Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039953.t1 | XP_003601058.1 | 94.1 | 354 | 21 | 0 | 1 | 354 | 10 | 363 | 3.60E-182 | 647.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039953.t1 | Q9SUF1 | 57.3 | 354 | 140 | 4 | 1 | 351 | 8 | 353 | 7.7e-109 | 395.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039953.t1 | G7J316 | 94.1 | 354 | 21 | 0 | 1 | 354 | 10 | 363 | 2.6e-182 | 647.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene018547 | MS.gene039953 | PPI |
| MS.gene061906 | MS.gene039953 | PPI |
| MS.gene64506 | MS.gene039953 | PPI |
| MS.gene09837 | MS.gene039953 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039953.t1 | MTR_3g072530 | 94.068 | 354 | 21 | 0 | 1 | 354 | 10 | 363 | 0.0 | 685 |
| MS.gene039953.t1 | MTR_3g072530 | 83.624 | 287 | 13 | 1 | 1 | 253 | 10 | 296 | 5.41e-170 | 476 |
| MS.gene039953.t1 | MTR_3g072560 | 63.636 | 352 | 122 | 4 | 2 | 353 | 15 | 360 | 2.55e-163 | 462 |
| MS.gene039953.t1 | MTR_3g072500 | 50.427 | 351 | 165 | 3 | 3 | 351 | 18 | 361 | 2.81e-128 | 373 |
| MS.gene039953.t1 | MTR_1g030580 | 52.161 | 347 | 157 | 3 | 3 | 349 | 14 | 351 | 1.55e-125 | 365 |
| MS.gene039953.t1 | MTR_1g030600 | 52.601 | 346 | 160 | 3 | 7 | 350 | 20 | 363 | 1.39e-123 | 361 |
| MS.gene039953.t1 | MTR_3g072520 | 52.078 | 361 | 154 | 5 | 3 | 351 | 7 | 360 | 1.07e-122 | 358 |
| MS.gene039953.t1 | MTR_0096s0100 | 50.289 | 346 | 157 | 4 | 7 | 349 | 20 | 353 | 1.94e-117 | 344 |
| MS.gene039953.t1 | MTR_1g068630 | 48.071 | 337 | 170 | 3 | 3 | 338 | 13 | 345 | 3.27e-117 | 344 |
| MS.gene039953.t1 | MTR_7g100050 | 46.491 | 342 | 174 | 3 | 6 | 343 | 14 | 350 | 2.88e-115 | 339 |
| MS.gene039953.t1 | MTR_8g041390 | 43.220 | 354 | 192 | 4 | 7 | 353 | 15 | 366 | 1.48e-104 | 313 |
| MS.gene039953.t1 | MTR_3g012420 | 44.838 | 339 | 178 | 4 | 3 | 334 | 15 | 351 | 1.77e-102 | 307 |
| MS.gene039953.t1 | MTR_3g072500 | 50.189 | 265 | 123 | 3 | 89 | 351 | 1 | 258 | 3.29e-92 | 278 |
| MS.gene039953.t1 | MTR_3g072500 | 47.826 | 253 | 128 | 2 | 3 | 253 | 18 | 268 | 2.71e-84 | 257 |
| MS.gene039953.t1 | MTR_1g074070 | 39.210 | 329 | 193 | 3 | 3 | 329 | 14 | 337 | 1.05e-81 | 253 |
| MS.gene039953.t1 | MTR_1g074160 | 39.198 | 324 | 194 | 2 | 6 | 329 | 14 | 334 | 1.73e-81 | 252 |
| MS.gene039953.t1 | MTR_1g051120 | 37.920 | 327 | 202 | 1 | 3 | 329 | 14 | 339 | 5.31e-79 | 246 |
| MS.gene039953.t1 | MTR_1g074120 | 37.463 | 339 | 209 | 2 | 6 | 344 | 17 | 352 | 1.72e-78 | 244 |
| MS.gene039953.t1 | MTR_3g112480 | 40.361 | 332 | 175 | 4 | 11 | 325 | 26 | 351 | 8.67e-77 | 241 |
| MS.gene039953.t1 | MTR_1g070175 | 36.565 | 361 | 203 | 6 | 3 | 353 | 14 | 358 | 3.27e-76 | 239 |
| MS.gene039953.t1 | MTR_1g074020 | 38.037 | 326 | 195 | 3 | 6 | 329 | 14 | 334 | 4.59e-76 | 238 |
| MS.gene039953.t1 | MTR_1g073990 | 38.532 | 327 | 193 | 3 | 6 | 329 | 17 | 338 | 1.20e-75 | 237 |
| MS.gene039953.t1 | MTR_1g023180 | 37.941 | 340 | 185 | 4 | 7 | 325 | 23 | 357 | 3.86e-75 | 238 |
| MS.gene039953.t1 | MTR_3g095420 | 34.302 | 344 | 210 | 5 | 1 | 334 | 3 | 340 | 2.40e-71 | 226 |
| MS.gene039953.t1 | MTR_3g095460 | 35.045 | 331 | 206 | 3 | 6 | 331 | 6 | 332 | 3.30e-70 | 223 |
| MS.gene039953.t1 | MTR_6g081840 | 34.783 | 345 | 219 | 3 | 14 | 354 | 19 | 361 | 4.26e-70 | 223 |
| MS.gene039953.t1 | MTR_3g095450 | 35.347 | 331 | 206 | 4 | 1 | 325 | 1 | 329 | 1.33e-66 | 214 |
| MS.gene039953.t1 | MTR_4g094340 | 36.080 | 352 | 211 | 6 | 6 | 351 | 10 | 353 | 5.04e-66 | 213 |
| MS.gene039953.t1 | MTR_4g094340 | 36.080 | 352 | 211 | 6 | 6 | 351 | 28 | 371 | 8.02e-66 | 213 |
| MS.gene039953.t1 | MTR_6g036450 | 32.515 | 326 | 214 | 3 | 3 | 325 | 14 | 336 | 8.88e-66 | 212 |
| MS.gene039953.t1 | MTR_2g016710 | 35.362 | 345 | 213 | 3 | 6 | 347 | 9 | 346 | 5.96e-65 | 210 |
| MS.gene039953.t1 | MTR_8g092650 | 34.483 | 348 | 214 | 4 | 1 | 342 | 1 | 340 | 2.68e-64 | 208 |
| MS.gene039953.t1 | MTR_5g021160 | 34.795 | 342 | 210 | 4 | 3 | 336 | 5 | 341 | 3.65e-64 | 208 |
| MS.gene039953.t1 | MTR_3g072500 | 46.970 | 198 | 103 | 1 | 3 | 198 | 18 | 215 | 2.77e-63 | 201 |
| MS.gene039953.t1 | MTR_1g038560 | 33.642 | 324 | 204 | 4 | 6 | 325 | 4 | 320 | 2.55e-62 | 202 |
| MS.gene039953.t1 | MTR_7g111830 | 30.816 | 331 | 220 | 2 | 6 | 329 | 8 | 336 | 1.57e-58 | 194 |
| MS.gene039953.t1 | MTR_3g112480 | 38.246 | 285 | 153 | 4 | 58 | 325 | 18 | 296 | 1.87e-58 | 192 |
| MS.gene039953.t1 | MTR_2g007990 | 32.295 | 353 | 224 | 5 | 6 | 346 | 16 | 365 | 2.10e-58 | 194 |
| MS.gene039953.t1 | MTR_3g095440 | 34.940 | 332 | 206 | 6 | 1 | 325 | 1 | 329 | 2.27e-58 | 193 |
| MS.gene039953.t1 | MTR_1g114210 | 32.317 | 328 | 203 | 5 | 6 | 325 | 12 | 328 | 6.70e-58 | 191 |
| MS.gene039953.t1 | MTR_2g027030 | 33.048 | 351 | 223 | 4 | 6 | 353 | 13 | 354 | 2.39e-57 | 190 |
| MS.gene039953.t1 | MTR_3g090550 | 34.421 | 337 | 203 | 5 | 22 | 354 | 23 | 345 | 2.59e-57 | 190 |
| MS.gene039953.t1 | MTR_4g129650 | 32.011 | 353 | 220 | 9 | 6 | 349 | 9 | 350 | 4.33e-56 | 187 |
| MS.gene039953.t1 | MTR_2g007970 | 33.523 | 352 | 224 | 5 | 6 | 354 | 13 | 357 | 5.70e-56 | 187 |
| MS.gene039953.t1 | MTR_1g074160 | 37.247 | 247 | 152 | 2 | 6 | 252 | 14 | 257 | 4.95e-55 | 181 |
| MS.gene039953.t1 | MTR_2g007960 | 31.579 | 361 | 224 | 7 | 6 | 352 | 13 | 364 | 7.02e-55 | 185 |
| MS.gene039953.t1 | MTR_8g006010 | 31.412 | 347 | 230 | 3 | 6 | 349 | 11 | 352 | 2.02e-54 | 183 |
| MS.gene039953.t1 | MTR_8g006120 | 34.012 | 344 | 218 | 3 | 6 | 345 | 11 | 349 | 6.74e-54 | 182 |
| MS.gene039953.t1 | MTR_2g016710 | 36.545 | 301 | 181 | 3 | 6 | 303 | 9 | 302 | 8.26e-54 | 180 |
| MS.gene039953.t1 | MTR_1g052205 | 41.494 | 241 | 110 | 7 | 118 | 349 | 13 | 231 | 1.17e-53 | 177 |
| MS.gene039953.t1 | MTR_4g094340 | 34.354 | 294 | 180 | 5 | 64 | 351 | 1 | 287 | 1.95e-53 | 178 |
| MS.gene039953.t1 | MTR_5g034910 | 33.537 | 328 | 211 | 6 | 11 | 335 | 13 | 336 | 2.26e-53 | 179 |
| MS.gene039953.t1 | MTR_2g102340 | 30.982 | 326 | 205 | 3 | 9 | 325 | 16 | 330 | 9.30e-53 | 179 |
| MS.gene039953.t1 | MTR_2g065550 | 33.540 | 322 | 209 | 3 | 6 | 325 | 11 | 329 | 9.44e-53 | 179 |
| MS.gene039953.t1 | MTR_4g106720 | 32.432 | 296 | 196 | 3 | 31 | 325 | 38 | 330 | 1.30e-52 | 177 |
| MS.gene039953.t1 | MTR_2g007260 | 31.751 | 337 | 221 | 4 | 6 | 335 | 15 | 349 | 2.69e-51 | 176 |
| MS.gene039953.t1 | MTR_5g034990 | 34.675 | 323 | 199 | 4 | 6 | 325 | 15 | 328 | 2.94e-51 | 174 |
| MS.gene039953.t1 | MTR_1g030400 | 28.490 | 351 | 226 | 6 | 14 | 346 | 16 | 359 | 8.89e-50 | 171 |
| MS.gene039953.t1 | MTR_4g094342 | 32.188 | 320 | 210 | 3 | 6 | 320 | 14 | 331 | 1.98e-49 | 170 |
| MS.gene039953.t1 | MTR_5g034980 | 32.727 | 330 | 212 | 6 | 1 | 325 | 1 | 325 | 2.27e-49 | 169 |
| MS.gene039953.t1 | MTR_8g092650 | 34.694 | 245 | 146 | 4 | 104 | 342 | 26 | 262 | 1.45e-47 | 162 |
| MS.gene039953.t1 | MTR_1g014510 | 30.699 | 329 | 219 | 5 | 6 | 329 | 12 | 336 | 1.02e-46 | 165 |
| MS.gene039953.t1 | MTR_8g006090 | 32.295 | 353 | 228 | 6 | 6 | 352 | 12 | 359 | 1.20e-46 | 162 |
| MS.gene039953.t1 | MTR_5g021160 | 34.221 | 263 | 160 | 4 | 82 | 336 | 1 | 258 | 1.40e-46 | 160 |
| MS.gene039953.t1 | MTR_5g034930 | 30.747 | 348 | 231 | 6 | 3 | 345 | 4 | 346 | 1.45e-46 | 162 |
| MS.gene039953.t1 | MTR_5g025340 | 31.790 | 324 | 201 | 5 | 18 | 325 | 23 | 342 | 3.78e-46 | 162 |
| MS.gene039953.t1 | MTR_5g021160 | 34.766 | 256 | 157 | 3 | 3 | 253 | 5 | 255 | 1.26e-45 | 157 |
| MS.gene039953.t1 | MTR_0103s0090 | 34.219 | 301 | 183 | 5 | 31 | 325 | 37 | 328 | 3.67e-45 | 158 |
| MS.gene039953.t1 | MTR_3g019050 | 29.321 | 324 | 211 | 4 | 19 | 337 | 32 | 342 | 5.37e-45 | 159 |
| MS.gene039953.t1 | MTR_4g094360 | 28.042 | 378 | 233 | 6 | 6 | 354 | 15 | 382 | 6.92e-45 | 159 |
| MS.gene039953.t1 | MTR_5g025290 | 31.231 | 333 | 209 | 5 | 18 | 334 | 24 | 352 | 8.15e-45 | 158 |
| MS.gene039953.t1 | MTR_4g094362 | 29.012 | 324 | 226 | 2 | 4 | 325 | 13 | 334 | 1.37e-44 | 157 |
| MS.gene039953.t1 | MTR_5g025290 | 31.231 | 333 | 209 | 5 | 18 | 334 | 52 | 380 | 1.75e-44 | 158 |
| MS.gene039953.t1 | MTR_5g089390 | 29.393 | 313 | 214 | 3 | 13 | 325 | 22 | 327 | 4.06e-43 | 153 |
| MS.gene039953.t1 | MTR_5g025370 | 31.627 | 332 | 207 | 6 | 11 | 325 | 16 | 344 | 1.88e-42 | 152 |
| MS.gene039953.t1 | MTR_8g006050 | 33.106 | 293 | 178 | 4 | 36 | 325 | 25 | 302 | 2.80e-42 | 150 |
| MS.gene039953.t1 | MTR_4g094352 | 31.361 | 338 | 212 | 7 | 6 | 330 | 13 | 343 | 7.13e-42 | 150 |
| MS.gene039953.t1 | MTR_4g129650 | 33.333 | 237 | 145 | 6 | 104 | 336 | 3 | 230 | 1.18e-41 | 146 |
| MS.gene039953.t1 | MTR_3g095440 | 34.363 | 259 | 160 | 6 | 1 | 252 | 1 | 256 | 1.42e-41 | 146 |
| MS.gene039953.t1 | MTR_5g068790 | 27.988 | 343 | 230 | 5 | 19 | 354 | 32 | 364 | 1.64e-41 | 149 |
| MS.gene039953.t1 | MTR_5g025400 | 30.606 | 330 | 209 | 5 | 13 | 325 | 19 | 345 | 1.87e-41 | 149 |
| MS.gene039953.t1 | MTR_6g007743 | 30.650 | 323 | 204 | 7 | 22 | 337 | 30 | 339 | 2.85e-41 | 148 |
| MS.gene039953.t1 | MTR_3g112480 | 36.957 | 230 | 122 | 4 | 113 | 325 | 1 | 224 | 8.64e-41 | 144 |
| MS.gene039953.t1 | MTR_0103s0090 | 35.802 | 243 | 143 | 3 | 88 | 325 | 3 | 237 | 1.41e-40 | 144 |
| MS.gene039953.t1 | MTR_5g034970 | 33.028 | 327 | 190 | 7 | 11 | 330 | 13 | 317 | 1.91e-40 | 145 |
| MS.gene039953.t1 | MTR_4g094340 | 36.694 | 248 | 145 | 4 | 6 | 247 | 10 | 251 | 6.62e-40 | 142 |
| MS.gene039953.t1 | MTR_4g094340 | 36.694 | 248 | 145 | 4 | 6 | 247 | 28 | 269 | 8.17e-40 | 142 |
| MS.gene039953.t1 | MTR_5g025330 | 29.429 | 333 | 207 | 4 | 13 | 325 | 17 | 341 | 8.91e-40 | 148 |
| MS.gene039953.t1 | MTR_8g072350 | 29.254 | 335 | 216 | 6 | 17 | 334 | 20 | 350 | 2.44e-39 | 143 |
| MS.gene039953.t1 | MTR_5g069040 | 26.989 | 352 | 236 | 4 | 19 | 353 | 32 | 379 | 2.54e-39 | 144 |
| MS.gene039953.t1 | MTR_8g006090 | 33.696 | 276 | 173 | 5 | 82 | 352 | 9 | 279 | 1.67e-38 | 139 |
| MS.gene039953.t1 | MTR_6g007747 | 31.962 | 316 | 207 | 5 | 22 | 337 | 30 | 337 | 2.20e-38 | 140 |
| MS.gene039953.t1 | MTR_6g007750 | 31.230 | 317 | 206 | 6 | 26 | 337 | 33 | 342 | 5.63e-38 | 139 |
| MS.gene039953.t1 | MTR_1g051120 | 33.838 | 198 | 131 | 0 | 3 | 200 | 14 | 211 | 1.32e-37 | 136 |
| MS.gene039953.t1 | MTR_1g051120 | 34.184 | 196 | 129 | 0 | 3 | 198 | 14 | 209 | 1.69e-37 | 134 |
| MS.gene039953.t1 | MTR_4g094360 | 28.720 | 289 | 167 | 6 | 95 | 354 | 57 | 335 | 2.45e-37 | 137 |
| MS.gene039953.t1 | MTR_6g007760 | 28.477 | 302 | 210 | 5 | 6 | 305 | 12 | 309 | 1.50e-35 | 132 |
| MS.gene039953.t1 | MTR_8g006090 | 31.229 | 301 | 200 | 4 | 6 | 303 | 12 | 308 | 1.52e-35 | 132 |
| MS.gene039953.t1 | MTR_4g094360 | 28.155 | 309 | 201 | 4 | 6 | 303 | 15 | 313 | 3.79e-34 | 128 |
| MS.gene039953.t1 | MTR_6g007753 | 30.070 | 286 | 192 | 3 | 55 | 337 | 343 | 623 | 4.28e-33 | 130 |
| MS.gene039953.t1 | MTR_6g007753 | 28.829 | 222 | 153 | 2 | 116 | 337 | 83 | 299 | 7.27e-23 | 100 |
| MS.gene039953.t1 | MTR_6g007740 | 29.080 | 337 | 224 | 7 | 6 | 337 | 13 | 339 | 1.23e-32 | 127 |
| MS.gene039953.t1 | MTR_6g007757 | 32.248 | 307 | 197 | 6 | 22 | 325 | 30 | 328 | 2.49e-32 | 124 |
| MS.gene039953.t1 | MTR_5g034980 | 31.229 | 301 | 179 | 7 | 1 | 278 | 1 | 296 | 1.44e-31 | 121 |
| MS.gene039953.t1 | MTR_1g068720 | 41.304 | 138 | 78 | 3 | 196 | 331 | 93 | 229 | 9.49e-30 | 114 |
| MS.gene039953.t1 | MTR_4g100840 | 28.793 | 323 | 217 | 8 | 11 | 325 | 20 | 337 | 1.04e-29 | 117 |
| MS.gene039953.t1 | MTR_4g094340 | 36.139 | 202 | 119 | 3 | 6 | 201 | 28 | 225 | 8.32e-29 | 111 |
| MS.gene039953.t1 | MTR_2g102340 | 27.559 | 254 | 164 | 3 | 9 | 253 | 42 | 284 | 4.74e-28 | 112 |
| MS.gene039953.t1 | MTR_5g012650 | 28.000 | 325 | 222 | 7 | 11 | 329 | 14 | 332 | 5.26e-28 | 112 |
| MS.gene039953.t1 | MTR_8g006090 | 32.314 | 229 | 150 | 3 | 6 | 231 | 12 | 238 | 3.52e-24 | 100 |
| MS.gene039953.t1 | MTR_8g076800 | 36.765 | 136 | 70 | 4 | 160 | 288 | 137 | 263 | 8.83e-22 | 94.0 |
| MS.gene039953.t1 | MTR_4g094342 | 34.416 | 154 | 101 | 0 | 6 | 159 | 14 | 167 | 1.54e-20 | 90.1 |
| MS.gene039953.t1 | MTR_6g007757 | 29.694 | 229 | 150 | 6 | 22 | 247 | 30 | 250 | 3.59e-20 | 89.4 |
| MS.gene039953.t1 | MTR_6g007470 | 49.398 | 83 | 40 | 1 | 194 | 276 | 104 | 184 | 9.49e-20 | 87.0 |
| MS.gene039953.t1 | MTR_1g014790 | 36.290 | 124 | 75 | 2 | 78 | 198 | 36 | 158 | 3.01e-17 | 79.7 |
| MS.gene039953.t1 | MTR_8g006090 | 34.868 | 152 | 95 | 2 | 82 | 231 | 9 | 158 | 2.19e-16 | 77.4 |
| MS.gene039953.t1 | MTR_4g094348 | 30.952 | 126 | 78 | 2 | 90 | 206 | 7 | 132 | 3.14e-12 | 64.7 |
| MS.gene039953.t1 | MTR_3g093450 | 25.000 | 196 | 96 | 6 | 138 | 324 | 25 | 178 | 2.58e-11 | 62.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene039953.t1 | AT4G08290 | 57.627 | 354 | 139 | 5 | 1 | 351 | 8 | 353 | 1.06e-146 | 419 |
| MS.gene039953.t1 | AT1G44800 | 50.282 | 354 | 162 | 5 | 1 | 351 | 6 | 348 | 2.74e-123 | 360 |
| MS.gene039953.t1 | AT4G08300 | 50.139 | 359 | 160 | 4 | 1 | 353 | 6 | 351 | 4.15e-123 | 359 |
| MS.gene039953.t1 | AT1G21890 | 49.860 | 357 | 162 | 4 | 6 | 347 | 11 | 365 | 5.15e-121 | 354 |
| MS.gene039953.t1 | AT2G37460 | 46.957 | 345 | 178 | 3 | 1 | 344 | 10 | 350 | 3.15e-115 | 339 |
| MS.gene039953.t1 | AT2G39510 | 44.000 | 350 | 184 | 4 | 6 | 354 | 8 | 346 | 8.93e-107 | 318 |
| MS.gene039953.t1 | AT1G21890 | 50.163 | 307 | 142 | 2 | 6 | 303 | 11 | 315 | 9.19e-107 | 317 |
| MS.gene039953.t1 | AT4G08290 | 59.766 | 256 | 97 | 4 | 1 | 253 | 8 | 260 | 2.28e-106 | 313 |
| MS.gene039953.t1 | AT5G07050 | 44.545 | 330 | 173 | 3 | 4 | 325 | 16 | 343 | 6.40e-102 | 306 |
| MS.gene039953.t1 | AT2G40900 | 43.787 | 338 | 183 | 2 | 4 | 341 | 9 | 339 | 5.43e-101 | 303 |
| MS.gene039953.t1 | AT2G37450 | 44.380 | 347 | 167 | 4 | 1 | 346 | 4 | 325 | 7.73e-93 | 281 |
| MS.gene039953.t1 | AT3G56620 | 42.947 | 319 | 176 | 2 | 4 | 322 | 9 | 321 | 3.55e-91 | 278 |
| MS.gene039953.t1 | AT5G13670 | 38.739 | 333 | 199 | 4 | 3 | 332 | 5 | 335 | 1.11e-82 | 256 |
| MS.gene039953.t1 | AT2G37450 | 47.471 | 257 | 130 | 3 | 91 | 346 | 1 | 253 | 8.10e-76 | 234 |
| MS.gene039953.t1 | AT1G75500 | 38.037 | 326 | 193 | 3 | 7 | 325 | 21 | 344 | 4.66e-74 | 234 |
| MS.gene039953.t1 | AT1G75500 | 38.037 | 326 | 193 | 3 | 7 | 325 | 21 | 344 | 4.66e-74 | 234 |
| MS.gene039953.t1 | AT3G18200 | 34.857 | 350 | 218 | 6 | 8 | 353 | 37 | 380 | 2.28e-70 | 224 |
| MS.gene039953.t1 | AT5G64700 | 34.226 | 336 | 212 | 2 | 1 | 329 | 3 | 336 | 2.04e-65 | 211 |
| MS.gene039953.t1 | AT3G53210 | 37.309 | 327 | 192 | 4 | 3 | 323 | 7 | 326 | 1.04e-64 | 209 |
| MS.gene039953.t1 | AT3G30340 | 35.161 | 310 | 196 | 4 | 28 | 335 | 33 | 339 | 4.56e-63 | 205 |
| MS.gene039953.t1 | AT2G37450 | 45.217 | 230 | 121 | 3 | 118 | 346 | 61 | 286 | 1.95e-61 | 199 |
| MS.gene039953.t1 | AT4G30420 | 34.810 | 316 | 201 | 2 | 13 | 325 | 6 | 319 | 9.98e-58 | 192 |
| MS.gene039953.t1 | AT4G30420 | 34.365 | 323 | 207 | 2 | 6 | 325 | 9 | 329 | 1.01e-57 | 192 |
| MS.gene039953.t1 | AT1G09380 | 32.000 | 325 | 207 | 4 | 6 | 322 | 8 | 326 | 2.23e-57 | 191 |
| MS.gene039953.t1 | AT1G43650 | 34.921 | 315 | 200 | 2 | 11 | 325 | 12 | 321 | 2.87e-56 | 187 |
| MS.gene039953.t1 | AT1G25270 | 33.815 | 346 | 213 | 7 | 11 | 349 | 8 | 344 | 5.37e-54 | 181 |
| MS.gene039953.t1 | AT1G68170 | 34.286 | 350 | 222 | 3 | 11 | 354 | 8 | 355 | 1.16e-52 | 178 |
| MS.gene039953.t1 | AT1G68170 | 34.286 | 350 | 222 | 3 | 11 | 354 | 18 | 365 | 1.88e-52 | 177 |
| MS.gene039953.t1 | AT4G28040 | 32.722 | 327 | 201 | 5 | 11 | 333 | 13 | 324 | 1.86e-51 | 175 |
| MS.gene039953.t1 | AT4G28040 | 32.722 | 327 | 201 | 5 | 11 | 333 | 13 | 324 | 1.86e-51 | 175 |
| MS.gene039953.t1 | AT4G28040 | 32.722 | 327 | 201 | 5 | 11 | 333 | 13 | 324 | 1.86e-51 | 175 |
| MS.gene039953.t1 | AT4G28040 | 32.722 | 327 | 201 | 5 | 11 | 333 | 13 | 324 | 1.86e-51 | 175 |
| MS.gene039953.t1 | AT4G28040 | 32.722 | 327 | 201 | 5 | 11 | 333 | 13 | 324 | 1.86e-51 | 175 |
| MS.gene039953.t1 | AT1G01070 | 32.229 | 332 | 217 | 4 | 3 | 330 | 13 | 340 | 6.93e-50 | 171 |
| MS.gene039953.t1 | AT4G01440 | 27.457 | 346 | 236 | 2 | 3 | 348 | 7 | 337 | 2.44e-48 | 167 |
| MS.gene039953.t1 | AT3G53210 | 39.592 | 245 | 141 | 3 | 82 | 323 | 29 | 269 | 3.30e-48 | 165 |
| MS.gene039953.t1 | AT3G53210 | 37.354 | 257 | 148 | 4 | 3 | 253 | 7 | 256 | 9.05e-48 | 162 |
| MS.gene039953.t1 | AT5G40230 | 31.792 | 346 | 213 | 6 | 6 | 336 | 21 | 358 | 1.05e-47 | 165 |
| MS.gene039953.t1 | AT1G11450 | 31.118 | 331 | 220 | 4 | 6 | 333 | 16 | 341 | 1.87e-46 | 162 |
| MS.gene039953.t1 | AT4G01430 | 32.787 | 305 | 195 | 7 | 27 | 325 | 30 | 330 | 2.58e-45 | 159 |
| MS.gene039953.t1 | AT5G40240 | 30.699 | 329 | 221 | 4 | 6 | 330 | 20 | 345 | 1.72e-44 | 157 |
| MS.gene039953.t1 | AT5G40240 | 30.699 | 329 | 221 | 4 | 6 | 330 | 20 | 345 | 1.72e-44 | 157 |
| MS.gene039953.t1 | AT5G40240 | 30.699 | 329 | 221 | 4 | 6 | 330 | 34 | 359 | 2.70e-44 | 157 |
| MS.gene039953.t1 | AT3G28130 | 30.818 | 318 | 206 | 7 | 26 | 333 | 33 | 346 | 3.90e-44 | 155 |
| MS.gene039953.t1 | AT1G11450 | 32.660 | 297 | 192 | 4 | 40 | 333 | 6 | 297 | 1.37e-43 | 153 |
| MS.gene039953.t1 | AT3G28130 | 32.677 | 254 | 161 | 4 | 88 | 333 | 9 | 260 | 2.66e-43 | 151 |
| MS.gene039953.t1 | AT3G28130 | 32.677 | 254 | 161 | 4 | 88 | 333 | 9 | 260 | 2.66e-43 | 151 |
| MS.gene039953.t1 | AT1G11460 | 31.595 | 326 | 210 | 6 | 6 | 325 | 16 | 334 | 7.70e-43 | 152 |
| MS.gene039953.t1 | AT4G01440 | 27.907 | 301 | 215 | 1 | 3 | 303 | 7 | 305 | 1.03e-42 | 151 |
| MS.gene039953.t1 | AT1G11450 | 32.423 | 293 | 190 | 4 | 44 | 333 | 3 | 290 | 2.03e-42 | 149 |
| MS.gene039953.t1 | AT3G18200 | 32.031 | 256 | 164 | 6 | 102 | 353 | 1 | 250 | 2.70e-42 | 148 |
| MS.gene039953.t1 | AT1G01070 | 32.746 | 284 | 183 | 4 | 51 | 330 | 14 | 293 | 2.71e-42 | 150 |
| MS.gene039953.t1 | AT3G28080 | 32.463 | 268 | 172 | 5 | 62 | 325 | 71 | 333 | 3.42e-42 | 150 |
| MS.gene039953.t1 | AT3G28080 | 33.054 | 239 | 156 | 3 | 89 | 325 | 8 | 244 | 3.88e-42 | 148 |
| MS.gene039953.t1 | AT3G28080 | 33.054 | 239 | 156 | 3 | 89 | 325 | 8 | 244 | 3.88e-42 | 148 |
| MS.gene039953.t1 | AT3G28080 | 33.054 | 239 | 156 | 3 | 89 | 325 | 8 | 244 | 3.88e-42 | 148 |
| MS.gene039953.t1 | AT3G28080 | 33.054 | 239 | 156 | 3 | 89 | 325 | 8 | 244 | 3.88e-42 | 148 |
| MS.gene039953.t1 | AT3G28070 | 30.741 | 270 | 169 | 5 | 88 | 347 | 7 | 268 | 7.12e-42 | 147 |
| MS.gene039953.t1 | AT5G64700 | 32.046 | 259 | 167 | 2 | 1 | 252 | 3 | 259 | 2.69e-41 | 145 |
| MS.gene039953.t1 | AT3G28080 | 33.054 | 239 | 156 | 3 | 89 | 325 | 89 | 325 | 3.05e-41 | 148 |
| MS.gene039953.t1 | AT3G28100 | 30.094 | 319 | 215 | 6 | 11 | 325 | 19 | 333 | 4.33e-41 | 147 |
| MS.gene039953.t1 | AT3G45870 | 29.538 | 325 | 215 | 3 | 7 | 320 | 13 | 334 | 4.67e-41 | 148 |
| MS.gene039953.t1 | AT3G28070 | 30.741 | 270 | 169 | 5 | 88 | 347 | 99 | 360 | 6.47e-41 | 147 |
| MS.gene039953.t1 | AT1G70260 | 29.430 | 316 | 205 | 4 | 22 | 325 | 28 | 337 | 3.65e-40 | 145 |
| MS.gene039953.t1 | AT3G28050 | 32.026 | 306 | 198 | 6 | 22 | 325 | 29 | 326 | 6.15e-40 | 145 |
| MS.gene039953.t1 | AT5G45370 | 28.571 | 315 | 209 | 4 | 18 | 330 | 32 | 332 | 1.59e-39 | 143 |
| MS.gene039953.t1 | AT3G30340 | 32.365 | 241 | 157 | 3 | 28 | 267 | 33 | 268 | 2.21e-39 | 141 |
| MS.gene039953.t1 | AT5G40210 | 28.349 | 321 | 208 | 8 | 11 | 329 | 18 | 318 | 9.67e-39 | 141 |
| MS.gene039953.t1 | AT5G45370 | 27.928 | 333 | 212 | 5 | 18 | 330 | 32 | 356 | 1.49e-38 | 141 |
| MS.gene039953.t1 | AT5G45370 | 27.928 | 333 | 212 | 5 | 18 | 330 | 32 | 356 | 1.49e-38 | 141 |
| MS.gene039953.t1 | AT4G15540 | 28.363 | 342 | 231 | 4 | 6 | 346 | 17 | 345 | 1.54e-38 | 140 |
| MS.gene039953.t1 | AT4G15540 | 28.363 | 342 | 231 | 4 | 6 | 346 | 17 | 345 | 1.54e-38 | 140 |
| MS.gene039953.t1 | AT4G19185 | 28.324 | 346 | 222 | 4 | 18 | 344 | 33 | 371 | 3.78e-38 | 140 |
| MS.gene039953.t1 | AT4G01430 | 32.509 | 283 | 181 | 7 | 27 | 303 | 30 | 308 | 8.09e-38 | 138 |
| MS.gene039953.t1 | AT4G01450 | 30.872 | 298 | 200 | 3 | 28 | 325 | 32 | 323 | 2.80e-37 | 137 |
| MS.gene039953.t1 | AT1G11450 | 31.338 | 284 | 187 | 4 | 6 | 286 | 16 | 294 | 4.26e-37 | 136 |
| MS.gene039953.t1 | AT4G01450 | 32.906 | 234 | 151 | 3 | 28 | 261 | 32 | 259 | 5.91e-37 | 136 |
| MS.gene039953.t1 | AT4G01450 | 35.377 | 212 | 131 | 3 | 28 | 239 | 32 | 237 | 8.17e-37 | 134 |
| MS.gene039953.t1 | AT1G11450 | 32.411 | 253 | 163 | 4 | 84 | 333 | 2 | 249 | 2.41e-36 | 132 |
| MS.gene039953.t1 | AT5G47470 | 28.793 | 323 | 217 | 4 | 11 | 329 | 35 | 348 | 3.32e-36 | 135 |
| MS.gene039953.t1 | AT5G47470 | 28.793 | 323 | 217 | 4 | 11 | 329 | 63 | 376 | 5.91e-36 | 135 |
| MS.gene039953.t1 | AT5G47470 | 28.793 | 323 | 217 | 4 | 11 | 329 | 63 | 376 | 7.22e-36 | 134 |
| MS.gene039953.t1 | AT4G01440 | 29.870 | 231 | 162 | 0 | 3 | 233 | 7 | 237 | 1.59e-35 | 130 |
| MS.gene039953.t1 | AT3G45870 | 27.922 | 308 | 208 | 3 | 7 | 303 | 13 | 317 | 6.53e-34 | 128 |
| MS.gene039953.t1 | AT1G60050 | 27.119 | 354 | 246 | 5 | 6 | 349 | 13 | 364 | 3.18e-33 | 127 |
| MS.gene039953.t1 | AT4G01450 | 35.176 | 199 | 125 | 2 | 28 | 226 | 32 | 226 | 1.48e-32 | 122 |
| MS.gene039953.t1 | AT4G24980 | 29.321 | 324 | 157 | 7 | 27 | 349 | 8 | 260 | 6.66e-32 | 121 |
| MS.gene039953.t1 | AT3G28070 | 31.651 | 218 | 145 | 3 | 88 | 303 | 99 | 314 | 1.05e-31 | 122 |
| MS.gene039953.t1 | AT1G43650 | 32.677 | 254 | 165 | 3 | 11 | 263 | 12 | 260 | 4.32e-31 | 119 |
| MS.gene039953.t1 | AT3G45870 | 30.126 | 239 | 156 | 1 | 7 | 234 | 13 | 251 | 1.99e-30 | 117 |
| MS.gene039953.t1 | AT3G28130 | 30.493 | 223 | 145 | 4 | 119 | 333 | 1 | 221 | 3.60e-30 | 115 |
| MS.gene039953.t1 | AT4G01440 | 25.620 | 242 | 165 | 2 | 107 | 348 | 3 | 229 | 1.95e-29 | 114 |
| MS.gene039953.t1 | AT4G01440 | 25.620 | 242 | 165 | 2 | 107 | 348 | 3 | 229 | 1.95e-29 | 114 |
| MS.gene039953.t1 | AT3G28080 | 30.144 | 209 | 142 | 3 | 119 | 325 | 1 | 207 | 2.88e-29 | 113 |
| MS.gene039953.t1 | AT3G28070 | 28.452 | 239 | 153 | 5 | 119 | 347 | 1 | 231 | 6.31e-29 | 112 |
| MS.gene039953.t1 | AT4G19185 | 27.046 | 281 | 179 | 4 | 83 | 344 | 20 | 293 | 1.57e-27 | 110 |
| MS.gene039953.t1 | AT3G28130 | 30.973 | 226 | 149 | 5 | 26 | 247 | 33 | 255 | 1.48e-26 | 106 |
| MS.gene039953.t1 | AT3G28080 | 29.478 | 268 | 126 | 7 | 62 | 325 | 71 | 279 | 9.64e-25 | 102 |
| MS.gene039953.t1 | AT3G28100 | 29.876 | 241 | 162 | 5 | 11 | 247 | 19 | 256 | 1.77e-24 | 101 |
| MS.gene039953.t1 | AT3G28080 | 29.707 | 239 | 110 | 5 | 89 | 325 | 8 | 190 | 1.82e-24 | 99.8 |
| MS.gene039953.t1 | AT4G16620 | 25.072 | 347 | 250 | 4 | 1 | 346 | 7 | 344 | 4.34e-24 | 102 |
| MS.gene039953.t1 | AT5G45370 | 26.848 | 257 | 160 | 5 | 89 | 325 | 1 | 249 | 6.74e-24 | 99.8 |
| MS.gene039953.t1 | AT5G45370 | 26.848 | 257 | 160 | 5 | 89 | 325 | 1 | 249 | 6.74e-24 | 99.8 |
| MS.gene039953.t1 | AT3G45870 | 29.461 | 241 | 153 | 5 | 91 | 320 | 25 | 259 | 4.86e-21 | 92.4 |
| MS.gene039953.t1 | AT3G28130 | 35.036 | 137 | 85 | 3 | 26 | 160 | 33 | 167 | 2.82e-18 | 82.8 |
| MS.gene039953.t1 | AT4G01430 | 28.934 | 197 | 131 | 6 | 134 | 325 | 1 | 193 | 8.29e-18 | 81.6 |
| MS.gene039953.t1 | AT4G16620 | 26.953 | 256 | 178 | 3 | 91 | 346 | 1 | 247 | 1.35e-17 | 82.0 |
| MS.gene039953.t1 | AT4G16620 | 26.953 | 256 | 178 | 3 | 91 | 346 | 1 | 247 | 1.35e-17 | 82.0 |
| MS.gene039953.t1 | AT3G28100 | 30.729 | 192 | 127 | 4 | 11 | 198 | 19 | 208 | 2.40e-17 | 81.3 |
| MS.gene039953.t1 | AT5G45370 | 25.108 | 231 | 145 | 5 | 120 | 330 | 74 | 296 | 1.77e-15 | 76.6 |
| MS.gene039953.t1 | AT4G16620 | 27.014 | 211 | 151 | 3 | 14 | 223 | 20 | 228 | 2.43e-15 | 75.5 |
| MS.gene039953.t1 | AT3G45870 | 27.232 | 224 | 146 | 5 | 91 | 303 | 25 | 242 | 2.54e-14 | 72.4 |
| MS.gene039953.t1 | AT3G45870 | 27.232 | 224 | 146 | 5 | 91 | 303 | 25 | 242 | 2.54e-14 | 72.4 |
| MS.gene039953.t1 | AT3G45870 | 26.882 | 186 | 122 | 3 | 146 | 320 | 1 | 183 | 1.95e-12 | 66.6 |
| MS.gene039953.t1 | AT3G45870 | 30.323 | 155 | 94 | 3 | 91 | 234 | 25 | 176 | 4.10e-11 | 62.4 |
Find 88 sgRNAs with CRISPR-Local
Find 255 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGTCTTGAGGTTTGGGCTAT+TGG | 0.175402 | 3.1:-59434301 | MS.gene039953:CDS |
| TCAACCTTAATATGCTTAAT+TGG | 0.206118 | 3.1:-59434370 | MS.gene039953:CDS |
| GATCAAGGATTTACTTTCTT+GGG | 0.226580 | 3.1:-59435006 | MS.gene039953:CDS |
| ATGATCATCACTTGTGCTTT+AGG | 0.227026 | 3.1:-59433315 | MS.gene039953:CDS |
| TAGACATCAGTTGAAGTAAT+TGG | 0.249851 | 3.1:+59432904 | None:intergenic |
| GTCACTCTGGTCTTGAGGTT+TGG | 0.255637 | 3.1:-59434309 | MS.gene039953:CDS |
| GCACTTCAATTTGGGTTTGC+AGG | 0.256620 | 3.1:-59437474 | MS.gene039953:CDS |
| TACAACTTTGCAGGAAAATT+AGG | 0.260312 | 3.1:-59436913 | MS.gene039953:intron |
| AGCACCAATTAAGCATATTA+AGG | 0.276307 | 3.1:+59434366 | None:intergenic |
| GGTTGGGACTTTAGACTATA+TGG | 0.302017 | 3.1:-59434280 | MS.gene039953:CDS |
| TTAACGGTGGCACTTCAATT+TGG | 0.325006 | 3.1:-59437483 | MS.gene039953:CDS |
| GGGACATTAGTAACCTTTGC+AGG | 0.325264 | 3.1:-59434705 | MS.gene039953:CDS |
| AAGACACCCATTGTCATCTT+TGG | 0.325604 | 3.1:+59436890 | None:intergenic |
| TCACTCTGGTCTTGAGGTTT+GGG | 0.326320 | 3.1:-59434308 | MS.gene039953:CDS |
| TTTGTTGATTACAGTATCAT+TGG | 0.334370 | 3.1:-59433048 | MS.gene039953:intron |
| TTGAGGTTTGGGCTATTGGT+TGG | 0.342298 | 3.1:-59434297 | MS.gene039953:CDS |
| AGATCAAGGATTTACTTTCT+TGG | 0.355086 | 3.1:-59435007 | MS.gene039953:CDS |
| TCAGTTTGCTTCATTGCAAC+TGG | 0.357064 | 3.1:+59432937 | None:intergenic |
| AGTGGACTTGCTCTGCAAAA+AGG | 0.357842 | 3.1:+59433286 | None:intergenic |
| ATAGACCCACTGCAATAATC+AGG | 0.361308 | 3.1:+59433022 | None:intergenic |
| TAACGGTGGCACTTCAATTT+GGG | 0.361637 | 3.1:-59437482 | MS.gene039953:CDS |
| TGAGGTTTGGGCTATTGGTT+GGG | 0.366132 | 3.1:-59434296 | MS.gene039953:CDS |
| ATTTGGTTACCTGAAAATTA+CGG | 0.378910 | 3.1:+59434912 | None:intergenic |
| TTAAATGCTGTATAAAATAC+TGG | 0.379245 | 3.1:+59433348 | None:intergenic |
| AGGAACACTCTTTCTAATGA+TGG | 0.410004 | 3.1:-59434571 | MS.gene039953:CDS |
| ACTCTCAAACATTGGGTCTC+AGG | 0.410947 | 3.1:-59434591 | MS.gene039953:CDS |
| GGTAATAAAATGATTAAGGC+AGG | 0.414390 | 3.1:-59437516 | None:intergenic |
| GGGTCTATATTCTGTGGTGT+GGG | 0.434106 | 3.1:-59433007 | MS.gene039953:CDS |
| GGCAGGGCCTTATGTGTTAA+CGG | 0.445853 | 3.1:-59437499 | MS.gene039953:CDS |
| CGAAGCATAGCAAAAGTGAT+TGG | 0.452310 | 3.1:-59434726 | MS.gene039953:CDS |
| TTTAGGCCAGTGATAGATCA+AGG | 0.452691 | 3.1:-59435021 | MS.gene039953:intron |
| ACACGCAAACTCTCAAACAT+TGG | 0.463592 | 3.1:-59434599 | MS.gene039953:CDS |
| GGGTGTCTTTGTGCGGATAA+TGG | 0.463680 | 3.1:-59436876 | MS.gene039953:CDS |
| GTTGATAGTGACATTTCTGC+TGG | 0.464929 | 3.1:+59434388 | None:intergenic |
| TAATGATGGGTTGTGTGGCT+TGG | 0.467472 | 3.1:-59434557 | MS.gene039953:CDS |
| TGGGTCTATATTCTGTGGTG+TGG | 0.473719 | 3.1:-59433008 | MS.gene039953:CDS |
| TGCTTCATTGCAACTGGTGA+TGG | 0.475348 | 3.1:+59432943 | None:intergenic |
| CACGCAAACTCTCAAACATT+GGG | 0.482922 | 3.1:-59434598 | MS.gene039953:CDS |
| ATTCATTCCCATGTTGAGAC+TGG | 0.492222 | 3.1:+59437431 | None:intergenic |
| ATTAGGCCAAAGATGACAAT+GGG | 0.506829 | 3.1:-59436896 | MS.gene039953:CDS |
| CTCCATGGCCAGTCTCAACA+TGG | 0.517219 | 3.1:-59437439 | MS.gene039953:CDS |
| TTTCAGGGAATAATTACCTC+AGG | 0.519170 | 3.1:-59433414 | MS.gene039953:intron |
| GGAACACTCTTTCTAATGAT+GGG | 0.519597 | 3.1:-59434570 | MS.gene039953:CDS |
| TGGAGCCCTGATTATTGCAG+TGG | 0.520137 | 3.1:-59433028 | MS.gene039953:CDS |
| GAAGCATAGCAAAAGTGATT+GGG | 0.521865 | 3.1:-59434725 | MS.gene039953:CDS |
| GTAAATCCTTGATCTATCAC+TGG | 0.527191 | 3.1:+59435015 | None:intergenic |
| ACAAGTGATGATCATACAAA+GGG | 0.529299 | 3.1:+59433323 | None:intergenic |
| TCCCATGTTGAGACTGGCCA+TGG | 0.532428 | 3.1:+59437437 | None:intergenic |
| TTCATTGCTGAGCGTCACTC+TGG | 0.533655 | 3.1:-59434322 | MS.gene039953:CDS |
| CTTTCTAATGATGGGTTGTG+TGG | 0.538049 | 3.1:-59434562 | MS.gene039953:CDS |
| CAGAGCAAGTCCACTTGGGA+AGG | 0.538099 | 3.1:-59433278 | MS.gene039953:intron |
| AGTGCCACCGTTAACACATA+AGG | 0.539701 | 3.1:+59437492 | None:intergenic |
| GAATAGAAAAGGTGAATTTG+TGG | 0.542285 | 3.1:+59434654 | None:intergenic |
| ATCAAGGATTTACTTTCTTG+GGG | 0.542739 | 3.1:-59435005 | MS.gene039953:CDS |
| AGCGTATTATGTGCAAGGAT+TGG | 0.543440 | 3.1:-59433388 | MS.gene039953:CDS |
| AATAGAAAAGGTGAATTTGT+GGG | 0.544421 | 3.1:+59434655 | None:intergenic |
| CTTGGGGATGCAATATACAT+CGG | 0.549174 | 3.1:-59434989 | MS.gene039953:CDS |
| TGAGCGTCACTCTGGTCTTG+AGG | 0.557312 | 3.1:-59434314 | MS.gene039953:CDS |
| GGACATTAGTAACCTTTGCA+GGG | 0.563644 | 3.1:-59434704 | MS.gene039953:CDS |
| TTCATTGCAACTGGTGATGG+TGG | 0.573404 | 3.1:+59432946 | None:intergenic |
| GGAGCCCTGATTATTGCAGT+GGG | 0.579920 | 3.1:-59433027 | MS.gene039953:CDS |
| GTAATAAAATGATTAAGGCA+GGG | 0.587073 | 3.1:-59437515 | None:intergenic |
| GGTCTATATTCTGTGGTGTG+GGG | 0.589276 | 3.1:-59433006 | MS.gene039953:CDS |
| GCAACTGGTGATGGTGGCAT+AGG | 0.594061 | 3.1:+59432952 | None:intergenic |
| CACAAGTGATGATCATACAA+AGG | 0.594526 | 3.1:+59433322 | None:intergenic |
| GGAATAGCGTATTATGTGCA+AGG | 0.597413 | 3.1:-59433393 | MS.gene039953:CDS |
| AATTAGGCCAAAGATGACAA+TGG | 0.598592 | 3.1:-59436897 | MS.gene039953:CDS |
| CATCATCAATGCCCCTGCAA+AGG | 0.600667 | 3.1:+59434692 | None:intergenic |
| TTAGAAGTTACCTTCCCAAG+TGG | 0.611177 | 3.1:+59433268 | None:intergenic |
| GAAAATTACGGCTAGCACAA+AGG | 0.618070 | 3.1:+59434924 | None:intergenic |
| TAGACCCACTGCAATAATCA+GGG | 0.620855 | 3.1:+59433023 | None:intergenic |
| TTTGCAGAGCAAGTCCACTT+GGG | 0.628276 | 3.1:-59433282 | MS.gene039953:CDS |
| TGCAGTGGGTCTATATTCTG+TGG | 0.631521 | 3.1:-59433013 | MS.gene039953:CDS |
| GGATTGGTATTTCAAAGCAG+AGG | 0.631848 | 3.1:-59433372 | MS.gene039953:CDS |
| AGGAGCATACATATTCTCCA+TGG | 0.632777 | 3.1:-59437454 | MS.gene039953:CDS |
| GCTAGCACAAAGGTAACAGA+AGG | 0.636570 | 3.1:+59434934 | None:intergenic |
| GACATTAGTAACCTTTGCAG+GGG | 0.641806 | 3.1:-59434703 | MS.gene039953:CDS |
| ACTATATGGTCCTCTCTACA+CGG | 0.654238 | 3.1:-59434266 | MS.gene039953:intron |
| ATAGAGGGTACCGTGTAGAG+AGG | 0.656220 | 3.1:+59434256 | None:intergenic |
| TCCATGGCCAGTCTCAACAT+GGG | 0.656868 | 3.1:-59437438 | MS.gene039953:CDS |
| TTGATGATGATACTTTACAA+AGG | 0.659362 | 3.1:-59434678 | MS.gene039953:CDS |
| CACATAATACGCTATTCCTG+AGG | 0.664509 | 3.1:+59433398 | None:intergenic |
| TGCTATGCAAACTAGTGTGG+TGG | 0.665301 | 3.1:-59434347 | MS.gene039953:CDS |
| TGGTGCTATGCAAACTAGTG+TGG | 0.682257 | 3.1:-59434350 | MS.gene039953:CDS |
| TGACAATGGGTGTCTTTGTG+CGG | 0.682941 | 3.1:-59436883 | MS.gene039953:CDS |
| AAGTGATGATCATACAAAGG+GGG | 0.720906 | 3.1:+59433325 | None:intergenic |
| CAAGTGATGATCATACAAAG+GGG | 0.746307 | 3.1:+59433324 | None:intergenic |
| AGGGCCTTATGTGTTAACGG+TGG | 0.764572 | 3.1:-59437496 | MS.gene039953:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTAAAATAATTTTTTATT+AGG | - | chr3.1:59434717-59434736 | MS.gene039953:CDS | 0.0% |
| !! | AAATTATCATTATTAACTAT+TGG | + | chr3.1:59435117-59435136 | None:intergenic | 10.0% |
| !! | AATAGTTAATAATGATAATT+TGG | - | chr3.1:59435116-59435135 | MS.gene039953:intron | 10.0% |
| !! | TATATATATGAAAAAAGTTA+GGG | + | chr3.1:59436192-59436211 | None:intergenic | 10.0% |
| !! | TCCTAATATATTAAAATTAA+AGG | - | chr3.1:59435530-59435549 | MS.gene039953:intron | 10.0% |
| !! | TGTAATTAAGATTATAAATT+TGG | + | chr3.1:59436792-59436811 | None:intergenic | 10.0% |
| !! | TTATATATATGAAAAAAGTT+AGG | + | chr3.1:59436193-59436212 | None:intergenic | 10.0% |
| !!! | ACCTTTAATTTTAATATATT+AGG | + | chr3.1:59435534-59435553 | None:intergenic | 10.0% |
| !!! | TATGCTTTATTTTAATATAT+GGG | - | chr3.1:59436746-59436765 | MS.gene039953:intron | 10.0% |
| !!! | TCATTTTCTTTATAAAATTT+TGG | - | chr3.1:59434614-59434633 | MS.gene039953:CDS | 10.0% |
| !!! | TTATGCTTTATTTTAATATA+TGG | - | chr3.1:59436745-59436764 | MS.gene039953:intron | 10.0% |
| !!! | TTTTCTTTAAAGATATTTAA+AGG | - | chr3.1:59433433-59433452 | MS.gene039953:intron | 10.0% |
| !! | AATGATTAAAAGAAAGAAAA+TGG | + | chr3.1:59435150-59435169 | None:intergenic | 15.0% |
| !! | ATGCAAAAATAGTAAATAAT+TGG | - | chr3.1:59434685-59434704 | MS.gene039953:CDS | 15.0% |
| !! | CAATGAATTTAAAAATTTCA+GGG | - | chr3.1:59436981-59437000 | MS.gene039953:intron | 15.0% |
| !! | GTATGGAATTAAAATATTTA+CGG | - | chr3.1:59433177-59433196 | MS.gene039953:intron | 15.0% |
| !! | GTCATTTATCAAATTATTAT+TGG | + | chr3.1:59437309-59437328 | None:intergenic | 15.0% |
| !! | TATATTAAAATTAAAGGTCT+TGG | - | chr3.1:59435536-59435555 | MS.gene039953:intron | 15.0% |
| !! | TCAATGAATTTAAAAATTTC+AGG | - | chr3.1:59436980-59436999 | MS.gene039953:intron | 15.0% |
| !! | TGAATTACTAACAAAAATTA+GGG | - | chr3.1:59433961-59433980 | MS.gene039953:intron | 15.0% |
| !! | TGCAAAAATAGTAAATAATT+GGG | - | chr3.1:59434686-59434705 | MS.gene039953:CDS | 15.0% |
| !! | TTATACATTTAAATAAGTGT+AGG | + | chr3.1:59434916-59434935 | None:intergenic | 15.0% |
| !! | TTGAATTACTAACAAAAATT+AGG | - | chr3.1:59433960-59433979 | MS.gene039953:intron | 15.0% |
| !!! | AAATAAAGCATAATTTTGAT+TGG | + | chr3.1:59436738-59436757 | None:intergenic | 15.0% |
| !!! | ATGCTTTATTTTAATATATG+GGG | - | chr3.1:59436747-59436766 | MS.gene039953:intron | 15.0% |
| !!! | GATAAATAATTGTTGATTTT+TGG | - | chr3.1:59436371-59436390 | MS.gene039953:intron | 15.0% |
| !!! | TACTATCCATATTTTTTTTA+GGG | + | chr3.1:59433783-59433802 | None:intergenic | 15.0% |
| !! | AAAACACTTTCATAAACAAA+AGG | + | chr3.1:59435914-59435933 | None:intergenic | 20.0% |
| !! | AAACACTTTCATAAACAAAA+GGG | + | chr3.1:59435913-59435932 | None:intergenic | 20.0% |
| !! | AAGAGAAATAAGTATTTCAA+GGG | - | chr3.1:59433830-59433849 | MS.gene039953:intron | 20.0% |
| !! | ACATAATTAAATGTAATCAG+AGG | - | chr3.1:59437327-59437346 | MS.gene039953:intron | 20.0% |
| !! | AGAAAAAGTTATTATTGCAT+TGG | + | chr3.1:59435030-59435049 | None:intergenic | 20.0% |
| !! | AGTTTACAAAAATATGGTTT+GGG | + | chr3.1:59436659-59436678 | None:intergenic | 20.0% |
| !! | ATCATTCGATTAAGATTTAA+TGG | + | chr3.1:59433330-59433349 | None:intergenic | 20.0% |
| !! | ATGTTAGAAATCACAAAATT+AGG | - | chr3.1:59434189-59434208 | MS.gene039953:intron | 20.0% |
| !! | ATTGTAAAACAGAATAAGTA+AGG | + | chr3.1:59433089-59433108 | None:intergenic | 20.0% |
| !! | TAAGAGAAATAAGTATTTCA+AGG | - | chr3.1:59433829-59433848 | MS.gene039953:intron | 20.0% |
| !! | TAGTTTACAAAAATATGGTT+TGG | + | chr3.1:59436660-59436679 | None:intergenic | 20.0% |
| !! | TATTAGGAGAACTTATAATT+TGG | + | chr3.1:59435518-59435537 | None:intergenic | 20.0% |
| !! | TGTAGGTCTATTATTAAAAA+GGG | + | chr3.1:59434869-59434888 | None:intergenic | 20.0% |
| !! | TTAAATGCTGTATAAAATAC+TGG | + | chr3.1:59437065-59437084 | None:intergenic | 20.0% |
| !! | TTATATAACCCGAAAAAAAT+AGG | + | chr3.1:59436461-59436480 | None:intergenic | 20.0% |
| !! | TTCAAAAGTTGTCATATAAA+TGG | - | chr3.1:59434641-59434660 | MS.gene039953:CDS | 20.0% |
| !! | TTGATTATAACACAAGTTAA+TGG | + | chr3.1:59435628-59435647 | None:intergenic | 20.0% |
| !! | TTGTAAAACAGAATAAGTAA+GGG | + | chr3.1:59433088-59433107 | None:intergenic | 20.0% |
| !! | TTTCTAACACTTTATAAGTA+TGG | - | chr3.1:59433751-59433770 | MS.gene039953:intron | 20.0% |
| !!! | AAACCATATTTTTGTAAACT+AGG | - | chr3.1:59436659-59436678 | MS.gene039953:intron | 20.0% |
| !!! | AAACTTTTATAAGAAAGAAG+AGG | + | chr3.1:59437172-59437191 | None:intergenic | 20.0% |
| !!! | ACTATCCATATTTTTTTTAG+GGG | + | chr3.1:59433782-59433801 | None:intergenic | 20.0% |
| !!! | CTACTATCCATATTTTTTTT+AGG | + | chr3.1:59433784-59433803 | None:intergenic | 20.0% |
| !!! | TATCGATAAGTGTTTTTTTT+TGG | - | chr3.1:59434009-59434028 | MS.gene039953:intron | 20.0% |
| !!! | TCTTTAAAGATATTTAAAGG+TGG | - | chr3.1:59433436-59433455 | MS.gene039953:intron | 20.0% |
| !!! | TTTTTTTGGCATTAATTCTT+CGG | + | chr3.1:59435595-59435614 | None:intergenic | 20.0% |
| ! | AAAACACTTATCGATAGAAT+TGG | + | chr3.1:59434005-59434024 | None:intergenic | 25.0% |
| ! | AAAAGGGAAATGTTAAGAAA+AGG | + | chr3.1:59434853-59434872 | None:intergenic | 25.0% |
| ! | AACACTTTCATAAACAAAAG+GGG | + | chr3.1:59435912-59435931 | None:intergenic | 25.0% |
| ! | AATAGAAAAGGTGAATTTGT+GGG | + | chr3.1:59435758-59435777 | None:intergenic | 25.0% |
| ! | AATGAAGTAGCTGTTTAAAT+TGG | - | chr3.1:59436599-59436618 | MS.gene039953:intron | 25.0% |
| ! | AATGATTATCAATGTTTCCA+AGG | - | chr3.1:59433344-59433363 | MS.gene039953:CDS | 25.0% |
| ! | ATAGTCCCCTAAAAAAAATA+TGG | - | chr3.1:59433774-59433793 | MS.gene039953:intron | 25.0% |
| ! | ATGAAGTAGCTGTTTAAATT+GGG | - | chr3.1:59436600-59436619 | MS.gene039953:intron | 25.0% |
| ! | ATTATAACACAAGTTAATGG+TGG | + | chr3.1:59435625-59435644 | None:intergenic | 25.0% |
| ! | ATTTAAACAGCTACTTCATT+TGG | + | chr3.1:59436599-59436618 | None:intergenic | 25.0% |
| ! | ATTTGGTTACCTGAAAATTA+CGG | + | chr3.1:59435501-59435520 | None:intergenic | 25.0% |
| ! | CGTAAAAAATTTGTCTCAAT+TGG | - | chr3.1:59435320-59435339 | MS.gene039953:intron | 25.0% |
| ! | GTGTAGGTCTATTATTAAAA+AGG | + | chr3.1:59434870-59434889 | None:intergenic | 25.0% |
| ! | TCAACCTTAATATGCTTAAT+TGG | - | chr3.1:59436040-59436059 | MS.gene039953:intron | 25.0% |
| ! | TGTGTTATAATCAATGTATC+AGG | - | chr3.1:59435634-59435653 | MS.gene039953:intron | 25.0% |
| ! | TTAAACACACAAAATTGAGT+CGG | - | chr3.1:59434287-59434306 | MS.gene039953:CDS | 25.0% |
| ! | TTACATCTAAAGAGAATAAG+TGG | + | chr3.1:59434136-59434155 | None:intergenic | 25.0% |
| ! | TTTCTCTTTCTCTATTACTT+TGG | - | chr3.1:59434575-59434594 | MS.gene039953:CDS | 25.0% |
| !! | ATATCATTTCTCTTTTGCAT+AGG | + | chr3.1:59434490-59434509 | None:intergenic | 25.0% |
| !! | GTACCATTTGGTATTATTTT+AGG | - | chr3.1:59435372-59435391 | MS.gene039953:intron | 25.0% |
| !! | TATCATTTCTCTTTTGCATA+GGG | + | chr3.1:59434489-59434508 | None:intergenic | 25.0% |
| !! | TTAAGTTCGAAAAAAAGTGT+AGG | + | chr3.1:59434886-59434905 | None:intergenic | 25.0% |
| !! | TTTGTTGATTACAGTATCAT+TGG | - | chr3.1:59437362-59437381 | MS.gene039953:CDS | 25.0% |
| !! | TTTTTCATTGCATTTGCAAT+AGG | + | chr3.1:59436351-59436370 | None:intergenic | 25.0% |
| !!! | ATGGTGGTATAAGATTTTTT+TGG | + | chr3.1:59435609-59435628 | None:intergenic | 25.0% |
| !!! | TTGATGATGATACTTTACAA+AGG | - | chr3.1:59435732-59435751 | MS.gene039953:intron | 25.0% |
| AAAGATTAGAATGTCTACCA+AGG | - | chr3.1:59436218-59436237 | MS.gene039953:intron | 30.0% | |
| AAATGTTAACATGTAGCCTT+AGG | + | chr3.1:59435572-59435591 | None:intergenic | 30.0% | |
| ACAAGTGATGATCATACAAA+GGG | + | chr3.1:59437090-59437109 | None:intergenic | 30.0% | |
| ACATGTTTCATTCACTAACT+TGG | - | chr3.1:59433127-59433146 | MS.gene039953:intron | 30.0% | |
| AGAAAAGTGGTAATTAGCAT+AGG | + | chr3.1:59433477-59433496 | None:intergenic | 30.0% | |
| AGATCAAGGATTTACTTTCT+TGG | - | chr3.1:59435403-59435422 | MS.gene039953:intron | 30.0% | |
| AGCACCAATTAAGCATATTA+AGG | + | chr3.1:59436047-59436066 | None:intergenic | 30.0% | |
| ATATCTGATACGTCTCAAAT+AGG | - | chr3.1:59436307-59436326 | MS.gene039953:intron | 30.0% | |
| ATCAAGGATTTACTTTCTTG+GGG | - | chr3.1:59435405-59435424 | MS.gene039953:intron | 30.0% | |
| ATGTATTGTAACGTACCATT+TGG | - | chr3.1:59435360-59435379 | MS.gene039953:intron | 30.0% | |
| CAAAACACGTTAGAATGTTT+CGG | - | chr3.1:59436512-59436531 | MS.gene039953:intron | 30.0% | |
| CGAGTTTGATAAAATCAAGA+TGG | - | chr3.1:59437245-59437264 | MS.gene039953:intron | 30.0% | |
| CTTTCAAAAATGAGTGCAAA+GGG | + | chr3.1:59433056-59433075 | None:intergenic | 30.0% | |
| GAATAGAAAAGGTGAATTTG+TGG | + | chr3.1:59435759-59435778 | None:intergenic | 30.0% | |
| GATCAAGGATTTACTTTCTT+GGG | - | chr3.1:59435404-59435423 | MS.gene039953:intron | 30.0% | |
| GTGCCTAGTTTACAAAAATA+TGG | + | chr3.1:59436665-59436684 | None:intergenic | 30.0% | |
| TACAACTTTGCAGGAAAATT+AGG | - | chr3.1:59433497-59433516 | MS.gene039953:intron | 30.0% | |
| TAGACATCAGTTGAAGTAAT+TGG | + | chr3.1:59437509-59437528 | None:intergenic | 30.0% | |
| TATTAGGTTTAAACCCACTT+GGG | - | chr3.1:59434733-59434752 | MS.gene039953:CDS | 30.0% | |
| TCACGTTAATATAACTCAGT+TGG | - | chr3.1:59434063-59434082 | MS.gene039953:intron | 30.0% | |
| TGGCCTAAAATAATACCAAA+TGG | + | chr3.1:59435378-59435397 | None:intergenic | 30.0% | |
| TTATTAGGTTTAAACCCACT+TGG | - | chr3.1:59434732-59434751 | MS.gene039953:CDS | 30.0% | |
| TTTCAAAAATGAGTGCAAAG+GGG | + | chr3.1:59433055-59433074 | None:intergenic | 30.0% | |
| ! | AGGGTATTTGAGATTAATAG+AGG | + | chr3.1:59436173-59436192 | None:intergenic | 30.0% |
| ! | GGGTATTTGAGATTAATAGA+GGG | + | chr3.1:59436172-59436191 | None:intergenic | 30.0% |
| ! | GTCATCTTTCTTCATTTTAC+AGG | - | chr3.1:59435875-59435894 | MS.gene039953:intron | 30.0% |
| ! | TGATTTTATCAAACTCGTGA+TGG | + | chr3.1:59437242-59437261 | None:intergenic | 30.0% |
| ! | TTCGGGTTATATAATTCGAA+CGG | - | chr3.1:59436467-59436486 | MS.gene039953:intron | 30.0% |
| !! | AAACGACACTCATTTTGAAA+CGG | - | chr3.1:59435199-59435218 | MS.gene039953:intron | 30.0% |
| !! | ATTGATAACTAGCTCTACAT+AGG | + | chr3.1:59433592-59433611 | None:intergenic | 30.0% |
| !! | TTACTGATTCACTTTGTGTT+TGG | + | chr3.1:59435270-59435289 | None:intergenic | 30.0% |
| !!! | ATTGCGTGTCCTATTTTTTT+CGG | - | chr3.1:59436449-59436468 | MS.gene039953:intron | 30.0% |
| !!! | CGGATTTTAGAATCTGAATA+GGG | - | chr3.1:59436532-59436551 | MS.gene039953:intron | 30.0% |
| !!! | CTGTTTTTGGAGAATAGAAA+AGG | + | chr3.1:59435770-59435789 | None:intergenic | 30.0% |
| !!! | TCGGATTTTAGAATCTGAAT+AGG | - | chr3.1:59436531-59436550 | MS.gene039953:intron | 30.0% |
| !!! | TTCAAAATGAGTGTCGTTTT+AGG | + | chr3.1:59435198-59435217 | None:intergenic | 30.0% |
| AACTTGGATTCCATGTAGTT+GGG | - | chr3.1:59433143-59433162 | MS.gene039953:intron | 35.0% | |
| AAGTCTAAACTCAATCTCCT+TGG | + | chr3.1:59436238-59436257 | None:intergenic | 35.0% | |
| AAGTGATGATCATACAAAGG+GGG | + | chr3.1:59437088-59437107 | None:intergenic | 35.0% | |
| AATAAGTATATCCCGTTGTC+GGG | + | chr3.1:59433386-59433405 | None:intergenic | 35.0% | |
| AATTAGGCCAAAGATGACAA+TGG | - | chr3.1:59433513-59433532 | MS.gene039953:intron | 35.0% | |
| ACAGCTACTTCATTTGGAAA+AGG | + | chr3.1:59436593-59436612 | None:intergenic | 35.0% | |
| AGGAACACTCTTTCTAATGA+TGG | - | chr3.1:59435839-59435858 | MS.gene039953:intron | 35.0% | |
| AGGACACGCAATAAATCAAT+AGG | + | chr3.1:59436441-59436460 | None:intergenic | 35.0% | |
| ATGATCATCACTTGTGCTTT+AGG | - | chr3.1:59437095-59437114 | MS.gene039953:intron | 35.0% | |
| ATTAGGCCAAAGATGACAAT+GGG | - | chr3.1:59433514-59433533 | MS.gene039953:intron | 35.0% | |
| CAAGTGATGATCATACAAAG+GGG | + | chr3.1:59437089-59437108 | None:intergenic | 35.0% | |
| CAATAAGTATATCCCGTTGT+CGG | + | chr3.1:59433387-59433406 | None:intergenic | 35.0% | |
| CACAAGTGATGATCATACAA+AGG | + | chr3.1:59437091-59437110 | None:intergenic | 35.0% | |
| CCAAAAACAGCACATAATTC+TGG | - | chr3.1:59435780-59435799 | MS.gene039953:intron | 35.0% | |
| CCTTTCAAAAATGAGTGCAA+AGG | + | chr3.1:59433057-59433076 | None:intergenic | 35.0% | |
| CTGCAAAGTTGTAAGAAAAG+TGG | + | chr3.1:59433490-59433509 | None:intergenic | 35.0% | |
| GAAGCATAGCAAAAGTGATT+GGG | - | chr3.1:59435685-59435704 | MS.gene039953:intron | 35.0% | |
| GAATCAAATATGAGACCATG+AGG | + | chr3.1:59434801-59434820 | None:intergenic | 35.0% | |
| GACGTATCAGATATTAACTG+TGG | + | chr3.1:59436301-59436320 | None:intergenic | 35.0% | |
| GGAACACTCTTTCTAATGAT+GGG | - | chr3.1:59435840-59435859 | MS.gene039953:intron | 35.0% | |
| GGACACGCAATAAATCAATA+GGG | + | chr3.1:59436440-59436459 | None:intergenic | 35.0% | |
| GTAAATCCTTGATCTATCAC+TGG | + | chr3.1:59435398-59435417 | None:intergenic | 35.0% | |
| GTCTCATATTTGATTCTCTC+TGG | - | chr3.1:59434805-59434824 | MS.gene039953:intron | 35.0% | |
| TAACTTGGATTCCATGTAGT+TGG | - | chr3.1:59433142-59433161 | MS.gene039953:intron | 35.0% | |
| TAGTGATCATCACTTGTGTT+CGG | - | chr3.1:59437200-59437219 | MS.gene039953:intron | 35.0% | |
| TTCAAAAATGAGTGCAAAGG+GGG | + | chr3.1:59433054-59433073 | None:intergenic | 35.0% | |
| TTCACAACATGACAGACAAA+TGG | - | chr3.1:59436256-59436275 | MS.gene039953:intron | 35.0% | |
| TTTCAGGGAATAATTACCTC+AGG | - | chr3.1:59436996-59437015 | MS.gene039953:intron | 35.0% | |
| ! | CACTTTTCTTACAACTTTGC+AGG | - | chr3.1:59433488-59433507 | MS.gene039953:intron | 35.0% |
| ! | CGAAACATTCTAACGTGTTT+TGG | + | chr3.1:59436514-59436533 | None:intergenic | 35.0% |
| ! | GTAGTGTGCAGAGTATTAAT+TGG | + | chr3.1:59435068-59435087 | None:intergenic | 35.0% |
| ! | TGTGCAGAGTATTAATTGGA+GGG | + | chr3.1:59435064-59435083 | None:intergenic | 35.0% |
| ! | TTTTGCATAGGGTCATAAGA+GGG | + | chr3.1:59434478-59434497 | None:intergenic | 35.0% |
| !! | AACATTCTAACGTGTTTTGG+AGG | + | chr3.1:59436511-59436530 | None:intergenic | 35.0% |
| !! | AAGCGACACTCATTTTGAAA+CGG | + | chr3.1:59434963-59434982 | None:intergenic | 35.0% |
| !! | CCTTTGCACTCATTTTTGAA+AGG | - | chr3.1:59433054-59433073 | MS.gene039953:intron | 35.0% |
| !!! | CCAGAATTATGTGCTGTTTT+TGG | + | chr3.1:59435783-59435802 | None:intergenic | 35.0% |
| !!! | CGTGTTTTGGAGGTTTTTAT+AGG | + | chr3.1:59436501-59436520 | None:intergenic | 35.0% |
| !!! | TTGCGTGTCCTATTTTTTTC+GGG | - | chr3.1:59436450-59436469 | MS.gene039953:intron | 35.0% |
| AAGACACCCATTGTCATCTT+TGG | + | chr3.1:59433523-59433542 | None:intergenic | 40.0% | |
| ACACGCAAACTCTCAAACAT+TGG | - | chr3.1:59435811-59435830 | MS.gene039953:intron | 40.0% | |
| ACTATATGGTCCTCTCTACA+CGG | - | chr3.1:59436144-59436163 | MS.gene039953:intron | 40.0% | |
| AGCGTATTATGTGCAAGGAT+TGG | - | chr3.1:59437022-59437041 | MS.gene039953:intron | 40.0% | |
| ATAGACCCACTGCAATAATC+AGG | + | chr3.1:59437391-59437410 | None:intergenic | 40.0% | |
| ATTCATTCCCATGTTGAGAC+TGG | + | chr3.1:59432982-59433001 | None:intergenic | 40.0% | |
| CAATGTTTCCAAGGAGTGAA+TGG | - | chr3.1:59433353-59433372 | MS.gene039953:CDS | 40.0% | |
| CACATAATACGCTATTCCTG+AGG | + | chr3.1:59437015-59437034 | None:intergenic | 40.0% | |
| CACGCAAACTCTCAAACATT+GGG | - | chr3.1:59435812-59435831 | MS.gene039953:intron | 40.0% | |
| CACGCAATAAATCAATAGGG+TGG | + | chr3.1:59436437-59436456 | None:intergenic | 40.0% | |
| CGAAGCATAGCAAAAGTGAT+TGG | - | chr3.1:59435684-59435703 | MS.gene039953:intron | 40.0% | |
| CTTGGGGATGCAATATACAT+CGG | - | chr3.1:59435421-59435440 | MS.gene039953:intron | 40.0% | |
| GAAAATTACGGCTAGCACAA+AGG | + | chr3.1:59435489-59435508 | None:intergenic | 40.0% | |
| GAACACAAGTGATGATCACT+AGG | + | chr3.1:59437201-59437220 | None:intergenic | 40.0% | |
| GACATTAGTAACCTTTGCAG+GGG | - | chr3.1:59435707-59435726 | MS.gene039953:intron | 40.0% | |
| GGAATAGCGTATTATGTGCA+AGG | - | chr3.1:59437017-59437036 | MS.gene039953:intron | 40.0% | |
| GGACATTAGTAACCTTTGCA+GGG | - | chr3.1:59435706-59435725 | MS.gene039953:intron | 40.0% | |
| GGTTGGGACTTTAGACTATA+TGG | - | chr3.1:59436130-59436149 | MS.gene039953:intron | 40.0% | |
| GTTGGGATACTCTACATGTA+TGG | - | chr3.1:59433160-59433179 | MS.gene039953:intron | 40.0% | |
| TAACGGTGGCACTTCAATTT+GGG | - | chr3.1:59432928-59432947 | MS.gene039953:CDS | 40.0% | |
| TAGACCCACTGCAATAATCA+GGG | + | chr3.1:59437390-59437409 | None:intergenic | 40.0% | |
| TCAAATAGGATGACCTCCAA+CGG | - | chr3.1:59436321-59436340 | MS.gene039953:intron | 40.0% | |
| TTAACGGTGGCACTTCAATT+TGG | - | chr3.1:59432927-59432946 | MS.gene039953:CDS | 40.0% | |
| TTAGAAGTTACCTTCCCAAG+TGG | + | chr3.1:59437145-59437164 | None:intergenic | 40.0% | |
| TTTAGGCCAGTGATAGATCA+AGG | - | chr3.1:59435389-59435408 | MS.gene039953:intron | 40.0% | |
| TTTGAGTGTGTTCATCCTCA+TGG | - | chr3.1:59434783-59434802 | MS.gene039953:intron | 40.0% | |
| ! | AAACGGAGGGAGTATAATGT+GGG | + | chr3.1:59434946-59434965 | None:intergenic | 40.0% |
| ! | AGGAGCATACATATTCTCCA+TGG | - | chr3.1:59432956-59432975 | MS.gene039953:CDS | 40.0% |
| ! | CTTTTGCATAGGGTCATAAG+AGG | + | chr3.1:59434479-59434498 | None:intergenic | 40.0% |
| ! | GGATTGGTATTTCAAAGCAG+AGG | - | chr3.1:59437038-59437057 | MS.gene039953:intron | 40.0% |
| ! | GTGTGCAGAGTATTAATTGG+AGG | + | chr3.1:59435065-59435084 | None:intergenic | 40.0% |
| ! | TCAGTTTGCTTCATTGCAAC+TGG | + | chr3.1:59437476-59437495 | None:intergenic | 40.0% |
| ! | TGTAGAGTATCCCAACTACA+TGG | + | chr3.1:59433156-59433175 | None:intergenic | 40.0% |
| ! | TTGTGCTAGCCGTAATTTTC+AGG | - | chr3.1:59435489-59435508 | MS.gene039953:intron | 40.0% |
| !! | CTTTCTAATGATGGGTTGTG+TGG | - | chr3.1:59435848-59435867 | MS.gene039953:intron | 40.0% |
| !! | GATAATGGCGCTTGCATTTT+TGG | - | chr3.1:59433549-59433568 | MS.gene039953:intron | 40.0% |
| !! | GTTGATAGTGACATTTCTGC+TGG | + | chr3.1:59436025-59436044 | None:intergenic | 40.0% |
| !!! | AGTTTTAAGTCAACACCACG+AGG | + | chr3.1:59434763-59434782 | None:intergenic | 40.0% |
| !!! | GACACTCATTTTGAAACGGA+GGG | + | chr3.1:59435222-59435203 | None:intergenic | 40.0% |
| AAATAGGATGACCTCCAACG+GGG | - | chr3.1:59436323-59436342 | MS.gene039953:intron | 45.0% | |
| AATGGTGAGAATCCCGACAA+CGG | - | chr3.1:59433371-59433390 | MS.gene039953:CDS | 45.0% | |
| ACCAGACAGTGACAGGATTT+AGG | - | chr3.1:59436633-59436652 | MS.gene039953:intron | 45.0% | |
| ACTCTCAAACATTGGGTCTC+AGG | - | chr3.1:59435819-59435838 | MS.gene039953:intron | 45.0% | |
| AGGTTTAAACCCACTTGGGT+TGG | - | chr3.1:59434737-59434756 | MS.gene039953:CDS | 45.0% | |
| AGTGCCACCGTTAACACATA+AGG | + | chr3.1:59432921-59432940 | None:intergenic | 45.0% | |
| CAAATAGGATGACCTCCAAC+GGG | - | chr3.1:59436322-59436341 | MS.gene039953:intron | 45.0% | |
| GATTCTCACCATTCACTCCT+TGG | + | chr3.1:59433364-59433383 | None:intergenic | 45.0% | |
| GCTAGCACAAAGGTAACAGA+AGG | + | chr3.1:59435479-59435498 | None:intergenic | 45.0% | |
| GGGACATTAGTAACCTTTGC+AGG | - | chr3.1:59435705-59435724 | MS.gene039953:intron | 45.0% | |
| GGGTCTATATTCTGTGGTGT+GGG | - | chr3.1:59437403-59437422 | MS.gene039953:CDS | 45.0% | |
| GGTCTATATTCTGTGGTGTG+GGG | - | chr3.1:59437404-59437423 | MS.gene039953:CDS | 45.0% | |
| TGACAATGGGTGTCTTTGTG+CGG | - | chr3.1:59433527-59433546 | MS.gene039953:intron | 45.0% | |
| TGCAGTGGGTCTATATTCTG+TGG | - | chr3.1:59437397-59437416 | MS.gene039953:CDS | 45.0% | |
| TGCTATGCAAACTAGTGTGG+TGG | - | chr3.1:59436063-59436082 | MS.gene039953:intron | 45.0% | |
| TGCTTCATTGCAACTGGTGA+TGG | + | chr3.1:59437470-59437489 | None:intergenic | 45.0% | |
| TGGGTCTATATTCTGTGGTG+TGG | - | chr3.1:59437402-59437421 | MS.gene039953:CDS | 45.0% | |
| TTGAGGTTTGGGCTATTGGT+TGG | - | chr3.1:59436113-59436132 | MS.gene039953:intron | 45.0% | |
| TTTGCAGAGCAAGTCCACTT+GGG | - | chr3.1:59437128-59437147 | MS.gene039953:intron | 45.0% | |
| ! | AGATGGTTCTGTCACAGACA+CGG | - | chr3.1:59437262-59437281 | MS.gene039953:intron | 45.0% |
| ! | AGTGGACTTGCTCTGCAAAA+AGG | + | chr3.1:59437127-59437146 | None:intergenic | 45.0% |
| ! | GAAACGGAGGGAGTATAATG+TGG | + | chr3.1:59434947-59434966 | None:intergenic | 45.0% |
| ! | GACTTGCTCTGCAAAAAGGA+AGG | + | chr3.1:59437123-59437142 | None:intergenic | 45.0% |
| ! | GCACTTCAATTTGGGTTTGC+AGG | - | chr3.1:59432936-59432955 | MS.gene039953:CDS | 45.0% |
| ! | TGAGGTTTGGGCTATTGGTT+GGG | - | chr3.1:59436114-59436133 | MS.gene039953:intron | 45.0% |
| ! | TTTTGCAGAGCAAGTCCACT+TGG | - | chr3.1:59437127-59437146 | MS.gene039953:intron | 45.0% |
| !! | TAATGATGGGTTGTGTGGCT+TGG | - | chr3.1:59435853-59435872 | MS.gene039953:intron | 45.0% |
| !! | TCACTCTGGTCTTGAGGTTT+GGG | - | chr3.1:59436102-59436121 | MS.gene039953:intron | 45.0% |
| !! | TCTTGGTAACGTGTGTCCTA+AGG | - | chr3.1:59435553-59435572 | MS.gene039953:intron | 45.0% |
| !! | TGGTGCTATGCAAACTAGTG+TGG | - | chr3.1:59436060-59436079 | MS.gene039953:intron | 45.0% |
| !! | TTCATTGCAACTGGTGATGG+TGG | + | chr3.1:59437467-59437486 | None:intergenic | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | - | chr3.1:59435202-59435221 | MS.gene039953:intron | 45.0% |
| !!! | CGACACTCATTTTGAAACGG+AGG | + | chr3.1:59435221-59435202 | None:intergenic | 45.0% |
| !! | AATATTACATTATATATATA+TGG | - | chr3.1:59434090-59434109 | MS.gene039953:intron | 5.0% |
| AAATGAGTGCAAAGGGGGCA+AGG | + | chr3.1:59433049-59433068 | None:intergenic | 50.0% | |
| AATGAGTGCAAAGGGGGCAA+GGG | + | chr3.1:59433048-59433067 | None:intergenic | 50.0% | |
| ATCCTGTCACTGTCTGGTGT+TGG | + | chr3.1:59436631-59436650 | None:intergenic | 50.0% | |
| ATGGTGAGAATCCCGACAAC+GGG | - | chr3.1:59433372-59433391 | MS.gene039953:CDS | 50.0% | |
| ATTTGCAATAGGCTCCCCGT+TGG | + | chr3.1:59436340-59436359 | None:intergenic | 50.0% | |
| CATCATCAATGCCCCTGCAA+AGG | + | chr3.1:59435721-59435740 | None:intergenic | 50.0% | |
| GAGGGACTCAATTAGACGCT+TGG | + | chr3.1:59434460-59434479 | None:intergenic | 50.0% | |
| GCCTAAATCCTGTCACTGTC+TGG | + | chr3.1:59436637-59436656 | None:intergenic | 50.0% | |
| GGAGCCCTGATTATTGCAGT+GGG | - | chr3.1:59437383-59437402 | MS.gene039953:CDS | 50.0% | |
| GGGTGTCTTTGTGCGGATAA+TGG | - | chr3.1:59433534-59433553 | MS.gene039953:intron | 50.0% | |
| GGTCTTGAGGTTTGGGCTAT+TGG | - | chr3.1:59436109-59436128 | MS.gene039953:intron | 50.0% | |
| TCCATGGCCAGTCTCAACAT+GGG | - | chr3.1:59432972-59432991 | MS.gene039953:CDS | 50.0% | |
| TGGAGCCCTGATTATTGCAG+TGG | - | chr3.1:59437382-59437401 | MS.gene039953:CDS | 50.0% | |
| TTCATTGCTGAGCGTCACTC+TGG | - | chr3.1:59436088-59436107 | MS.gene039953:intron | 50.0% | |
| ! | AGGGCCTTATGTGTTAACGG+TGG | - | chr3.1:59432914-59432933 | MS.gene039953:CDS | 50.0% |
| ! | GGCAGGGCCTTATGTGTTAA+CGG | - | chr3.1:59432911-59432930 | MS.gene039953:CDS | 50.0% |
| !! | ATAGAGGGTACCGTGTAGAG+AGG | + | chr3.1:59436157-59436176 | None:intergenic | 50.0% |
| !! | GTCACTCTGGTCTTGAGGTT+TGG | - | chr3.1:59436101-59436120 | MS.gene039953:intron | 50.0% |
| CACCAACACCAGACAGTGAC+AGG | - | chr3.1:59436626-59436645 | MS.gene039953:intron | 55.0% | |
| CAGAGCAAGTCCACTTGGGA+AGG | - | chr3.1:59437132-59437151 | MS.gene039953:intron | 55.0% | |
| CTCCATGGCCAGTCTCAACA+TGG | - | chr3.1:59432971-59432990 | MS.gene039953:CDS | 55.0% | |
| ! | TCCCATGTTGAGACTGGCCA+TGG | + | chr3.1:59432976-59432995 | None:intergenic | 55.0% |
| !! | GCAACTGGTGATGGTGGCAT+AGG | + | chr3.1:59437461-59437480 | None:intergenic | 55.0% |
| !! | TGAGCGTCACTCTGGTCTTG+AGG | - | chr3.1:59436096-59436115 | MS.gene039953:intron | 55.0% |
| ACCACGAGGCCAACCCAAGT+GGG | + | chr3.1:59434749-59434768 | None:intergenic | 60.0% | |
| TGCAATAGGCTCCCCGTTGG+AGG | + | chr3.1:59436337-59436356 | None:intergenic | 60.0% | |
| CACCACGAGGCCAACCCAAG+TGG | + | chr3.1:59434750-59434769 | None:intergenic | 65.0% | |
| !! | ACCCACTTGGGTTGGCCTCG+TGG | - | chr3.1:59434745-59434764 | MS.gene039953:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 59432903 | 59437529 | 59432903 | ID=MS.gene039953 |
| chr3.1 | mRNA | 59432903 | 59437529 | 59432903 | ID=MS.gene039953.t1;Parent=MS.gene039953 |
| chr3.1 | exon | 59437357 | 59437529 | 59437357 | ID=MS.gene039953.t1.exon1;Parent=MS.gene039953.t1 |
| chr3.1 | CDS | 59437357 | 59437529 | 59437357 | ID=cds.MS.gene039953.t1;Parent=MS.gene039953.t1 |
| chr3.1 | exon | 59436860 | 59436922 | 59436860 | ID=MS.gene039953.t1.exon2;Parent=MS.gene039953.t1 |
| chr3.1 | CDS | 59436860 | 59436922 | 59436860 | ID=cds.MS.gene039953.t1;Parent=MS.gene039953.t1 |
| chr3.1 | exon | 59434922 | 59435038 | 59434922 | ID=MS.gene039953.t1.exon3;Parent=MS.gene039953.t1 |
| chr3.1 | CDS | 59434922 | 59435038 | 59434922 | ID=cds.MS.gene039953.t1;Parent=MS.gene039953.t1 |
| chr3.1 | exon | 59434536 | 59434776 | 59434536 | ID=MS.gene039953.t1.exon4;Parent=MS.gene039953.t1 |
| chr3.1 | CDS | 59434536 | 59434776 | 59434536 | ID=cds.MS.gene039953.t1;Parent=MS.gene039953.t1 |
| chr3.1 | exon | 59434267 | 59434431 | 59434267 | ID=MS.gene039953.t1.exon5;Parent=MS.gene039953.t1 |
| chr3.1 | CDS | 59434267 | 59434431 | 59434267 | ID=cds.MS.gene039953.t1;Parent=MS.gene039953.t1 |
| chr3.1 | exon | 59433279 | 59433430 | 59433279 | ID=MS.gene039953.t1.exon6;Parent=MS.gene039953.t1 |
| chr3.1 | CDS | 59433279 | 59433430 | 59433279 | ID=cds.MS.gene039953.t1;Parent=MS.gene039953.t1 |
| chr3.1 | exon | 59432903 | 59433056 | 59432903 | ID=MS.gene039953.t1.exon7;Parent=MS.gene039953.t1 |
| chr3.1 | CDS | 59432903 | 59433056 | 59432903 | ID=cds.MS.gene039953.t1;Parent=MS.gene039953.t1 |
| Gene Sequence |
| Protein sequence |
