Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene039634.t1 | RHN78338.1 | 97.9 | 429 | 9 | 0 | 1 | 429 | 1 | 429 | 6.60E-239 | 836.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene039634.t1 | O04496 | 46.9 | 448 | 205 | 9 | 3 | 428 | 12 | 448 | 3.8e-102 | 373.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene039634.t1 | A0A396JQ13 | 97.9 | 429 | 9 | 0 | 1 | 429 | 1 | 429 | 4.7e-239 | 836.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene039634 | MS.gene013054 | PPI |
MS.gene039634 | MS.gene48428 | PPI |
MS.gene039634 | MS.gene052169 | PPI |
MS.gene020419 | MS.gene039634 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene039634.t1 | MTR_1g037630 | 97.436 | 429 | 11 | 0 | 1 | 429 | 1 | 429 | 0.0 | 853 |
MS.gene039634.t1 | MTR_3g014290 | 95.105 | 429 | 9 | 1 | 1 | 429 | 1 | 417 | 0.0 | 822 |
MS.gene039634.t1 | MTR_8g039540 | 82.009 | 428 | 76 | 1 | 3 | 429 | 7 | 434 | 0.0 | 702 |
MS.gene039634.t1 | MTR_3g100500 | 53.864 | 440 | 186 | 9 | 1 | 428 | 3 | 437 | 2.44e-143 | 416 |
MS.gene039634.t1 | MTR_3g097150 | 31.592 | 402 | 232 | 13 | 47 | 421 | 54 | 439 | 3.64e-54 | 187 |
MS.gene039634.t1 | MTR_1g115210 | 34.857 | 350 | 210 | 8 | 90 | 428 | 144 | 486 | 1.14e-53 | 186 |
MS.gene039634.t1 | MTR_7g117430 | 35.143 | 350 | 212 | 6 | 90 | 428 | 139 | 484 | 7.61e-51 | 179 |
MS.gene039634.t1 | MTR_3g053710 | 29.078 | 423 | 265 | 13 | 29 | 428 | 56 | 466 | 5.51e-48 | 171 |
MS.gene039634.t1 | MTR_1g111350 | 31.343 | 402 | 242 | 10 | 46 | 428 | 81 | 467 | 1.91e-46 | 166 |
MS.gene039634.t1 | MTR_4g007740 | 32.095 | 377 | 212 | 13 | 79 | 429 | 120 | 478 | 3.85e-46 | 166 |
MS.gene039634.t1 | MTR_2g028190 | 31.478 | 467 | 256 | 20 | 8 | 428 | 3 | 451 | 2.66e-45 | 163 |
MS.gene039634.t1 | MTR_1g039270 | 33.811 | 349 | 216 | 7 | 90 | 428 | 126 | 469 | 2.93e-45 | 163 |
MS.gene039634.t1 | MTR_3g046300 | 33.422 | 374 | 204 | 11 | 90 | 428 | 95 | 458 | 1.61e-42 | 155 |
MS.gene039634.t1 | MTR_6g085010 | 34.393 | 346 | 206 | 10 | 93 | 428 | 157 | 491 | 1.75e-42 | 156 |
MS.gene039634.t1 | MTR_8g103880 | 29.107 | 347 | 227 | 9 | 93 | 428 | 117 | 455 | 2.71e-41 | 152 |
MS.gene039634.t1 | MTR_3g053980 | 30.137 | 438 | 256 | 16 | 29 | 428 | 60 | 485 | 2.40e-39 | 147 |
MS.gene039634.t1 | MTR_5g091130 | 31.726 | 394 | 225 | 15 | 67 | 428 | 172 | 553 | 3.45e-38 | 145 |
MS.gene039634.t1 | MTR_5g038360 | 29.425 | 452 | 279 | 17 | 1 | 429 | 1 | 435 | 3.89e-38 | 143 |
MS.gene039634.t1 | MTR_0036s0110 | 28.738 | 428 | 264 | 16 | 28 | 429 | 29 | 441 | 1.01e-37 | 142 |
MS.gene039634.t1 | MTR_3g065160 | 29.558 | 362 | 219 | 15 | 94 | 429 | 76 | 427 | 1.38e-36 | 139 |
MS.gene039634.t1 | MTR_0024s0040 | 29.953 | 424 | 257 | 16 | 31 | 429 | 1 | 409 | 2.05e-36 | 138 |
MS.gene039634.t1 | MTR_0036s0070 | 27.991 | 443 | 280 | 16 | 6 | 429 | 3 | 425 | 2.56e-35 | 135 |
MS.gene039634.t1 | MTR_4g100990 | 30.175 | 401 | 210 | 15 | 93 | 428 | 75 | 470 | 3.23e-35 | 136 |
MS.gene039634.t1 | MTR_7g062360 | 29.189 | 370 | 220 | 14 | 95 | 428 | 62 | 425 | 1.18e-34 | 134 |
MS.gene039634.t1 | MTR_5g080890 | 27.594 | 424 | 269 | 15 | 27 | 429 | 26 | 432 | 2.04e-34 | 133 |
MS.gene039634.t1 | MTR_3g028120 | 27.126 | 435 | 271 | 17 | 23 | 429 | 21 | 437 | 4.16e-34 | 132 |
MS.gene039634.t1 | MTR_5g080960 | 27.358 | 424 | 270 | 15 | 27 | 429 | 26 | 432 | 1.65e-33 | 130 |
MS.gene039634.t1 | MTR_8g096990 | 26.244 | 442 | 291 | 15 | 5 | 429 | 7 | 430 | 6.46e-33 | 129 |
MS.gene039634.t1 | MTR_5g077850 | 28.997 | 369 | 216 | 16 | 94 | 429 | 83 | 438 | 7.81e-33 | 129 |
MS.gene039634.t1 | MTR_7g105850 | 29.091 | 385 | 214 | 14 | 93 | 428 | 91 | 465 | 4.00e-32 | 127 |
MS.gene039634.t1 | MTR_0036s0050 | 27.778 | 450 | 281 | 16 | 6 | 429 | 3 | 434 | 7.05e-32 | 126 |
MS.gene039634.t1 | MTR_5g012490 | 28.087 | 413 | 224 | 15 | 79 | 428 | 67 | 469 | 1.03e-31 | 126 |
MS.gene039634.t1 | MTR_8g038280 | 27.152 | 453 | 277 | 19 | 5 | 429 | 7 | 434 | 3.02e-31 | 124 |
MS.gene039634.t1 | MTR_3g068000 | 28.312 | 385 | 212 | 16 | 92 | 428 | 73 | 441 | 3.89e-31 | 124 |
MS.gene039634.t1 | MTR_5g044570 | 28.182 | 440 | 260 | 15 | 7 | 429 | 10 | 410 | 6.21e-30 | 120 |
MS.gene039634.t1 | MTR_8g038310 | 28.000 | 425 | 247 | 16 | 5 | 409 | 7 | 392 | 7.29e-30 | 120 |
MS.gene039634.t1 | MTR_5g008110 | 31.081 | 370 | 221 | 16 | 85 | 429 | 54 | 414 | 1.01e-29 | 120 |
MS.gene039634.t1 | MTR_2g059460 | 28.686 | 373 | 219 | 17 | 88 | 429 | 49 | 405 | 4.38e-29 | 117 |
MS.gene039634.t1 | MTR_2g059490 | 28.177 | 362 | 234 | 14 | 88 | 429 | 54 | 409 | 1.61e-28 | 117 |
MS.gene039634.t1 | MTR_5g008150 | 28.678 | 401 | 225 | 16 | 68 | 429 | 33 | 411 | 4.12e-27 | 112 |
MS.gene039634.t1 | MTR_8g038250 | 26.667 | 450 | 268 | 17 | 4 | 429 | 3 | 414 | 1.65e-26 | 110 |
MS.gene039634.t1 | MTR_5g044770 | 26.684 | 386 | 247 | 16 | 27 | 391 | 26 | 396 | 1.78e-26 | 110 |
MS.gene039634.t1 | MTR_5g016260 | 25.420 | 417 | 249 | 20 | 38 | 429 | 53 | 432 | 3.01e-26 | 111 |
MS.gene039634.t1 | MTR_5g016260 | 26.243 | 362 | 224 | 18 | 93 | 429 | 89 | 432 | 4.36e-26 | 111 |
MS.gene039634.t1 | MTR_6g090290 | 26.949 | 449 | 286 | 18 | 3 | 429 | 7 | 435 | 9.67e-26 | 108 |
MS.gene039634.t1 | MTR_1g060750 | 28.451 | 355 | 205 | 16 | 93 | 429 | 52 | 375 | 1.22e-25 | 107 |
MS.gene039634.t1 | MTR_5g077920 | 29.810 | 369 | 215 | 17 | 94 | 429 | 70 | 427 | 1.23e-25 | 108 |
MS.gene039634.t1 | MTR_4g056420 | 25.728 | 412 | 252 | 19 | 57 | 429 | 41 | 437 | 1.06e-24 | 106 |
MS.gene039634.t1 | MTR_2g084550 | 25.666 | 413 | 251 | 18 | 57 | 429 | 42 | 438 | 2.06e-24 | 105 |
MS.gene039634.t1 | MTR_2g067830 | 27.548 | 363 | 222 | 16 | 93 | 429 | 58 | 405 | 2.46e-24 | 104 |
MS.gene039634.t1 | MTR_2g070430 | 28.418 | 373 | 215 | 13 | 90 | 421 | 85 | 446 | 2.91e-24 | 104 |
MS.gene039634.t1 | MTR_5g022880 | 29.144 | 374 | 202 | 17 | 93 | 428 | 113 | 461 | 1.06e-23 | 103 |
MS.gene039634.t1 | MTR_2g063110 | 25.495 | 455 | 241 | 21 | 53 | 424 | 65 | 504 | 1.56e-23 | 103 |
MS.gene039634.t1 | MTR_6g088760 | 25.926 | 432 | 263 | 18 | 11 | 413 | 17 | 420 | 2.03e-23 | 102 |
MS.gene039634.t1 | MTR_4g095270 | 25.485 | 361 | 226 | 18 | 93 | 428 | 81 | 423 | 6.33e-23 | 101 |
MS.gene039634.t1 | MTR_4g095270 | 25.485 | 361 | 226 | 18 | 93 | 428 | 81 | 423 | 8.30e-23 | 101 |
MS.gene039634.t1 | MTR_4g045857 | 32.218 | 239 | 139 | 10 | 68 | 284 | 29 | 266 | 2.14e-22 | 97.1 |
MS.gene039634.t1 | MTR_1g061940 | 24.711 | 433 | 264 | 19 | 42 | 429 | 30 | 445 | 5.76e-22 | 98.6 |
MS.gene039634.t1 | MTR_2g055840 | 28.650 | 363 | 211 | 17 | 93 | 419 | 14 | 364 | 1.67e-21 | 95.9 |
MS.gene039634.t1 | MTR_7g102750 | 25.594 | 379 | 221 | 19 | 93 | 429 | 82 | 441 | 1.89e-21 | 97.1 |
MS.gene039634.t1 | MTR_1g078240 | 25.737 | 373 | 230 | 18 | 93 | 429 | 70 | 431 | 4.30e-21 | 95.5 |
MS.gene039634.t1 | MTR_1g078240 | 25.538 | 372 | 231 | 17 | 93 | 429 | 70 | 430 | 1.38e-20 | 94.0 |
MS.gene039634.t1 | MTR_7g021510 | 26.385 | 379 | 220 | 18 | 93 | 429 | 73 | 434 | 6.18e-20 | 92.0 |
MS.gene039634.t1 | MTR_7g102750 | 27.778 | 324 | 180 | 17 | 93 | 377 | 82 | 390 | 1.27e-19 | 90.9 |
MS.gene039634.t1 | MTR_2g105300 | 27.439 | 328 | 193 | 16 | 115 | 415 | 58 | 367 | 1.33e-19 | 90.5 |
MS.gene039634.t1 | MTR_5g008070 | 26.862 | 443 | 247 | 21 | 23 | 429 | 24 | 425 | 1.49e-19 | 90.5 |
MS.gene039634.t1 | MTR_1g078240 | 27.303 | 304 | 179 | 14 | 93 | 364 | 70 | 363 | 2.45e-18 | 86.7 |
MS.gene039634.t1 | MTR_5g061690 | 26.039 | 361 | 217 | 12 | 99 | 428 | 108 | 449 | 3.68e-18 | 87.0 |
MS.gene039634.t1 | MTR_4g109760 | 28.075 | 374 | 235 | 15 | 75 | 429 | 39 | 397 | 1.08e-17 | 84.7 |
MS.gene039634.t1 | MTR_3g087780 | 26.503 | 366 | 212 | 17 | 99 | 428 | 106 | 450 | 2.37e-17 | 84.7 |
MS.gene039634.t1 | MTR_4g023650 | 26.455 | 378 | 216 | 17 | 93 | 428 | 62 | 419 | 9.77e-17 | 82.0 |
MS.gene039634.t1 | MTR_1g029810 | 26.685 | 371 | 218 | 17 | 93 | 428 | 58 | 409 | 4.18e-16 | 80.1 |
MS.gene039634.t1 | MTR_1g029810 | 26.685 | 371 | 218 | 17 | 93 | 428 | 58 | 409 | 9.41e-16 | 79.3 |
MS.gene039634.t1 | MTR_3g006820 | 24.138 | 377 | 224 | 17 | 93 | 429 | 59 | 413 | 3.49e-15 | 77.4 |
MS.gene039634.t1 | MTR_7g080230 | 27.035 | 344 | 205 | 18 | 119 | 429 | 31 | 361 | 2.11e-14 | 75.1 |
MS.gene039634.t1 | MTR_3g096930 | 25.500 | 400 | 235 | 19 | 68 | 429 | 61 | 435 | 2.21e-14 | 75.1 |
MS.gene039634.t1 | MTR_8g094590 | 25.926 | 432 | 254 | 24 | 37 | 429 | 21 | 425 | 5.96e-14 | 73.6 |
MS.gene039634.t1 | MTR_2g022450 | 22.368 | 380 | 244 | 14 | 93 | 427 | 41 | 414 | 2.56e-13 | 71.6 |
MS.gene039634.t1 | MTR_8g094590 | 27.974 | 311 | 176 | 18 | 37 | 325 | 21 | 305 | 3.67e-13 | 70.5 |
MS.gene039634.t1 | MTR_8g094590 | 27.640 | 322 | 181 | 19 | 37 | 332 | 21 | 316 | 5.38e-13 | 70.5 |
MS.gene039634.t1 | MTR_2g022490 | 22.823 | 333 | 217 | 13 | 93 | 388 | 44 | 373 | 1.42e-12 | 69.3 |
MS.gene039634.t1 | MTR_5g061690 | 25.163 | 306 | 193 | 10 | 141 | 428 | 23 | 310 | 2.81e-12 | 68.2 |
MS.gene039634.t1 | MTR_3g087780 | 25.312 | 320 | 196 | 14 | 132 | 428 | 9 | 308 | 1.58e-11 | 65.9 |
MS.gene039634.t1 | MTR_3g087780 | 24.688 | 320 | 198 | 13 | 132 | 428 | 45 | 344 | 2.08e-11 | 65.9 |
MS.gene039634.t1 | MTR_4g117090 | 23.206 | 418 | 239 | 16 | 78 | 427 | 38 | 441 | 2.86e-11 | 65.5 |
MS.gene039634.t1 | MTR_1g072420 | 22.995 | 374 | 232 | 15 | 101 | 427 | 55 | 419 | 4.40e-11 | 64.7 |
MS.gene039634.t1 | MTR_2g022430 | 24.682 | 393 | 219 | 19 | 93 | 427 | 40 | 413 | 4.41e-11 | 64.7 |
MS.gene039634.t1 | MTR_4g023630 | 24.934 | 381 | 218 | 18 | 93 | 428 | 62 | 419 | 5.06e-11 | 64.7 |
MS.gene039634.t1 | MTR_1g072380 | 24.129 | 402 | 215 | 18 | 93 | 427 | 57 | 435 | 7.96e-11 | 63.9 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene039634.t1 | AT5G07030 | 70.682 | 440 | 115 | 6 | 4 | 429 | 16 | 455 | 0.0 | 603 |
MS.gene039634.t1 | AT3G54400 | 68.689 | 412 | 119 | 6 | 21 | 429 | 21 | 425 | 0.0 | 572 |
MS.gene039634.t1 | AT1G09750 | 51.799 | 417 | 185 | 8 | 26 | 428 | 34 | 448 | 3.24e-141 | 411 |
MS.gene039634.t1 | AT5G10770 | 31.382 | 427 | 255 | 13 | 29 | 429 | 60 | 474 | 8.79e-53 | 184 |
MS.gene039634.t1 | AT3G25700 | 32.843 | 408 | 233 | 13 | 57 | 428 | 47 | 449 | 2.17e-51 | 179 |
MS.gene039634.t1 | AT1G01300 | 33.807 | 352 | 214 | 8 | 90 | 428 | 139 | 484 | 1.34e-50 | 178 |
MS.gene039634.t1 | AT3G61820 | 35.393 | 356 | 209 | 7 | 90 | 428 | 132 | 483 | 2.80e-50 | 177 |
MS.gene039634.t1 | AT2G03200 | 31.180 | 356 | 213 | 9 | 90 | 421 | 104 | 451 | 3.01e-49 | 174 |
MS.gene039634.t1 | AT5G10760 | 32.936 | 419 | 245 | 12 | 29 | 428 | 63 | 464 | 1.43e-48 | 172 |
MS.gene039634.t1 | AT3G20015 | 33.333 | 348 | 218 | 6 | 90 | 428 | 128 | 470 | 3.12e-48 | 171 |
MS.gene039634.t1 | AT3G18490 | 33.333 | 360 | 220 | 10 | 80 | 428 | 150 | 500 | 3.83e-45 | 164 |
MS.gene039634.t1 | AT1G25510 | 30.670 | 388 | 237 | 10 | 64 | 428 | 105 | 483 | 1.41e-42 | 156 |
MS.gene039634.t1 | AT1G79720 | 30.585 | 376 | 220 | 14 | 79 | 428 | 122 | 482 | 1.08e-39 | 149 |
MS.gene039634.t1 | AT1G66180 | 30.424 | 401 | 234 | 18 | 63 | 429 | 38 | 427 | 1.57e-39 | 147 |
MS.gene039634.t1 | AT3G52500 | 31.169 | 385 | 211 | 14 | 93 | 429 | 90 | 468 | 2.04e-39 | 147 |
MS.gene039634.t1 | AT5G45120 | 30.500 | 400 | 210 | 15 | 93 | 428 | 83 | 478 | 3.92e-39 | 147 |
MS.gene039634.t1 | AT5G37540 | 29.825 | 399 | 231 | 18 | 68 | 428 | 51 | 438 | 8.12e-38 | 142 |
MS.gene039634.t1 | AT2G39710 | 30.458 | 371 | 212 | 16 | 92 | 424 | 64 | 426 | 1.15e-34 | 134 |
MS.gene039634.t1 | AT1G64830 | 29.108 | 426 | 259 | 16 | 27 | 429 | 24 | 429 | 1.20e-34 | 134 |
MS.gene039634.t1 | AT3G59080 | 28.702 | 439 | 244 | 14 | 54 | 428 | 99 | 532 | 1.80e-34 | 135 |
MS.gene039634.t1 | AT2G42980 | 28.833 | 437 | 245 | 15 | 53 | 428 | 93 | 524 | 4.09e-34 | 134 |
MS.gene039634.t1 | AT5G33340 | 27.446 | 419 | 272 | 15 | 28 | 428 | 30 | 434 | 4.67e-30 | 121 |
MS.gene039634.t1 | AT5G22850 | 26.005 | 423 | 255 | 19 | 48 | 429 | 36 | 441 | 2.32e-28 | 117 |
MS.gene039634.t1 | AT4G30030 | 28.647 | 377 | 235 | 15 | 69 | 428 | 60 | 419 | 2.39e-28 | 116 |
MS.gene039634.t1 | AT5G02190 | 28.338 | 367 | 217 | 15 | 102 | 428 | 82 | 442 | 4.86e-28 | 115 |
MS.gene039634.t1 | AT1G08210 | 27.952 | 415 | 255 | 15 | 48 | 429 | 38 | 441 | 6.48e-28 | 115 |
MS.gene039634.t1 | AT1G08210 | 27.952 | 415 | 255 | 15 | 48 | 429 | 72 | 475 | 9.92e-28 | 115 |
MS.gene039634.t1 | AT1G08210 | 27.952 | 415 | 255 | 15 | 48 | 429 | 86 | 489 | 1.05e-27 | 115 |
MS.gene039634.t1 | AT4G30040 | 27.889 | 398 | 236 | 16 | 55 | 421 | 48 | 425 | 1.49e-27 | 114 |
MS.gene039634.t1 | AT2G23945 | 26.683 | 416 | 254 | 17 | 48 | 428 | 49 | 448 | 1.62e-27 | 114 |
MS.gene039634.t1 | AT3G59080 | 27.765 | 425 | 230 | 13 | 54 | 428 | 99 | 496 | 3.23e-27 | 114 |
MS.gene039634.t1 | AT3G12700 | 28.125 | 416 | 250 | 16 | 47 | 429 | 62 | 461 | 7.70e-27 | 112 |
MS.gene039634.t1 | AT3G02740 | 27.833 | 406 | 240 | 19 | 58 | 429 | 54 | 440 | 1.22e-26 | 112 |
MS.gene039634.t1 | AT3G02740 | 28.571 | 371 | 216 | 18 | 93 | 429 | 10 | 365 | 3.48e-26 | 110 |
MS.gene039634.t1 | AT1G08210 | 29.620 | 368 | 219 | 13 | 48 | 383 | 38 | 397 | 1.75e-25 | 108 |
MS.gene039634.t1 | AT5G43100 | 25.337 | 371 | 229 | 17 | 86 | 429 | 69 | 418 | 6.61e-25 | 107 |
MS.gene039634.t1 | AT5G43100 | 25.824 | 364 | 222 | 17 | 93 | 429 | 76 | 418 | 7.56e-25 | 107 |
MS.gene039634.t1 | AT2G28040 | 27.794 | 349 | 202 | 16 | 87 | 415 | 50 | 368 | 3.71e-23 | 100 |
MS.gene039634.t1 | AT2G28040 | 27.794 | 349 | 202 | 16 | 87 | 415 | 59 | 377 | 6.61e-23 | 100 |
MS.gene039634.t1 | AT2G28030 | 27.419 | 310 | 191 | 11 | 93 | 388 | 61 | 350 | 7.18e-23 | 100 |
MS.gene039634.t1 | AT4G16563 | 27.635 | 427 | 222 | 16 | 79 | 428 | 75 | 491 | 1.18e-22 | 100 |
MS.gene039634.t1 | AT3G50050 | 27.123 | 365 | 218 | 18 | 93 | 429 | 93 | 437 | 1.51e-22 | 100 |
MS.gene039634.t1 | AT2G36670 | 23.721 | 430 | 272 | 17 | 42 | 429 | 43 | 458 | 1.99e-22 | 99.8 |
MS.gene039634.t1 | AT2G35615 | 27.371 | 464 | 267 | 22 | 7 | 429 | 10 | 444 | 3.28e-22 | 99.0 |
MS.gene039634.t1 | AT2G36670 | 24.665 | 373 | 231 | 16 | 93 | 429 | 34 | 392 | 4.28e-22 | 98.6 |
MS.gene039634.t1 | AT2G36670 | 24.665 | 373 | 231 | 16 | 93 | 429 | 34 | 392 | 4.28e-22 | 98.6 |
MS.gene039634.t1 | AT5G36260 | 24.457 | 368 | 236 | 17 | 93 | 429 | 78 | 434 | 4.29e-22 | 98.6 |
MS.gene039634.t1 | AT1G05840 | 27.346 | 373 | 222 | 17 | 93 | 429 | 80 | 439 | 4.83e-22 | 98.6 |
MS.gene039634.t1 | AT2G36670 | 24.665 | 373 | 231 | 16 | 93 | 429 | 105 | 463 | 8.96e-22 | 97.8 |
MS.gene039634.t1 | AT1G31450 | 27.231 | 437 | 257 | 19 | 30 | 429 | 30 | 442 | 1.61e-21 | 96.7 |
MS.gene039634.t1 | AT2G28225 | 28.045 | 353 | 200 | 17 | 93 | 421 | 67 | 389 | 8.03e-21 | 94.4 |
MS.gene039634.t1 | AT2G28010 | 25.146 | 342 | 221 | 12 | 87 | 415 | 59 | 378 | 8.05e-21 | 94.4 |
MS.gene039634.t1 | AT3G51350 | 26.720 | 378 | 208 | 17 | 93 | 428 | 102 | 452 | 5.82e-19 | 89.7 |
MS.gene039634.t1 | AT1G65240 | 24.804 | 383 | 241 | 18 | 79 | 429 | 60 | 427 | 9.61e-19 | 88.6 |
MS.gene039634.t1 | AT3G25700 | 34.091 | 176 | 91 | 8 | 57 | 210 | 47 | 219 | 1.06e-17 | 84.3 |
MS.gene039634.t1 | AT3G25700 | 33.588 | 131 | 79 | 2 | 304 | 428 | 219 | 347 | 2.90e-11 | 65.1 |
MS.gene039634.t1 | AT3G51340 | 25.606 | 371 | 215 | 15 | 93 | 428 | 103 | 447 | 1.35e-17 | 85.5 |
MS.gene039634.t1 | AT2G28220 | 26.087 | 345 | 206 | 14 | 93 | 415 | 67 | 384 | 2.41e-17 | 84.0 |
MS.gene039634.t1 | AT3G51360 | 23.770 | 366 | 230 | 13 | 93 | 428 | 99 | 445 | 2.50e-15 | 78.2 |
MS.gene039634.t1 | AT3G51360 | 23.562 | 365 | 232 | 12 | 93 | 428 | 89 | 435 | 2.94e-15 | 78.2 |
MS.gene039634.t1 | AT3G51360 | 23.562 | 365 | 232 | 12 | 93 | 428 | 5 | 351 | 3.07e-15 | 77.4 |
MS.gene039634.t1 | AT1G77480 | 26.984 | 378 | 209 | 21 | 93 | 428 | 67 | 419 | 3.16e-15 | 77.8 |
MS.gene039634.t1 | AT1G77480 | 26.984 | 378 | 209 | 21 | 93 | 428 | 67 | 419 | 3.47e-15 | 77.4 |
MS.gene039634.t1 | AT2G17760 | 24.112 | 394 | 231 | 18 | 76 | 428 | 83 | 449 | 5.41e-15 | 77.4 |
MS.gene039634.t1 | AT4G33490 | 24.599 | 374 | 210 | 17 | 93 | 422 | 60 | 405 | 7.81e-15 | 76.6 |
MS.gene039634.t1 | AT5G10080 | 23.301 | 412 | 258 | 15 | 57 | 428 | 60 | 453 | 1.52e-14 | 75.9 |
MS.gene039634.t1 | AT4G12920 | 22.034 | 354 | 234 | 13 | 93 | 428 | 58 | 387 | 5.11e-14 | 73.6 |
MS.gene039634.t1 | AT4G33490 | 28.090 | 267 | 146 | 14 | 93 | 336 | 57 | 300 | 6.86e-14 | 73.6 |
MS.gene039634.t1 | AT3G51360 | 23.677 | 359 | 224 | 14 | 76 | 403 | 81 | 420 | 7.61e-13 | 70.5 |
MS.gene039634.t1 | AT3G51360 | 23.677 | 359 | 224 | 14 | 76 | 403 | 71 | 410 | 8.74e-13 | 70.1 |
MS.gene039634.t1 | AT3G51360 | 25.338 | 296 | 172 | 13 | 99 | 364 | 95 | 371 | 3.41e-12 | 68.2 |
MS.gene039634.t1 | AT3G51360 | 25.338 | 296 | 172 | 13 | 99 | 364 | 105 | 381 | 3.45e-12 | 68.2 |
MS.gene039634.t1 | AT1G44130 | 25.714 | 385 | 203 | 19 | 93 | 428 | 49 | 399 | 3.68e-12 | 68.2 |
MS.gene039634.t1 | AT3G51360 | 25.573 | 262 | 152 | 11 | 93 | 330 | 99 | 341 | 3.21e-11 | 64.7 |
MS.gene039634.t1 | AT3G42550 | 20.343 | 408 | 262 | 13 | 42 | 429 | 26 | 390 | 3.51e-11 | 65.1 |
MS.gene039634.t1 | AT1G03220 | 22.603 | 438 | 244 | 17 | 41 | 427 | 24 | 417 | 4.67e-11 | 64.7 |
MS.gene039634.t1 | AT1G03230 | 24.242 | 363 | 228 | 16 | 108 | 427 | 60 | 418 | 8.81e-11 | 63.9 |
Find 147 sgRNAs with CRISPR-Local
Find 240 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ATGTTAACTTGGAAGCAATT+AGG | 0.215956 | 3.4:-10289364 | MS.gene039634:CDS |
ATGTGGACTGATAGAGGTTT+TGG | 0.221853 | 3.4:+10289516 | None:intergenic |
GAGGAATATCAACGACTTTC+CGG | 0.223380 | 3.4:+10289336 | None:intergenic |
TACATTGTTAGGGCTAAAAT+TGG | 0.237202 | 3.4:-10291776 | MS.gene039634:CDS |
AGAGTCCAACTTACATTGTT+AGG | 0.250009 | 3.4:-10291787 | MS.gene039634:CDS |
TCCCATGAAAGTGGCTTTGA+TGG | 0.283362 | 3.4:+10291920 | None:intergenic |
TTCAAGTCTCTTAACTTCTC+TGG | 0.284577 | 3.4:-10289473 | MS.gene039634:CDS |
AGTGGCTTTGATGGCCTAAA+TGG | 0.286534 | 3.4:+10291929 | None:intergenic |
TGCCCCACCACAAGGTCTAT+TGG | 0.290920 | 3.4:-10289576 | MS.gene039634:CDS |
TTGTCTTGGACATCACATTT+GGG | 0.295714 | 3.4:+10291995 | None:intergenic |
TAATATAGTGATGATCTTCT+AGG | 0.303718 | 3.4:+10289386 | None:intergenic |
TTAGCCCATGTTCCCCATTT+AGG | 0.313010 | 3.4:-10291943 | MS.gene039634:CDS |
TTGTGTCTTTGGCTTGCATC+TGG | 0.313559 | 3.4:+10291885 | None:intergenic |
ACTTCAATTCCTTGATAGTT+TGG | 0.314174 | 3.4:-10291858 | MS.gene039634:CDS |
GCCGGTACCATCTTTGATTC+AGG | 0.315313 | 3.4:-10289281 | MS.gene039634:intron |
TGTTAACTTGGAAGCAATTA+GGG | 0.316746 | 3.4:-10289363 | MS.gene039634:CDS |
TTGAAGTCTAGTTGTGTCTT+TGG | 0.320386 | 3.4:+10291874 | None:intergenic |
GTTATTGTAGGTACAACTAT+TGG | 0.323574 | 3.4:+10288927 | None:intergenic |
ATTGTCTTGGACATCACATT+TGG | 0.331624 | 3.4:+10291994 | None:intergenic |
ATCCTCTTGGGCTGAGCAAC+AGG | 0.340293 | 3.4:+10289434 | None:intergenic |
GCAACACCAACCCTAGAGTT+AGG | 0.342924 | 3.4:+10288732 | None:intergenic |
TCAGTTGTACCTATTGCTTC+TGG | 0.351822 | 3.4:-10291824 | MS.gene039634:CDS |
TGGGGTTTAGTCCTTGGACT+AGG | 0.351891 | 3.4:+10292014 | None:intergenic |
TCCACCTCAAACTTTGCTTT+TGG | 0.353103 | 3.4:-10291750 | MS.gene039634:CDS |
CACATTTGGGGTTTAGTCCT+TGG | 0.354918 | 3.4:+10292008 | None:intergenic |
ACCACAAGGTCTATTGGGCT+TGG | 0.360253 | 3.4:-10289570 | MS.gene039634:CDS |
GCCCCACCACAAGGTCTATT+GGG | 0.360432 | 3.4:-10289575 | MS.gene039634:CDS |
TTCTCTGGGTCTTTGAGACT+TGG | 0.367422 | 3.4:-10289458 | MS.gene039634:CDS |
CCGAATGTGTAGCTAGGAAC+TGG | 0.381713 | 3.4:+10289626 | None:intergenic |
TTATTGTAGGTACAACTATT+GGG | 0.398273 | 3.4:+10288928 | None:intergenic |
TCAAGTCTCTTAACTTCTCT+GGG | 0.406816 | 3.4:-10289472 | MS.gene039634:CDS |
CAACACCGAGTTCACATTAT+CGG | 0.406860 | 3.4:+10288806 | None:intergenic |
AGGGATGTCACTGTGAGCTT+TGG | 0.406981 | 3.4:+10288978 | None:intergenic |
GGCCATCAAAGCCACTTTCA+TGG | 0.410623 | 3.4:-10291922 | MS.gene039634:CDS |
GAGGGAAAGTGTGAGTTTCA+TGG | 0.412360 | 3.4:+10292054 | None:intergenic |
TTCCTCTATTGCAGCTAACT+TGG | 0.417975 | 3.4:-10289678 | MS.gene039634:CDS |
CGCCGGCAGCACCACATGTT+TGG | 0.418281 | 3.4:-10288844 | MS.gene039634:CDS |
AGGGGTATACTTAATCCTCT+TGG | 0.430562 | 3.4:+10289421 | None:intergenic |
GGATTAAACGCCAATGCGGC+TGG | 0.437790 | 3.4:+10289314 | None:intergenic |
CTTGGACTAGGGAGAGGAAT+AGG | 0.438297 | 3.4:+10292026 | None:intergenic |
AACACCGAGTTCACATTATC+GGG | 0.450137 | 3.4:+10288807 | None:intergenic |
GAGTCCAACTTACATTGTTA+GGG | 0.456447 | 3.4:-10291786 | MS.gene039634:CDS |
GTGGCTTTGATGGCCTAAAT+GGG | 0.457090 | 3.4:+10291930 | None:intergenic |
TCATTGATGTCCCTAACTCT+AGG | 0.457703 | 3.4:-10288743 | MS.gene039634:CDS |
GGTCTATTGGGCTTGGGTCG+AGG | 0.461415 | 3.4:-10289563 | MS.gene039634:CDS |
ATGAGTTCCGGCGAAGAGTT+GGG | 0.462368 | 3.4:-10289001 | MS.gene039634:CDS |
GGGGTTTAGTCCTTGGACTA+GGG | 0.468206 | 3.4:+10292015 | None:intergenic |
TACCAAGTTAGCTGCAATAG+AGG | 0.469055 | 3.4:+10289676 | None:intergenic |
TGCTGCTCCTGAATGCAAAC+AGG | 0.470735 | 3.4:-10291618 | MS.gene039634:intron |
CCACAAGGTCTATTGGGCTT+GGG | 0.475793 | 3.4:-10289569 | MS.gene039634:CDS |
GGGGTATACTTAATCCTCTT+GGG | 0.477205 | 3.4:+10289422 | None:intergenic |
TCTCTGGGTCTTTGAGACTT+GGG | 0.480344 | 3.4:-10289457 | MS.gene039634:CDS |
TTCTAGCTACCAAACTATCA+AGG | 0.482357 | 3.4:+10291849 | None:intergenic |
TAGAGGAACTGCCATAGGTT+AGG | 0.483289 | 3.4:+10289693 | None:intergenic |
TGGCGGTCAGAGATGAGTTC+CGG | 0.483441 | 3.4:-10289013 | MS.gene039634:CDS |
ATTCCTTGCACTGCTTGTGA+TGG | 0.484236 | 3.4:-10291698 | MS.gene039634:CDS |
TGCAATTTCAACCTAACCTA+TGG | 0.486060 | 3.4:-10289704 | MS.gene039634:CDS |
ATTTGTCTACCAGAAGCAAT+AGG | 0.487565 | 3.4:+10291815 | None:intergenic |
AGGAACTGGGTCAGTGGCTA+AGG | 0.488633 | 3.4:+10289640 | None:intergenic |
CATGAGCTCACACCACAACT+AGG | 0.490130 | 3.4:+10289725 | None:intergenic |
AGCATGTGTCAAACCCTCCT+AGG | 0.490363 | 3.4:+10288958 | None:intergenic |
TTAGCCCTAACAATGTAAGT+TGG | 0.493596 | 3.4:+10291782 | None:intergenic |
ATCACTATATTATGTTAACT+TGG | 0.495052 | 3.4:-10289375 | MS.gene039634:CDS |
GCCATCAAAGCCACTTTCAT+GGG | 0.495343 | 3.4:-10291921 | MS.gene039634:CDS |
GGCCAAACATGTGGTGCTGC+CGG | 0.496181 | 3.4:+10288842 | None:intergenic |
TTTGAGACAAAAGTGACAAC+GGG | 0.499233 | 3.4:+10289540 | None:intergenic |
GATGAGTTCCGGCGAAGAGT+TGG | 0.502728 | 3.4:-10289002 | MS.gene039634:CDS |
CATTGATGTCCCTAACTCTA+GGG | 0.503024 | 3.4:-10288742 | MS.gene039634:CDS |
AAGAGAATGTGGACTGATAG+AGG | 0.503256 | 3.4:+10289510 | None:intergenic |
GATGGCCTAAATGGGGAACA+TGG | 0.508158 | 3.4:+10291938 | None:intergenic |
TAGACCTTGTGGTGGGGCAG+AGG | 0.509813 | 3.4:+10289580 | None:intergenic |
CCAGTTCCTAGCTACACATT+CGG | 0.509931 | 3.4:-10289626 | MS.gene039634:CDS |
GAGAACATGAATGTTATTGT+AGG | 0.510584 | 3.4:+10288915 | None:intergenic |
TGCCGGCGGTGCTATGTATA+AGG | 0.512204 | 3.4:+10288859 | None:intergenic |
TCTCTGACCGCCACATAGGC+CGG | 0.512315 | 3.4:+10289023 | None:intergenic |
TTCTAGGGTTCTTGAGAAGA+GGG | 0.513267 | 3.4:+10289402 | None:intergenic |
AATATAGTGATGATCTTCTA+GGG | 0.513975 | 3.4:+10289387 | None:intergenic |
ACACTTTCTTCCCATGAAAG+TGG | 0.514469 | 3.4:+10291911 | None:intergenic |
TGATATTCCTCCAGCCGCAT+TGG | 0.515123 | 3.4:-10289324 | MS.gene039634:CDS |
AACTTGGAAGCAATTAGGGT+TGG | 0.515766 | 3.4:-10289359 | MS.gene039634:CDS |
GCTAGTTGCACCGGCCTATG+TGG | 0.516589 | 3.4:-10289033 | MS.gene039634:CDS |
TGGAAGCAATTAGGGTTGGC+CGG | 0.516968 | 3.4:-10289355 | MS.gene039634:CDS |
CAACACCAACCCTAGAGTTA+GGG | 0.517242 | 3.4:+10288733 | None:intergenic |
TACCAGGTACCGTGTTTACT+CGG | 0.522295 | 3.4:-10289055 | MS.gene039634:intron |
TTGGCGTTTAATCCGACCAC+TGG | 0.524180 | 3.4:-10289305 | MS.gene039634:CDS |
TGGTGGGGCAGAGGTGCCTG+TGG | 0.527039 | 3.4:+10289589 | None:intergenic |
ACAATAACATTCATGTTCTC+CGG | 0.529103 | 3.4:-10288912 | MS.gene039634:CDS |
CAGCACCACATGTTTGGCCA+TGG | 0.538251 | 3.4:-10288838 | MS.gene039634:CDS |
TGTCTTTGGCTTGCATCTGG+AGG | 0.541236 | 3.4:+10291888 | None:intergenic |
CTTCTAGGGTTCTTGAGAAG+AGG | 0.543537 | 3.4:+10289401 | None:intergenic |
TTAGTCCTTGGACTAGGGAG+AGG | 0.549316 | 3.4:+10292020 | None:intergenic |
ATTATCGGGCGCAGCCGCCA+TGG | 0.549482 | 3.4:+10288821 | None:intergenic |
CTCACACCACAACTAGGGTT+AGG | 0.549658 | 3.4:+10289731 | None:intergenic |
GATGTCCCTAACTCTAGGGT+TGG | 0.549992 | 3.4:-10288738 | MS.gene039634:CDS |
GTTTACTCGGCTAGTTGCAC+CGG | 0.552558 | 3.4:-10289042 | MS.gene039634:CDS |
ATGGTACCGGCTCCAGTGGT+CGG | 0.555264 | 3.4:+10289293 | None:intergenic |
ATACTAGTAATGATGCTGCT+TGG | 0.557490 | 3.4:-10291721 | MS.gene039634:CDS |
CTATTCCTCTCCCTAGTCCA+AGG | 0.561125 | 3.4:-10292025 | MS.gene039634:CDS |
ACCTGAATCAAAGATGGTAC+CGG | 0.564438 | 3.4:+10289280 | None:intergenic |
AAGCTCACAGTGACATCCCT+AGG | 0.564717 | 3.4:-10288975 | MS.gene039634:CDS |
GGCCTGTTGCTCAGCCCAAG+AGG | 0.566991 | 3.4:-10289436 | MS.gene039634:CDS |
AGCCCAATAGACCTTGTGGT+GGG | 0.567593 | 3.4:+10289573 | None:intergenic |
TGTCTTGGACATCACATTTG+GGG | 0.569858 | 3.4:+10291996 | None:intergenic |
TTTAATCCGACCACTGGAGC+CGG | 0.572128 | 3.4:-10289299 | MS.gene039634:CDS |
AAGTTAAGAGACTTGAAACT+TGG | 0.573810 | 3.4:+10289479 | None:intergenic |
CACCACATGTTTGGCCATGG+CGG | 0.574505 | 3.4:-10288835 | MS.gene039634:CDS |
CAGGTACCTAACCCTAGTTG+TGG | 0.574866 | 3.4:-10289737 | MS.gene039634:CDS |
GCATGTGTCAAACCCTCCTA+GGG | 0.576135 | 3.4:+10288959 | None:intergenic |
GGGAGAGGAATAGGAACAAG+AGG | 0.576994 | 3.4:+10292035 | None:intergenic |
GGAGTGTTGAGCCATTGTCT+TGG | 0.579994 | 3.4:+10291981 | None:intergenic |
ATAGCCAAAAGCAAAGTTTG+AGG | 0.580224 | 3.4:+10291746 | None:intergenic |
TGGCAATGTCACGTTCATGC+CGG | 0.582971 | 3.4:+10288893 | None:intergenic |
GCTTTGGCCCAACTCTTCGC+CGG | 0.583717 | 3.4:+10288994 | None:intergenic |
GGTGTTACCTGAATCAAAGA+TGG | 0.585226 | 3.4:+10289274 | None:intergenic |
CAAACATGTGGTGCTGCCGG+CGG | 0.587029 | 3.4:+10288845 | None:intergenic |
CGAATGTGTAGCTAGGAACT+GGG | 0.588782 | 3.4:+10289627 | None:intergenic |
GCCCAATAGACCTTGTGGTG+GGG | 0.592501 | 3.4:+10289574 | None:intergenic |
ATCCTTATACATAGCACCGC+CGG | 0.592708 | 3.4:-10288861 | MS.gene039634:CDS |
AGCCGCCATGGCCAAACATG+TGG | 0.599850 | 3.4:+10288833 | None:intergenic |
ACACAACCGAATGTGTAGCT+AGG | 0.605985 | 3.4:+10289620 | None:intergenic |
GGCACCTCTGCCCCACCACA+AGG | 0.606822 | 3.4:-10289584 | MS.gene039634:CDS |
TGGCAAACAGTAAGAGAATG+TGG | 0.607273 | 3.4:+10289499 | None:intergenic |
GCCAAAAGCAAAGTTTGAGG+TGG | 0.608306 | 3.4:+10291749 | None:intergenic |
AAAGATGGTACCGGCTCCAG+TGG | 0.608353 | 3.4:+10289289 | None:intergenic |
AGTTGCACCGGCCTATGTGG+CGG | 0.609393 | 3.4:-10289030 | MS.gene039634:CDS |
TGCAATAGAGGAACTGCCAT+AGG | 0.614874 | 3.4:+10289688 | None:intergenic |
TGCGCCCGATAATGTGAACT+CGG | 0.616943 | 3.4:-10288811 | MS.gene039634:CDS |
ATGAGCTCACACCACAACTA+GGG | 0.616988 | 3.4:+10289726 | None:intergenic |
CAACCATCACAAGCAGTGCA+AGG | 0.621327 | 3.4:+10291695 | None:intergenic |
AAATGTGATGTCCAAGACAA+TGG | 0.621832 | 3.4:-10291992 | MS.gene039634:CDS |
CTCATCTCTGACCGCCACAT+AGG | 0.623937 | 3.4:+10289019 | None:intergenic |
ATGGCCTAAATGGGGAACAT+GGG | 0.626148 | 3.4:+10291939 | None:intergenic |
CTCACAGTGACATCCCTAGG+AGG | 0.629537 | 3.4:-10288972 | MS.gene039634:CDS |
GTAGCTAGGAACTGGGTCAG+TGG | 0.633103 | 3.4:+10289634 | None:intergenic |
TGCAACTAGCCGAGTAAACA+CGG | 0.637706 | 3.4:+10289046 | None:intergenic |
TTAAACGCCAATGCGGCTGG+AGG | 0.639061 | 3.4:+10289317 | None:intergenic |
GGAGAGGAATAGGAACAAGA+GGG | 0.641689 | 3.4:+10292036 | None:intergenic |
TCACAGTGACATCCCTAGGA+GGG | 0.649521 | 3.4:-10288971 | MS.gene039634:CDS |
AAGCCCAATAGACCTTGTGG+TGG | 0.649872 | 3.4:+10289572 | None:intergenic |
TCTAGGGTTCTTGAGAAGAG+GGG | 0.652701 | 3.4:+10289403 | None:intergenic |
TGGCTTTGATGGCCTAAATG+GGG | 0.655766 | 3.4:+10291931 | None:intergenic |
CCCAAGCCCAATAGACCTTG+TGG | 0.661432 | 3.4:+10289569 | None:intergenic |
GTTTGAGACAAAAGTGACAA+CGG | 0.666616 | 3.4:+10289539 | None:intergenic |
TGTATAAGGATGTTGTCTTG+TGG | 0.694390 | 3.4:+10288873 | None:intergenic |
TAGGGACATCAATGAGCACA+CGG | 0.705781 | 3.4:+10288751 | None:intergenic |
GGTCGGATTAAACGCCAATG+CGG | 0.727963 | 3.4:+10289310 | None:intergenic |
GGACATCAATGAGCACACGG+TGG | 0.780138 | 3.4:+10288754 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!!! | AAGTATTTTAGTAATTTTTA+GGG | + | chr3.4:10290129-10290148 | None:intergenic | 10.0% |
!! | AAAAATGTTTATGAAGAAAA+AGG | + | chr3.4:10289532-10289551 | None:intergenic | 15.0% |
!! | AAGTTGTTTATAAATGTAAT+AGG | - | chr3.4:10290316-10290335 | MS.gene039634:intron | 15.0% |
!! | AATTATTAGAATAAATACCT+TGG | + | chr3.4:10289580-10289599 | None:intergenic | 15.0% |
!! | ATTACTAATTTCAAAATGAA+AGG | - | chr3.4:10290481-10290500 | MS.gene039634:intron | 15.0% |
!! | CTAAAAATTACTAAAATACT+TGG | - | chr3.4:10290128-10290147 | MS.gene039634:intron | 15.0% |
!! | TTACTAATTTCAAAATGAAA+GGG | - | chr3.4:10290482-10290501 | MS.gene039634:intron | 15.0% |
!!! | AAATGTTTTAAAATTGAGAT+AGG | + | chr3.4:10290932-10290951 | None:intergenic | 15.0% |
!!! | AACAAAACATTTTTTTTTTG+AGG | + | chr3.4:10289655-10289674 | None:intergenic | 15.0% |
!!! | AACTCAGATTTTTTAAATTA+GGG | + | chr3.4:10289456-10289475 | None:intergenic | 15.0% |
!!! | AAGCAATTTTTATATTGTTT+GGG | - | chr3.4:10290215-10290234 | MS.gene039634:intron | 15.0% |
!!! | AATTAAATTCTTCAAGTTAA+TGG | - | chr3.4:10290089-10290108 | MS.gene039634:intron | 15.0% |
!!! | ACAAAACATTTTTTTTTTGA+GGG | + | chr3.4:10289654-10289673 | None:intergenic | 15.0% |
!!! | ACTAATAGTATATTTTTATG+TGG | + | chr3.4:10291530-10291549 | None:intergenic | 15.0% |
!!! | ATTAACTTGAAGAATTTAAT+TGG | + | chr3.4:10290090-10290109 | None:intergenic | 15.0% |
!!! | ATTTTGTTTCATTTAAACAT+TGG | - | chr3.4:10290971-10290990 | MS.gene039634:intron | 15.0% |
!!! | CAAGTATTTTAGTAATTTTT+AGG | + | chr3.4:10290130-10290149 | None:intergenic | 15.0% |
!!! | CTAATAGTATATTTTTATGT+GGG | + | chr3.4:10291529-10291548 | None:intergenic | 15.0% |
!!! | TAAGCAATTTTTATATTGTT+TGG | - | chr3.4:10290214-10290233 | MS.gene039634:intron | 15.0% |
!!! | TAGTGATTCAATAATTTTAT+TGG | + | chr3.4:10290047-10290066 | None:intergenic | 15.0% |
!!! | TTCTTCATAAACATTTTTTT+CGG | - | chr3.4:10289534-10289553 | MS.gene039634:CDS | 15.0% |
!!! | TTTATTTTGTTTCATTTTTC+AGG | - | chr3.4:10291009-10291028 | MS.gene039634:intron | 15.0% |
!!! | TTTTTGTTAAAAAATTACGA+AGG | - | chr3.4:10289294-10289313 | MS.gene039634:CDS | 15.0% |
!! | AAAGAATCATGATATGATTA+TGG | + | chr3.4:10291672-10291691 | None:intergenic | 20.0% |
!! | ATATATTGTTAAACATTACC+AGG | - | chr3.4:10291694-10291713 | MS.gene039634:CDS | 20.0% |
!! | ATCACTATATTATGTTAACT+TGG | - | chr3.4:10291390-10291409 | MS.gene039634:intron | 20.0% |
!! | GAATAAACCAACTTATTAAT+CGG | + | chr3.4:10290738-10290757 | None:intergenic | 20.0% |
!! | TGTAATCATGGTTTAAAAAT+TGG | - | chr3.4:10290681-10290700 | MS.gene039634:intron | 20.0% |
!! | TTATTAAATCACAACAATTG+TGG | - | chr3.4:10289714-10289733 | MS.gene039634:CDS | 20.0% |
!!! | AATATTTTGGATTCATAGAT+TGG | + | chr3.4:10290580-10290599 | None:intergenic | 20.0% |
!!! | CAACTCAGATTTTTTAAATT+AGG | + | chr3.4:10289457-10289476 | None:intergenic | 20.0% |
!!! | GGTTTATTTTGGTTTAATAA+CGG | - | chr3.4:10290856-10290875 | MS.gene039634:intron | 20.0% |
!!! | TTAAATGTAGTTGATTTTTC+AGG | + | chr3.4:10289115-10289134 | None:intergenic | 20.0% |
!!! | TTGTTTTCGTGTTTTTATAT+TGG | - | chr3.4:10289214-10289233 | MS.gene039634:intron | 20.0% |
!!! | TTTTGTCCCATTATTATTAT+AGG | - | chr3.4:10290545-10290564 | MS.gene039634:intron | 20.0% |
! | AAAAAATAGATGTAAGAGCT+TGG | + | chr3.4:10289490-10289509 | None:intergenic | 25.0% |
! | AAAAAGACCGATTAATAAGT+TGG | - | chr3.4:10290728-10290747 | MS.gene039634:intron | 25.0% |
! | AAATAAACCAACCAATGTAT+TGG | + | chr3.4:10290845-10290864 | None:intergenic | 25.0% |
! | AATATAGTGATGATCTTCTA+GGG | + | chr3.4:10291381-10291400 | None:intergenic | 25.0% |
! | TAATATAGTGATGATCTTCT+AGG | + | chr3.4:10291382-10291401 | None:intergenic | 25.0% |
! | TCAAAAATTGACCAATACAT+TGG | - | chr3.4:10290831-10290850 | MS.gene039634:intron | 25.0% |
! | TTAAACCATGATTACATCAT+TGG | + | chr3.4:10290677-10290696 | None:intergenic | 25.0% |
! | TTATATGCAATATCTATTCC+TGG | - | chr3.4:10289606-10289625 | MS.gene039634:CDS | 25.0% |
! | TTATTGTAGGTACAACTATT+GGG | + | chr3.4:10291840-10291859 | None:intergenic | 25.0% |
!! | TTTTTCCAATGATGTAATCA+TGG | - | chr3.4:10290669-10290688 | MS.gene039634:intron | 25.0% |
!!! | AAAAGAATGGTTCTAAATTG+TGG | - | chr3.4:10289370-10289389 | MS.gene039634:CDS | 25.0% |
!!! | AATGAGTTATTTTTACTCCA+AGG | - | chr3.4:10289560-10289579 | MS.gene039634:CDS | 25.0% |
!!! | AATGGTGAAAGATTTGTTTT+GGG | - | chr3.4:10290017-10290036 | MS.gene039634:intron | 25.0% |
!!! | ATACATTGGTTGGTTTATTT+TGG | - | chr3.4:10290845-10290864 | MS.gene039634:intron | 25.0% |
!!! | TCTATGACTAACCTATTTTT+TGG | + | chr3.4:10290354-10290373 | None:intergenic | 25.0% |
!!! | TTTTCGTGTTTTTATATTGG+CGG | - | chr3.4:10289217-10289236 | MS.gene039634:intron | 25.0% |
AAATTGACCAATACATTGGT+TGG | - | chr3.4:10290835-10290854 | MS.gene039634:intron | 30.0% | |
AACCCCACCTATAATAATAA+TGG | + | chr3.4:10290555-10290574 | None:intergenic | 30.0% | |
AAGTACTAGGAAGAAAAGAA+TGG | - | chr3.4:10289357-10289376 | MS.gene039634:CDS | 30.0% | |
AAGTTAAGAGACTTGAAACT+TGG | + | chr3.4:10291289-10291308 | None:intergenic | 30.0% | |
AATTAGTAATTACCCTTCCA+CGG | + | chr3.4:10290471-10290490 | None:intergenic | 30.0% | |
ACAATAACATTCATGTTCTC+CGG | - | chr3.4:10291853-10291872 | MS.gene039634:CDS | 30.0% | |
ACCCCACCTATAATAATAAT+GGG | + | chr3.4:10290554-10290573 | None:intergenic | 30.0% | |
CTAGTACTTGTTTAGATTTG+CGG | + | chr3.4:10289346-10289365 | None:intergenic | 30.0% | |
GACAAAATAACGAGTATCTT+TGG | + | chr3.4:10289869-10289888 | None:intergenic | 30.0% | |
GAGAACATGAATGTTATTGT+AGG | + | chr3.4:10291853-10291872 | None:intergenic | 30.0% | |
GAGACTTATCATGATTCAAT+TGG | + | chr3.4:10290896-10290915 | None:intergenic | 30.0% | |
GTCCCATTATTATTATAGGT+GGG | - | chr3.4:10290549-10290568 | MS.gene039634:intron | 30.0% | |
GTGTTTGAACTGATATACAA+TGG | - | chr3.4:10289999-10290018 | MS.gene039634:intron | 30.0% | |
GTTATTGTAGGTACAACTAT+TGG | + | chr3.4:10291841-10291860 | None:intergenic | 30.0% | |
GTTTAAAAATTGGATCGAAG+TGG | - | chr3.4:10290691-10290710 | MS.gene039634:intron | 30.0% | |
TACATTGTTAGGGCTAAAAT+TGG | - | chr3.4:10288989-10289008 | MS.gene039634:CDS | 30.0% | |
TCAAACAAAACATGAAAACC+AGG | + | chr3.4:10289627-10289646 | None:intergenic | 30.0% | |
TCCCATTATTATTATAGGTG+GGG | - | chr3.4:10290550-10290569 | MS.gene039634:intron | 30.0% | |
TGTCCCATTATTATTATAGG+TGG | - | chr3.4:10290548-10290567 | MS.gene039634:intron | 30.0% | |
TTTGTACATTGTGACATTTG+AGG | + | chr3.4:10289934-10289953 | None:intergenic | 30.0% | |
! | ACTTCAATTCCTTGATAGTT+TGG | - | chr3.4:10288907-10288926 | MS.gene039634:CDS | 30.0% |
! | ATGTTAACTTGGAAGCAATT+AGG | - | chr3.4:10291401-10291420 | MS.gene039634:intron | 30.0% |
! | GCACATAGCTTTCAATATTT+TGG | + | chr3.4:10290593-10290612 | None:intergenic | 30.0% |
! | TGTTAACTTGGAAGCAATTA+GGG | - | chr3.4:10291402-10291421 | MS.gene039634:intron | 30.0% |
!! | ATAAGTTGGTTTATTCTCGA+TGG | - | chr3.4:10290742-10290761 | MS.gene039634:intron | 30.0% |
!! | CAATGGTGAAAGATTTGTTT+TGG | - | chr3.4:10290016-10290035 | MS.gene039634:intron | 30.0% |
!! | GTATATTTTTATGTGGGAGT+AGG | + | chr3.4:10291523-10291542 | None:intergenic | 30.0% |
!!! | ATGGTGAAAGATTTGTTTTG+GGG | - | chr3.4:10290018-10290037 | MS.gene039634:intron | 30.0% |
!!! | TTTTTTACCTGTTTGCATTC+AGG | + | chr3.4:10289157-10289176 | None:intergenic | 30.0% |
AAAAATTGGATCGAAGTGGT+CGG | - | chr3.4:10290695-10290714 | MS.gene039634:intron | 35.0% | |
AAATGTGATGTCCAAGACAA+TGG | - | chr3.4:10288773-10288792 | MS.gene039634:CDS | 35.0% | |
AGAGTCCAACTTACATTGTT+AGG | - | chr3.4:10288978-10288997 | MS.gene039634:CDS | 35.0% | |
ATACTAGTAATGATGCTGCT+TGG | - | chr3.4:10289044-10289063 | MS.gene039634:CDS | 35.0% | |
ATAGCCAAAAGCAAAGTTTG+AGG | + | chr3.4:10289022-10289041 | None:intergenic | 35.0% | |
ATTGTCTTGGACATCACATT+TGG | + | chr3.4:10288774-10288793 | None:intergenic | 35.0% | |
ATTTGTCTACCAGAAGCAAT+AGG | + | chr3.4:10288953-10288972 | None:intergenic | 35.0% | |
CGCAAATCTAAACAAGTACT+AGG | - | chr3.4:10289344-10289363 | MS.gene039634:CDS | 35.0% | |
GAGATGCTGTACCAAAAAAT+AGG | - | chr3.4:10290340-10290359 | MS.gene039634:intron | 35.0% | |
GAGTCCAACTTACATTGTTA+GGG | - | chr3.4:10288979-10288998 | MS.gene039634:CDS | 35.0% | |
TAGATTGAACTGAGTCGAAT+AGG | - | chr3.4:10290784-10290803 | MS.gene039634:intron | 35.0% | |
TCAAGTCTCTTAACTTCTCT+GGG | - | chr3.4:10291293-10291312 | MS.gene039634:intron | 35.0% | |
TGCAATTTCAACCTAACCTA+TGG | - | chr3.4:10291061-10291080 | MS.gene039634:intron | 35.0% | |
TGTATAAGGATGTTGTCTTG+TGG | + | chr3.4:10291895-10291914 | None:intergenic | 35.0% | |
TTAGCCCTAACAATGTAAGT+TGG | + | chr3.4:10288986-10289005 | None:intergenic | 35.0% | |
TTATGTGGGAGTAGGTAAAA+GGG | + | chr3.4:10291515-10291534 | None:intergenic | 35.0% | |
TTCAAGTCTCTTAACTTCTC+TGG | - | chr3.4:10291292-10291311 | MS.gene039634:intron | 35.0% | |
TTGAAGTCTAGTTGTGTCTT+TGG | + | chr3.4:10288894-10288913 | None:intergenic | 35.0% | |
TTGTCTTGGACATCACATTT+GGG | + | chr3.4:10288773-10288792 | None:intergenic | 35.0% | |
TTTATGTGGGAGTAGGTAAA+AGG | + | chr3.4:10291516-10291535 | None:intergenic | 35.0% | |
! | GTTTGAGACAAAAGTGACAA+CGG | + | chr3.4:10291229-10291248 | None:intergenic | 35.0% |
! | TTCTAGCTACCAAACTATCA+AGG | + | chr3.4:10288919-10288938 | None:intergenic | 35.0% |
! | TTTGAGACAAAAGTGACAAC+GGG | + | chr3.4:10291228-10291247 | None:intergenic | 35.0% |
!! | ATGGTTCTAAATTGTGGTTG+TGG | - | chr3.4:10289376-10289395 | MS.gene039634:CDS | 35.0% |
!! | TCAAACTTTGCTTTTGGCTA+TGG | - | chr3.4:10289021-10289040 | MS.gene039634:CDS | 35.0% |
AACACCGAGTTCACATTATC+GGG | + | chr3.4:10291961-10291980 | None:intergenic | 40.0% | |
AACTTGGAAGCAATTAGGGT+TGG | - | chr3.4:10291406-10291425 | MS.gene039634:intron | 40.0% | |
ACACTTTCTTCCCATGAAAG+TGG | + | chr3.4:10288857-10288876 | None:intergenic | 40.0% | |
ACCTGAATCAAAGATGGTAC+CGG | + | chr3.4:10291488-10291507 | None:intergenic | 40.0% | |
AGTTCACATGACATACAGCT+TGG | - | chr3.4:10290422-10290441 | MS.gene039634:intron | 40.0% | |
ATCGAAGTGGTCGGATTAAT+CGG | - | chr3.4:10290704-10290723 | MS.gene039634:intron | 40.0% | |
CAACACCGAGTTCACATTAT+CGG | + | chr3.4:10291962-10291981 | None:intergenic | 40.0% | |
CATTGATGTCCCTAACTCTA+GGG | - | chr3.4:10292023-10292042 | MS.gene039634:CDS | 40.0% | |
GAGGAATATCAACGACTTTC+CGG | + | chr3.4:10291432-10291451 | None:intergenic | 40.0% | |
GGCTAAAAACATGGATCACT+TGG | + | chr3.4:10288808-10288827 | None:intergenic | 40.0% | |
GGGGTATACTTAATCCTCTT+GGG | + | chr3.4:10291346-10291365 | None:intergenic | 40.0% | |
GGTTGTGTTTCAAAAACCAC+AGG | - | chr3.4:10291160-10291179 | MS.gene039634:intron | 40.0% | |
TACCAAGTTAGCTGCAATAG+AGG | + | chr3.4:10291092-10291111 | None:intergenic | 40.0% | |
TCAGTTGTACCTATTGCTTC+TGG | - | chr3.4:10288941-10288960 | MS.gene039634:CDS | 40.0% | |
TCATTGATGTCCCTAACTCT+AGG | - | chr3.4:10292022-10292041 | MS.gene039634:CDS | 40.0% | |
TCGCAAAGTTAACTAGCTAG+TGG | - | chr3.4:10289683-10289702 | MS.gene039634:CDS | 40.0% | |
TGAAAGCTATGTGCTCTCTA+TGG | - | chr3.4:10290599-10290618 | MS.gene039634:intron | 40.0% | |
TGGCAAACAGTAAGAGAATG+TGG | + | chr3.4:10291269-10291288 | None:intergenic | 40.0% | |
TGTCTTGGACATCACATTTG+GGG | + | chr3.4:10288772-10288791 | None:intergenic | 40.0% | |
TTCCTCTATTGCAGCTAACT+TGG | - | chr3.4:10291087-10291106 | MS.gene039634:intron | 40.0% | |
! | AAGAGAATGTGGACTGATAG+AGG | + | chr3.4:10291258-10291277 | None:intergenic | 40.0% |
! | AGGGGTATACTTAATCCTCT+TGG | + | chr3.4:10291347-10291366 | None:intergenic | 40.0% |
! | GGTGTTACCTGAATCAAAGA+TGG | + | chr3.4:10291494-10291513 | None:intergenic | 40.0% |
! | TCCACCTCAAACTTTGCTTT+TGG | - | chr3.4:10289015-10289034 | MS.gene039634:CDS | 40.0% |
! | TCTTTTACCTTTACTTGCCG+TGG | - | chr3.4:10290451-10290470 | MS.gene039634:intron | 40.0% |
!! | ATGTGGACTGATAGAGGTTT+TGG | + | chr3.4:10291252-10291271 | None:intergenic | 40.0% |
!! | TGTGGACTGATAGAGGTTTT+GGG | + | chr3.4:10291251-10291270 | None:intergenic | 40.0% |
!! | TTCTAGGGTTCTTGAGAAGA+GGG | + | chr3.4:10291366-10291385 | None:intergenic | 40.0% |
ACACAACCGAATGTGTAGCT+AGG | + | chr3.4:10291148-10291167 | None:intergenic | 45.0% | |
ATCCTTATACATAGCACCGC+CGG | - | chr3.4:10291904-10291923 | MS.gene039634:CDS | 45.0% | |
ATGAGCTCACACCACAACTA+GGG | + | chr3.4:10291042-10291061 | None:intergenic | 45.0% | |
ATGGCCTAAATGGGGAACAT+GGG | + | chr3.4:10288829-10288848 | None:intergenic | 45.0% | |
ATTCCTTGCACTGCTTGTGA+TGG | - | chr3.4:10289067-10289086 | MS.gene039634:intron | 45.0% | |
CAACACCAACCCTAGAGTTA+GGG | + | chr3.4:10292035-10292054 | None:intergenic | 45.0% | |
CCAGTTCCTAGCTACACATT+CGG | - | chr3.4:10291139-10291158 | MS.gene039634:intron | 45.0% | |
CGAATGTGTAGCTAGGAACT+GGG | + | chr3.4:10291141-10291160 | None:intergenic | 45.0% | |
GCCAAAAGCAAAGTTTGAGG+TGG | + | chr3.4:10289019-10289038 | None:intergenic | 45.0% | |
GGAGAGGAATAGGAACAAGA+GGG | + | chr3.4:10288732-10288751 | None:intergenic | 45.0% | |
TACCTTTACTTGCCGTGGAA+GGG | - | chr3.4:10290456-10290475 | MS.gene039634:intron | 45.0% | |
TAGAGGAACTGCCATAGGTT+AGG | + | chr3.4:10291075-10291094 | None:intergenic | 45.0% | |
TAGGGACATCAATGAGCACA+CGG | + | chr3.4:10292017-10292036 | None:intergenic | 45.0% | |
TGCAACTAGCCGAGTAAACA+CGG | + | chr3.4:10291722-10291741 | None:intergenic | 45.0% | |
TGCAATAGAGGAACTGCCAT+AGG | + | chr3.4:10291080-10291099 | None:intergenic | 45.0% | |
TTACCTTTACTTGCCGTGGA+AGG | - | chr3.4:10290455-10290474 | MS.gene039634:intron | 45.0% | |
TTAGCCCATGTTCCCCATTT+AGG | - | chr3.4:10288822-10288841 | MS.gene039634:CDS | 45.0% | |
! | CACATTTGGGGTTTAGTCCT+TGG | + | chr3.4:10288760-10288779 | None:intergenic | 45.0% |
! | GCCATCAAAGCCACTTTCAT+GGG | - | chr3.4:10288844-10288863 | MS.gene039634:CDS | 45.0% |
! | GGGAACATGGGCTAAAAACA+TGG | + | chr3.4:10288817-10288836 | None:intergenic | 45.0% |
! | TACCAGGTACCGTGTTTACT+CGG | - | chr3.4:10291710-10291729 | MS.gene039634:CDS | 45.0% |
! | TCTAGGGTTCTTGAGAAGAG+GGG | + | chr3.4:10291365-10291384 | None:intergenic | 45.0% |
!! | AGTGGCTTTGATGGCCTAAA+TGG | + | chr3.4:10288839-10288858 | None:intergenic | 45.0% |
!! | CTTCTAGGGTTCTTGAGAAG+AGG | + | chr3.4:10291367-10291386 | None:intergenic | 45.0% |
!! | GTGGCTTTGATGGCCTAAAT+GGG | + | chr3.4:10288838-10288857 | None:intergenic | 45.0% |
!! | TCCCATGAAAGTGGCTTTGA+TGG | + | chr3.4:10288848-10288867 | None:intergenic | 45.0% |
!! | TCTCTGGGTCTTTGAGACTT+GGG | - | chr3.4:10291308-10291327 | MS.gene039634:intron | 45.0% |
!! | TGGCTTTGATGGCCTAAATG+GGG | + | chr3.4:10288837-10288856 | None:intergenic | 45.0% |
!! | TTCTCTGGGTCTTTGAGACT+TGG | - | chr3.4:10291307-10291326 | MS.gene039634:intron | 45.0% |
!! | TTGTGTCTTTGGCTTGCATC+TGG | + | chr3.4:10288883-10288902 | None:intergenic | 45.0% |
!!! | GTGGTTTTGTTGCTGCATGT+TGG | + | chr3.4:10291995-10292014 | None:intergenic | 45.0% |
!!! | ATTCTTTTAAATTTTAAAAT+AGG | + | chr3.4:10289904-10289923 | None:intergenic | 5.0% |
AAGCCCAATAGACCTTGTGG+TGG | + | chr3.4:10291196-10291215 | None:intergenic | 50.0% | |
AAGCTCACAGTGACATCCCT+AGG | - | chr3.4:10291790-10291809 | MS.gene039634:CDS | 50.0% | |
ACCACAAGGTCTATTGGGCT+TGG | - | chr3.4:10291195-10291214 | MS.gene039634:intron | 50.0% | |
AGCATGTGTCAAACCCTCCT+AGG | + | chr3.4:10291810-10291829 | None:intergenic | 50.0% | |
AGCCCAATAGACCTTGTGGT+GGG | + | chr3.4:10291195-10291214 | None:intergenic | 50.0% | |
AGCTATGTGCTCTCTATGGC+AGG | - | chr3.4:10290603-10290622 | MS.gene039634:intron | 50.0% | |
AGGCAAAGGTTCACGAGACT+TGG | - | chr3.4:10290623-10290642 | MS.gene039634:intron | 50.0% | |
AGGGATGTCACTGTGAGCTT+TGG | + | chr3.4:10291790-10291809 | None:intergenic | 50.0% | |
ATGAGTTCCGGCGAAGAGTT+GGG | - | chr3.4:10291764-10291783 | MS.gene039634:CDS | 50.0% | |
CAACCATCACAAGCAGTGCA+AGG | + | chr3.4:10289073-10289092 | None:intergenic | 50.0% | |
CAGGTACCTAACCCTAGTTG+TGG | - | chr3.4:10291028-10291047 | MS.gene039634:intron | 50.0% | |
CATGAGCTCACACCACAACT+AGG | + | chr3.4:10291043-10291062 | None:intergenic | 50.0% | |
CCACAAGGTCTATTGGGCTT+GGG | - | chr3.4:10291196-10291215 | MS.gene039634:intron | 50.0% | |
CCGAATGTGTAGCTAGGAAC+TGG | + | chr3.4:10291142-10291161 | None:intergenic | 50.0% | |
CTATTCCTCTCCCTAGTCCA+AGG | - | chr3.4:10288740-10288759 | MS.gene039634:CDS | 50.0% | |
CTCACACCACAACTAGGGTT+AGG | + | chr3.4:10291037-10291056 | None:intergenic | 50.0% | |
GATGGCCTAAATGGGGAACA+TGG | + | chr3.4:10288830-10288849 | None:intergenic | 50.0% | |
GCAACACCAACCCTAGAGTT+AGG | + | chr3.4:10292036-10292055 | None:intergenic | 50.0% | |
GCATGTGTCAAACCCTCCTA+GGG | + | chr3.4:10291809-10291828 | None:intergenic | 50.0% | |
GCCGGTACCATCTTTGATTC+AGG | - | chr3.4:10291484-10291503 | MS.gene039634:intron | 50.0% | |
GGGAGAGGAATAGGAACAAG+AGG | + | chr3.4:10288733-10288752 | None:intergenic | 50.0% | |
GGGGTTTAGTCCTTGGACTA+GGG | + | chr3.4:10288753-10288772 | None:intergenic | 50.0% | |
GGTCGGATTAAACGCCAATG+CGG | + | chr3.4:10291458-10291477 | None:intergenic | 50.0% | |
TACCCTTCCACGGCAAGTAA+AGG | + | chr3.4:10290461-10290480 | None:intergenic | 50.0% | |
TCACAGTGACATCCCTAGGA+GGG | - | chr3.4:10291794-10291813 | MS.gene039634:CDS | 50.0% | |
TGATATTCCTCCAGCCGCAT+TGG | - | chr3.4:10291441-10291460 | MS.gene039634:intron | 50.0% | |
TGCGCCCGATAATGTGAACT+CGG | - | chr3.4:10291954-10291973 | MS.gene039634:CDS | 50.0% | |
TGCTGCTCCTGAATGCAAAC+AGG | - | chr3.4:10289147-10289166 | MS.gene039634:intron | 50.0% | |
TGGCAATGTCACGTTCATGC+CGG | + | chr3.4:10291875-10291894 | None:intergenic | 50.0% | |
TGGGGTTTAGTCCTTGGACT+AGG | + | chr3.4:10288754-10288773 | None:intergenic | 50.0% | |
TTGGCGTTTAATCCGACCAC+TGG | - | chr3.4:10291460-10291479 | MS.gene039634:intron | 50.0% | |
TTTAATCCGACCACTGGAGC+CGG | - | chr3.4:10291466-10291485 | MS.gene039634:intron | 50.0% | |
! | CTTGGACTAGGGAGAGGAAT+AGG | + | chr3.4:10288742-10288761 | None:intergenic | 50.0% |
! | GGCCATCAAAGCCACTTTCA+TGG | - | chr3.4:10288843-10288862 | MS.gene039634:CDS | 50.0% |
! | GTTTACTCGGCTAGTTGCAC+CGG | - | chr3.4:10291723-10291742 | MS.gene039634:CDS | 50.0% |
! | TGGAAGCAATTAGGGTTGGC+CGG | - | chr3.4:10291410-10291429 | MS.gene039634:intron | 50.0% |
! | TTAGTCCTTGGACTAGGGAG+AGG | + | chr3.4:10288748-10288767 | None:intergenic | 50.0% |
!! | GATGTCCCTAACTCTAGGGT+TGG | - | chr3.4:10292027-10292046 | MS.gene039634:CDS | 50.0% |
!! | GGAGTGTTGAGCCATTGTCT+TGG | + | chr3.4:10288787-10288806 | None:intergenic | 50.0% |
!! | TGTCTTTGGCTTGCATCTGG+AGG | + | chr3.4:10288880-10288899 | None:intergenic | 50.0% |
AGCCGAGTAAACACGGTACC+TGG | + | chr3.4:10291715-10291734 | None:intergenic | 55.0% | |
AGGAACTGGGTCAGTGGCTA+AGG | + | chr3.4:10291128-10291147 | None:intergenic | 55.0% | |
ATCCTCTTGGGCTGAGCAAC+AGG | + | chr3.4:10291334-10291353 | None:intergenic | 55.0% | |
CACCACATGTTTGGCCATGG+CGG | - | chr3.4:10291930-10291949 | MS.gene039634:CDS | 55.0% | |
CAGCACCACATGTTTGGCCA+TGG | - | chr3.4:10291927-10291946 | MS.gene039634:CDS | 55.0% | |
CCCAAGCCCAATAGACCTTG+TGG | + | chr3.4:10291199-10291218 | None:intergenic | 55.0% | |
CTCACAGTGACATCCCTAGG+AGG | - | chr3.4:10291793-10291812 | MS.gene039634:CDS | 55.0% | |
CTCATCTCTGACCGCCACAT+AGG | + | chr3.4:10291749-10291768 | None:intergenic | 55.0% | |
GATGAGTTCCGGCGAAGAGT+TGG | - | chr3.4:10291763-10291782 | MS.gene039634:CDS | 55.0% | |
GCCCAATAGACCTTGTGGTG+GGG | + | chr3.4:10291194-10291213 | None:intergenic | 55.0% | |
GCCCCACCACAAGGTCTATT+GGG | - | chr3.4:10291190-10291209 | MS.gene039634:intron | 55.0% | |
GGACATCAATGAGCACACGG+TGG | + | chr3.4:10292014-10292033 | None:intergenic | 55.0% | |
GGATTAAACGCCAATGCGGC+TGG | + | chr3.4:10291454-10291473 | None:intergenic | 55.0% | |
GTAGCTAGGAACTGGGTCAG+TGG | + | chr3.4:10291134-10291153 | None:intergenic | 55.0% | |
GTGCTCTCTATGGCAGGCAA+AGG | - | chr3.4:10290609-10290628 | MS.gene039634:intron | 55.0% | |
TGCCCCACCACAAGGTCTAT+TGG | - | chr3.4:10291189-10291208 | MS.gene039634:intron | 55.0% | |
TGGCGGTCAGAGATGAGTTC+CGG | - | chr3.4:10291752-10291771 | MS.gene039634:CDS | 55.0% | |
TTAAACGCCAATGCGGCTGG+AGG | + | chr3.4:10291451-10291470 | None:intergenic | 55.0% | |
!! | AAAGATGGTACCGGCTCCAG+TGG | + | chr3.4:10291479-10291498 | None:intergenic | 55.0% |
!! | TGCCGGCGGTGCTATGTATA+AGG | + | chr3.4:10291909-10291928 | None:intergenic | 55.0% |
AGCCGCCATGGCCAAACATG+TGG | + | chr3.4:10291935-10291954 | None:intergenic | 60.0% | |
GCTTTGGCCCAACTCTTCGC+CGG | + | chr3.4:10291774-10291793 | None:intergenic | 60.0% | |
GGTCTATTGGGCTTGGGTCG+AGG | - | chr3.4:10291202-10291221 | MS.gene039634:intron | 60.0% | |
TCTCTGACCGCCACATAGGC+CGG | + | chr3.4:10291745-10291764 | None:intergenic | 60.0% | |
! | AGTTGCACCGGCCTATGTGG+CGG | - | chr3.4:10291735-10291754 | MS.gene039634:CDS | 60.0% |
! | GCTAGTTGCACCGGCCTATG+TGG | - | chr3.4:10291732-10291751 | MS.gene039634:CDS | 60.0% |
! | TAGACCTTGTGGTGGGGCAG+AGG | + | chr3.4:10291188-10291207 | None:intergenic | 60.0% |
!! | ATGGTACCGGCTCCAGTGGT+CGG | + | chr3.4:10291475-10291494 | None:intergenic | 60.0% |
!! | CAAACATGTGGTGCTGCCGG+CGG | + | chr3.4:10291923-10291942 | None:intergenic | 60.0% |
!! | GGCCAAACATGTGGTGCTGC+CGG | + | chr3.4:10291926-10291945 | None:intergenic | 60.0% |
ATTATCGGGCGCAGCCGCCA+TGG | + | chr3.4:10291947-10291966 | None:intergenic | 65.0% | |
CGCCGGCAGCACCACATGTT+TGG | - | chr3.4:10291921-10291940 | MS.gene039634:CDS | 65.0% | |
GGCCTGTTGCTCAGCCCAAG+AGG | - | chr3.4:10291329-10291348 | MS.gene039634:intron | 65.0% | |
GGCACCTCTGCCCCACCACA+AGG | - | chr3.4:10291181-10291200 | MS.gene039634:intron | 70.0% | |
!! | TGGTGGGGCAGAGGTGCCTG+TGG | + | chr3.4:10291179-10291198 | None:intergenic | 70.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.4 | gene | 10288713 | 10292074 | 10288713 | ID=MS.gene039634 |
chr3.4 | mRNA | 10288713 | 10292074 | 10288713 | ID=MS.gene039634.t1;Parent=MS.gene039634 |
chr3.4 | exon | 10291619 | 10292074 | 10291619 | ID=MS.gene039634.t1.exon1;Parent=MS.gene039634.t1 |
chr3.4 | CDS | 10291619 | 10292074 | 10291619 | ID=cds.MS.gene039634.t1;Parent=MS.gene039634.t1 |
chr3.4 | exon | 10289282 | 10289756 | 10289282 | ID=MS.gene039634.t1.exon2;Parent=MS.gene039634.t1 |
chr3.4 | CDS | 10289282 | 10289756 | 10289282 | ID=cds.MS.gene039634.t1;Parent=MS.gene039634.t1 |
chr3.4 | exon | 10288713 | 10289071 | 10288713 | ID=MS.gene039634.t1.exon3;Parent=MS.gene039634.t1 |
chr3.4 | CDS | 10288713 | 10289071 | 10288713 | ID=cds.MS.gene039634.t1;Parent=MS.gene039634.t1 |
Gene Sequence |
Protein sequence |