0.561669 | 3.1:-59284385 | None:intergenic |
CCACTTGTTAACGATGATAA+CGG | 0.564606 | 3.1:-59278582 | None:intergenic |
TACTCATCCATATCCTTGGT+CGG | 0.568792 | 3.1:+59284290 | MS.gene039961:CDS |
CCGTTATCATCGTTAACAAG+TGG | 0.571211 | 3.1:+59278582 | MS.gene039961:CDS |
CACCAGTTCCAGGAACTCCT+CGG | 0.575486 | 3.1:+59284835 | MS.gene039961:CDS |
CGAGGAGTTCCTGGAACTGG+TGG | 0.584220 | 3.1:-59284834 | None:intergenic |
TGCCTTCAAGTAACATGGCA+GGG | 0.584848 | 3.1:-59284245 | None:intergenic |
GCGACTCCATCTTACTCCGA+GGG | 0.596641 | 3.1:-59284860 | None:intergenic |
TCCATTGCCTTCAAGTAACA+TGG | 0.603049 | 3.1:-59284250 | None:intergenic |
ATGTTACAGCAGTAGTGGAG+TGG | 0.611069 | 3.1:-59284380 | None:intergenic |
TCATTCACACCTGCAACCAC+CGG | 0.612110 | 3.1:+59280729 | MS.gene039961:CDS |
TCAGGGTCAACAGTTATCAG+TGG | 0.612864 | 3.1:-59280597 | None:intergenic |
TGTACAACCCACAAGAGTGA+TGG | 0.617011 | 3.1:-59284775 | None:intergenic |
TCTAATTTATCATTTACAAG+TGG | 0.619629 | 3.1:-59284885 | None:intergenic |
TAAATATCAGCCAAGAAACA+AGG | 0.621563 | 3.1:-59284716 | None:intergenic |
TGTTATCTTTAGCATAAACA+CGG | 0.629294 | 3.1:+59284182 | MS.gene039961:intron |
GCCATGTTACTTGAAGGCAA+TGG | 0.641369 | 3.1:+59284249 | MS.gene039961:CDS |
CATGCAAAAGAGATTCTGCA+AGG | 0.649521 | 3.1:-59281004 | None:intergenic |
ATGCAGAACACAAATGACAT+CGG | 0.665514 | 3.1:-59280642 | None:intergenic |
AGCGACTCCATCTTACTCCG+AGG | 0.670016 | 3.1:-59284861 | None:intergenic |
TGGACACATGATACTGATAG+GGG | 0.672246 | 3.1:-59280519 | None:intergenic |
ATAATGATGAGAGCCGACCA+AGG | 0.678882 | 3.1:-59284303 | None:intergenic |
CGACTCCATCTTACTCCGAG+GGG | 0.710097 | 3.1:-59284859 | None:intergenic |
TCTGCATTAACATAGTGCTG+GGG | 0.737412 | 3.1:+59280658 | MS.gene039961:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | TTATTATTTTATTTTTTTTT+TGG | + | chr3.1:59280190-59280209 | MS.gene039961:intron | 0.0% |
!! | ATTGTAAAATGAATTAAAAA+TGG | + | chr3.1:59279956-59279975 | MS.gene039961:intron | 10.0% |
!! | TATCCAATAATATTTAATAA+TGG | + | chr3.1:59283344-59283363 | MS.gene039961:intron | 10.0% |
!!! | TATTTTCAATAAATAAATAG+GGG | - | chr3.1:59282353-59282372 | None:intergenic | 10.0% |
!! | ACGAATATATTTAATATAGA+AGG | + | chr3.1:59281475-59281494 | MS.gene039961:intron | 15.0% |
!! | ATACTGAAAAATATAGTTAT+TGG | - | chr3.1:59284456-59284475 | None:intergenic | 15.0% |
!! | CTAAAATTCAATGAATTTAA+AGG | - | chr3.1:59278981-59279000 | None:intergenic | 15.0% |
!! | GCTTAAAAAAATAGAATAAA+TGG | - | chr3.1:59279378-59279397 | None:intergenic | 15.0% |
!! | GTAAATTTAGTAAAAAAGAA+TGG | - | chr3.1:59278630-59278649 | None:intergenic | 15.0% |
!! | TAAAAGATGAAAGAAATATT+CGG | - | chr3.1:59284002-59284021 | None:intergenic | 15.0% |
!! | TCTATAAACAAAAAATTATG+AGG | + | chr3.1:59280263-59280282 | MS.gene039961:intron | 15.0% |
!! | TGTTTAATTAATAATCTTCA+GGG | + | chr3.1:59283106-59283125 | MS.gene039961:intron | 15.0% |
!!! | ACATTTTGTATTTTTCTTTT+TGG | + | chr3.1:59283871-59283890 | MS.gene039961:intron | 15.0% |
!!! | ATTGATTTTAAATCAATCTT+GGG | + | chr3.1:59279686-59279705 | MS.gene039961:intron | 15.0% |
!!! | TATTTGTTAATTGCTATTTT+TGG | + | chr3.1:59278950-59278969 | MS.gene039961:intron | 15.0% |
!! | AAAAGATGAAAGAAATATTC+GGG | - | chr3.1:59284001-59284020 | None:intergenic | 20.0% |
!! | AAGAAGGGAATTATATTTAA+AGG | + | chr3.1:59280217-59280236 | MS.gene039961:intron | 20.0% |
!! | ATTATTGAATGTTATTGTTG+AGG | + | chr3.1:59284586-59284605 | MS.gene039961:intron | 20.0% |
!! | GGTCCATTATTAAATATTAT+TGG | - | chr3.1:59283350-59283369 | None:intergenic | 20.0% |
!! | GTGTTTAATTAATAATCTTC+AGG | + | chr3.1:59283105-59283124 | MS.gene039961:intron | 20.0% |
!! | TATTAATTTCTGAACAAGTA+TGG | + | chr3.1:59279999-59280018 | MS.gene039961:intron | 20.0% |
!! | TCTAATTTATCATTTACAAG+TGG | - | chr3.1:59284888-59284907 | None:intergenic | 20.0% |
!! | TTTAAAGGATTCTTTAATGA+TGG | + | chr3.1:59280232-59280251 | MS.gene039961:intron | 20.0% |
!!! | AACACATTGAATAATTTTGA+AGG | - | chr3.1:59282275-59282294 | None:intergenic | 20.0% |
!!! | ATGTTTTTCTAATTAAAACC+AGG | + | chr3.1:59283595-59283614 | MS.gene039961:intron | 20.0% |
!!! | GAAATGTATCATTTTTCTTA+TGG | + | chr3.1:59280044-59280063 | MS.gene039961:intron | 20.0% |
!!! | GATTGATTTTAAATCAATCT+TGG | + | chr3.1:59279685-59279704 | MS.gene039961:intron | 20.0% |
!!! | GTTTTTTTCTTAGCATATTT+TGG | - | chr3.1:59279740-59279759 | None:intergenic | 20.0% |
!!! | TCATCATTATTTTTAGTTCT+GGG | + | chr3.1:59284316-59284335 | MS.gene039961:CDS | 20.0% |
!!! | TTCAGAAATTTTTACTTTCT+TGG | + | chr3.1:59282142-59282161 | MS.gene039961:intron | 20.0% |
!!! | TTGATTTAAAATCAATCATC+TGG | - | chr3.1:59279682-59279701 | None:intergenic | 20.0% |
!!! | TTTTTTTTTGGAGAAAAGAA+GGG | + | chr3.1:59280202-59280221 | MS.gene039961:intron | 20.0% |
!!! | TTTTTTTTTTGGAGAAAAGA+AGG | + | chr3.1:59280201-59280220 | MS.gene039961:intron | 20.0% |
! | AAGTAATCGAAAAAAAGTCT+AGG | - | chr3.1:59284034-59284053 | None:intergenic | 25.0% |
! | AATACTGACACAAAAATAAC+AGG | - | chr3.1:59281164-59281183 | None:intergenic | 25.0% |
! | AATTACTATATATGCTCCAA+TGG | - | chr3.1:59280559-59280578 | None:intergenic | 25.0% |
! | ACAGCATTTAAATATGAGAT+TGG | - | chr3.1:59284747-59284766 | None:intergenic | 25.0% |
! | ACTATTATTGCATTTCATTG+TGG | - | chr3.1:59283786-59283805 | None:intergenic | 25.0% |
! | AGATAAATGCAAGGAATAAA+AGG | - | chr3.1:59284064-59284083 | None:intergenic | 25.0% |
! | ATCTCATATTTAAATGCTGT+TGG | + | chr3.1:59284747-59284766 | MS.gene039961:CDS | 25.0% |
! | CAGCATTTAAATATGAGATT+GGG | - | chr3.1:59284746-59284765 | None:intergenic | 25.0% |
! | CTAAAGTTTGAATATAAAGC+CGG | - | chr3.1:59280781-59280800 | None:intergenic | 25.0% |
! | GAAAGTAAAAATTTCTGAAC+AGG | - | chr3.1:59282141-59282160 | None:intergenic | 25.0% |
! | GAGTAAGAAATCATAAATGA+AGG | - | chr3.1:59281910-59281929 | None:intergenic | 25.0% |
! | TACTATGATCAATGATGATT+GGG | - | chr3.1:59280426-59280445 | None:intergenic | 25.0% |
! | TATAATAGAGAAATGCTTTG+TGG | + | chr3.1:59283508-59283527 | MS.gene039961:intron | 25.0% |
! | TCAATAAATAAATAGGGGAT+TGG | - | chr3.1:59282348-59282367 | None:intergenic | 25.0% |
! | TCTTGTGATTATAATCATCT+AGG | - | chr3.1:59280290-59280309 | None:intergenic | 25.0% |
! | TGAACTTATTGCAAAATACT+TGG | + | chr3.1:59283730-59283749 | MS.gene039961:intron | 25.0% |
! | TGGAGCATATATAGTAATTA+AGG | + | chr3.1:59280560-59280579 | MS.gene039961:CDS | 25.0% |
! | TGTTATCTTTAGCATAAACA+CGG | + | chr3.1:59284182-59284201 | MS.gene039961:intron | 25.0% |
! | TTACTATGATCAATGATGAT+TGG | - | chr3.1:59280427-59280446 | None:intergenic | 25.0% |
! | TTATTGGGTCAACAATAAAA+AGG | + | chr3.1:59281561-59281580 | MS.gene039961:intron | 25.0% |
! | TTCTCTACATCAATATCTTT+AGG | - | chr3.1:59283247-59283266 | None:intergenic | 25.0% |
! | TTGGTATTCTTTGTATCTTT+CGG | - | chr3.1:59282456-59282475 | None:intergenic | 25.0% |
! | TTTATTGTTGACCCAATAAT+TGG | - | chr3.1:59281560-59281579 | None:intergenic | 25.0% |
! | TTTGTACTCTATAAATGTGT+TGG | + | chr3.1:59284100-59284119 | MS.gene039961:intron | 25.0% |
!! | AAAAATGATTTCAGGTGAAT+TGG | + | chr3.1:59279036-59279055 | MS.gene039961:intron | 25.0% |
!! | AAATATTTTATGAGGAGCTT+AGG | + | chr3.1:59281737-59281756 | MS.gene039961:intron | 25.0% |
!! | AAGATAAAGTGATTTGTCTT+TGG | + | chr3.1:59279133-59279152 | MS.gene039961:intron | 25.0% |
!! | AATTGAATTTAGAGTTAGGT+TGG | - | chr3.1:59282594-59282613 | None:intergenic | 25.0% |
!! | AGAATATTTTCATCTGATCT+TGG | + | chr3.1:59280799-59280818 | MS.gene039961:intron | 25.0% |
!! | AGAATTGATTCAAACTTGTT+TGG | - | chr3.1:59279287-59279306 | None:intergenic | 25.0% |
!! | AGGAATTTTAAATACCAATG+TGG | - | chr3.1:59280387-59280406 | None:intergenic | 25.0% |
!! | ATTGAATTTAGAGTTAGGTT+GGG | - | chr3.1:59282593-59282612 | None:intergenic | 25.0% |
!! | CTTGAATTGAATTTAGAGTT+AGG | - | chr3.1:59282598-59282617 | None:intergenic | 25.0% |
!! | GAATTAAAAATGGTCTTGAT+AGG | + | chr3.1:59279966-59279985 | MS.gene039961:intron | 25.0% |
!! | GTTTTTCTACTATGTATGTT+TGG | + | chr3.1:59279000-59279019 | MS.gene039961:intron | 25.0% |
!! | TAATATGTTTGGATTTTGTG+CGG | + | chr3.1:59280944-59280963 | MS.gene039961:CDS | 25.0% |
!! | TGGGAAGAAAATATTTTATG+AGG | + | chr3.1:59281729-59281748 | MS.gene039961:intron | 25.0% |
!! | TGTTTTCTATTTGCAGAAAT+TGG | + | chr3.1:59280485-59280504 | MS.gene039961:intron | 25.0% |
!! | TTCATTTTATAGCGAAGAAA+AGG | + | chr3.1:59280334-59280353 | MS.gene039961:intron | 25.0% |
!! | TTTTAACATTCAAATACTCC+TGG | + | chr3.1:59284475-59284494 | MS.gene039961:intron | 25.0% |
!!! | AAGACCTTTTTAAGATACAT+TGG | - | chr3.1:59280084-59280103 | None:intergenic | 25.0% |
!!! | AATATTTAATAATGGACCAC+TGG | + | chr3.1:59283352-59283371 | MS.gene039961:intron | 25.0% |
!!! | AATCATCTAATTTTTAGCCA+CGG | - | chr3.1:59282630-59282649 | None:intergenic | 25.0% |
!!! | AGACCTTTTTAAGATACATT+GGG | - | chr3.1:59280083-59280102 | None:intergenic | 25.0% |
!!! | ATCATTTTTCTTATGGAGAT+TGG | + | chr3.1:59280051-59280070 | MS.gene039961:intron | 25.0% |
!!! | CATCATTATTTTTAGTTCTG+GGG | + | chr3.1:59284317-59284336 | MS.gene039961:CDS | 25.0% |
!!! | CTCATCATTATTTTTAGTTC+TGG | + | chr3.1:59284315-59284334 | MS.gene039961:CDS | 25.0% |
!!! | TAAAAAGGTCTTTGTTTTGA+TGG | + | chr3.1:59280092-59280111 | MS.gene039961:intron | 25.0% |
!!! | TGCACAAAATCTTTTGTTTT+TGG | + | chr3.1:59279350-59279369 | MS.gene039961:intron | 25.0% |
!!! | TTTGTTTTGATGGTCAAAAA+AGG | + | chr3.1:59280102-59280121 | MS.gene039961:intron | 25.0% |
AAAAGGATTCTCCTTCAAAT+TGG | + | chr3.1:59282923-59282942 | MS.gene039961:intron | 30.0% | |
AAAATCTAGACATGTGAAGA+AGG | - | chr3.1:59281941-59281960 | None:intergenic | 30.0% | |
AAACTATCAAACCCATTGAA+TGG | + | chr3.1:59283683-59283702 | MS.gene039961:intron | 30.0% | |
AAATCTAGACATGTGAAGAA+GGG | - | chr3.1:59281940-59281959 | None:intergenic | 30.0% | |
AACCTGTACAAAAAACATGA+TGG | - | chr3.1:59284685-59284704 | None:intergenic | 30.0% | |
AATTGCACTAACCATTTCAA+GGG | + | chr3.1:59283169-59283188 | MS.gene039961:intron | 30.0% | |
AATTTACATTCACTATGCAG+AGG | - | chr3.1:59283440-59283459 | None:intergenic | 30.0% | |
ACACAAAAATAACAGGTATG+TGG | - | chr3.1:59281157-59281176 | None:intergenic | 30.0% | |
ACTATGTATGTTTGGTTATG+CGG | + | chr3.1:59279008-59279027 | MS.gene039961:intron | 30.0% | |
ATAAATAAATAGGGGATTGG+AGG | - | chr3.1:59282345-59282364 | None:intergenic | 30.0% | |
ATGGTGCAATTTCAATTTGA+TGG | - | chr3.1:59281880-59281899 | None:intergenic | 30.0% | |
ATTGCTTGTATTGAGTTTGA+AGG | - | chr3.1:59282883-59282902 | None:intergenic | 30.0% | |
ATTGTCTGCATAAAAGAAAC+TGG | - | chr3.1:59280705-59280724 | None:intergenic | 30.0% | |
CATAAACACGGTTTATTACA+TGG | + | chr3.1:59284194-59284213 | MS.gene039961:CDS | 30.0% | |
CATAAATGAAGGAATGAGTA+TGG | - | chr3.1:59281899-59281918 | None:intergenic | 30.0% | |
CTAATACCAACTCCTTATAA+TGG | + | chr3.1:59281195-59281214 | MS.gene039961:intron | 30.0% | |
CTATCATATATTACCACCAA+TGG | + | chr3.1:59283831-59283850 | MS.gene039961:intron | 30.0% | |
GATCATAGTAAAGACTTCTA+TGG | + | chr3.1:59280436-59280455 | MS.gene039961:intron | 30.0% | |
GTCTTATATATCTCACCTTA+AGG | - | chr3.1:59284422-59284441 | None:intergenic | 30.0% | |
TAAAAGATCATTTGACACAC+AGG | - | chr3.1:59283953-59283972 | None:intergenic | 30.0% | |
TAAATAAATAGGGGATTGGA+GGG | - | chr3.1:59282344-59282363 | None:intergenic | 30.0% | |
TAAATATCAGCCAAGAAACA+AGG | - | chr3.1:59284719-59284738 | None:intergenic | 30.0% | |
TATTGTTGAGGTAGTATAGT+GGG | + | chr3.1:59284598-59284617 | MS.gene039961:intron | 30.0% | |
TCAGTTACTTAACACAATCA+AGG | - | chr3.1:59281607-59281626 | None:intergenic | 30.0% | |
TCGATTCTTTAAGCATTCTT+AGG | + | chr3.1:59278718-59278737 | MS.gene039961:intron | 30.0% | |
TCTCCCAATGTATCTTAAAA+AGG | + | chr3.1:59280077-59280096 | MS.gene039961:intron | 30.0% | |
TGAATTGAAACCAATTAACC+AGG | - | chr3.1:59284496-59284515 | None:intergenic | 30.0% | |
TGTATACATGGAGAGAAAAA+AGG | + | chr3.1:59281689-59281708 | MS.gene039961:intron | 30.0% | |
TTAATACTCATCCATATCCT+TGG | + | chr3.1:59284286-59284305 | MS.gene039961:CDS | 30.0% | |
TTATTGTTGAGGTAGTATAG+TGG | + | chr3.1:59284597-59284616 | MS.gene039961:intron | 30.0% | |
TTCAAATACTCCTGGTTAAT+TGG | + | chr3.1:59284483-59284502 | MS.gene039961:intron | 30.0% | |
TTGATTGTGTTAAGTAACTG+AGG | + | chr3.1:59281606-59281625 | MS.gene039961:intron | 30.0% | |
! | ACAAAAGATTTTGTGCATGT+TGG | - | chr3.1:59279347-59279366 | None:intergenic | 30.0% |
! | AGCTTTCAAGTAGAATCAAT+TGG | + | chr3.1:59279233-59279252 | MS.gene039961:intron | 30.0% |
! | ATTGATTCTACTTGAAAGCT+AGG | - | chr3.1:59279233-59279252 | None:intergenic | 30.0% |
! | ATTTAAGACAGGTGTATACA+TGG | + | chr3.1:59281677-59281696 | MS.gene039961:intron | 30.0% |
! | CATTGATAATAATGCCTTAC+CGG | + | chr3.1:59281850-59281869 | MS.gene039961:intron | 30.0% |
! | CTGCATTTTCATTAAAACCA+CGG | - | chr3.1:59281512-59281531 | None:intergenic | 30.0% |
! | GAGATGAGCTTTAATATGTT+TGG | + | chr3.1:59280933-59280952 | MS.gene039961:CDS | 30.0% |
! | GGTTAATTGGTTTCAATTCA+TGG | + | chr3.1:59284496-59284515 | MS.gene039961:intron | 30.0% |
! | GTTTGATAGTTTATACCCAT+CGG | - | chr3.1:59283675-59283694 | None:intergenic | 30.0% |
! | TGCATTTTCATTAAAACCAC+GGG | - | chr3.1:59281511-59281530 | None:intergenic | 30.0% |
! | TTAAAAATGGTCTTGATAGG+TGG | + | chr3.1:59279969-59279988 | MS.gene039961:intron | 30.0% |
! | TTAAATACCAATGTGGATTG+TGG | - | chr3.1:59280380-59280399 | None:intergenic | 30.0% |
! | TTGTTTCTTGGCTGATATTT+AGG | + | chr3.1:59284718-59284737 | MS.gene039961:CDS | 30.0% |
! | TTTCAAGTAGAATCAATTGG+AGG | + | chr3.1:59279236-59279255 | MS.gene039961:intron | 30.0% |
! | TTTTCTCGGATTTGAAAACT+CGG | + | chr3.1:59279607-59279626 | MS.gene039961:intron | 30.0% |
!! | CTAATGATGTCGATTGTTTT+AGG | + | chr3.1:59278869-59278888 | MS.gene039961:intron | 30.0% |
!! | GACTAGGAAGTATTCTATAT+TGG | + | chr3.1:59281284-59281303 | MS.gene039961:intron | 30.0% |
!! | TTTCTTTTCTCTAACTTGTC+TGG | + | chr3.1:59281102-59281121 | MS.gene039961:intron | 30.0% |
!!! | AAAACTCTGTTGTTTTCCAA+TGG | + | chr3.1:59278507-59278526 | MS.gene039961:CDS | 30.0% |
!!! | AACCATCATGTTTTTTGTAC+AGG | + | chr3.1:59284680-59284699 | MS.gene039961:intron | 30.0% |
!!! | AATATTTTGACTGGCGTATT+TGG | + | chr3.1:59280862-59280881 | MS.gene039961:CDS | 30.0% |
!!! | ATATTTTGACTGGCGTATTT+GGG | + | chr3.1:59280863-59280882 | MS.gene039961:CDS | 30.0% |
AAAACCAAAAATCCGCCATA+TGG | - | chr3.1:59279860-59279879 | None:intergenic | 35.0% | |
AAAGCCTGTTGTCCATTATA+AGG | - | chr3.1:59281210-59281229 | None:intergenic | 35.0% | |
AAATAATAACAACCCCCTTC+CGG | - | chr3.1:59280179-59280198 | None:intergenic | 35.0% | |
AAATCCGAGAAAATCGATAC+TGG | - | chr3.1:59279600-59279619 | None:intergenic | 35.0% | |
AACCGATTATTGAACCTTAC+CGG | - | chr3.1:59280751-59280770 | None:intergenic | 35.0% | |
AACTTCAAACAGATCTGTCA+TGG | + | chr3.1:59283072-59283091 | MS.gene039961:intron | 35.0% | |
AACTTTACCTCTCACAAAAG+TGG | + | chr3.1:59281430-59281449 | MS.gene039961:intron | 35.0% | |
AAGTTTGAATATAAAGCCGG+TGG | - | chr3.1:59280778-59280797 | None:intergenic | 35.0% | |
AATCCGAGAAAATCGATACT+GGG | - | chr3.1:59279599-59279618 | None:intergenic | 35.0% | |
AATCTAGACATGTGAAGAAG+GGG | - | chr3.1:59281939-59281958 | None:intergenic | 35.0% | |
ACAGTTACCAGTGTTATCAA+TGG | - | chr3.1:59279903-59279922 | None:intergenic | 35.0% | |
ACTTGCATCCCATGATAAAT+TGG | + | chr3.1:59283030-59283049 | MS.gene039961:intron | 35.0% | |
AGAACATTCACTGAGTAGAT+TGG | - | chr3.1:59282024-59282043 | None:intergenic | 35.0% | |
AGAATAGAACTCTGGTTAAG+AGG | - | chr3.1:59283403-59283422 | None:intergenic | 35.0% | |
AGAGGAACAGGATAAAAACA+TGG | + | chr3.1:59282826-59282845 | MS.gene039961:intron | 35.0% | |
AGATGAGGAATATTCATCCT+CGG | - | chr3.1:59282424-59282443 | None:intergenic | 35.0% | |
ATAACTTCCACAATCCACAT+TGG | + | chr3.1:59280370-59280389 | MS.gene039961:intron | 35.0% | |
ATGAGCAACCTAATTGTCAA+TGG | + | chr3.1:59282974-59282993 | MS.gene039961:intron | 35.0% | |
ATGCAGAACACAAATGACAT+CGG | - | chr3.1:59280645-59280664 | None:intergenic | 35.0% | |
ATGTAGAGAACTCAGAAGAT+TGG | + | chr3.1:59283257-59283276 | MS.gene039961:intron | 35.0% | |
ATTAAAACCACGGGTTCTAT+TGG | - | chr3.1:59281502-59281521 | None:intergenic | 35.0% | |
ATTCTCCTTCAAATTGGACT+TGG | + | chr3.1:59282929-59282948 | MS.gene039961:intron | 35.0% | |
ATTGGAGCTAATCACATCTA+TGG | + | chr3.1:59281302-59281321 | MS.gene039961:intron | 35.0% | |
ATTGTGTTAAGTAACTGAGG+TGG | + | chr3.1:59281609-59281628 | MS.gene039961:intron | 35.0% | |
ATTTGAAAACTCGGATGTTC+GGG | + | chr3.1:59279616-59279635 | MS.gene039961:intron | 35.0% | |
ATTTGATTGTTATGCCTGCA+AGG | - | chr3.1:59281380-59281399 | None:intergenic | 35.0% | |
CAATGAACATCTCTTTGAAC+TGG | + | chr3.1:59281810-59281829 | MS.gene039961:intron | 35.0% | |
CAATGATGATTGGGAGATTA+AGG | - | chr3.1:59280417-59280436 | None:intergenic | 35.0% | |
CAATTGCACTAACCATTTCA+AGG | + | chr3.1:59283168-59283187 | MS.gene039961:intron | 35.0% | |
CATGGCCAATTTATGAAAGA+CGG | + | chr3.1:59279829-59279848 | MS.gene039961:intron | 35.0% | |
CCATGATAAATTGGTATCAG+GGG | + | chr3.1:59283039-59283058 | MS.gene039961:intron | 35.0% | |
CCCATGATAAATTGGTATCA+GGG | + | chr3.1:59283038-59283057 | MS.gene039961:intron | 35.0% | |
CCCTGATACCAATTTATCAT+GGG | - | chr3.1:59283041-59283060 | None:intergenic | 35.0% | |
CGGTGACAAAAAATGATTTC+AGG | + | chr3.1:59279028-59279047 | MS.gene039961:intron | 35.0% | |
CTAAACAACTCAAGACTTCA+TGG | - | chr3.1:59279557-59279576 | None:intergenic | 35.0% | |
CTCTCTTGTGTATTCTTCAA+TGG | + | chr3.1:59278543-59278562 | MS.gene039961:CDS | 35.0% | |
CTGTAACATTTAACGTTGCT+GGG | + | chr3.1:59284394-59284413 | MS.gene039961:CDS | 35.0% | |
CTTAACCAGAGTTCTATTCT+GGG | + | chr3.1:59283403-59283422 | MS.gene039961:intron | 35.0% | |
CTTCTCTTATACCCATTGTT+GGG | + | chr3.1:59280886-59280905 | MS.gene039961:CDS | 35.0% | |
GAATACTTCCTAGTCTACAT+TGG | - | chr3.1:59281279-59281298 | None:intergenic | 35.0% | |
GAATAGAACTCTGGTTAAGA+GGG | - | chr3.1:59283402-59283421 | None:intergenic | 35.0% | |
GAATGGAATAAGAAGAAACC+TGG | - | chr3.1:59278613-59278632 | None:intergenic | 35.0% | |
GATTTGAAAACTCGGATGTT+CGG | + | chr3.1:59279615-59279634 | MS.gene039961:intron | 35.0% | |
GCAGAAAAAGAGGAATAGAT+GGG | - | chr3.1:59282192-59282211 | None:intergenic | 35.0% | |
GCAGAAAATGATCCAGTAAT+GGG | + | chr3.1:59281528-59281547 | MS.gene039961:intron | 35.0% | |
GGAGTGGATCACATAAAAAA+TGG | - | chr3.1:59284367-59284386 | None:intergenic | 35.0% | |
GGTGGTAATATATGATAGAC+TGG | - | chr3.1:59283829-59283848 | None:intergenic | 35.0% | |
GTAACAACTGTTTCAGCAAA+AGG | + | chr3.1:59282906-59282925 | MS.gene039961:intron | 35.0% | |
GTTAAATGTTACAGCAGTAG+TGG | - | chr3.1:59284388-59284407 | None:intergenic | 35.0% | |
TAATAATCTTCAGGGTTTCC+AGG | + | chr3.1:59283114-59283133 | MS.gene039961:intron | 35.0% | |
TCACAATGACAAGGAAAGAA+CGG | - | chr3.1:59281765-59281784 | None:intergenic | 35.0% | |
TCAGTAACAGAACACAACTT+TGG | - | chr3.1:59279501-59279520 | None:intergenic | 35.0% | |
TCCAACATCATCAAGAAACT+GGG | - | chr3.1:59282671-59282690 | None:intergenic | 35.0% | |
TCCCATGATAAATTGGTATC+AGG | + | chr3.1:59283037-59283056 | MS.gene039961:intron | 35.0% | |
TCTCAATGCCATTGACAATT+AGG | - | chr3.1:59282985-59283004 | None:intergenic | 35.0% | |
TCTTAACCAGAGTTCTATTC+TGG | + | chr3.1:59283402-59283421 | MS.gene039961:intron | 35.0% | |
TCTTGTGTATTCTTCAATGG+TGG | + | chr3.1:59278546-59278565 | MS.gene039961:CDS | 35.0% | |
TGCAGAAAATGATCCAGTAA+TGG | + | chr3.1:59281527-59281546 | MS.gene039961:intron | 35.0% | |
TGCATGGATACAAATTTGAC+AGG | + | chr3.1:59281021-59281040 | MS.gene039961:CDS | 35.0% | |
TGTAGAGAACTCAGAAGATT+GGG | + | chr3.1:59283258-59283277 | MS.gene039961:intron | 35.0% | |
TGTGTACTGCAGAAAAATCT+TGG | - | chr3.1:59284144-59284163 | None:intergenic | 35.0% | |
TGTTGTCCATTATAAGGAGT+TGG | - | chr3.1:59281204-59281223 | None:intergenic | 35.0% | |
TTAAAACCACGGGTTCTATT+GGG | - | chr3.1:59281501-59281520 | None:intergenic | 35.0% | |
TTAGTCACAAAGTGCATTGT+GGG | + | chr3.1:59284551-59284570 | MS.gene039961:intron | 35.0% | |
TTCTCCTTCAAATTGGACTT+GGG | + | chr3.1:59282930-59282949 | MS.gene039961:intron | 35.0% | |
TTCTCTTATACCCATTGTTG+GGG | + | chr3.1:59280887-59280906 | MS.gene039961:CDS | 35.0% | |
TTCTGCATTAACATAGTGCT+GGG | + | chr3.1:59280657-59280676 | MS.gene039961:CDS | 35.0% | |
TTCTTTCCTTGTCATTGTGA+AGG | + | chr3.1:59281765-59281784 | MS.gene039961:intron | 35.0% | |
TTGAGTTTGAAGGTAGAGTT+TGG | - | chr3.1:59282873-59282892 | None:intergenic | 35.0% | |
TTGGAGCTAATCACATCTAT+GGG | + | chr3.1:59281303-59281322 | MS.gene039961:intron | 35.0% | |
TTTAGTCACAAAGTGCATTG+TGG | + | chr3.1:59284550-59284569 | MS.gene039961:intron | 35.0% | |
! | ACAGATCTGTTTGAAGTTAC+CGG | - | chr3.1:59283070-59283089 | None:intergenic | 35.0% |
! | AGTAGATTGGTGTTCTTTGT+TGG | - | chr3.1:59282011-59282030 | None:intergenic | 35.0% |
! | ATTTCAATTTGATGGCACAC+CGG | - | chr3.1:59281872-59281891 | None:intergenic | 35.0% |
! | CCAACTTGTTTAGAAAATGC+AGG | + | chr3.1:59283707-59283726 | MS.gene039961:intron | 35.0% |
! | CCACTTGTTAACGATGATAA+CGG | - | chr3.1:59278585-59278604 | None:intergenic | 35.0% |
! | CCTGCATTTTCTAAACAAGT+TGG | - | chr3.1:59283710-59283729 | None:intergenic | 35.0% |
! | GCATGTCTAAGATAAATGCA+AGG | - | chr3.1:59284073-59284092 | None:intergenic | 35.0% |
! | GTAGATTGGTGTTCTTTGTT+GGG | - | chr3.1:59282010-59282029 | None:intergenic | 35.0% |
! | GTGGATTGTGGAAGTTATAA+AGG | - | chr3.1:59280368-59280387 | None:intergenic | 35.0% |
! | GTTCGGGTTTAAATCAATCT+AGG | + | chr3.1:59279632-59279651 | MS.gene039961:intron | 35.0% |
! | TGATTTGCGATAACATTAGC+TGG | - | chr3.1:59281354-59281373 | None:intergenic | 35.0% |
! | TTTGATGGTCAAAAAAGGTC+TGG | + | chr3.1:59280107-59280126 | MS.gene039961:intron | 35.0% |
!! | AAACAAGTTGGTCCATTCAA+TGG | - | chr3.1:59283698-59283717 | None:intergenic | 35.0% |
!! | AACAAGTTGGTCCATTCAAT+GGG | - | chr3.1:59283697-59283716 | None:intergenic | 35.0% |
!! | AACTCCTTATAATGGACAAC+AGG | + | chr3.1:59281203-59281222 | MS.gene039961:intron | 35.0% |
!! | GGAGGGAAGTTGATATAAAA+TGG | - | chr3.1:59281258-59281277 | None:intergenic | 35.0% |
!! | TAATTTTGAAGGAGACCTTG+AGG | - | chr3.1:59282264-59282283 | None:intergenic | 35.0% |
!!! | AAACCCAGTATCGATTTTCT+CGG | + | chr3.1:59279593-59279612 | MS.gene039961:intron | 35.0% |
!!! | AGGTAGTTTTTTAGATCAGC+TGG | + | chr3.1:59281709-59281728 | MS.gene039961:intron | 35.0% |
!!! | GGTAGTTTTTTAGATCAGCT+GGG | + | chr3.1:59281710-59281729 | MS.gene039961:intron | 35.0% |
!!! | TGTGGAGGAAATATTTTGAC+TGG | + | chr3.1:59280853-59280872 | MS.gene039961:CDS | 35.0% |
AAAAGGTCTGGTGGTTTCTT+AGG | + | chr3.1:59280119-59280138 | MS.gene039961:intron | 40.0% | |
AAAGAGCCTTCACAATGACA+AGG | - | chr3.1:59281774-59281793 | None:intergenic | 40.0% | |
AAATCAGATCTACATCCGGA+AGG | + | chr3.1:59280161-59280180 | MS.gene039961:intron | 40.0% | |
AAGAGGGGGATAATAGAGAT+AGG | - | chr3.1:59282502-59282521 | None:intergenic | 40.0% | |
AAGGCAATGGAGTTCTTGAA+TGG | + | chr3.1:59284262-59284281 | MS.gene039961:CDS | 40.0% | |
AATCAGATCTACATCCGGAA+GGG | + | chr3.1:59280162-59280181 | MS.gene039961:intron | 40.0% | |
AATGGGTGTGGTCCAATTAT+TGG | + | chr3.1:59281545-59281564 | MS.gene039961:intron | 40.0% | |
AATTCAAGATTCACTCTCCG+TGG | + | chr3.1:59282610-59282629 | MS.gene039961:intron | 40.0% | |
ACACTGTTGCACTTTACCAT+TGG | - | chr3.1:59283850-59283869 | None:intergenic | 40.0% | |
ACTTCCTAGTCTACATTGGA+GGG | - | chr3.1:59281275-59281294 | None:intergenic | 40.0% | |
AGAAACCCAGAATAGAACTC+TGG | - | chr3.1:59283411-59283430 | None:intergenic | 40.0% | |
AGATCATTTGACACACAGGT+AGG | - | chr3.1:59283949-59283968 | None:intergenic | 40.0% | |
AGATGATTCACTTGGGAAAG+GGG | + | chr3.1:59281653-59281672 | MS.gene039961:intron | 40.0% | |
AGTGGACACATGATACTGAT+AGG | - | chr3.1:59280524-59280543 | None:intergenic | 40.0% | |
ATGCAAAGATGAAATCAGCC+TGG | - | chr3.1:59283616-59283635 | None:intergenic | 40.0% | |
ATGGGTGTGGTCCAATTATT+GGG | + | chr3.1:59281546-59281565 | MS.gene039961:intron | 40.0% | |
CACCGGTAAGGTTCAATAAT+CGG | + | chr3.1:59280746-59280765 | MS.gene039961:intron | 40.0% | |
CACTAACCATTTCAAGGGTT+GGG | + | chr3.1:59283174-59283193 | MS.gene039961:intron | 40.0% | |
CATGCAAAAGAGATTCTGCA+AGG | - | chr3.1:59281007-59281026 | None:intergenic | 40.0% | |
CCAACATCATCAAGAAACTG+GGG | - | chr3.1:59282670-59282689 | None:intergenic | 40.0% | |
CCAGAAATCAGATCTACATC+CGG | + | chr3.1:59280157-59280176 | MS.gene039961:intron | 40.0% | |
CCCCTGATACCAATTTATCA+TGG | - | chr3.1:59283042-59283061 | None:intergenic | 40.0% | |
CCGTTATCATCGTTAACAAG+TGG | + | chr3.1:59278582-59278601 | MS.gene039961:CDS | 40.0% | |
CGACACCGTCTTTCATAAAT+TGG | - | chr3.1:59279837-59279856 | None:intergenic | 40.0% | |
CGCAGAAAAAGAGGAATAGA+TGG | - | chr3.1:59282193-59282212 | None:intergenic | 40.0% | |
CGGATGTAGATCTGATTTCT+GGG | - | chr3.1:59280159-59280178 | None:intergenic | 40.0% | |
CGTCTTTCATAAATTGGCCA+TGG | - | chr3.1:59279831-59279850 | None:intergenic | 40.0% | |
CTCCAACATCATCAAGAAAC+TGG | - | chr3.1:59282672-59282691 | None:intergenic | 40.0% | |
CTTTCATAAATTGGCCATGG+CGG | - | chr3.1:59279828-59279847 | None:intergenic | 40.0% | |
GAGATGATTCACTTGGGAAA+GGG | + | chr3.1:59281652-59281671 | MS.gene039961:intron | 40.0% | |
GCTGTAACATTTAACGTTGC+TGG | + | chr3.1:59284393-59284412 | MS.gene039961:CDS | 40.0% | |
GCTTCTCTTATACCCATTGT+TGG | + | chr3.1:59280885-59280904 | MS.gene039961:CDS | 40.0% | |
GGAACAGGATAAAAACATGG+TGG | + | chr3.1:59282829-59282848 | MS.gene039961:intron | 40.0% | |
GGGATAATAGAGATAGGAGT+AGG | - | chr3.1:59282496-59282515 | None:intergenic | 40.0% | |
GTAACCAATTAGATGTTGCG+AGG | - | chr3.1:59282065-59282084 | None:intergenic | 40.0% | |
GTAGAGAACTCAGAAGATTG+GGG | + | chr3.1:59283259-59283278 | MS.gene039961:intron | 40.0% | |
GTAGGTCTACCTATAGGATA+GGG | - | chr3.1:59283931-59283950 | None:intergenic | 40.0% | |
GTATGTGGATAGTCTGTACA+GGG | - | chr3.1:59281142-59281161 | None:intergenic | 40.0% | |
GTCAACAATAAAAAGGCCCA+CGG | + | chr3.1:59281568-59281587 | MS.gene039961:intron | 40.0% | |
GTGGACACATGATACTGATA+GGG | - | chr3.1:59280523-59280542 | None:intergenic | 40.0% | |
GTTACCAGTGTTATCAATGG+CGG | - | chr3.1:59279900-59279919 | None:intergenic | 40.0% | |
GTTCTGCATTAACATAGTGC+TGG | + | chr3.1:59280656-59280675 | MS.gene039961:CDS | 40.0% | |
TACTCATCCATATCCTTGGT+CGG | + | chr3.1:59284290-59284309 | MS.gene039961:CDS | 40.0% | |
TACTCCCAAGTCCAATTTGA+AGG | - | chr3.1:59282937-59282956 | None:intergenic | 40.0% | |
TACTTCCTAGTCTACATTGG+AGG | - | chr3.1:59281276-59281295 | None:intergenic | 40.0% | |
TAGAGTCTGACAAAACTGAG+AGG | + | chr3.1:59282808-59282827 | MS.gene039961:intron | 40.0% | |
TATGTGGATAGTCTGTACAG+GGG | - | chr3.1:59281141-59281160 | None:intergenic | 40.0% | |
TCAAATTGGACTTGGGAGTA+GGG | + | chr3.1:59282937-59282956 | MS.gene039961:intron | 40.0% | |
TCATTGAACTGGAGCTGTTA+TGG | + | chr3.1:59279473-59279492 | MS.gene039961:intron | 40.0% | |
TCCATTGCCTTCAAGTAACA+TGG | - | chr3.1:59284253-59284272 | None:intergenic | 40.0% | |
TCGGCAACATCAAGATAGAA+AGG | - | chr3.1:59283656-59283675 | None:intergenic | 40.0% | |
TCTATCTTGATGTTGCCGAT+GGG | + | chr3.1:59283657-59283676 | MS.gene039961:intron | 40.0% | |
TCTCTTATACCCATTGTTGG+GGG | + | chr3.1:59280888-59280907 | MS.gene039961:CDS | 40.0% | |
TCTGCATTAACATAGTGCTG+GGG | + | chr3.1:59280658-59280677 | MS.gene039961:CDS | 40.0% | |
TGGACACATGATACTGATAG+GGG | - | chr3.1:59280522-59280541 | None:intergenic | 40.0% | |
TGGACTAACAACATCAATGC+AGG | - | chr3.1:59281238-59281257 | None:intergenic | 40.0% | |
TTCAAACAGATCTGTCATGG+CGG | + | chr3.1:59283075-59283094 | MS.gene039961:intron | 40.0% | |
TTCAAATTGGACTTGGGAGT+AGG | + | chr3.1:59282936-59282955 | MS.gene039961:intron | 40.0% | |
TTCTATCTTGATGTTGCCGA+TGG | + | chr3.1:59283656-59283675 | MS.gene039961:intron | 40.0% | |
TTCTTTGTATCTTTCGGCTG+TGG | - | chr3.1:59282450-59282469 | None:intergenic | 40.0% | |
! | ATCTGATTTCTGGGAACCAA+GGG | - | chr3.1:59280150-59280169 | None:intergenic | 40.0% |
! | ATTCTCTGTCCTAGTTTGTG+AGG | + | chr3.1:59283004-59283023 | MS.gene039961:intron | 40.0% |
! | ATTCTTTTCCAGCGATCTTC+AGG | - | chr3.1:59280618-59280637 | None:intergenic | 40.0% |
! | CAATTAGGTTGCTCATTAGC+TGG | - | chr3.1:59282970-59282989 | None:intergenic | 40.0% |
! | CATAAAAGGCGCAGAAAAAG+AGG | - | chr3.1:59282202-59282221 | None:intergenic | 40.0% |
! | CTCTAACTTGTCTGGAATTC+TGG | + | chr3.1:59281110-59281129 | MS.gene039961:intron | 40.0% |
! | CTCTTTTTCTGCGCCTTTTA+TGG | + | chr3.1:59282200-59282219 | MS.gene039961:intron | 40.0% |
! | CTTGCAGAATCTCTTTTGCA+TGG | + | chr3.1:59281005-59281024 | MS.gene039961:CDS | 40.0% |
! | CTTGTGGGTTGTACATTCTA+TGG | + | chr3.1:59284783-59284802 | MS.gene039961:CDS | 40.0% |
! | TGCATTGTGGGTTGTGTAAA+TGG | + | chr3.1:59284563-59284582 | MS.gene039961:intron | 40.0% |
! | TTCTTTTCCAGCGATCTTCA+GGG | - | chr3.1:59280617-59280636 | None:intergenic | 40.0% |
!! | AAATGATCCAGTAATGGGTG+TGG | + | chr3.1:59281533-59281552 | MS.gene039961:intron | 40.0% |
!! | ACATTTCGAGAAGCACTGAA+AGG | - | chr3.1:59280031-59280050 | None:intergenic | 40.0% |
!! | AGGAGGCTTGGTTATGATTT+TGG | - | chr3.1:59279446-59279465 | None:intergenic | 40.0% |
!! | ATGTGGCGAGTTTGTTAAGA+GGG | - | chr3.1:59282518-59282537 | None:intergenic | 40.0% |
!! | CAGTTTCTTGATGATGTTGG+AGG | + | chr3.1:59282670-59282689 | MS.gene039961:intron | 40.0% |
!! | CTTGCACAGTTGTTTTGCAA+TGG | + | chr3.1:59280826-59280845 | MS.gene039961:intron | 40.0% |
!! | GGAGGCTTGGTTATGATTTT+GGG | - | chr3.1:59279445-59279464 | None:intergenic | 40.0% |
!! | GTTAGAAGGTAGTTCTGATG+TGG | - | chr3.1:59282535-59282554 | None:intergenic | 40.0% |
!! | TAGAGTTAGGTTGGGAGTTT+CGG | - | chr3.1:59282585-59282604 | None:intergenic | 40.0% |
!! | TTGTTTTGCAATGGCTAGTG+TGG | + | chr3.1:59280835-59280854 | MS.gene039961:CDS | 40.0% |
!!! | GGATTTTTGGTTTTCCACCA+TGG | + | chr3.1:59279866-59279885 | MS.gene039961:intron | 40.0% |
!!! | TATTTTTAGTTCTGGGGTGC+TGG | + | chr3.1:59284323-59284342 | MS.gene039961:CDS | 40.0% |
AACTCAGAAGATTGGGGACT+GGG | + | chr3.1:59283265-59283284 | MS.gene039961:intron | 45.0% | |
AAGTAACTGAGGTGGCAGTT+GGG | + | chr3.1:59281617-59281636 | MS.gene039961:intron | 45.0% | |
AATTAGATGTTGCGAGGCAG+GGG | - | chr3.1:59282059-59282078 | None:intergenic | 45.0% | |
AATTGGACCACACCCATTAC+TGG | - | chr3.1:59281543-59281562 | None:intergenic | 45.0% | |
ACACAGGTAGGTCTACCTAT+AGG | - | chr3.1:59283937-59283956 | None:intergenic | 45.0% | |
ACATCATCAAGAAACTGGGG+TGG | - | chr3.1:59282667-59282686 | None:intergenic | 45.0% | |
ACATGTGAAGAAGGGGCAAA+GGG | - | chr3.1:59281932-59281951 | None:intergenic | 45.0% | |
ACCAAGATCATGGTCGCATA+AGG | - | chr3.1:59284222-59284241 | None:intergenic | 45.0% | |
ACCCAACTAGTGACTCAAAG+TGG | - | chr3.1:59278911-59278930 | None:intergenic | 45.0% | |
ACCTTATGCGACCATGATCT+TGG | + | chr3.1:59284218-59284237 | MS.gene039961:CDS | 45.0% | |
ACTTCCCTCCAATGTAGACT+AGG | + | chr3.1:59281268-59281287 | MS.gene039961:intron | 45.0% | |
AGAAGAATCCCCCCAACAAT+GGG | - | chr3.1:59280900-59280919 | None:intergenic | 45.0% | |
AGTTCAATGAGCAAGCTAGG+AGG | - | chr3.1:59279463-59279482 | None:intergenic | 45.0% | |
ATAATGATGAGAGCCGACCA+AGG | - | chr3.1:59284306-59284325 | None:intergenic | 45.0% | |
ATCAGATCTACATCCGGAAG+GGG | + | chr3.1:59280163-59280182 | MS.gene039961:intron | 45.0% | |
ATCGCAAATCAGTACCTTGC+AGG | + | chr3.1:59281363-59281382 | MS.gene039961:intron | 45.0% | |
ATGCTGCAGAAATGTGAGTG+GGG | - | chr3.1:59282561-59282580 | None:intergenic | 45.0% | |
CAATAAAAAGGCCCACGGTA+TGG | + | chr3.1:59281573-59281592 | MS.gene039961:intron | 45.0% | |
CAATGGCTGAGCAGATAAAG+TGG | - | chr3.1:59280542-59280561 | None:intergenic | 45.0% | |
CAATTAGATGTTGCGAGGCA+GGG | - | chr3.1:59282060-59282079 | None:intergenic | 45.0% | |
CACTGCCTTGAATCCTAAGA+GGG | + | chr3.1:59282712-59282731 | MS.gene039961:intron | 45.0% | |
CACTTTATCTGCTCAGCCAT+TGG | + | chr3.1:59280540-59280559 | MS.gene039961:CDS | 45.0% | |
CATCATCAAGAAACTGGGGT+GGG | - | chr3.1:59282666-59282685 | None:intergenic | 45.0% | |
CATGCTGCAGAAATGTGAGT+GGG | - | chr3.1:59282562-59282581 | None:intergenic | 45.0% | |
CCAAATCGACCCTATCCTAT+AGG | + | chr3.1:59283919-59283938 | MS.gene039961:intron | 45.0% | |
CCACCATCTCGATATCATGT+CGG | + | chr3.1:59282109-59282128 | MS.gene039961:intron | 45.0% | |
CCCTTGAAATGACGTCGAAA+CGG | - | chr3.1:59282748-59282767 | None:intergenic | 45.0% | |
CCGGATGTAGATCTGATTTC+TGG | - | chr3.1:59280160-59280179 | None:intergenic | 45.0% | |
CCGTTTCGACGTCATTTCAA+GGG | + | chr3.1:59282745-59282764 | MS.gene039961:intron | 45.0% | |
CCTATAGGATAGGGTCGATT+TGG | - | chr3.1:59283922-59283941 | None:intergenic | 45.0% | |
CCTTCTTTGAATGGTCCTCA+AGG | + | chr3.1:59282246-59282265 | MS.gene039961:intron | 45.0% | |
CCTTGAGGACCATTCAAAGA+AGG | - | chr3.1:59282249-59282268 | None:intergenic | 45.0% | |
CGACATGATATCGAGATGGT+GGG | - | chr3.1:59282111-59282130 | None:intergenic | 45.0% | |
CGATTATTGAACCTTACCGG+TGG | - | chr3.1:59280748-59280767 | None:intergenic | 45.0% | |
CGTTAACAAGTGGATCTTCC+AGG | + | chr3.1:59278592-59278611 | MS.gene039961:CDS | 45.0% | |
CTCATCCCTCTTAGGATTCA+AGG | - | chr3.1:59282720-59282739 | None:intergenic | 45.0% | |
CTCTTATACCCATTGTTGGG+GGG | + | chr3.1:59280889-59280908 | MS.gene039961:CDS | 45.0% | |
CTGACAAAACTGAGAGGAAC+AGG | + | chr3.1:59282814-59282833 | MS.gene039961:intron | 45.0% | |
CTGTTGCACTTTACCATTGG+TGG | - | chr3.1:59283847-59283866 | None:intergenic | 45.0% | |
CTTGAATCCTAAGAGGGATG+AGG | + | chr3.1:59282718-59282737 | MS.gene039961:intron | 45.0% | |
GAGATCTGATTACGCTCCAT+TGG | - | chr3.1:59278526-59278545 | None:intergenic | 45.0% | |
GAGGAATATTCATCCTCGGA+CGG | - | chr3.1:59282420-59282439 | None:intergenic | 45.0% | |
GATGGTCAAAAAAGGTCTGG+TGG | + | chr3.1:59280110-59280129 | MS.gene039961:intron | 45.0% | |
GCAAGTCATCCTCACAAACT+AGG | - | chr3.1:59283016-59283035 | None:intergenic | 45.0% | |
GCACTAACCATTTCAAGGGT+TGG | + | chr3.1:59283173-59283192 | MS.gene039961:intron | 45.0% | |
GGAGATGATTCACTTGGGAA+AGG | + | chr3.1:59281651-59281670 | MS.gene039961:intron | 45.0% | |
GGTAGGTCTACCTATAGGAT+AGG | - | chr3.1:59283932-59283951 | None:intergenic | 45.0% | |
GGTATGTGGATAGTCTGTAC+AGG | - | chr3.1:59281143-59281162 | None:intergenic | 45.0% | |
GTAGTGATTGAAGGGAAGGA+TGG | - | chr3.1:59281985-59282004 | None:intergenic | 45.0% | |
GTGTCGTCAAATATCGTCCA+TGG | + | chr3.1:59279775-59279794 | MS.gene039961:intron | 45.0% | |
GTTGGGAGGTAGTGATTGAA+GGG | - | chr3.1:59281993-59282012 | None:intergenic | 45.0% | |
TAACGTTGCTGGGAACCTTA+AGG | + | chr3.1:59284404-59284423 | MS.gene039961:CDS | 45.0% | |
TAAGTAACTGAGGTGGCAGT+TGG | + | chr3.1:59281616-59281635 | MS.gene039961:intron | 45.0% | |
TACTCTCCATACCGTCAAAG+TGG | + | chr3.1:59282082-59282101 | MS.gene039961:intron | 45.0% | |
TATCAATGCCTTGCCCTAGA+CGG | - | chr3.1:59281838-59281857 | None:intergenic | 45.0% | |
TCAACACCCAACCCTTGAAA+TGG | - | chr3.1:59283183-59283202 | None:intergenic | 45.0% | |
TCAGGGTCAACAGTTATCAG+TGG | - | chr3.1:59280600-59280619 | None:intergenic | 45.0% | |
TCCAGTTCAATGAGCAAGCT+AGG | - | chr3.1:59279466-59279485 | None:intergenic | 45.0% | |
TCGTCAAATATCGTCCATGG+CGG | + | chr3.1:59279778-59279797 | MS.gene039961:intron | 45.0% | |
TCTACTGCGGGAATGAAGTA+GGG | - | chr3.1:59282780-59282799 | None:intergenic | 45.0% | |
TCTTTAGGCGTGATGAGAGA+CGG | - | chr3.1:59283232-59283251 | None:intergenic | 45.0% | |
TGAGTCACTAGTTGGGTAGA+GGG | + | chr3.1:59278914-59278933 | MS.gene039961:intron | 45.0% | |
TGCCTTCAAGTAACATGGCA+GGG | - | chr3.1:59284248-59284267 | None:intergenic | 45.0% | |
TGGAGGGAGATGATTCACTT+GGG | + | chr3.1:59281646-59281665 | MS.gene039961:intron | 45.0% | |
TGGGAGATTAAGGTGACTTG+AGG | - | chr3.1:59280407-59280426 | None:intergenic | 45.0% | |
TGTACAACCCACAAGAGTGA+TGG | - | chr3.1:59284778-59284797 | None:intergenic | 45.0% | |
TGTAGCCAAACAGCCAAGTA+AGG | - | chr3.1:59280970-59280989 | None:intergenic | 45.0% | |
TGTCCGACATGATATCGAGA+TGG | - | chr3.1:59282115-59282134 | None:intergenic | 45.0% | |
TGTTGGGAGGTAGTGATTGA+AGG | - | chr3.1:59281994-59282013 | None:intergenic | 45.0% | |
TTGAGTCACTAGTTGGGTAG+AGG | + | chr3.1:59278913-59278932 | MS.gene039961:intron | 45.0% | |
TTGCCTTCAAGTAACATGGC+AGG | - | chr3.1:59284249-59284268 | None:intergenic | 45.0% | |
TTGGAGGGAGATGATTCACT+TGG | + | chr3.1:59281645-59281664 | MS.gene039961:intron | 45.0% | |
! | AATTTGATGGCACACCGGTA+AGG | - | chr3.1:59281867-59281886 | None:intergenic | 45.0% |
! | ATGTTACAGCAGTAGTGGAG+TGG | - | chr3.1:59284383-59284402 | None:intergenic | 45.0% |
! | ATTTCAAGGGTTGGGTGTTG+AGG | + | chr3.1:59283182-59283201 | MS.gene039961:intron | 45.0% |
! | CAATAATCGGTTTCTGCCAC+CGG | + | chr3.1:59280759-59280778 | MS.gene039961:intron | 45.0% |
! | CACAAAAGTGGCTTGCGAAT+GGG | + | chr3.1:59281442-59281461 | MS.gene039961:intron | 45.0% |
! | CAGTTGCTGTCCTTGTTTCT+TGG | + | chr3.1:59284706-59284725 | MS.gene039961:CDS | 45.0% |
! | CTATCCGCCATTGATAACAC+TGG | + | chr3.1:59279893-59279912 | MS.gene039961:intron | 45.0% |
! | CTGGTAACTGTTCTAGACTG+CGG | + | chr3.1:59279912-59279931 | MS.gene039961:intron | 45.0% |
! | GATCTGATTTCTGGGAACCA+AGG | - | chr3.1:59280151-59280170 | None:intergenic | 45.0% |
! | GATTGGTGTTCTTTGTTGGG+AGG | - | chr3.1:59282007-59282026 | None:intergenic | 45.0% |
! | GCCACTTTGAGTCACTAGTT+GGG | + | chr3.1:59278907-59278926 | MS.gene039961:intron | 45.0% |
! | GCCATGTTACTTGAAGGCAA+TGG | + | chr3.1:59284249-59284268 | MS.gene039961:CDS | 45.0% |
! | TCACAAAAGTGGCTTGCGAA+TGG | + | chr3.1:59281441-59281460 | MS.gene039961:intron | 45.0% |
! | TTTTGCAATGGCTAGTGTGG+AGG | + | chr3.1:59280838-59280857 | MS.gene039961:CDS | 45.0% |
!! | AGCTTTGCTCTGGGGATTAT+AGG | - | chr3.1:59282397-59282416 | None:intergenic | 45.0% |
!! | AGGGTCGATTTGGAGAAAAG+AGG | - | chr3.1:59283912-59283931 | None:intergenic | 45.0% |
!! | ATATCGTCCATGGCGGATTA+CGG | + | chr3.1:59279785-59279804 | MS.gene039961:intron | 45.0% |
!! | CATGTTGGTTCCACTTCGAA+GGG | - | chr3.1:59279332-59279351 | None:intergenic | 45.0% |
!! | CCCCAGTTTCTTGATGATGT+TGG | + | chr3.1:59282667-59282686 | MS.gene039961:intron | 45.0% |
!! | GATGTGGCGAGTTTGTTAAG+AGG | - | chr3.1:59282519-59282538 | None:intergenic | 45.0% |
!! | GGGAAAGGGGTATTTAAGAC+AGG | + | chr3.1:59281666-59281685 | MS.gene039961:intron | 45.0% |
!! | GTGTTATCAATGGCGGATAG+TGG | - | chr3.1:59279893-59279912 | None:intergenic | 45.0% |
!! | GTTGAGGTAGTATAGTGGGT+TGG | + | chr3.1:59284602-59284621 | MS.gene039961:intron | 45.0% |
!! | TCCTAGCTTGCTCATTGAAC+TGG | + | chr3.1:59279462-59279481 | MS.gene039961:intron | 45.0% |
!! | TGCCACTTTGAGTCACTAGT+TGG | + | chr3.1:59278906-59278925 | MS.gene039961:intron | 45.0% |
!! | TGTGGCGAGTTTGTTAAGAG+GGG | - | chr3.1:59282517-59282536 | None:intergenic | 45.0% |
!! | TTAATAATGGACCACTGGCG+AGG | + | chr3.1:59283357-59283376 | MS.gene039961:intron | 45.0% |
!!! | AAAAGTTTTTTTTTTTTTTT+TGG | + | chr3.1:59279081-59279100 | MS.gene039961:intron | 5.0% |
!!! | AAAGTTTTTTTTTTTTTTTT+GGG | + | chr3.1:59279082-59279101 | MS.gene039961:intron | 5.0% |
!!! | TATATTTGTTAATTTTATAA+TGG | + | chr3.1:59283318-59283337 | MS.gene039961:intron | 5.0% |
!!! | TTATTTTCAATAAATAAATA+GGG | - | chr3.1:59282354-59282373 | None:intergenic | 5.0% |
!!! | TTTATTTTCAATAAATAAAT+AGG | - | chr3.1:59282355-59282374 | None:intergenic | 5.0% |
AAAAAGGCCCACGGTATGGA+AGG | + | chr3.1:59281577-59281596 | MS.gene039961:intron | 50.0% | |
AAACAGATCTGTCATGGCGG+TGG | + | chr3.1:59283078-59283097 | MS.gene039961:intron | 50.0% | |
AATGAGCAAGCTAGGAGGCT+TGG | - | chr3.1:59279458-59279477 | None:intergenic | 50.0% | |
AGAGGGTGAGTTACCATCCT+AGG | - | chr3.1:59283385-59283404 | None:intergenic | 50.0% | |
AGATAGGAGTAGGACTCGAG+TGG | - | chr3.1:59282486-59282505 | None:intergenic | 50.0% | |
AGTCACTAGTTGGGTAGAGG+GGG | + | chr3.1:59278916-59278935 | MS.gene039961:intron | 50.0% | |
ATAGGAGTAGGACTCGAGTG+GGG | - | chr3.1:59282484-59282503 | None:intergenic | 50.0% | |
ATGAGAGCCGACCAAGGATA+TGG | - | chr3.1:59284300-59284319 | None:intergenic | 50.0% | |
ATTGGACTTGGGAGTAGGGA+AGG | + | chr3.1:59282941-59282960 | MS.gene039961:intron | 50.0% | |
ATTGGTATCAGGGGCTTGAC+CGG | + | chr3.1:59283048-59283067 | MS.gene039961:intron | 50.0% | |
CACCAAGGCTGCTCCATAAA+AGG | - | chr3.1:59282216-59282235 | None:intergenic | 50.0% | |
CATAAATTGGCCATGGCGGT+AGG | - | chr3.1:59279824-59279843 | None:intergenic | 50.0% | |
CCAATTAGATGTTGCGAGGC+AGG | - | chr3.1:59282061-59282080 | None:intergenic | 50.0% | |
CCACTGCCTTGAATCCTAAG+AGG | + | chr3.1:59282711-59282730 | MS.gene039961:intron | 50.0% | |
CCGACATGATATCGAGATGG+TGG | - | chr3.1:59282112-59282131 | None:intergenic | 50.0% | |
CCTCTTAGGATTCAAGGCAG+TGG | - | chr3.1:59282714-59282733 | None:intergenic | 50.0% | |
CCTGCCTCGCAACATCTAAT+TGG | + | chr3.1:59282058-59282077 | MS.gene039961:intron | 50.0% | |
GAACTCAGAAGATTGGGGAC+TGG | + | chr3.1:59283264-59283283 | MS.gene039961:intron | 50.0% | |
GAAGGATGGTGAGGATGCAA+AGG | - | chr3.1:59281971-59281990 | None:intergenic | 50.0% | |
GAATAGATGGGACGAGTCTC+TGG | - | chr3.1:59282180-59282199 | None:intergenic | 50.0% | |
GACATGTGAAGAAGGGGCAA+AGG | - | chr3.1:59281933-59281952 | None:intergenic | 50.0% | |
GAGAAGAATCCCCCCAACAA+TGG | - | chr3.1:59280901-59280920 | None:intergenic | 50.0% | |
GAGTCACTAGTTGGGTAGAG+GGG | + | chr3.1:59278915-59278934 | MS.gene039961:intron | 50.0% | |
GATAGGAGTAGGACTCGAGT+GGG | - | chr3.1:59282485-59282504 | None:intergenic | 50.0% | |
GATTGAAGGGAAGGATGGTG+AGG | - | chr3.1:59281980-59281999 | None:intergenic | 50.0% | |
GCATGCTGCAGAAATGTGAG+TGG | - | chr3.1:59282563-59282582 | None:intergenic | 50.0% | |
GCCGTTTCGACGTCATTTCA+AGG | + | chr3.1:59282744-59282763 | MS.gene039961:intron | 50.0% | |
GGACCATTCAAAGAAGGACC+AGG | - | chr3.1:59282243-59282262 | None:intergenic | 50.0% | |
GGAGGTAGTGATTGAAGGGA+AGG | - | chr3.1:59281989-59282008 | None:intergenic | 50.0% | |
GGATGTGCCATCACTCTTGT+GGG | + | chr3.1:59284768-59284787 | MS.gene039961:CDS | 50.0% | |
GGTTTCTTAGGCTGTACCCT+TGG | + | chr3.1:59280131-59280150 | MS.gene039961:intron | 50.0% | |
TAGTGCAATTGCACCCTCAC+TGG | - | chr3.1:59283159-59283178 | None:intergenic | 50.0% | |
TCAATCTCGTCCCTTCGAAG+TGG | + | chr3.1:59279319-59279338 | MS.gene039961:intron | 50.0% | |
TCAGATCTACATCCGGAAGG+GGG | + | chr3.1:59280164-59280183 | MS.gene039961:intron | 50.0% | |
TCATTCACACCTGCAACCAC+CGG | + | chr3.1:59280729-59280748 | MS.gene039961:CDS | 50.0% | |
TCCTGGAACTGGTGGTTGTT+GGG | - | chr3.1:59284829-59284848 | None:intergenic | 50.0% | |
TGCTGCAGAAATGTGAGTGG+GGG | - | chr3.1:59282560-59282579 | None:intergenic | 50.0% | |
TGGATGTGCCATCACTCTTG+TGG | + | chr3.1:59284767-59284786 | MS.gene039961:CDS | 50.0% | |
TGTGAGTGGGGGAAGTTAGA+AGG | - | chr3.1:59282549-59282568 | None:intergenic | 50.0% | |
TTCAGGGTTTCCAGGTTCAG+CGG | + | chr3.1:59283122-59283141 | MS.gene039961:intron | 50.0% | |
TTCCTGGAACTGGTGGTTGT+TGG | - | chr3.1:59284830-59284849 | None:intergenic | 50.0% | |
TTTCGGCTGTGGCTAAGATG+AGG | - | chr3.1:59282439-59282458 | None:intergenic | 50.0% | |
! | CAGATTTTTGCCTACCGCCA+TGG | + | chr3.1:59279811-59279830 | MS.gene039961:intron | 50.0% |
! | CTCCCTGCCATGTTACTTGA+AGG | + | chr3.1:59284243-59284262 | MS.gene039961:CDS | 50.0% |
! | CTTTTATGGAGCAGCCTTGG+TGG | + | chr3.1:59282214-59282233 | MS.gene039961:intron | 50.0% |
! | GGATTTTGTGCGGCCTTACT+TGG | + | chr3.1:59280954-59280973 | MS.gene039961:CDS | 50.0% |
!! | ATGGTGGGATGCCACTTTGA+CGG | - | chr3.1:59282096-59282115 | None:intergenic | 50.0% |
!! | CTTTGAACTGGTGCCGTCTA+GGG | + | chr3.1:59281822-59281841 | MS.gene039961:intron | 50.0% |
!! | GCATGTTGGTTCCACTTCGA+AGG | - | chr3.1:59279333-59279352 | None:intergenic | 50.0% |
!! | GTGGCGAGTTTGTTAAGAGG+GGG | - | chr3.1:59282516-59282535 | None:intergenic | 50.0% |
!! | TCTTTGAACTGGTGCCGTCT+AGG | + | chr3.1:59281821-59281840 | MS.gene039961:intron | 50.0% |
!! | TGAAAGACGGTGTCGCCATA+TGG | + | chr3.1:59279842-59279861 | MS.gene039961:intron | 50.0% |
!!! | GTCGCCATATGGCGGATTTT+TGG | + | chr3.1:59279853-59279872 | MS.gene039961:intron | 50.0% |
!!! | TCGCAAGCCACTTTTGTGAG+AGG | - | chr3.1:59281440-59281459 | None:intergenic | 50.0% |
AAGGACAGCCTTCCATACCG+TGG | - | chr3.1:59281588-59281607 | None:intergenic | 55.0% | |
AATTGCACCCTCACTGGCAC+TGG | - | chr3.1:59283153-59283172 | None:intergenic | 55.0% | |
ACTAGTTGGGTAGAGGGGGA+GGG | + | chr3.1:59278920-59278939 | MS.gene039961:intron | 55.0% | |
AGAAGGCCCAATAGAACCCG+TGG | + | chr3.1:59281492-59281511 | MS.gene039961:intron | 55.0% | |
AGCGACTCCATCTTACTCCG+AGG | - | chr3.1:59284864-59284883 | None:intergenic | 55.0% | |
AGGACAGCCTTCCATACCGT+GGG | - | chr3.1:59281587-59281606 | None:intergenic | 55.0% | |
AGGTGGCAGTTGGGTAGCAT+TGG | + | chr3.1:59281626-59281645 | MS.gene039961:intron | 55.0% | |
CACCAGTTCCAGGAACTCCT+CGG | + | chr3.1:59284835-59284854 | MS.gene039961:CDS | 55.0% | |
CGACTCCATCTTACTCCGAG+GGG | - | chr3.1:59284862-59284881 | None:intergenic | 55.0% | |
CGGCATTCCTCATCCCTCTT+AGG | - | chr3.1:59282728-59282747 | None:intergenic | 55.0% | |
CGGCCTGGTCCTTCTTTGAA+TGG | + | chr3.1:59282237-59282256 | MS.gene039961:intron | 55.0% | |
CTGTTGACCCTGAAGATCGC+TGG | + | chr3.1:59280607-59280626 | MS.gene039961:CDS | 55.0% | |
GCGACTCCATCTTACTCCGA+GGG | - | chr3.1:59284863-59284882 | None:intergenic | 55.0% | |
GGACTCGAGTGGGGATTCAT+TGG | - | chr3.1:59282475-59282494 | None:intergenic | 55.0% | |
TCCCAACAACCACCAGTTCC+AGG | + | chr3.1:59284825-59284844 | MS.gene039961:CDS | 55.0% | |
TGAACCTTACCGGTGGTTGC+AGG | - | chr3.1:59280741-59280760 | None:intergenic | 55.0% | |
TGCGAGGCAGGGGAATAGAT+AGG | - | chr3.1:59282049-59282068 | None:intergenic | 55.0% | |
TGCGGCCTTACTTGGCTGTT+TGG | + | chr3.1:59280962-59280981 | MS.gene039961:CDS | 55.0% | |
TTATGGAGCAGCCTTGGTGG+CGG | + | chr3.1:59282217-59282236 | MS.gene039961:intron | 55.0% | |
! | CGCCTTTTATGGAGCAGCCT+TGG | + | chr3.1:59282211-59282230 | MS.gene039961:intron | 55.0% |
! | GGCAGTTGGGTAGCATTGGA+GGG | + | chr3.1:59281630-59281649 | MS.gene039961:intron | 55.0% |
! | TGGCAGTTGGGTAGCATTGG+AGG | + | chr3.1:59281629-59281648 | MS.gene039961:intron | 55.0% |
!! | AAGACGGTGTCGCCATATGG+CGG | + | chr3.1:59279845-59279864 | MS.gene039961:intron | 55.0% |
!! | CAATGGCGGATAGTGGACCA+TGG | - | chr3.1:59279886-59279905 | None:intergenic | 55.0% |
!! | GGGATGCCACTTTGACGGTA+TGG | - | chr3.1:59282091-59282110 | None:intergenic | 55.0% |
ATCTTACTCCGAGGGGTCCG+AGG | - | chr3.1:59284855-59284874 | None:intergenic | 60.0% | |
CACACCTGCAACCACCGGTA+AGG | + | chr3.1:59280734-59280753 | MS.gene039961:intron | 60.0% | |
CACTAGTTGGGTAGAGGGGG+AGG | + | chr3.1:59278919-59278938 | MS.gene039961:intron | 60.0% | |
CAGATCTGTCATGGCGGTGG+CGG | + | chr3.1:59283081-59283100 | MS.gene039961:intron | 60.0% | |
CGAGGAGTTCCTGGAACTGG+TGG | - | chr3.1:59284837-59284856 | None:intergenic | 60.0% | |
CTCGGACGGAGCTTTGCTCT+GGG | - | chr3.1:59282406-59282425 | None:intergenic | 60.0% | |
GGTGCTTCCAGTGCCAGTGA+GGG | + | chr3.1:59283143-59283162 | MS.gene039961:intron | 60.0% | |
GTCCGAGGAGTTCCTGGAAC+TGG | - | chr3.1:59284840-59284859 | None:intergenic | 60.0% | |
TCGGACCCCTCGGAGTAAGA+TGG | + | chr3.1:59284854-59284873 | MS.gene039961:CDS | 60.0% | |
TCGGACGGAGCTTTGCTCTG+GGG | - | chr3.1:59282405-59282424 | None:intergenic | 60.0% | |
TCTGCCACCGTAATCCGCCA+TGG | - | chr3.1:59279795-59279814 | None:intergenic | 60.0% | |
TGGGACGAGTCTCTGGACAG+TGG | - | chr3.1:59282173-59282192 | None:intergenic | 60.0% | |
!! | AACTGGTGCCGTCTAGGGCA+AGG | + | chr3.1:59281827-59281846 | MS.gene039961:intron | 60.0% |
!! | ACTGGAAGCACCGCTGAACC+TGG | - | chr3.1:59283135-59283154 | None:intergenic | 60.0% |
!! | GGCAGGGAGCACCAAGATCA+TGG | - | chr3.1:59284232-59284251 | None:intergenic | 60.0% |
!! | TCGTCCATGGCGGATTACGG+TGG | + | chr3.1:59279788-59279807 | MS.gene039961:intron | 60.0% |
!! | TGGCGGATAGTGGACCATGG+TGG | - | chr3.1:59279883-59279902 | None:intergenic | 60.0% |
CAGGAACTCCTCGGACCCCT+CGG | + | chr3.1:59284844-59284863 | MS.gene039961:CDS | 65.0% | |
CATCCTAGGTGCCTCGCCAG+TGG | - | chr3.1:59283371-59283390 | None:intergenic | 65.0% | |
CCAGAGCAAAGCTCCGTCCG+AGG | + | chr3.1:59282404-59282423 | MS.gene039961:intron | 65.0% | |
CCTCGGACGGAGCTTTGCTC+TGG | - | chr3.1:59282407-59282426 | None:intergenic | 65.0% | |
CGGTGCTTCCAGTGCCAGTG+AGG | + | chr3.1:59283142-59283161 | MS.gene039961:intron | 65.0% | |
! | CACTGGCGAGGCACCTAGGA+TGG | + | chr3.1:59283369-59283388 | MS.gene039961:intron | 65.0% |
CGAGGGGTCCGAGGAGTTCC+TGG | - | chr3.1:59284846-59284865 | None:intergenic | 70.0% | |
GAAGGACCAGGCCGCCACCA+AGG | - | chr3.1:59282231-59282250 | None:intergenic | 70.0% | |
! | GGACCACTGGCGAGGCACCT+AGG | + | chr3.1:59283365-59283384 | MS.gene039961:intron | 70.0% |
!! | GAGCAGCCTTGGTGGCGGCC+TGG | + | chr3.1:59282222-59282241 | MS.gene039961:intron | 75.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 59278500 | 59284920 | 59278500 | ID=MS.gene039961 |
chr3.1 | mRNA | 59278500 | 59284920 | 59278500 | ID=MS.gene039961.t1;Parent=MS.gene039961 |
chr3.1 | exon | 59278500 | 59278613 | 59278500 | ID=MS.gene039961.t1.exon1;Parent=MS.gene039961.t1 |
chr3.1 | CDS | 59278500 | 59278613 | 59278500 | ID=cds.MS.gene039961.t1;Parent=MS.gene039961.t1 |
chr3.1 | exon | 59280501 | 59280750 | 59280501 | ID=MS.gene039961.t1.exon2;Parent=MS.gene039961.t1 |
chr3.1 | CDS | 59280501 | 59280750 | 59280501 | ID=cds.MS.gene039961.t1;Parent=MS.gene039961.t1 |
chr3.1 | exon | 59280835 | 59281042 | 59280835 | ID=MS.gene039961.t1.exon3;Parent=MS.gene039961.t1 |
chr3.1 | CDS | 59280835 | 59281042 | 59280835 | ID=cds.MS.gene039961.t1;Parent=MS.gene039961.t1 |
chr3.1 | exon | 59284194 | 59284425 | 59284194 | ID=MS.gene039961.t1.exon4;Parent=MS.gene039961.t1 |
chr3.1 | CDS | 59284194 | 59284425 | 59284194 | ID=cds.MS.gene039961.t1;Parent=MS.gene039961.t1 |
chr3.1 | exon | 59284702 | 59284920 | 59284702 | ID=MS.gene039961.t1.exon5;Parent=MS.gene039961.t1 |
chr3.1 | CDS | 59284702 | 59284920 | 59284702 | ID=cds.MS.gene039961.t1;Parent=MS.gene039961.t1 |
Gene Sequence |
Protein sequence |